miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 93.7 bits (47), Expect = 6e-19
Identities = 93/109 (85%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 37 atgtgacacattatagtacaacgaatgtggatagaaatatgtgtagattcgtagtactag 96
|||||||||||| ||||||||||||| |||| ||| ||||| ||||||||||||||||
Sbjct: 43 atgtgacacattctagtacaacgaatctggacagaggtatgtccagattcgtagtactag 102
Query: 97 gatntgtcgcatcgagt-----nttggttttttatgggacggagggagt 140
||| |||| |||| ||| ||||||||||||||||||||||||||
Sbjct: 103 gatgtgtcacatccagtactaggttggttttttatgggacggagggagt 151
>RF00906;MIR1122;AACV01010622.1/23023-23178 39947:Oryza sativa
Japonica Group
Length = 156
Score = 61.9 bits (31), Expect = 2e-09
Identities = 89/109 (81%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 37 atgtgacacattatagtacaacgaatgtggatagaaatatgtgtagattcgtagtactag 96
|||||||| ||| ||||| || |||| |||||||| |||||| ||||||||||| ||||
Sbjct: 43 atgtgacatattctagtataatgaatctggatagagatatgtccagattcgtagtcctag 102
Query: 97 gatntgtcgcatcgagt-----nttggttttttatgggacggagggagt 140
||| |||| |||| || ||| ||||||||||||||||||||||
Sbjct: 103 gatgtgtcacatccggtacgaggttgattttttatgggacggagggagt 151
>RF00906;MIR1122;AACV01012191.1/7968-7814 39947:Oryza sativa
Japonica Group
Length = 155
Score = 61.9 bits (31), Expect = 2e-09
Identities = 56/65 (86%), Gaps = 5/65 (7%)
Strand = Plus / Minus
Query: 81 agattcgtagtactaggatntgtcgcatcgagtnt-----tggttttttatgggacggag 135
||||||||||||||||||| |||| |||| ||| | ||||||||||||||||||||
Sbjct: 70 agattcgtagtactaggatgtgtcacatccagtattaggctggttttttatgggacggag 11
Query: 136 ggagt 140
|||||
Sbjct: 10 ggagt 6
Score = 44.1 bits (22), Expect = 5e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 81 agattcgtagtactaggatntgtcgcatc 109
||||||||||||||||||| |||| ||||
Sbjct: 86 agattcgtagtactaggatgtgtcacatc 114
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 60.0 bits (30), Expect = 8e-09
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 37 atgtgacacattatagtacaacgaatgtggatagaaatatgtgtagattcgtagtactag 96
||||||||||| ||||||||||||| |||| || ||| ||| |||||||| |||||||
Sbjct: 43 atgtgacacatcctagtacaacgaatctggacagtaatttgtccagattcgttgtactag 102
Query: 97 gatntgtcgcatc 109
||| |||| ||||
Sbjct: 103 gatgtgtcacatc 115
>RF00906;MIR1122;AAAA02003707.1/8900-8747 39946:Oryza sativa Indica
Group
Length = 154
Score = 60.0 bits (30), Expect = 8e-09
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 37 atgtgacacattatagtacaacgaatgtggatagaaatatgtgtagattcgtagtactag 96
|||||||| ||| |||||| | |||| |||||| | |||||| ||||||||||||||||
Sbjct: 42 atgtgacatattctagtacgatgaatttggatatatatatgtccagattcgtagtactag 101
Query: 97 gatntgtcgcatc 109
||| |||| ||||
Sbjct: 102 gatgtgtcacatc 114
>RF00906;MIR1122;AAAA02027770.1/12261-12396 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 55/65 (84%), Gaps = 5/65 (7%)
Strand = Plus / Plus
Query: 81 agattcgtagtactaggatntgtcgcatcgagt-----nttggttttttatgggacggag 135
||||||||||||||||||| |||| |||| ||| |||||||| ||||||||||||
Sbjct: 67 agattcgtagtactaggatatgtcacatccagtactaggttggttttgtatgggacggag 126
Query: 136 ggagt 140
|||||
Sbjct: 127 ggagt 131
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 atgtgacacattatagtacaacgaatgtgga 67
|||||||||||||||||||||||||| ||||
Sbjct: 115 atgtgacacattatagtacaacgaatctgga 85
>RF00906;MIR1122;AAAA02026860.1/4609-4722 39946:Oryza sativa Indica
Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 84 ttggttttttatgggacggagggagt 109
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 119 ttttttatgggacggagggagt 140
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AC229932.1/30140-30028 63629:Oryza minuta
Length = 113
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 83 ttggttttttatgggacggagggagt 108
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 119 ttttttatgggacggagggagt 140
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AP008210.1/21918444-21918599 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 126 ttggttttttatgggacggagggagt 151
>RF00906;MIR1122;AACV01025590.1/274-429 39947:Oryza sativa Japonica
Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 126 ttggttttttatgggacggagggagt 151
>RF00906;MIR1122;AC134925.4/86794-86934 39947:Oryza sativa Japonica
Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 111 ttggttttttatgggacggagggagt 136
>RF00906;MIR1122;AP008218.1/22974465-22974372 39947:Oryza sativa
Japonica Group
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 64 ttggttttttatgggacggagggagt 89
>RF00906;MIR1122;AAAA02011008.1/11238-11369 39946:Oryza sativa
Indica Group
Length = 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 102 ttggttttttatgggacggagggagt 127
>RF00906;MIR1122;AAAA02036878.1/803-666 39946:Oryza sativa Indica
Group
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 108 ttggttttttatgggacggagggagt 133
>RF00906;MIR1122;AACV01005006.1/10159-10274 39947:Oryza sativa
Japonica Group
Length = 116
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 86 ttggttttttatgggacggagggagt 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02031253.1/370-507 39946:Oryza sativa Indica
Group
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 108 ttggttttttatgggacggagggagt 133
>RF00906;MIR1122;AP008209.1/18198148-18198281 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 104 ttggttttttatgggacggagggagt 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AP004457.2/96948-96835 39947:Oryza sativa Japonica
Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 84 ttggttttttatgggacggagggagt 109
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 119 ttttttatgggacggagggagt 140
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02035060.1/17205-17050 39946:Oryza sativa
Indica Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 126 ttggttttttatgggacggagggagt 151
>RF00906;MIR1122;AAAA02010090.1/14271-14425 39946:Oryza sativa
Indica Group
Length = 155
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 125 ttggttttttatgggacggagggagt 150
>RF00906;MIR1122;AAAA02010900.1/7833-7673 39946:Oryza sativa Indica
Group
Length = 161
Score = 52.0 bits (26), Expect = 2e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 40 tgacacattatagtacaacgaatgtggatagaaatatgtgtagattcgtagtactaggat 99
|||||||| |||||| |||||| |||| ||| |||||| |||||| ||||||||||||
Sbjct: 112 tgacacatcctagtactacgaatctggacagatatatgtccagattcatagtactaggat 53
Query: 100 ntgtc 104
||||
Sbjct: 52 atgtc 48
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 131 ttggttttttatgggacggagggagt 156
>RF00906;MIR1122;AACV01006502.1/3843-3983 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||||||||||||
Sbjct: 111 ttggttttttatgggacggagggagt 136
>RF00906;MIR1122;AP008212.1/202637-202758 39947:Oryza sativa
Japonica Group
Length = 122
Score = 50.1 bits (25), Expect = 8e-06
Identities = 56/67 (83%), Gaps = 5/67 (7%)
Strand = Plus / Plus
Query: 80 tagattcgtagtactaggatntgtcgcatcgagt-----nttggttttttatgggacgga 134
|||||||||||||||||||| |||| |||| || |||||||| |||||||||||
Sbjct: 52 tagattcgtagtactaggatgtgtcacatccggtactaggttggttttctatgggacgga 111
Query: 135 gggagtg 141
|||||||
Sbjct: 112 gggagtg 118
>RF00906;MIR1122;AAAA02010127.1/111408-111296 39946:Oryza sativa
Indica Group
Length = 113
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 116 tggttttttatgggacggagggagt 140
|||||||||||||||||||||||||
Sbjct: 84 tggttttttatgggacggagggagt 108
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 119 ttttttatgggacggagggagt 140
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AP008208.1/277556-277420 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 117 ggttttttatgggacggagggagt 140
||||||||||||||||||||||||
Sbjct: 29 ggttttttatgggacggagggagt 6
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 75 atgtgtagattcgtagtactaggatntgtcgcatc 109
|||| |||||||||||||||||||| |||| ||||
Sbjct: 82 atgtctagattcgtagtactaggatgtgtcccatc 116
>RF00906;MIR1122;AP008209.1/35560975-35561101 39947:Oryza sativa
Japonica Group
Length = 127
Score = 48.1 bits (24), Expect = 3e-05
Identities = 55/66 (83%), Gaps = 5/66 (7%)
Strand = Plus / Minus
Query: 80 tagattcgtagtactaggatntgtcgcatcgagtn-----ttggttttttatgggacgga 134
|||||||||||||||||||| |||| |||| || || |||||||||||||||||
Sbjct: 71 tagattcgtagtactaggatgtgtcacatccggtcctagattcgttttttatgggacgga 12
Query: 135 gggagt 140
||||||
Sbjct: 11 gggagt 6
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 75 atgtgtagattcgtagtactaggatntgtcgcatc 109
|||| |||||||||||||||||||| |||| ||||
Sbjct: 82 atgtctagattcgtagtactaggatgtgtcccatc 116
>RF00906;MIR1122;AP008217.1/4273192-4273317 39947:Oryza sativa
Japonica Group
Length = 126
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 41 gacacattatagtacaacgaatgtggat 68
|||||||| |||||||||||||||||||
Sbjct: 26 gacacattctagtacaacgaatgtggat 53
>RF00906;MIR1122;AAAA02014383.1/51051-51164 39946:Oryza sativa
Indica Group
Length = 114
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 ggttttttatgggacggagggagt 140
||||||||||||||||||||||||
Sbjct: 86 ggttttttatgggacggagggagt 109
>RF00906;MIR1122;AACV01003164.1/19294-19158 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 ggttttttatgggacggagggagt 140
||||||||||||||||||||||||
Sbjct: 109 ggttttttatgggacggagggagt 132
>RF00906;MIR1122;AP004012.3/83493-83639 39947:Oryza sativa Japonica
Group
Length = 147
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 ggttttttatgggacggagggagt 140
||||||||||||||||||||||||
Sbjct: 119 ggttttttatgggacggagggagt 142
>RF00906;MIR1122;AP006067.3/111180-111270 39947:Oryza sativa
Japonica Group
Length = 91
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 117 ggttttttatgggacggagggagt 140
||||||||||||||||||||||||
Sbjct: 29 ggttttttatgggacggagggagt 6
>RF00906;MIR1122;AC037426.12/45307-45458 39947:Oryza sativa Japonica
Group
Length = 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02018390.1/16986-17138 39946:Oryza sativa
Indica Group
Length = 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 atgtgacacattatagtacaacgaatgtgga 67
||||||||| |||||||||||||||| ||||
Sbjct: 115 atgtgacactttatagtacaacgaatctgga 85
>RF00906;MIR1122;AP008214.1/666276-666163 39947:Oryza sativa
Japonica Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02017131.1/7123-7250 39946:Oryza sativa Indica
Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AP004566.3/93541-93654 39947:Oryza sativa Japonica
Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 87 gttttttatgggacggagggagt 109
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa Indica
Group
Length = 149
Score = 46.1 bits (23), Expect = 1e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 80 tagattcgtagtactaggatntgtcgcatc 109
|||||||||||||||||||| |||| ||||
Sbjct: 71 tagattcgtagtactaggatatgtcccatc 42
>RF00906;MIR1122;AP008209.1/34072110-34071977 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 107 gttttttatgggacggagggagt 129
>RF00906;MIR1122;AACV01012113.1/55186-55058 39947:Oryza sativa
Japonica Group
Length = 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 102 gttttttatgggacggagggagt 124
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 119 ttttttatgggacggagggagt 140
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 atgtgacacattatagtacaacgaatgtgga 67
|||||||||||| ||||||||||||| ||||
Sbjct: 115 atgtgacacattctagtacaacgaatctgga 85
>RF00906;MIR1122;AAAA02028930.1/6053-6188 39946:Oryza sativa Indica
Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 51/61 (83%), Gaps = 5/61 (8%)
Strand = Plus / Plus
Query: 81 agattcgtagtactaggatntgtcgcatcgagtntt-----ggttttttatgggacggag 135
|||||||| |||||||||| |||| |||| ||| || |||||||||||||||||||
Sbjct: 67 agattcgttgtactaggatgtgtcacatccagtattagattggttttttatgggacggag 126
Query: 136 g 136
|
Sbjct: 127 g 127
>RF00906;MIR1122;AACV01013846.1/34700-34544 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 37 atgtgacacattatagtacaacgaatgtgga 67
||||||||| |||||||||||||||| ||||
Sbjct: 43 atgtgacactttatagtacaacgaatctgga 73
>RF00906;MIR1122;AP005416.3/143775-143639 39947:Oryza sativa
Japonica Group
Length = 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 73 atatgtgtagattcgtagtactaggatntgtcgcatcg 110
|||||| ||||||||||||| |||||| |||| |||||
Sbjct: 78 atatgtttagattcgtagtattaggatatgtcacatcg 41
>RF00906;MIR1122;AACV01016857.1/872-736 39947:Oryza sativa Japonica
Group
Length = 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 110 gttttttatgggacggagggagt 132
>RF00906;MIR1122;AACV01013467.1/37098-37256 39947:Oryza sativa
Japonica Group
Length = 159
Score = 46.1 bits (23), Expect = 1e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 80 tagattcgtagtactaggatntgtcgcatc 109
|||||||||||||||||||| |||| ||||
Sbjct: 71 tagattcgtagtactaggatgtgtcccatc 42
>RF00906;MIR1122;AP002483.1/24463-24606 39947:Oryza sativa Japonica
Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 117 gttttttatgggacggagggagt 139
>RF00906;MIR1122;AC133007.4/76186-76053 39947:Oryza sativa Japonica
Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AP008217.1/3396232-3396120 39947:Oryza sativa
Japonica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 86 gttttttatgggacggagggagt 108
>RF00906;MIR1122;AB206885.1/121-10 39947:Oryza sativa Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 85 gttttttatgggacggagggagt 107
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 115 ttggttttttatgggacggagg 136
||||||||||||||||||||||
Sbjct: 31 ttggttttttatgggacggagg 10
>RF00906;MIR1122;AC120991.3/108993-108909 39947:Oryza sativa
Japonica Group
Length = 85
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 58 gttttttatgggacggagggagt 80
>RF00906;MIR1122;AP008214.1/23959479-23959591 39947:Oryza sativa
Japonica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 86 gttttttatgggacggagggagt 108
>RF00906;MIR1122;AACV01016060.1/4048-4184 39947:Oryza sativa
Japonica Group
Length = 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 gttttttatgggacggagggagt 140
|||||||||||||||||||||||
Sbjct: 110 gttttttatgggacggagggagt 132
>RF00906;MIR1122;ABRL01001045.1/1775-1911 65489:Oryza barthii
Length = 137
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 tgacacattatagtacaacgaatgtggata 69
||||||||| ||||||||||||| ||||||
Sbjct: 47 tgacacattctagtacaacgaatctggata 76
>RF00906;MIR1122;AAAA02022804.1/34746-34633 39946:Oryza sativa
Indica Group
Length = 114
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 119 ttttttatgggacggagggagt 140
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||||||||||| |||||||
Sbjct: 84 ttggttttttatgggacgaagggagt 109
>RF00906;MIR1122;AAAA02027326.1/570-454 39946:Oryza sativa Indica
Group
Length = 117
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||| ||||||||||||
Sbjct: 87 ttggttttttatgagacggagggagt 112
>RF00906;MIR1122;AAAA02005552.1/15961-15806 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||||||||||| |||||||
Sbjct: 126 ttggttttttatgggacgaagggagt 151
>RF00906;MIR1122;AC104429.2/50540-50620 39947:Oryza sativa Japonica
Group
Length = 81
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||| |||||||||||||||
Sbjct: 51 ttggttttttttgggacggagggagt 76
>RF00906;MIR1122;AAAA02007310.1/1161-1273 39946:Oryza sativa Indica
Group
Length = 113
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 119 ttttttatgggacggagggagt 140
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AC092389.4/93429-93555 39947:Oryza sativa Japonica
Group
Length = 127
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 ttttttatgggacggagggagt 140
||||||||||||||||||||||
Sbjct: 101 ttttttatgggacggagggagt 122
>RF00906;MIR1122;AAAA02007985.1/61647-61567 39946:Oryza sativa
Indica Group
Length = 81
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||| |||||||||||||||
Sbjct: 31 ttggttttttttgggacggagggagt 6
>RF00906;MIR1122;AC217582.2/26328-26173 4537:Oryza punctata
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||| |||||||||||||||||
Sbjct: 126 ttggttttctatgggacggagggagt 151
>RF00906;MIR1122;AACV01014391.1/4590-4745 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||||||||| |||||||||
Sbjct: 126 ttggttttttatgggatggagggagt 151
>RF00906;MIR1122;AAAA02013022.1/7455-7611 39946:Oryza sativa Indica
Group
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||||||||||| |||||||
Sbjct: 127 ttggttttttatgggacgaagggagt 152
>RF00906;MIR1122;CR855173.1/25497-25408 4530:Oryza sativa (rice)
Length = 90
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||| |||||||||||||||
Sbjct: 60 ttggttttttgtgggacggagggagt 85
>RF00906;MIR1122;AAAA02016998.1/2818-2950 39946:Oryza sativa Indica
Group
Length = 133
Score = 44.1 bits (22), Expect = 5e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 80 tagattcgtagtactaggatntgtc 104
|||||||||||||||||||| ||||
Sbjct: 63 tagattcgtagtactaggatatgtc 87
>RF00906;MIR1122;AAAA02011336.1/16807-16694 39946:Oryza sativa
Indica Group
Length = 114
Score = 44.1 bits (22), Expect = 5e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 81 agattcgtagtactaggatntgtcgcatc 109
||||||||||||||||||| |||| ||||
Sbjct: 66 agattcgtagtactaggatgtgtcacatc 38
>RF00906;MIR1122;AAAA02003495.1/21560-21672 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 ttttttatgggacggagggagt 140
||||||||||||||||||||||
Sbjct: 87 ttttttatgggacggagggagt 108
>RF00906;MIR1122;AAAA02018982.1/10233-10100 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||| |||||||||||||||
Sbjct: 104 ttggttttttgtgggacggagggagt 129
>RF00906;MIR1122;AAAA02012853.1/6255-6365 39946:Oryza sativa Indica
Group
Length = 111
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 119 ttttttatgggacggagggagt 140
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 81 agattcgtagtactaggatntgtcgcatc 109
||||||||||||||||||| |||| ||||
Sbjct: 65 agattcgtagtactaggatgtgtcacatc 93
>RF00906;MIR1122;AACV01023857.1/20372-20486 39947:Oryza sativa
Japonica Group
Length = 115
Score = 44.1 bits (22), Expect = 5e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 81 agattcgtagtactaggatntgtcgcatc 109
||||||||||||||||||| |||| ||||
Sbjct: 67 agattcgtagtactaggatgtgtcccatc 95
>RF00906;MIR1122;AACV01005927.1/30178-30314 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||||||||| |||||||||
Sbjct: 107 ttggttttttatgggatggagggagt 132
>RF00906;MIR1122;AACV01014928.1/15280-15408 39947:Oryza sativa
Japonica Group
Length = 129
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagg 136
||||||||||||||||||||||
Sbjct: 99 ttggttttttatgggacggagg 120
>RF00906;MIR1122;AC097111.2/81392-81238 39947:Oryza sativa Japonica
Group
Length = 155
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||||||||||| |||||||
Sbjct: 125 ttggttttttatgggacgaagggagt 150
>RF00906;MIR1122;AP008218.1/23548296-23548451 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||||||| |||||||||||
Sbjct: 31 ttggttttttatggaacggagggagt 6
>RF00906;MIR1122;AP008209.1/128298-128150 39947:Oryza sativa
Japonica Group
Length = 149
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
|||||||||||||| |||||||||||
Sbjct: 119 ttggttttttatggaacggagggagt 144
>RF00906;MIR1122;AC135208.3/104034-103893 39947:Oryza sativa
Japonica Group
Length = 142
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||| ||||||||
Sbjct: 112 ttggttttttatgggacagagggagt 137
>RF00906;MIR1122;AC138001.2/59407-59266 39947:Oryza sativa Japonica
Group
Length = 142
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 ttggttttttatgggacggagggagt 140
||||||||||||||||| ||||||||
Sbjct: 112 ttggttttttatgggacagagggagt 137
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 81 agattcgtagtactaggatntgtcgcatc 109
||||||||||||||||||| |||| ||||
Sbjct: 70 agattcgtagtactaggatgtgtcccatc 42
