miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 228 bits (115), Expect = 2e-59
Identities = 146/155 (94%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||| ||||||||| ||||||||||||||| ||||||||| |||||||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||| |||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtac 4
Score = 188 bits (95), Expect = 2e-47
Identities = 141/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| |||||||||| |||| ||| |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||| | | |||||| | |||||||||||||||| ||||||||||||| ||||
Sbjct: 64 aatgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 228 bits (115), Expect = 2e-59
Identities = 146/155 (94%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||| ||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 180 bits (91), Expect = 4e-45
Identities = 140/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| ||| ||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | ||||||||||||||| |||||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||| |||||||||| ||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 218 bits (110), Expect = 2e-56
Identities = 144/154 (93%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158
Score = 202 bits (102), Expect = 1e-51
Identities = 142/154 (92%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||| |||| | |||||| | |||||||||||||||| ||||||||||||| |||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 216 bits (109), Expect = 7e-56
Identities = 146/157 (92%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 6 ttgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatg 64
|||||||||||||||||||||||||| |||||||||| |||| |||||| ||||||||||
Sbjct: 2 ttgtacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatg 61
Query: 65 ttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaa 124
|||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||
Sbjct: 62 ttaatgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaa 121
Query: 125 atgctagaatgacttacgttgtgaaacggaggaagta 161
|| |||||||||||||| |||||||||||||| ||||
Sbjct: 122 atactagaatgacttacattgtgaaacggagggagta 158
Score = 212 bits (107), Expect = 1e-54
Identities = 144/155 (92%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||||||||||||| |||||| ||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 206 bits (104), Expect = 7e-53
Identities = 144/156 (92%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||||||||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtact 163
||||||||||||| |||||||||||||| ||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagtact 3
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||||| | |||||| | ||||||||||||| || |||||||||||| |||||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 124 actagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 204 bits (103), Expect = 3e-52
Identities = 143/155 (92%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||||||| |||||||||||||||| ||||| ||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
| | |||||||||| ||||||||||||||||||||
Sbjct: 38 caaaaatgacttacattgtgaaacggaggaagtac 4
Score = 174 bits (88), Expect = 3e-43
Identities = 140/156 (89%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
||||||||||||||||||||||||| |||||| | | |||||||||||| ||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgt 62
Query: 66 taatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaa 125
||||||||||||| | |||||| | ||||||||||||| || ||||||||||||| |||
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 122
Query: 126 tgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||| |||||| ||||||| ||||
Sbjct: 123 tgctagaatgacttacattgtgatacggagggagta 158
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 204 bits (103), Expect = 3e-52
Identities = 143/155 (92%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||||||||||||| |||||||||| ||| |||| |||||||| ||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 64 aatgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||| ||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 165 bits (83), Expect = 2e-40
Identities = 138/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| ||||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| |||||||||||||||| |||||||| ||| ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 142/154 (92%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||| ||| ||| |||||||||||| |||||||||| |||| |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 155 bits (78), Expect = 2e-37
Identities = 136/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| || | || |||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||| |||| | ||||| | |||||||||||||||| ||||||||| | | |||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 142/154 (92%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||| |||||||||| |||||||||||||| ||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
Score = 186 bits (94), Expect = 7e-47
Identities = 140/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||| ||| ||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||||||||||||||||||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||| ||||||||| |||||||||||||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 198 bits (100), Expect = 2e-50
Identities = 144/156 (92%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||| | ||| ||||| ||||||||||||||| ||||||||||||| |||||
Sbjct: 65 atgaatctagc-acatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtact 163
|||||||||||||| |||||||||||||| ||||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagggagtact 159
Score = 196 bits (99), Expect = 7e-50
Identities = 143/155 (92%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 158 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 99
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||| | | || ||| ||| ||||||||||||||| ||||||||||||| ||||
Sbjct: 98 aatgaatctaaacatatgtatgtgc-tagattcattaacatcaatatgaatgtgggaaat 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 143/156 (91%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||| ||||||||||||||| || |||||||||| ||||||||||||||||||||| |
Sbjct: 160 tgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatat 101
Query: 66 taatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaa 125
||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 100 taatgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaa 41
Query: 126 tgctagaatgacttacgttgtgaaacggaggaagta 161
| |||||||||||| |||||||||||||||||||
Sbjct: 40 agttagaatgacttatattgtgaaacggaggaagta 5
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || ||||||||| ||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||| |||||||| ||||||||||||| || ||||||||||||| |||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||| |||||||||||||| |||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagtac 159
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 196 bits (99), Expect = 7e-50
Identities = 142/155 (91%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| |||||||||||||||||||||| ||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagtac 4
Score = 188 bits (95), Expect = 2e-47
Identities = 141/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||||||||||||| |||||||||| ||| |||||||||||| |||| |
Sbjct: 4 gtacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgct 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||||||| | ||||||| | |||||||||||||||| ||||||||||||||||||
Sbjct: 64 aatgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||| ||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 196 bits (99), Expect = 7e-50
Identities = 142/155 (91%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||||||||||||||||||| || |||||||||| ||||| ||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatact 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
| ||||||||||||| |||||||||||||| ||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggagta 158
Score = 157 bits (79), Expect = 6e-38
Identities = 137/155 (88%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||||| |||| ||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||||||||| || |||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 141/154 (91%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||| |||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||| |||||||||||||||||| |||||||||||| ||| ||||||||| | |||||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||| ||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
Score = 163 bits (82), Expect = 1e-39
Identities = 137/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || |||||||||| |||| | | ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | ||||| |||||||||| |||| ||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 194 bits (98), Expect = 3e-49
Identities = 142/154 (92%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||| |||||||| || |||||||| |||||||||||||||||||| |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||| ||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
Score = 147 bits (74), Expect = 6e-35
Identities = 136/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | ||||||||||||| || ||||||||||||| |||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa-a 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||| |||||| |||| ||||||||| ||||
Sbjct: 38 ctagaataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 141/154 (91%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||||| |||| |||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| ||||||||||||| |||||||||||||||| | ||||||||||| |||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 178 bits (90), Expect = 2e-44
Identities = 139/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||||||||| || |||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 192 bits (97), Expect = 1e-48
Identities = 143/157 (91%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 6 ttgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatg 64
|||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |
Sbjct: 2 ttgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacg 61
Query: 65 ttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaa 124
||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||||| ||
Sbjct: 62 ttaatgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaa 121
Query: 125 atgctagaatgacttacgttgtgaaacggaggaagta 161
|| ||| ||||||||| |||||||||||||| ||||
Sbjct: 122 attctaaaatgacttagattgtgaaacggagggagta 158
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || |||||| ||| |||||||||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||||||||||| | ||||||||||||| |||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 192 bits (97), Expect = 1e-48
Identities = 143/156 (91%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 158 tgtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgt 99
Query: 66 taatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaa 125
||||||||||||| | |||||||| ||| |||||||||||| ||||||||||| |||||
Sbjct: 98 taatgaatctagaca--tatatatgtctacattcattaacatcaatatgaatgtagaaaa 41
Query: 126 tgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||| ||||| |||||||||||||
Sbjct: 40 tgctagaatgacttacattgtggaacggaggaagta 5
Score = 174 bits (88), Expect = 3e-43
Identities = 140/155 (90%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||| ||||||||| |||||||||| |||| | ||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||| |||| | |||||||| |||||||||||||||| ||||||||||||| |||||
Sbjct: 65 atgaatgtagaca--tatatatgtctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||| ||||| |||||||| |||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagtac 157
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 190 bits (96), Expect = 4e-48
Identities = 142/156 (91%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtact 163
||||||||||||| |||||||||||||| ||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagtact 3
Score = 165 bits (83), Expect = 2e-40
Identities = 138/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||||| | |||||| | |||||||||||||| ||||||||||| ||||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 135/147 (91%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| ||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacgga 154
| ||||||||||| || |||||||||
Sbjct: 125 gtggaatgacttacattatgaaacgga 151
Score = 157 bits (79), Expect = 6e-38
Identities = 131/147 (89%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 16 tccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaatgaatc 74
||||||||| |||||| ||||||| | |||||||||||||||||||||| |||||||||
Sbjct: 151 tccgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatc 92
Query: 75 tagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaat 134
|||| | |||||| | ||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 91 tagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaat 32
Query: 135 gacttacgttgtgaaacggaggaagta 161
||||||| |||||||||||||| ||||
Sbjct: 31 gacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 135/147 (91%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 16 tccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaatgaatc 74
|||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 75 tagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaat 134
|||||||||||||||| ||||||||||||| || || |||||| | ||||||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 135 gacttacgttgtgaaacggaggaagta 161
||||||| |||||||||||||| ||||
Sbjct: 132 gacttacattgtgaaacggagggagta 158
Score = 141 bits (71), Expect = 3e-33
Identities = 129/147 (87%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||| | | |||||| ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||||||||||||| |||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacgga 154
||||||||||||| ||||||||||||
Sbjct: 38 gtagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 186 bits (94), Expect = 7e-47
Identities = 144/159 (90%), Gaps = 5/159 (3%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatat----tga 62
|||||||||||||||||||||||| |||||||||| ||||| || ||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtga 63
Query: 63 tgttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtgga 122
|||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||
Sbjct: 64 tgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggg 123
Query: 123 aaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||||||| |||||||||||||| ||||
Sbjct: 124 aaatgctagaatgacttacattgtgaaacggagggagta 162
Score = 155 bits (78), Expect = 2e-37
Identities = 140/159 (88%), Gaps = 5/159 (3%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||||||||||||||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 68 atgaatctagatagatatatatgcctagattcattaacatta----atatgaatgtggaa 123
||||||||||| | |||||| | |||||||||||||||| | ||||||| || |
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 124 aatgctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 186 bits (94), Expect = 7e-47
Identities = 140/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||||||| |||||||||||| ||| ||||| |||||| ||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||| |||| |||||||||||||| ||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagta 158
Score = 147 bits (74), Expect = 6e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || | |||||||| |||| |||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||||||||||||| ||||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||| ||||||||| |||||||||||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 182 bits (92), Expect = 1e-45
Identities = 141/156 (90%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
||||||||||||||||||||| ||| |||||| ||| |||||||||||| ||||||||||
Sbjct: 160 tgtacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgt 101
Query: 66 taatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaa 125
||||||||||||||||| ||||||| |||||||||| ||||| ||||| ||||||| |||
Sbjct: 100 taatgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaa 41
Query: 126 tgctagaatgacttacgttgtgaaacggaggaagta 161
||| | |||||||||| |||||||||||||| ||||
Sbjct: 40 tgcaaaaatgacttactttgtgaaacggagggagta 5
Score = 149 bits (75), Expect = 1e-35
Identities = 136/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||| ||| |||||| | | |||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||| | | |||||||||||||||| ||||| ||||||| |||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||| |||||||||| ||||||||||||||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaacggaggaagtac 159
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 139/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | ||| ||| ||||| || |||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||| |||||||||| |||||||||||||| ||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
Score = 170 bits (86), Expect = 4e-42
Identities = 138/154 (89%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||| ||| |||| ||||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|| ||| ||| || ||||||||| |||||||||||||||| ||||||||||||| |||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 178 bits (90), Expect = 2e-44
Identities = 138/154 (89%), Gaps = 10/154 (6%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| ||| |||||||||||||||| ||||||||||||| |||||
Sbjct: 89 atgaatctaga---------atgtctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||||||||||||| ||||||||||||| |||||
Sbjct: 65 atgaatctagaca---------ttctagattcattaacatcaatatgaatgtgggaaatg 115
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 116 ctagaatgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 178 bits (90), Expect = 2e-44
Identities = 142/157 (90%), Gaps = 3/157 (1%)
Strand = Plus / Plus
Query: 6 ttgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatg 64
||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 2 ttgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Query: 65 ttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaa 124
||||||||||||||||| ||||| | |||||||||||||| ||||| || |||| ||
Sbjct: 62 ttaatgaatctagatag--gcatatgtccagattcattaacatcaatataaacgtgggaa 119
Query: 125 atgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||| |||||||||||||||||||
Sbjct: 120 atgctagaatgacttatattgtgaaacggaggaagta 156
Score = 159 bits (80), Expect = 1e-38
Identities = 138/155 (89%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || |||||||||| ||||||||| || ||||||||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||| || | || ||| |||||||||||||||| ||||||||||||| |||||
Sbjct: 96 atgaatctggacatatgcctat--ctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||| |||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 178 bits (90), Expect = 2e-44
Identities = 140/154 (90%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||| |||||| |||||||||||||||||||||| ||| ||| |||||
Sbjct: 65 atgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||| ||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
Score = 147 bits (74), Expect = 6e-35
Identities = 136/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||||| |||||||| ||| ||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||| |||| | | |||||||||||| ||| |||||||||||| |||||
Sbjct: 97 atgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| ||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgcgaaacggaggaagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 141/157 (89%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 6 ttgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatg 64
||||||| |||||||| |||||| || |||||||||| |||| |||||||||||||||
Sbjct: 161 ttgtactccctccgttccacaatataagtcattctagcatttttcacattcatattgata 102
Query: 65 ttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaa 124
|||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||| ||
Sbjct: 101 ttaatgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaa 42
Query: 125 atgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||||| |||||||||||||| ||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 157 bits (79), Expect = 6e-38
Identities = 137/155 (88%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||||||||||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||||||||| || |||||||||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||| ||||| |||||||| |||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagtac 159
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 176 bits (89), Expect = 6e-44
Identities = 104/109 (95%)
Strand = Plus / Plus
Query: 31 agtcattctagtatttcccacattcatattgatgttaatgaatctagatagatatatatg 90
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatatg 61
Query: 91 cctagattcattaacattaatatgaatgtggaaaatgctagaatgactt 139
|||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 62 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 145 bits (73), Expect = 2e-34
Identities = 100/109 (91%)
Strand = Plus / Minus
Query: 31 agtcattctagtatttcccacattcatattgatgttaatgaatctagatagatatatatg 90
||||||||||| |||||||||||||||||||||||||||||||||||| | |||||| |
Sbjct: 109 agtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatcta 50
Query: 91 cctagattcattaacattaatatgaatgtggaaaatgctagaatgactt 139
|||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 49 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 176 bits (89), Expect = 6e-44
Identities = 104/109 (95%)
Strand = Plus / Minus
Query: 31 agtcattctagtatttcccacattcatattgatgttaatgaatctagatagatatatatg 90
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 109 agtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatg 50
Query: 91 cctagattcattaacattaatatgaatgtggaaaatgctagaatgactt 139
|||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 49 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 145 bits (73), Expect = 2e-34
Identities = 100/109 (91%)
Strand = Plus / Plus
Query: 31 agtcattctagtatttcccacattcatattgatgttaatgaatctagatagatatatatg 90
||||||||||| |||||||||||||||||||||||||||||||||||| | |||||| |
Sbjct: 2 agtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatcta 61
Query: 91 cctagattcattaacattaatatgaatgtggaaaatgctagaatgactt 139
||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 62 tttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 172 bits (87), Expect = 1e-42
Identities = 139/154 (90%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|| |||||| ||||||||||||| |||||||||||||||| ||||||||| ||| |||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|| ||||||||||| |||||||||||||| ||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggagta 5
Score = 149 bits (75), Expect = 1e-35
Identities = 136/154 (88%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||| || |||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||| |||||||| ||||| |||||| |||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 122
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 172 bits (87), Expect = 1e-42
Identities = 141/158 (89%), Gaps = 7/158 (4%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||| | |||||||||| ||||| |||||| |||| |||||||||||||||||||
Sbjct: 92 atgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtacttt 165
|||||||||||||| |||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtacttt 1
Score = 135 bits (68), Expect = 2e-31
Identities = 134/155 (86%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt- 62
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||| | || ||| | ||| | |||||||||| |||||||||||||||||
Sbjct: 63 -----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaag 117
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||| ||||
Sbjct: 118 gctagaatgacttacattgtgaaacggagggagta 152
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 172 bits (87), Expect = 1e-42
Identities = 139/154 (90%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|| |||||| ||||||||||||| |||||||||||||||| ||||||||| ||| |||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|| ||||||||||| |||||||||||||| ||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagta 156
Score = 149 bits (75), Expect = 1e-35
Identities = 136/154 (88%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||| || |||||||| ||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||| |||||||| ||||| |||||| |||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 172 bits (87), Expect = 1e-42
Identities = 141/158 (89%), Gaps = 7/158 (4%)
Strand = Plus / Plus
Query: 5 attgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 1 attgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Query: 64 gttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaa 123
| |||||||||||| ||||||| |||||||||||| ||| ||||||||||| | |
Sbjct: 61 gctaatgaatctag------atatatgtctagattcattagcatcaatatgaatgtagga 114
Query: 124 aatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||||| |||||||||||||| ||||
Sbjct: 115 aatgctagaatgacttatattgtgaaacggagggagta 152
Score = 159 bits (80), Expect = 1e-38
Identities = 137/155 (88%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || |||||||||| |||||| ||||||||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||| |||||||||||| ||| ||||||||||||| |||||
Sbjct: 92 atgaatctagacatatat------ctagattcattagcatcaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 138/154 (89%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||||||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| |||||||||| |||||||||||| ||| |||||| ||||| |||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||| |||||||||| |||||||||||||| ||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagta 158
Score = 163 bits (82), Expect = 1e-39
Identities = 137/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||| ||| ||||| ||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | ||||||||||||| || | ||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 167 bits (84), Expect = 6e-41
Identities = 139/155 (89%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || |||||||| | |||||||||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||| |||| | |||||||| |||||||||||||||| | |||||||||| ||||||
Sbjct: 65 atgaatttagacatatatatat--ctagattcattaacatgagtatgaatgtgaaaaatg 122
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||| |||||||||||||| |||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagtac 157
Score = 163 bits (82), Expect = 1e-39
Identities = 140/157 (89%), Gaps = 3/157 (1%)
Strand = Plus / Minus
Query: 6 ttgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatg 64
||||||| |||||||||||||||||| |||||||||| |||| |||||||||| | |||
Sbjct: 159 ttgtactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatg 100
Query: 65 ttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaa 124
|||||||||||||||| |||||||| ||| |||||||||||| | ||||||||||| ||
Sbjct: 99 ttaatgaatctagata--tatatatgtctaaattcattaacatgagtatgaatgtgggaa 42
Query: 125 atgctagaatgacttacgttgtgaaacggaggaagta 161
|||| ||||||||||| |||||||||||||||||||
Sbjct: 41 atgccagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 167 bits (84), Expect = 6e-41
Identities = 137/155 (88%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| || ||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 149 gtactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 90
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||| ||||||| |||||||||||||||||||||| ||||||| ||||
Sbjct: 89 aatgaat----------atatatgtctagattcattaacattaatataaatgtgggaaat 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 145 bits (73), Expect = 2e-34
Identities = 135/156 (86%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||| |||||||||||| ||||||||||||| |||||
Sbjct: 65 atgaatctagacatatat----------attcattaacatcaatatgaatgtgggaaatg 114
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtact 163
|||||||||||||| ||||||||||| || ||||||
Sbjct: 115 ctagaatgacttacattgtgaaacggggggagtact 150
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 119/131 (90%)
Strand = Plus / Plus
Query: 31 agtcattctagtatttcccacattcatattgatgttaatgaatctagatagatatatatg 90
|||||||||| ||||||||||||||||| | |||||||||||||||||| ||||| |||
Sbjct: 28 agtcattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatg 87
Query: 91 cctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaa 150
||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 88 tctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtgaaa 147
Query: 151 cggaggaagta 161
|||||| ||||
Sbjct: 148 cggagggagta 158
Score = 133 bits (67), Expect = 9e-31
Identities = 128/147 (87%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||| |||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | ||||||| ||||||||||||||| |||||||||||| |||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacgga 154
||||||||||||| || || ||||||
Sbjct: 38 ttagaatgacttacattatggaacgga 12
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 163 bits (82), Expect = 1e-39
Identities = 137/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||||||||||| | | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaata 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||| ||||| |||||||||||||| ||||
Sbjct: 125 ctagaatgtcttacattgtgaaacggagggagta 158
Score = 147 bits (74), Expect = 6e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | |||||||||||||||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||||||||||||| ||||| | ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatttctagtgaaaata 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 163 bits (82), Expect = 1e-39
Identities = 137/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| ||||||||| |||| ||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 131/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||||||| |||| |||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||||||||| ||| |||||| ||||| | |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| || ||||||||||| ||||
Sbjct: 125 gtagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 1e-39
Identities = 137/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| ||||||||||||||| ||||| ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||| ||||||||| ||||||||||| ||| ||||||||||||||||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 123 bits (62), Expect = 8e-28
Identities = 132/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||||||| |||| |||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| | |||||||||||| ||| ||||| ||||| |||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 159 bits (80), Expect = 1e-38
Identities = 137/155 (88%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||| | |||||||||| ||||| |||||| |||| ||||||||| |||||||||
Sbjct: 65 atgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaatg 118
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||| ||||||||||||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggaggaagtac 153
Score = 127 bits (64), Expect = 5e-29
Identities = 133/155 (85%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||||||||||||| |||||||||| |||| ||| ||||||||||||||
Sbjct: 153 gtacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt- 95
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||| | || ||| | ||| | |||||||||| |||||||||||||||||
Sbjct: 94 -----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaat 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 157 bits (79), Expect = 6e-38
Identities = 136/154 (88%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| |||| | ||||||||||| |||| ||||||||||||| |||||
Sbjct: 92 atgaatctagacagatgt------ctagattcattgacatcaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggaggaagta 5
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||| | || || ||||||||||| |||| ||||||||||||| |||||
Sbjct: 65 atgaatctag------acatctgtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||| ||||
Sbjct: 119 ctagaatgacttacattatgaaacggagggagta 152
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 137/155 (88%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| ||| ||||| ||| |||||||||||||||| ||||||||||| |||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|| |||||||||| ||||||||||||| |||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggagtac 4
Score = 141 bits (71), Expect = 3e-33
Identities = 135/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| ||||||||||||| |||| |||||| || ||||| ||||||||||| ||||||
Sbjct: 4 gtactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||||| | ||||||| ||||||||| ||||| |||||||||||| ||||
Sbjct: 64 aatgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||| ||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 151 bits (76), Expect = 4e-36
Identities = 137/155 (88%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||| ||| ||||||||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||| ||| | ||||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 65 atgaatcaagaca--tatatatgcatagattcattaacatctatatgaatgtgaaaaatg 122
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||| |||||||| | || ||||||||||| |||||
Sbjct: 123 ctaaaatgacttgcattatgaaacggagggagtac 157
Score = 127 bits (64), Expect = 5e-29
Identities = 134/155 (86%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| ||||||||||| |||| | |||||| ||| |||| ||||||||||| ||||||
Sbjct: 157 gtactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtt 98
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||| | ||||||||| || ||||||||||||| | |||||||||| ||||
Sbjct: 97 aatgaatcta--tgcatatatatgtcttgattcattaacatctacatgaatgtgggaaat 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
|||| |||||||||| |||||||||||||||||||
Sbjct: 39 gctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 151 bits (76), Expect = 4e-36
Identities = 136/154 (88%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||||||||| | |||||| |||| ||| ||||||||||||| |||||
Sbjct: 65 atgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
| ||||||||||| || ||||||||||| ||||
Sbjct: 122 gtggaatgacttacattatgaaacggagggagta 155
Score = 111 bits (56), Expect = 3e-24
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| ||||||| | |||||||||||||||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||| ||||||| ||||| | |||||||||||| || ||||||||||||| ||||
Sbjct: 95 atggatctagac---tatatctatctagattcattagtatcaatatgaatgtgggaaata 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 145 bits (73), Expect = 2e-34
Identities = 133/154 (86%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||| ||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||| ||||| | ||||||||||||||| |||||||||||||||||||
Sbjct: 86 atgaaactagaca------------tagattcattaacatcaatatgaatgtggaaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 131/154 (85%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||| |||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||| |||| |||| ||||||||||| ||||||||||||| |||||
Sbjct: 65 atgaatc------------tatgtctagtttcattaacatcaatatgaatgtgggaaatg 112
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| ||||||||| |||| ||||
Sbjct: 113 ctagaatgacttacattgtgaaaccgagggagta 146
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 131/149 (87%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||||||| |||||| | |||||||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||| ||||||||||||| ||||||||| |||| | |||||||||||| |||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggagg 156
|||||||||||||| || |||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
Score = 113 bits (57), Expect = 8e-25
Identities = 127/149 (85%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 14 cctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaatgaa 72
||||||||||| |||||| |||||||||| ||||||||||||||||| || |||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 73 tctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatgctaga 132
|||||| | |||||| | |||||||| |||| | |||||||| | | ||||||||||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 133 atgacttacgttgtgaaacggaggaagta 161
||||||||| || ||||||||||| ||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 145 bits (73), Expect = 2e-34
Identities = 133/154 (86%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||| ||||| || |||||| ||||||||| |||||||||||||||||||
Sbjct: 86 atgtatctatat------------ctagatacattaacatcaatatgaatgtggaaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 137 bits (69), Expect = 5e-32
Identities = 132/154 (85%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||| ||||||||| ||||| ||||||||| ||||||||||||| |||||
Sbjct: 65 atgtatctagata------------tagatacattaacatcaatatgaatgtgggaaatg 112
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| ||||| |||||||||||||
Sbjct: 113 ctagaatgacttacattgtggaacggaggaagta 146
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 134/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||| ||| ||||||| ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||| |||||| | || | || |||||||||||||||| |||||||| ||| ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||||||| ||| |||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | | || ||| ||| |||||||||||| ||||| |||||| ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 134/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||| |||| | || ||||||||||||||| ||| ||||||||||||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||| |||||||||||||||| ||||||||||| ||| ||||||||| || |||||
Sbjct: 65 atgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||| ||||| |||||||| ||||
Sbjct: 125 ttagaatgacttatattgtggaacggagggagta 158
Score = 107 bits (54), Expect = 5e-23
Identities = 130/154 (84%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||| |||||| || ||||||||| ||||| || ||||||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| | | |||||| | ||| |||||||| ||| ||||||||| ||||||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||| |||||||||||||
Sbjct: 38 ctagaatgacttatactgtggaacggaggaagta 5
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 126/144 (87%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 14 cctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaatgaa 72
|||||||||||||||||| |||||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 73 tctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatgctaga 132
|||||| | |||| |||| ||||||||| | | |||||||||||| | ||||||||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 133 atgacttacgttgtgaaacggagg 156
||||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
Score = 139 bits (70), Expect = 1e-32
Identities = 126/144 (87%), Gaps = 1/144 (0%)
Strand = Plus / Plus
Query: 14 cctccgtttcacaatgt-agtcattctagtatttcccacattcatattgatgttaatgaa 72
||||||||||||||||| ||||||||||| || || |||||||||||||| | ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69
Query: 73 tctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatgctaga 132
|||||| | | ||||||| ||||||||||| |||| |||||||||||| ||||||||||
Sbjct: 70 tctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129
Query: 133 atgacttacgttgtgaaacggagg 156
||||||||| ||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 134/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||| | | | ||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||| || | |||| |||||||||||||||| |||||||| | | ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 123 bits (62), Expect = 8e-28
Identities = 132/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||||||| ||| || | |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | | | |||| |||||||||||||||| ||||||||||| | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 134/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| ||| |||||||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||| || |||||||||||||||| |||||||| || ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| | ||||| || ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| | | |||||| ||| | || |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | ||||||||| |||||||||||||||| |||||||||||| |||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| ||||||| || ||||||||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 136/157 (86%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||| ||| ||||||| |||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||| |||||| | || | || |||||||||||||||| |||||||||| | ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtactt 164
|||||||||||||| || ||||||||||| |||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtactt 2
Score = 125 bits (63), Expect = 2e-28
Identities = 133/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| ||||||||||| |||||| |||||||||| ||| || |||||||||| ||||||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||||| | | || ||| ||| |||||||||||| |||| |||||| |||
Sbjct: 64 aatgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| || ||||||||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||||| |||| | | |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| | ||||||||| || |||||||| ||| ||||||||||||||||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 123 bits (62), Expect = 8e-28
Identities = 132/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||| |||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||| || | | |||||| | ||||||||||| ||| |||||||| | |||||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||| ||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||||||| ||| || | |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||| | | |||| |||||||||||||||| ||||||||||| | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||| | | | ||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||| || | ||| |||||||||||||||| |||||||| | | ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | | |||||||||| ||||| | ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| ||| ||| ||||| |||||||||||||||| | |||||| ||| ||||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| | ||||| |||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 128/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| | | |||||| ||| |||| |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | || ||| | ||||||||||||||| ||||| | |||| |||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| | ||||| |||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 129 bits (65), Expect = 1e-29
Identities = 131/154 (85%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||||| |||||||||||| || ||||| ||| |||||||||
Sbjct: 65 atgaatctagat------------gtagattcattaatatcaatataaatatggaaaatg 112
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 113 ctagaatgacttacattgtgaaacggagggagta 146
Score = 113 bits (57), Expect = 8e-25
Identities = 129/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||| ||| ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| || |||||||||||||||| |||||||||||| |||||
Sbjct: 86 atgaatctacat------------ctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 129 bits (65), Expect = 1e-29
Identities = 135/155 (87%), Gaps = 10/155 (6%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||| ||||||||||||| ||| |||||| |||||||||||| ||||||
Sbjct: 4 gtacttcctctgtttcacaatgtaagtc-ttctagcatttcccacatt------gatgtt 56
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||||||||||||||||| | |||||||||||||||| ||||||||| ||| ||||
Sbjct: 57 aatgaatctagatagatatatgt--ctagattcattaacatcaatatgaatatgggaaat 114
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
|||| ||||||||| |||||||||||||| ||||
Sbjct: 115 gctaaaatgacttatattgtgaaacggagggagta 149
Score = 117 bits (59), Expect = 5e-26
Identities = 135/157 (85%), Gaps = 10/157 (6%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || |||||| ||| |||||||| ||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||| ||| |||||||||||||| || ||||||| |||||
Sbjct: 89 atgaatctagacatatatctat--ctagattcattaac------atcaatgtgggaaatg 38
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtactt 164
|||||| ||||||| ||||||||| ||||||||||||
Sbjct: 37 ctagaa-gacttacattgtgaaacagaggaagtactt 2
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 134/156 (85%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||| || |||| || ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||| | | ||||| ||||||||||| ||| |||||||||||| ||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtact 163
||| |||||||||| || ||||||||||| ||||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagtact 160
Score = 109 bits (55), Expect = 1e-23
Identities = 131/155 (84%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| ||||||||||| |||||| |||||| ||| ||| ||||||||||||| |||| |
Sbjct: 159 gtactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggt 100
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||| | | || | ||| |||||||||||||||| ||||| || ||| ||
Sbjct: 99 aatgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaag 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| || ||||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 127 bits (64), Expect = 5e-29
Identities = 132/154 (85%), Gaps = 8/154 (5%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || ||||||||| ||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||| ||| || || || || ||||||||||| ||||| ||||||| ||||
Sbjct: 65 atgaaactacatctattta-------agtttcattaacatcaatataaatgtgggaaata 117
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||||||||
Sbjct: 118 ctagaatgacttacattgtgaaacggaggaagta 151
Score = 125 bits (63), Expect = 2e-28
Identities = 133/154 (86%), Gaps = 8/154 (5%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||| || || ||| || ||| ||||||||||| ||||||||||||| ||||
Sbjct: 91 atgaaact---taaatagat----gtagtttcattaacatcaatatgaatgtgggaaata 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||| |||||||||||||| ||||
Sbjct: 38 atagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 127 bits (64), Expect = 5e-29
Identities = 132/156 (84%), Gaps = 14/156 (8%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||||||||||||| |||||||| |||||||||| ||||||||||||||||
Sbjct: 146 gtacttcctccgttttacaatgtaagtcattctagcatttcccacattcata-------- 95
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||||||||||||||| |||||||||||||||| ||||||||| || ||||
Sbjct: 94 -----atctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaat 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||||| || ||||||||||| |||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagtac 4
Score = 107 bits (54), Expect = 5e-23
Identities = 131/158 (82%), Gaps = 14/158 (8%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||| ||||||||||| |||||| |||||||||| ||||| || ||||||||||||||
Sbjct: 3 tgtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgt 62
Query: 66 taatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaa 125
||||||||||||| | |||||| | |||||| ||||||||||| |||
Sbjct: 63 taatgaatctagacatatatatctatctagat-------------tatgaatgtgggaaa 109
Query: 126 tgctagaatgacttacgttgtgaaacggaggaagtact 163
|||||||||||||||| |||| ||||||||||||||||
Sbjct: 110 tgctagaatgacttacattgtaaaacggaggaagtact 147
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 133/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| ||||||||||| ||| || | | |||||||||| |||| |||||||| ||||||
Sbjct: 4 gtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||| ||||||| ||| ||||| |||||||||||||||| ||||||||||||| |||
Sbjct: 64 aatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||| || | ||||| |||||||||||||| ||||
Sbjct: 124 cctaaaaagtcttacattgtgaaacggagggagta 158
Score = 87.7 bits (44), Expect = 5e-17
Identities = 129/156 (82%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | | || ||| ||| |||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | || ||||| |||| ||||||||||| |||||||| ||| |||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtact 163
|||||| | |||| || ||||||||||| ||||||
Sbjct: 38 ctagaaagtcttatattatgaaacggagggagtact 3
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 133/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| ||||||||||| ||| || | | |||||||||| |||| |||||||| ||||||
Sbjct: 159 gtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtt 100
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||| ||||||| ||| ||||| |||||||||||||||| ||||||||||||| |||
Sbjct: 99 aatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaat 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||| || | ||||| |||||||||||||| ||||
Sbjct: 39 cctaaaaagtcttacattgtgaaacggagggagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 129/156 (82%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | | || ||| ||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | || ||||| |||| ||||||||||| |||||||| ||| |||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtact 163
|||||| | |||| || ||||||||||| ||||||
Sbjct: 125 ctagaaagtcttatattatgaaacggagggagtact 160
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 123 bits (62), Expect = 8e-28
Identities = 131/154 (85%), Gaps = 10/154 (6%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||| ||| | | ||||||||||||||| |||||||||||||||||||
Sbjct: 89 atgaaactatgtca---------catagattcattaacatcaatatgaatgtggaaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 113 bits (57), Expect = 8e-25
Identities = 131/154 (85%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||| |||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| | || | ||| ||||||||||| |||||||||||| |||||
Sbjct: 65 atgaatctatgt-ga--------catagtttcattaacatcaatatgaatgtgagaaatg 115
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| ||||||||| |||| ||||
Sbjct: 116 ctagaatgacttacattgtgaaaccgagggagta 149
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 123 bits (62), Expect = 8e-28
Identities = 74/78 (94%)
Strand = Plus / Minus
Query: 85 tatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgtt 144
|||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| ||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 145 gtgaaacggaggaagtac 162
||||||||||||||||||
Sbjct: 21 gtgaaacggaggaagtac 4
Score = 119 bits (60), Expect = 1e-26
Identities = 70/72 (97%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 67 aatgaatctaga 78
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 135/158 (85%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 5 attgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||||||| |||||||||||||||||| | | |||||||| | |||| |||||||| |||
Sbjct: 1 attgtactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagat 60
Query: 64 gttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaa 123
|||||||||| |||| | ||||||| |||||||||||||||| ||||||||||||
Sbjct: 61 gttaatgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggc 120
Query: 124 aatgctagaatgacttacgttgtgaaacggaggaagta 161
||| |||||| | ||||| |||||||||||||| ||||
Sbjct: 121 aatactagaaagtcttacattgtgaaacggagggagta 158
Score = 109 bits (55), Expect = 1e-23
Identities = 131/155 (84%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | | |||||||||| ||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||| || ||| |||||||||||| |||||||| ||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||| | ||||| |||||||||||||| |||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 123 bits (62), Expect = 8e-28
Identities = 92/102 (90%)
Strand = Plus / Minus
Query: 34 cattctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcct 93
||||||| ||||||||||||||||| | |||||||||||||||||| ||||| ||| ||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 94 agattcattaacattaatatgaatgtggaaaatgctagaatg 135
||||||||||||| ||||||||||||||||||||||||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatgctagaatg 1
Score = 91.7 bits (46), Expect = 3e-18
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 34 cattctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcct 93
|||||||| |||| |||||||||||| | |||||||||||||||| | ||||||| ||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 94 agattcattaacattaatatgaatgtggaaaatgctagaatg 135
||||||||||||| |||||||||||| ||||| |||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaatg 102
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 135/158 (85%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 5 attgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||||||| ||||||||||| |||||| | | || ||| ||| | ||||||||||| |||
Sbjct: 1 attgtactccctccgtttcataatgtaagactttttagcattcctcacattcatatagat 60
Query: 64 gttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaa 123
||||||||||||||| | | |||||| |||||||||||||||| ||||||||||||
Sbjct: 61 gttaatgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggc 120
Query: 124 aatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||| | ||||| || ||||||||||||||||
Sbjct: 121 aatgctagaaagtcttacattatgaaacggaggaagta 158
Score = 117 bits (59), Expect = 5e-26
Identities = 132/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| | | |||||| ||| ||||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||| | || |||||||||||||||| ||||||||||| ||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||| || | ||||| || ||||||||||| |||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagtac 4
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 135/158 (85%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 5 attgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||||||| ||||||||||| |||||| | | || ||| ||| | ||||||||||| |||
Sbjct: 162 attgtactccctccgtttcataatgtaagactttttagcattgctcacattcatatagat 103
Query: 64 gttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaa 123
||||||||||||||| | | |||||| |||||||||||||||| ||||||||||||
Sbjct: 102 gttaatgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggc 43
Query: 124 aatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||| | ||||| || ||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 132/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| | | |||||| ||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||| | || |||||||||||||||| ||||||||||| ||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||| || | ||||| || ||||||||||| |||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggagtac 159
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 121 bits (61), Expect = 3e-27
Identities = 129/153 (84%), Gaps = 14/153 (9%)
Strand = Plus / Plus
Query: 10 acttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaa 68
||||||||||||||| |||||| |||||||||| ||||| |||||| |||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaa 65
Query: 69 tgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatgc 128
| ||||||| |||||||||||||||| ||||||||| ||||||||||
Sbjct: 66 taaatctagt-------------ctagattcattaacatcaatatgaatatggaaaatgc 112
Query: 129 tagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||| ||||
Sbjct: 113 tagaatgacttacattgtgaaacggagggagta 145
Score = 113 bits (57), Expect = 8e-25
Identities = 128/153 (83%), Gaps = 14/153 (9%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||| ||| ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| ||||||| |||||||| ||||| |||||| |||||
Sbjct: 85 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagt 160
|||||||||||||| || |||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagt 6
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 121 bits (61), Expect = 3e-27
Identities = 130/154 (84%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||||| |||||||||||| || ||||| ||| |||||||||
Sbjct: 65 atgaatctagat------------gtagattcattaatatcaatataaatatggaaaatg 112
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||| |||||||||| |||||||||||||| ||||
Sbjct: 113 ctataatgacttacattgtgaaacggagggagta 146
Score = 105 bits (53), Expect = 2e-22
Identities = 128/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||| ||| |||| ||| ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| || |||||||||||||||| |||||||||||| |||||
Sbjct: 86 atgaatctacat------------ctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagta 5
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 121 bits (61), Expect = 3e-27
Identities = 132/157 (84%), Gaps = 19/157 (12%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||| ||||||||||||||| || |||||||||| |||||||||||||||||||||||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgt 83
Query: 66 taatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaa 125
||||||||||| || || |||||||||||||||||||||| |||
Sbjct: 82 taatgaatcta----------------tacat--attaacattaatatgaatgtgggaaa 41
Query: 126 tgctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||||| ||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 107 bits (54), Expect = 5e-23
Identities = 129/157 (82%), Gaps = 19/157 (12%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgt 62
Query: 66 taatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaa 125
|||| ||| ||||||||||||||| ||||||||||||| |||
Sbjct: 63 taat------------------atgtatagattcattaacatcaatatgaatgtgggaaa 104
Query: 126 tgctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||||| |||||||||||||| |||||
Sbjct: 105 tgctagaatgacttatattgtgaaacggagggagtac 141
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||
Sbjct: 65 ctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaac 124
Query: 152 ggaggaagtactt 164
|||||||||||||
Sbjct: 125 ggaggaagtactt 137
Score = 95.6 bits (48), Expect = 2e-19
Identities = 76/84 (90%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||||||||||||| ||| |||||| |||| ||| ||||||||| |||||
Sbjct: 135 gtacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtt 76
Query: 67 aatgaatctagatagatatatatg 90
||||||||||||| |||||||||
Sbjct: 75 aatgaatctagatgaatatatatg 52
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||||| ||||||||||||| || ||||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatat 59
|||| ||||||||||| |||||| ||||||||| |||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 119 bits (60), Expect = 1e-26
Identities = 133/155 (85%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| ||||||||||| |||||| | | |||||| ||| || | |||||||||||||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||||||| || ||| || ||||||||||||||||| ||||||||||||| |||
Sbjct: 64 aatgaatctaggta--tatgcgtgtctagattcattaacatttatatgaatgtggacaat 121
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||| | ||||| || ||||||||||||||||
Sbjct: 122 gctagaaagtcttacattatgaaacggaggaagta 156
Score = 97.6 bits (49), Expect = 5e-20
Identities = 131/156 (83%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| | | |||||| ||| |||||||||||| ||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | ||||| ||||||||||||||||| ||||||||| | | ||||
Sbjct: 96 atgaatctagacacgcatata--cctagattcattaacatcaatatgaatataggcaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtact 163
|||||| | ||||| || ||||||||||| ||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagggagtact 3
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 119 bits (60), Expect = 1e-26
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 83 tatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacg 142
|||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 143 ttgtgaaacggaggaagtac 162
|||||||||||||| |||||
Sbjct: 23 ttgtgaaacggaggtagtac 4
Score = 113 bits (57), Expect = 8e-25
Identities = 70/73 (95%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 3 tgtactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 66 taatgaatctaga 78
|||||||||||||
Sbjct: 63 taatgaatctaga 75
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 119 bits (60), Expect = 1e-26
Identities = 132/155 (85%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||||||||||||| |||||| ||| ||||| |||||| | ||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgct 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||| |||||| || | |||||||||||| ||| ||||| ||||||||||||
Sbjct: 64 aatgaatttagatatatct------ctagattcattagcatcaatataaatgtggaaaat 117
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
|||| ||||||||| |||||||||||||| ||||
Sbjct: 118 gctaaaatgacttatattgtgaaacggagggagta 152
Score = 109 bits (55), Expect = 1e-23
Identities = 132/155 (85%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || |||||| ||| |||| ||||||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| ||||||| ||| |||||||| ||| ||| | |||||| |||||
Sbjct: 92 atgaatctaga--gatatat----ctaaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||| |||||||||| ||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 117 bits (59), Expect = 5e-26
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 83 tatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacg 142
|||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 143 ttgtgaaacggaggaagta 161
|||||||||||||||||||
Sbjct: 117 ttgtgaaacggaggaagta 135
Score = 101 bits (51), Expect = 3e-21
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||||||||||||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 75 atgaatctaga 65
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 108 taatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 58 taatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatatt 60
|||| ||||| |||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 131/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | | |||||| ||| |||| |||||| | |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | || ||| || |||||||||||||||| ||||| |||||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| | ||||| |||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 130/154 (84%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| | | |||||| ||| ||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| | | ||| ||||| |||||||||||| ||| | |||||| ||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| | ||||| |||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 115 bits (58), Expect = 2e-25
Identities = 88/97 (90%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 65 ttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaa 124
|||||| |||||||||||||||| | |||||| ||||||||| ||||||||||||| ||
Sbjct: 35 ttaatggatctagatagatatatgt--ctagatccattaacatcaatatgaatgtgggaa 92
Query: 125 atgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||||| || ||||||||||||||||
Sbjct: 93 atgctagaatgacttacattatgaaacggaggaagta 129
Score = 101 bits (51), Expect = 3e-21
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 68 atgaatctaga 78
||| |||||||
Sbjct: 69 atggatctaga 59
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 115 bits (58), Expect = 2e-25
Identities = 130/157 (82%), Gaps = 19/157 (12%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgt 62
Query: 66 taatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaa 125
|||| ||| ||||||||||||||| |||||||||||||||||
Sbjct: 63 taat------------------atgtatagattcattaacatcaatatgaatgtggaaaa 104
Query: 126 tgctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||||| |||||||||||||| |||||
Sbjct: 105 tgctagaatgacttatattgtgaaacggagggagtac 141
Score = 113 bits (57), Expect = 8e-25
Identities = 131/157 (83%), Gaps = 19/157 (12%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||| ||||||||||||||| || |||||||||| |||| ||||||||||||||||||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgt 83
Query: 66 taatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaa 125
||||||||||| || || |||||||||||||||||||||| |||
Sbjct: 82 taatgaatcta----------------tacat--attaacattaatatgaatgtgggaaa 41
Query: 126 tgctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||||| ||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 115 bits (58), Expect = 2e-25
Identities = 130/155 (83%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||| || |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||||| |||||||||||||||| ||||||||| | | |||||
Sbjct: 65 atgaatctagat------------ctagattcattaacatcaatatgaatatagtaaatg 112
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||| ||||| ||||||||||||||
Sbjct: 113 ctagaatgacttatattgtggaacggaggaagtac 147
Score = 107 bits (54), Expect = 5e-23
Identities = 129/155 (83%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||| |||||| || |||||||||| |||| | | |||||||||||||||
Sbjct: 147 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 88
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||||||||| |||||||||||||||| ||||||||||||| ||||
Sbjct: 87 aatgaatctagat------------ctagattcattaacatcaatatgaatgtgggaaat 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
| || |||||||||| || ||||||||||| ||||
Sbjct: 39 ggtaaaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 115 bits (58), Expect = 2e-25
Identities = 130/155 (83%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||| || |||||||||||||||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||||| |||||||||||||||| ||||||||| | | |||||
Sbjct: 86 atgaatctagat------------ctagattcattaacatcaatatgaatatagtaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||| ||||| ||||||||||||||
Sbjct: 38 ctagaatgacttatattgtggaacggaggaagtac 4
Score = 107 bits (54), Expect = 5e-23
Identities = 129/155 (83%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||| |||||| || |||||||||| |||| | | |||||||||||||||
Sbjct: 4 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||||||||| |||||||||||||||| ||||||||||||| ||||
Sbjct: 64 aatgaatctagat------------ctagattcattaacatcaatatgaatgtgggaaat 111
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
| || |||||||||| || ||||||||||| ||||
Sbjct: 112 ggtaaaatgacttacattatgaaacggagggagta 146
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 100/114 (87%)
Strand = Plus / Minus
Query: 48 ccacattcatattgatgttaatgaatctagatagatatatatgcctagattcattaacat 107
|||||||||||| |||||||||||||||| | | | ||||||| ||||||||||||||||
Sbjct: 118 ccacattcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacat 59
Query: 108 taatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||| || |||||||||| | ||||| || ||||||||||||||||
Sbjct: 58 ctatatgaatgtagacaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| | | |||||| ||| | |||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||| | || ||||||||||||||| ||||||||||||| ||
Sbjct: 65 atgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaac 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| | ||||| || ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 131/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | | |||||| ||| ||| ||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| ||| ||||| || |||||||||||| ||| || ||||||||| ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| | ||||| || ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| | | |||||| ||| |||||||||| || |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | ||||| | ||||||||||||||| ||||||||| || ||||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| | ||||| |||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 115 bits (58), Expect = 2e-25
Identities = 80/86 (93%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 6 ttgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatg 64
||||||||||||||||||||||| || |||||||||||||||| || ||| |||||||||
Sbjct: 2 ttgtacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatg 61
Query: 65 ttaatgaatctagatagatatatatg 90
|||||||||||||||||||||||||
Sbjct: 62 ataatgaatctagatagatatatatg 87
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||| ||| ||||| ||| || |||| ||||||||||||| |||||||||
Sbjct: 74 ctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaac 15
Query: 152 ggaggaagtac 162
|||||||||||
Sbjct: 14 ggaggaagtac 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 123 aaatgctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||| |||||||||| || ||||||||||| |||||
Sbjct: 90 aaatgctacaatgacttacattatgaaacggagggagtac 129
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 15
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 115 aatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||| ||||| ||||||||||| | || ||||||||||||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacggaggaagta 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaat-gtagtcattctagtatttcccacatt 54
|||||||||||||||| ||| | |||||||||| ||||||||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatt 88
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 115 bits (58), Expect = 2e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctag 95
|||||| ||| ||||||||||||| ||||||||||||||||||| |||||| |||||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaa 133
|||||||||||| |||||||||||| ||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 99.6 bits (50), Expect = 1e-20
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctag 95
|||||| ||| ||||||||||||| ||||||||||||||||| | |||||||| ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaa 133
|||||||||||| |||||||||||| ||||||||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 115 bits (58), Expect = 2e-25
Identities = 74/78 (94%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 68 atgaatctagatagatat 85
||||||||||||||||||
Sbjct: 76 atgaatctagatagatat 59
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 67 ctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaac 126
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 127 ggagggagta 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 133/157 (84%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| | | |||||| ||| ||||||||||| | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | | ||||| ||||||||||||||| ||||| || |||| ||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtactt 164
|||||| | ||||| |||||||||||||| |||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtactt 161
Score = 109 bits (55), Expect = 1e-23
Identities = 131/155 (84%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| | | |||||| ||| ||| || ||||| ||||||
Sbjct: 159 gtactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtt 100
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||| ||| ||| | ||| ||||||||||||||| | |||||||||| |||
Sbjct: 99 aatgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaat 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||| | ||||| |||||||||||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 113 bits (57), Expect = 8e-25
Identities = 130/156 (83%), Gaps = 15/156 (9%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|| |||||||| | |||||| ||||| ||||||||||||| |||||
Sbjct: 84 ataaatctaga--------------caaattcatgaacatcaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtact 163
|||||||| ||||| |||||||||||||| ||||||
Sbjct: 38 ctagaatggcttacattgtgaaacggagggagtact 3
Score = 111 bits (56), Expect = 3e-24
Identities = 129/155 (83%), Gaps = 15/155 (9%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| | |||||||| ||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||| | | ||||||| || ||||| ||||||||||||| ||||
Sbjct: 64 catgaattt--------------gtctagatttatgaacatcaatatgaatgtgggaaat 109
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||||||||
Sbjct: 110 gctagaatgacttacattgtgaaacggaggaagta 144
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 113 bits (57), Expect = 8e-25
Identities = 129/156 (82%), Gaps = 19/156 (12%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||||| |||||||||| ||||||||| ||| |||||
Sbjct: 80 atgaatctagat------------------tcattaacatcaatatgaatatgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtact 163
|||||||||||||| |||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtact 3
Score = 111 bits (56), Expect = 3e-24
Identities = 128/155 (82%), Gaps = 19/155 (12%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| |||||||||| |||||||| |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||| |||||||||||||||| ||||||||| ||| ||||
Sbjct: 64 aatgaat------------------ctagattcattaacatcaatatgaatatgggaaat 105
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| || ||||||||||||||||
Sbjct: 106 gctagaatgacttacattatgaaacggaggaagta 140
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 111 bits (56), Expect = 3e-24
Identities = 129/156 (82%), Gaps = 18/156 (11%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgtagt-cattctagtatttcccacattcatattgatgt 65
|||||| |||||||||||||||||| | |||||||| ||||| |||||||||||||||||
Sbjct: 143 tgtactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgt 84
Query: 66 taatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaa 125
||||||||| | ||||||||||||| ||||||||||||| |||
Sbjct: 83 taatgaatcaat-----------------gattcattaacatcaatatgaatgtgggaaa 41
Query: 126 tgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||| |||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 65/67 (97%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 atgaatc 74
|||||||
Sbjct: 65 atgaatc 71
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 111 bits (56), Expect = 3e-24
Identities = 129/155 (83%), Gaps = 15/155 (9%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||| |||||| |||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 145 gtactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtt 86
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||| |||||||||| |||| |||||||| | |||||||||| |||||
Sbjct: 85 aataaatctagatatatat--------------attaacatcactatgaatgtgaaaaat 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| || ||||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/155 (81%), Gaps = 15/155 (9%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||| |||| |||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|| |||||||| ||||||| |||||||| | ||||||||||| ||||
Sbjct: 65 at------------atatatat--ctagatttattaacatcactatgaatgtgggaaata 110
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||| || |||||| |||| |||||
Sbjct: 111 ctagaatgacttacattatgaaacagagggagtac 145
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 109 bits (55), Expect = 1e-23
Identities = 68/71 (95%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
||||||||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 74 ctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Query: 152 ggaggaagta 161
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 103 aacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||| ||||||||||||| ||||||||||||||||||| || ||||||||||| ||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 109 bits (55), Expect = 1e-23
Identities = 68/71 (95%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| |||||||||||| |||| |||||||||||||| || ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaac 15
Query: 152 ggaggaagta 161
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||| ||||||||||||||||||| || ||||| ||||| ||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatatt 60
|||| ||||| ||||| |||||| |||||||||| ||||| ||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 109 bits (55), Expect = 1e-23
Identities = 131/157 (83%), Gaps = 17/157 (10%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| |
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtca 83
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||| ||||| ||||||||||||| || |||||||||||| |||||
Sbjct: 82 atg----------gatat------ctagattcattaatatcaatatgaatgtgagaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtactt 164
|||||||||||||| |||||||||||||| |||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtactt 2
Score = 107 bits (54), Expect = 5e-23
Identities = 128/155 (82%), Gaps = 17/155 (10%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| |||||||||| ||||| ||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||||||||| || |||| |||| ||||||||| ||| ||||
Sbjct: 64 aatgaatctagat----------------atccattgacatcaatatgaatatgggaaat 107
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||||||||
Sbjct: 108 gctagaatgacttacattgtgaaacggaggaagta 142
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 109 bits (55), Expect = 1e-23
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||||||||||||||||||| || |||||||||| ||||| ||||||||||||||||||
Sbjct: 128 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtt 69
Query: 67 aatgaatctagatag 81
|||||||||||||||
Sbjct: 68 aatgaatctagatag 54
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||
Sbjct: 58 ctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaac 117
Query: 152 ggaggaagtact 163
||||||||||||
Sbjct: 118 ggaggaagtact 129
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 123 aaatgctagaatgacttacgttgtgaaacggaggaagtactt 164
||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtactt 2
Score = 58.0 bits (29), Expect = 4e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgt-agtcattctagtatttc 47
||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 133/158 (84%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 5 attgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||||||| |||||||||||| ||||| | | |||||||| | |||| |||||||| |||
Sbjct: 1 attgtactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagat 60
Query: 64 gttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaa 123
|||||||||| |||| | ||||||| |||||||||||||||| |||||||| |||
Sbjct: 61 gttaatgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggc 120
Query: 124 aatgctagaatgacttacgttgtgaaacggaggaagta 161
||| |||||| | ||||| |||||||||||||| ||||
Sbjct: 121 aatactagaaagtcttacattgtgaaacggagggagta 158
Score = 93.7 bits (47), Expect = 7e-19
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | | |||||||||| |||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||| || ||| |||||||||||| |||||||| ||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
|||||| | ||||| | |||||||||||| |||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagtac 4
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggag 155
|||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 156 gaagta 161
||||||
Sbjct: 10 gaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 68 atgaat 73
||||||
Sbjct: 65 atgaat 70
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 104 acattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggag 155
|||| ||||||||| ||||||||||||||||||||||| || ||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||||||| |||||| |||||||||| |||| ||| ||||||||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 84 atatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgt 143
||||||| |||||||||||| | |||||||||||||| ||||||||||||||||||| |
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 144 tgtgaaacggaggaagta 161
||||||||||||||||||
Sbjct: 113 tgtgaaacggaggaagta 130
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||||||||||||||| | ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||| |||||||||||| |||||| ||||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagtac 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatat 59
|||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 130/154 (84%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | | || || ||| |||||||||| || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||| |||| | || |||||||||||||||| ||||||||||| ||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||| | | ||||| |||||||||||||| ||||
Sbjct: 38 ctaggaagtcttacattgtgaaacggagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | | | |||| ||| | ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | | |||||| |||||||||||||||| || ||||||||| ||||
Sbjct: 65 atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|| || | ||||| |||||||||||||| ||||
Sbjct: 125 ttaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 107 bits (54), Expect = 5e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaac 15
Query: 152 ggaggaagtacttt 165
||||| ||||||||
Sbjct: 14 ggagggagtacttt 1
Score = 91.7 bits (46), Expect = 3e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| |||||||||| |||| | | |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtt 63
Query: 67 aatgaatctagata 80
||||||||||||||
Sbjct: 64 aatgaatctagata 77
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 100 attaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaag 159
|||||||| ||||||||||| | |||| |||||||||||| |||||||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 160 ta 161
||
Sbjct: 137 ta 138
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 128/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||||||||||| || ||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||||| ||| |||||||| ||| ||||||||||| |||||||
Sbjct: 65 atgaatctagat------------ctaaattcattagcatcaatatgaatgtagaaaatg 112
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||||||| |||| |||||||||||||| ||||
Sbjct: 113 ctagaatgatttacattgtgaaacggagggagta 146
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/154 (81%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgtag-tcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||||| |||| | ||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||| ||||| |||||||||||| ||| ||||| ||| || |||||
Sbjct: 86 atgaatttagat------------ctagattcattagcatcaatataaatatgaaaaata 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 105 bits (53), Expect = 2e-22
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 68 atgaatctagata 80
|||||||||||||
Sbjct: 55 atgaatctagata 43
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
||||||||||||| || ||||||||||||| ||||||||||||||||||| || ||||||
Sbjct: 46 ctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaac 105
Query: 152 ggaggaagta 161
||||||||||
Sbjct: 106 ggaggaagta 115
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 125 atgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||||| |||||||||||||| ||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agtcattctag 41
|||| ||||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 105 bits (53), Expect = 2e-22
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 68 atgaatctagata 80
||||||| |||||
Sbjct: 74 atgaatcaagata 62
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 95 gattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacgga 154
||||||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 155 ggaagta 161
|||||||
Sbjct: 128 ggaagta 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 104 acattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtact 163
|||| |||||||||||||||||||| | |||||||||| |||||||||||| | ||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagtact 3
Score = 54.0 bits (27), Expect = 6e-07
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 16 tccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||||||||||||| |||||| | | |||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 85 tatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgtt 144
|||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| ||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 145 gtgaaacggaggaagta 161
||||||||||||||||
Sbjct: 123 atgaaacggaggaagta 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| ||| || ||||||||| |||| ||||||||||||||||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 79 atgaatctaga 69
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 102 taacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||| || || |||||| |||||||||||||||||||| || ||||||||||| ||||
Sbjct: 64 taacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| |||||||||| |||||||| |||||||||||||||
Sbjct: 140 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 81
Query: 67 aatgaatctaga 78
||||||||||||
Sbjct: 80 aatgaatctaga 69
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||
Sbjct: 70 ctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaac 129
Query: 152 ggaggaagtact 163
||||| ||||||
Sbjct: 130 ggagggagtact 141
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 94 agattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacgg 153
|||||||||| ||| ||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 154 aggaagta 161
||||||||
Sbjct: 12 aggaagta 5
Score = 103 bits (52), Expect = 8e-22
Identities = 65/68 (95%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 68 atgaatct 75
||||||||
Sbjct: 65 atgaatct 72
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaac 15
Query: 152 ggaggaagtact 163
||||| ||||||
Sbjct: 14 ggagggagtact 3
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| |||||||||| |||||||| |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 67 aatgaatctaga 78
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtt 89
Query: 67 aatgaatctaga 78
||||||||||||
Sbjct: 88 aatgaatctaga 77
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| |||||||||||| |||| ||| |||||||||| |||||||||
Sbjct: 78 ctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaac 137
Query: 152 ggaggaagtac 162
||||| |||||
Sbjct: 138 ggagggagtac 148
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 131/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| | | || ||||||| || ||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| | | || |||||| ||||||| |||||||| | ||| |||||| ||||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtact 163
|||||| | ||||| |||||||||||||| ||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtact 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 128/155 (82%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| | | |||||| ||| ||||||| ||| | ||||||
Sbjct: 159 gtactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtt 100
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||| |||||||| | ||| ||||| ||||||||||||||| | ||||||| | |||
Sbjct: 99 aataaatctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaat 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||| || | ||||| |||||||||||||||||||
Sbjct: 39 actataaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 103 bits (52), Expect = 8e-22
Identities = 128/151 (84%), Gaps = 3/151 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || |||||||||| ||| ||||||||| ||| ||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||| | ||||||| | |||||||||||||| |||||||||||| ||||
Sbjct: 96 atgaatctag--ccacatatatgtccagattcattaacatctatatgaatgtgggcaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaa 158
||||||||||||| || |||||||||||||
Sbjct: 38 ctagaatgacttatattatgaaacggaggaa 8
Score = 103 bits (52), Expect = 8e-22
Identities = 128/151 (84%), Gaps = 3/151 (1%)
Strand = Plus / Plus
Query: 12 ttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaatg 70
||||||||||||| ||| || |||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 71 aatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatgcta 130
||||| | | |||||| || |||||||||||| || ||| |||||||| ||| |||
Sbjct: 68 aatctgg--acatatatgtggctagattcattagtatctataagaatgtgggcaatccta 125
Query: 131 gaatgacttacgttgtgaaacggaggaagta 161
|||||||||| |||||||||||||| ||||
Sbjct: 126 gaatgacttatattgtgaaacggagggagta 156
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 63 ctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaac 122
Query: 152 ggaggaagtac 162
||||| |||||
Sbjct: 123 ggagggagtac 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| ||||||||||||||| || |||||||||| |||||||||||||||||| ||| |
Sbjct: 133 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 74
Query: 67 aatgaatctagata 80
||||||||||||||
Sbjct: 73 aatgaatctagata 60
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 54/56 (96%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 101 bits (51), Expect = 3e-21
Identities = 128/155 (82%), Gaps = 14/155 (9%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| ||||| || ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|| ||||||||||||| ||| || ||| ||||||||||||| |||||
Sbjct: 85 ataaatctagatagatctat-------------ctatcatcaatatgaatgtgggaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||| |||||||||| ||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/155 (83%), Gaps = 14/155 (9%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatg-- 61
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||||| ||| ||||||| |||||||| ||||| ||| || ||||
Sbjct: 62 -------atagatagatctat----ctagatttattaacatcaatataaatatgagaaat 110
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||||||||||||| ||||
Sbjct: 111 gctagaatgacttacattgtgaaacggagggagta 145
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 119/142 (83%), Gaps = 16/142 (11%)
Strand = Plus / Minus
Query: 15 ctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaatgaat 73
||||||||||||||||| |||||||||| |||| ||||||||||||||||||||
Sbjct: 137 ctccgtttcacaatgtaagtcattctagcattt-------tcatattgatgttaatgaat 85
Query: 74 ctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaa 133
||||||| || ||||||||||||||| ||||||||||||| ||||| |||||
Sbjct: 84 ctagata--------tgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 33
Query: 134 tgacttacgttgtgaaacggag 155
|||||||| |||||||||||||
Sbjct: 32 tgacttacattgtgaaacggag 11
Score = 101 bits (51), Expect = 3e-21
Identities = 119/142 (83%), Gaps = 16/142 (11%)
Strand = Plus / Plus
Query: 15 ctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaatgaat 73
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 74 ctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaa 133
||| | | || |||||||||||||||| ||||| |||||||||||||
Sbjct: 71 ctaaacatat--------ctagattcattaacatcaatat-------gaaaatgctagaa 115
Query: 134 tgacttacgttgtgaaacggag 155
|||||||| |||||||||||||
Sbjct: 116 tgacttacattgtgaaacggag 137
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 74 ctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaac 15
Query: 152 ggaggaagtac 162
||||| |||||
Sbjct: 14 ggagggagtac 4
Score = 91.7 bits (46), Expect = 3e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| ||||||||||||||| || |||||||||| |||||||||||||||||| ||| |
Sbjct: 4 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 63
Query: 67 aatgaatctagata 80
||||||||||||||
Sbjct: 64 aatgaatctagata 77
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 80 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 87.7 bits (44), Expect = 5e-17
Identities = 54/56 (96%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 98 tcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggagga 157
|||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 158 agtactt 164
|||||||
Sbjct: 8 agtactt 2
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| |||||| ||| |||| |||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtt 63
Query: 67 aatga 71
|||||
Sbjct: 64 aatga 68
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 102 taacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||| |||||||||||||||||||||| ||| | |||| |||||||||||||| ||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Query: 162 c 162
|
Sbjct: 129 c 129
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgtagtc-attctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| | ||| ||| |||| |||||||||||||||||||
Sbjct: 129 gtactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtt 70
Query: 67 a 67
|
Sbjct: 69 a 69
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggag 155
|||||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggag 11
Query: 156 gaagta 161
||||||
Sbjct: 10 gaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 68 atgaatctagatag 81
|||||| |||||||
Sbjct: 65 atgaatgtagatag 78
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtactt 164
||||||||| || ||||| ||| |||||||||| || ||||||||||| |||||||
Sbjct: 84 aatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagtactt 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatg 64
||||| ||||||||||| |||||| |||||| |||||||| || |||||||||||||
Sbjct: 137 gtactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||| ||| ||||||||||||| |||||||| |||||||||| |||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 152 ggaggaagta 161
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 68 atgaatctag 77
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggag 155
|||||||||||| ||||||||||| | ||||||||||||||||||| |||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 156 gaagta 161
||||||
Sbjct: 109 gaagta 114
Score = 99.6 bits (50), Expect = 1e-20
Identities = 63/66 (95%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 68 atgaat 73
||||||
Sbjct: 54 atgaat 49
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 112 atgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||| ||||||||||||||||||| |||||||||||||| |||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcat 57
||||| |||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||||||| ||||| || ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||| || |||||||| ||||||||| |||||| | |||||||| ||||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||| |||||||||| || |||||| |||| ||||
Sbjct: 125 ctacaatgacttacattatgaaacagagggagta 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 127/154 (82%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||| |||||| |||||| |||||| ||| |||| |||||||| | |||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||| | ||||| || | |||||||| |||||| |||| ||| || |||||
Sbjct: 98 gtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| || ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||| ||| ||||||||||||| |||||||| |||||||||| |||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 152 ggaggaagta 161
||||||||||
Sbjct: 134 ggaggaagta 143
Score = 99.6 bits (50), Expect = 1e-20
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 68 atgaatctag 77
||||||||||
Sbjct: 83 atgaatctag 74
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 99.6 bits (50), Expect = 1e-20
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctag 95
|||||| ||| ||||||||||||| ||||||||||||||||| | | ||| ||| ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaa 133
|||||||||||| ||||||||||||| ||||||||||
Sbjct: 46 attcattaacatatatatgaatgtggacaatgctagaa 9
Score = 83.8 bits (42), Expect = 7e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 48 ccacattcatattgatgttaatgaatctagatagatatatatgcctagattcattaacat 107
|||||||||||| ||||||||||||||||| | ||| | |||||||||||||||||||
Sbjct: 21 ccacattcatatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacat 80
Query: 108 taatatgaatgtggaaaatgctagaa 133
|||||||||||| ||||||||||
Sbjct: 81 ctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 99.6 bits (50), Expect = 1e-20
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctag 95
|||||| ||| ||||||||||||| ||||||||||||||||| | |||| |||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctag 47
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaa 133
|||||||||||| |||||||| ||| ||||||||||
Sbjct: 46 attcattaacatatatatgaatatgggcaatgctagaa 9
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctag 95
|||||| ||| |||| |||||||| |||||||||||||||| | | ||||||||||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaa 133
|||||||||||| |||||||||||| ||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 97.6 bits (49), Expect = 5e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 68 atgaatctagata 80
|||||||||||||
Sbjct: 63 atgaatctagata 51
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| ||||||||||| | ||||||||||||||||||| || ||||||
Sbjct: 54 ctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaac 113
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 114 ggagggagta 123
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 119 tggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 47 tggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtattt 46
|||||||||||||||||||||| ||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 97.6 bits (49), Expect = 5e-20
Identities = 97/112 (86%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 52 attcatattgatgttaatgaatctagatagatatatatgcctagattcattaacattaat 111
|||||| | |||||||||||||||||| | ||| | || |||||||||||||||| ||
Sbjct: 112 attcatctagatgttaatgaatctagaca--tatgtgtgtctagattcattaacatctat 55
Query: 112 atgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtact 163
|||||||||| |||||||||| ||||||| || ||||||||||||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagtact 3
Score = 91.7 bits (46), Expect = 3e-18
Identities = 89/101 (88%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||||||||||||||| |||||| ||| |||||| ||| ||||||||||||| ||||||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacat 107
||||||||||| | | | ||||| ||||||||||||||||
Sbjct: 64 aatgaatctag--acacacatatgtctagattcattaacat 102
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 153 gaggaagta 161
|||| ||||
Sbjct: 13 gagggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 68 atgaatcta 76
|||||||||
Sbjct: 65 atgaatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||| ||||||||||||||||||| |||||||||||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 71.9 bits (36), Expect = 3e-12
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatat 59
|||| |||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 31 agtcattctagtatttcccacattcatattgatgttaatgaatctagatagatatat 87
||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 122 agtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 91.7 bits (46), Expect = 3e-18
Identities = 101/122 (82%), Gaps = 13/122 (10%)
Strand = Plus / Plus
Query: 31 agtcattctagtatttcccacattcatattgatgttaatgaatctaga------------ 78
||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 2 agtcattctagcatttcccacattcatattgatgttaatgtatctagatggttaatgtat 61
Query: 79 -tagatatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgac 137
||||||||| | |||||| ||||||||| ||||||||||||| |||||||||||||||
Sbjct: 62 ctagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgac 121
Query: 138 tt 139
||
Sbjct: 122 tt 123
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
||||||||||||||| ||||||||||||| | |||||||||||||||| ||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 153 gaggaagta 161
|||||||||
Sbjct: 124 gaggaagta 132
Score = 97.6 bits (49), Expect = 5e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || |||||||||| || ||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 68 atgaatcta 76
|||||||||
Sbjct: 72 atgaatcta 64
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 103 aacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||| |||||||||||||||||| |||||||||| |||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggag 155
||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 156 gaagtactt 164
|||||||||
Sbjct: 10 gaagtactt 2
Score = 93.7 bits (47), Expect = 7e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtt 63
Query: 67 aatgaat 73
|||||||
Sbjct: 64 aatgaat 70
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||| ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatat 59
|||| ||||||||||||||||| ||||||||||| |||| ||| ||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 153 gaggaagta 161
|||| ||||
Sbjct: 122 gagggagta 130
Score = 97.6 bits (49), Expect = 5e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||| ||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 68 atgaatcta 76
|||||||||
Sbjct: 70 atgaatcta 62
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 100 attaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaag 159
|||||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 160 ta 161
||
Sbjct: 2 ta 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||| |||||||||| || |||||| ||| |||| ||||||||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 68 at 69
||
Sbjct: 61 at 62
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 97.6 bits (49), Expect = 5e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 68 atgaatctagata 80
|||||||||||||
Sbjct: 75 atgaatctagata 63
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 102 taacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| ||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 66 ctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaac 125
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 126 ggagggagta 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || |||||||||| |||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 97 ttcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggagg 156
||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 157 aagta 161
|||||
Sbjct: 9 aagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 62/65 (95%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 atgaa 72
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
||||||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 153 gaggaagta 161
|||||||||
Sbjct: 122 gaggaagta 130
Score = 97.6 bits (49), Expect = 5e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || |||||| |||||||| ||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 68 atgaatcta 76
|||||||||
Sbjct: 70 atgaatcta 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 104 acattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||| |||||||||||||||||| | | |||||||||| |||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||| |||||||||||||||||| |||||| | |||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 85 tatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgtt 144
|||||| ||||||||||| |||| |||||||||||| ||||||||||||||||||| ||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 145 gtgaaacggagg 156
||||||||||||
Sbjct: 122 gtgaaacggagg 133
Score = 83.8 bits (42), Expect = 7e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 14 cctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaatgaa 72
|||||||||||||||||| |||||||||| ||||| |||||||||||| |||| ||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaa 74
Query: 73 tctaga 78
||||||
Sbjct: 73 tctaga 68
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 104 acattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggagg 156
|||| |||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 82 atatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttac 141
||||||||| |||||||||||||||| | ||||||||||| |||||||||| | |||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 142 gttgtgaaacggaggaagta 161
|||||||||||||||||||
Sbjct: 24 attgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| | | |||||| ||| |||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 68 atgaatctagatagatatat 87
||||||||||| | ||||||
Sbjct: 65 atgaatctagacatatatat 84
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 98 tcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggagga 157
|||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 158 agta 161
||||
Sbjct: 127 agta 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 61/64 (95%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 68 atga 71
||||
Sbjct: 70 atga 67
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgt 62
Query: 66 taa 68
|||
Sbjct: 63 taa 65
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 101 ttaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagt 160
||||||| |||||||||||| ||||||||||||||||||| |||||||||||||| |||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 161 ac 162
||
Sbjct: 5 ac 4
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 93.7 bits (47), Expect = 7e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 85 tatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgtt 144
|||||| |||||||||||||||| |||||||||||| |||||||||| ||||||| ||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 145 gtgaaacggaggaagtact 163
||||||||||||||||||
Sbjct: 21 atgaaacggaggaagtact 3
Score = 87.7 bits (44), Expect = 5e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||||||||||||||| |||||| ||| |||||| ||| ||||||||||||| ||||||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtt 63
Query: 67 aatgaatctaga 78
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 93.7 bits (47), Expect = 7e-19
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||| ||| |||| ||| | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 68 atgaatctagatagatata 86
|||||||||||||||||||
Sbjct: 70 atgaatctagatagatata 52
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| |||||| | ||| ||||||||| |||||||||| |||||||||
Sbjct: 61 ctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaac 120
Query: 152 ggaggaagta 161
||||||||||
Sbjct: 121 ggaggaagta 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatat 59
|||||| ||||||||| |||||||| |||||| |||||||||||||||| ||||
Sbjct: 3 tgtactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 95 gattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacgga 154
||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 155 ggaagta 161
|| ||||
Sbjct: 11 gggagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 68 atgaatc 74
|||||||
Sbjct: 65 atgaatc 71
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 76 atgaatctaga 66
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||| ||| ||||||||| ||| |||| |||||||||||||| || ||||||
Sbjct: 67 ctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaac 126
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 127 ggagggagta 136
Score = 73.8 bits (37), Expect = 7e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatattgatg 64
|||||||||||||||||||||| ||| ||||||||||||| || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||| || |||| ||||||| |||||| |||||||||||||||||||
Sbjct: 57 aatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 93.7 bits (47), Expect = 7e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggag 155
|||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtg-aaaatgctagaatgacttacattgtgaaacggag 11
Query: 156 gaagtac 162
|||||||
Sbjct: 10 gaagtac 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 64/69 (92%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 6 ttgtacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatattgatg 64
||||||||||||||||||||||||| ||||||||||| |||| ||||| ||||||||||
Sbjct: 2 ttgtacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatg 60
Query: 65 ttaatgaat 73
|||||||||
Sbjct: 61 ttaatgaat 69
Score = 65.9 bits (33), Expect = 2e-10
Identities = 43/45 (95%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 112 atgaatgtggaaaatgctagaatgacttacgttgtgaaacggagg 156
||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 64 atgaatgtg-aaaatgctagaatgacttacattgtgaaacggagg 107
Score = 44.1 bits (22), Expect = 6e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 14 cctccgtttcacaatgt-agtcattctagtattt 46
||||||||||||||||| ||||||||||| ||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcattt 74
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| | | |||||| ||| | || || ||||| || |||
Sbjct: 4 gtactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||| | | ||| ||||| |||||||||||||||| | |||||| ||| |||
Sbjct: 64 aatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
|||| || | ||||| |||||||||||||||||||
Sbjct: 124 gctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 130/157 (82%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| | | || ||| ||| |||| |||||| | |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | || ||| || ||||||||||||| | ||||| || || ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtactt 164
|||||| | ||||| |||||||||||||| |||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagtactt 2
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||||||||||||||| |||||| | | || ||| ||| ||||||||||||| |||| |
Sbjct: 4 gtacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgct 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||| |||||| ||| ||| ||| |||||||||||| ||| |||||||||||| |||
Sbjct: 64 aataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaat 123
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
| ||||| | ||||| |||||||||||||| ||||
Sbjct: 124 gttagaaagtcttacattgtgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 127/155 (81%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | | ||||| ||| ||||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | ||||| |||||| |||| ||| |||||||||||| ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||| || | ||||| || |||||||||||||||||
Sbjct: 38 ctataaagtcttacattatgaaacggaggaagtac 4
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 93.7 bits (47), Expect = 7e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 82 atatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttac 141
||||||||| |||||||||||| ||| ||||||||| ||||||||||| |||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 142 gttgtgaaacggaggaagt 160
||||||||||||||||||
Sbjct: 113 attgtgaaacggaggaagt 131
Score = 69.9 bits (35), Expect = 1e-11
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 10 acttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaa 68
||||||||||||||||||| || |||||| ||| |||| || ||||||||||||| |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72
Query: 69 tgaatctagatagatatat 87
|||||||||| | ||||||
Sbjct: 71 tgaatctagacatatatat 53
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||| || ||||||||||||||||||| ||||||||| ||| |||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaacagagaaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatat 59
||||| ||| ||||||||||||| |||||||||| ||||||| |||||||||
Sbjct: 5 tactttctctgtttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 93.7 bits (47), Expect = 7e-19
Identities = 84/94 (89%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 38 ctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctagat 97
|||| ||||||||| ||||||||||| |||||||||||||||||||||| || ||||||
Sbjct: 1 ctagcatttcccacgttcatattgatattaatgaatctagatagatata-at--ctagat 57
Query: 98 tcattaacattaatatgaatgtggaaaatgctag 131
||||||| || |||||||| |||| |||||||||
Sbjct: 58 tcattaatatcaatatgaacgtgggaaatgctag 91
Score = 79.8 bits (40), Expect = 1e-14
Identities = 81/94 (86%), Gaps = 3/94 (3%)
Strand = Plus / Minus
Query: 38 ctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctagat 97
|||| ||||||||| ||||||||||| ||||||||||||||| ||||| | ||||||
Sbjct: 91 ctagcatttcccacgttcatattgatattaatgaatctagat---tatatctatctagat 35
Query: 98 tcattaacattaatatgaatgtggaaaatgctag 131
||||||| || |||||||| |||| |||||||||
Sbjct: 34 tcattaatatcaatatgaacgtgggaaatgctag 1
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 103 aacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 89.7 bits (45), Expect = 1e-17
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
||||||||| ||||| |||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 72 tagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 153 gaggaagta 161
|||| ||||
Sbjct: 13 gagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||||||||||||||||||||| |||||||||| |||| ||| |||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Score = 73.8 bits (37), Expect = 7e-13
Identities = 63/69 (91%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| || ||||||| |||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt- 63
Query: 68 atgaatcta 76
|||||||||
Sbjct: 64 atgaatcta 72
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 99 cattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaa 158
||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 159 gta 161
|||
Sbjct: 7 gta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| ||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 68 atg 70
|||
Sbjct: 65 atg 67
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 124 aatgctagaatgacttacgttgtgaaacgga 154
|||||||||||||||||| ||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacgga 94
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||| ||| |||||||||||| ||||||||||||| |||||| |||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaac 15
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/154 (81%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| || ||||||| |||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||||| ||| |||||||| ||| ||||| ||||| |||||||
Sbjct: 65 atgaatctagat------------ctaaattcattagcatcaatataaatgtagaaaatg 112
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||| ||||| |||| |||||||||||||| ||||
Sbjct: 113 ctaaaatgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 128/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||| |||||| |||||| | | |||||| || |||||||| |||| ||| ||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||| | ||||||||||||||| ||| |||||||||||| ||||
Sbjct: 65 atgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| | ||||| || ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| | | |||||| ||| ||||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||||||| | | ||||||| |||||||||||| || |||| ||||||| || |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| | ||||| || |||||| |||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacagaggaagta 5
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggag 155
||||||||| || ||||||||||| | ||||||||||||||||||| |||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 156 gaagta 161
||||||
Sbjct: 121 gaagta 126
Score = 91.7 bits (46), Expect = 3e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||||| |||||||||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 68 atgaat 73
||||||
Sbjct: 66 atgaat 61
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
||||||| |||| ||||||||||||||||||| |||||||||||||| |||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatat 59
||||| |||||||||||||||||| |||||||||| ||||||||| |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
||||||||||||||| ||||| | |||||||||||||||||| |||||| ||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 153 gaggaagtac 162
|||| |||||
Sbjct: 13 gagggagtac 4
Score = 87.7 bits (44), Expect = 5e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||||||||||||||||| || ||||||| |||| ||||| | |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtt 63
Query: 67 aatgaatctagatagatata 86
|||||||||| |||||||||
Sbjct: 64 aatgaatctatatagatata 83
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 106/126 (84%)
Strand = Plus / Plus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctag 95
|||||| ||| |||||| |||||| |||||||||||| ||| | | ||||||||| ||||
Sbjct: 33 ttctagcattgcccacaatcatatagatgttaatgaacctatacacatatatatgtctag 92
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggag 155
|||||||| ||| |||||||||||| |||||||||| | |||| | ||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 152
Query: 156 gaagta 161
||||||
Sbjct: 153 gaagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctag 95
|||||| ||| ||||||||||||| |||| ||||||||||||| | |||||| || |||
Sbjct: 130 ttctagcattgcccacattcatatagatgctaatgaatctagacatatatatgtgtatag 71
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaa 133
||||||||||| |||||| ||||| ||||||||||
Sbjct: 70 gttcattaacatctatatgattgtgggcaatgctagaa 33
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| ||||||||||||||||||| |||| |||||||| | |||||||
Sbjct: 61 ctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaac 120
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 121 ggagggagta 130
Score = 83.8 bits (42), Expect = 7e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||| ||||| |||| |||| |||| ||||||||||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 68 atgaatctagatagatat 85
||||||||||||| ||||
Sbjct: 70 atgaatctagatatatat 53
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||| ||| | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 68 atgaatctagatagatat 85
||||||||||||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| ||||| | ||| |||||||||||||||||||| |||||||||
Sbjct: 61 ctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaac 120
Query: 152 ggaggaagta 161
||||||||||
Sbjct: 121 ggaggaagta 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatat 59
|||||| ||||||||| |||||||| |||||||||||||||| |||||||||||
Sbjct: 3 tgtactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||| |||| |||||||||||||| |||| ||||||||| |||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagtac 4
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 100 attaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaag 159
|||||||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 59/62 (95%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 68 at 69
||
Sbjct: 65 at 66
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggag 155
|||||||||||| ||||| || ||| |||||||||||||||||||| |||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 156 gaagta 161
||||||
Sbjct: 126 gaagta 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||||||| |||| ||| || ||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 68 atgaat 73
||||||
Sbjct: 71 atgaat 66
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 121 gaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||| |||||||||| |||||||||||||| |||||
Sbjct: 45 gaaaatgctaaaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 47 cccacattcatattgatgttaatgaatctagatagatatatatgcctagattcattaaca 106
||||||||||||| |||||||||||||||||| | ||||||||| ||||||||||| |||
Sbjct: 20 cccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttaca 79
Query: 107 ttaatatgaatgtg 120
| |||||||||||
Sbjct: 80 tctatatgaatgtg 93
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 49 cacattcatattgatgttaatgaatctagatagatatatatgcctagattcattaacatt 108
||||||||||| ||||| |||||||||||| | |||||| || ||||||||||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 109 aatatgaatgtgg 121
||||||||||||
Sbjct: 33 tatatgaatgtgg 21
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| | ||||||| |||| |||||||||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 68 atgaatctagatagatat 85
||||||||||||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| |||||||||||| |||||| ||||||| ||||| || ||||||
Sbjct: 61 ctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaac 120
Query: 152 ggaggaagta 161
||||||||||
Sbjct: 121 ggaggaagta 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||| |||||||||||||||||| |||||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatat 59
|||| ||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
|||||| |||||||| ||||| | ||||||||||||||||||||||||| ||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 153 gaggaagta 161
|||| ||||
Sbjct: 131 gagggagta 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||| ||||| | ||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 68 atgaatctagatagata 84
|| |||||| |||||||
Sbjct: 79 ataaatctatatagata 63
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 88/101 (87%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||||||||||||||| |||| | | | |||||| ||| ||||||||||| | ||||||
Sbjct: 4 gtacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtt 63
Query: 67 aatgaatctagatagatatatatgcctagattcattaacat 107
|||||||||| | | ||||||||| ||||||||||||||||
Sbjct: 64 aatgaatctaaacacatatatatgtctagattcattaacat 104
Score = 87.7 bits (44), Expect = 5e-17
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 61 gatgttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtg 120
|||||||||||||||||| | |||||| || ||||||||||||||| | |||||||||
Sbjct: 105 gatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtg 46
Query: 121 gaaaatgctagaatgacttacgttgtgaaacggaggaagtactt 164
| |||||||||| | ||| | || |||||||||||||||||||
Sbjct: 45 ggtaatgctagaaagtcttgcattatgaaacggaggaagtactt 2
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 98 tcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggagga 157
|||||||||| |||||||||||||||| ||||| |||||||||| || ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 158 agta 161
||||
Sbjct: 8 agta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||| |||||| |||||| ||| | || ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 68 atga 71
||||
Sbjct: 65 atga 68
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| || |||||||||||||||| ||||||||| |||| ||||
Sbjct: 71 aatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||| |||| ||||||||||||| |||||||||| | |||||||||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 87.7 bits (44), Expect = 5e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 82 atatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttac 141
||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 142 gttgtgaaacggaggaagta 161
|| ||||| ||||||||||
Sbjct: 113 attatgaaatggaggaagta 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||| ||||| |||||| |||||||||| ||| | ||||||||||| |||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 68 atgaatctagatagatatat 87
||||||||||| | ||||||
Sbjct: 72 atgaatctagacatatatat 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 124 aatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||||| || ||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 94 agattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacgg 153
|||||||||| ||| |||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 154 aggaagta 161
||||||||
Sbjct: 128 aggaagta 135
Score = 87.7 bits (44), Expect = 5e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || |||||||||| ||||| |||||||||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 68 atgaatct 75
||||||||
Sbjct: 75 atgaatct 68
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 98 tcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggagga 157
|||||| ||| |||||||||||| ||||||||||||||||||| | ||||||| ||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 158 agta 161
||||
Sbjct: 8 agta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||| ||||||| ||||| |||||||||| ||||| |||||||||||||||| ||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 68 atga 71
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 94 agattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacgg 153
||||||||||| || ||| ||||||||| |||||||||||||||||| |||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 154 aggaagta 161
||||||||
Sbjct: 128 aggaagta 135
Score = 87.7 bits (44), Expect = 5e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || |||||||||| |||||||||||||| |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 68 atgaatct 75
||||||||
Sbjct: 75 atgaatct 68
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 98 tcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggagga 157
||||||| || ||| |||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 158 agta 161
||||
Sbjct: 8 agta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || |||||||||| ||||| |||||||| |||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 68 atga 71
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 43 atttcccacattcatattgatgttaatgaatctagatagatat 85
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 atttcccacattcatattgatgttaatgaatctagatagatat 83
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||| ||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 85 aatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 79.8 bits (40), Expect = 1e-14
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctaga-atgacttacgttgtgaaa 150
|||||||||||||||| ||||||||||||| ||||| |||| ||||||| ||||||||
Sbjct: 75 ctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaaa 16
Query: 151 cggaggaagta 161
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 111 tatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 49/51 (96%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcata 58
||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 85 tatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgtt 144
|||||| ||||||||||||||| | ||||| ||| | |||| ||||||||||||| ||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 145 gtgaaacggaggaagta 161
|||||||||||||||||
Sbjct: 123 gtgaaacggaggaagta 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| || |||||||||| ||||| | ||| ||||| |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 79 atgaatctaga 69
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 108 taatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 66 taatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtac 120
Score = 77.8 bits (39), Expect = 4e-14
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatatt 60
|||||||||||||||||||||| || |||||||||| ||||||||||||||||||
Sbjct: 121 tgtacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 60.0 bits (30), Expect = 1e-08
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 16 tccgtttcacaatgta-gtcattctagtatttcccacattcatattgatg 64
||||||||||||| || |||||||||| |||||||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacgga 154
||||||||| ||| |||||||||||||||||| ||||||||||||
Sbjct: 57 aatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 111 tatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 77.8 bits (39), Expect = 4e-14
Identities = 49/51 (96%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcata 58
||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 123 aaatgctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||||||||| ||||||||| |||| |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacagagggagtac 4
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 47 cccacattcatattgatgttaatgaatctagatagatatatatgcctagattcattaaca 106
||||||||||||| |||||||| |||||||| | |||||| |||| |||||||||||||
Sbjct: 44 cccacattcatatatatgttaataaatctagacatatatatgtgccaagattcattaaca 103
Query: 107 ttaatatgaatgtggaaaatgctagaa 133
| |||||||||||| ||||||||||
Sbjct: 104 tatatatgaatgtgggcaatgctagaa 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctag 95
|||||| ||| ||||||||||||| |||||||||||||| | | ||||||||| ||||
Sbjct: 130 ttctagcattgcccacattcatatatatgttaatgaatcttggcacatatatatgtctag 71
Query: 96 attcattaacattaatatgaatgtgg 121
||| |||||||| ||||||||||||
Sbjct: 70 atttattaacatatatatgaatgtgg 45
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 83 tatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacg 142
|||| ||| ||||||| |||||||| ||||||||| ||| |||||||| |||||||| |
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 143 ttgtgaaacggaggaagta 161
|||||||||||||||||||
Sbjct: 118 ttgtgaaacggaggaagta 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||| | |||||| ||| |||||||| ||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 68 atgaatctaga 78
|| ||||||||
Sbjct: 76 ataaatctaga 66
Score = 75.8 bits (38), Expect = 2e-13
Identities = 48/50 (96%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgt-agtcattctagtatttcccacattca 56
||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 113 tgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||| |||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 127/154 (82%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||| |||||||| | | || || |||| || |||||||| | |||||||
Sbjct: 5 tacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
|||||| |||| | || || || ||||||||||||||| ||||| ||||| ||||
Sbjct: 65 atgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||| | ||||| |||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggaggaagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||||| || | |||||| ||| | ||||| ||||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| | | || ||||| ||| |||||||||||| | |||||||| | |||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaata 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|| || | ||||| |||| ||||||||||||||
Sbjct: 38 ttaaaaagtcttacattgtaaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||| ||| | |||||||||||||||||||||||||||||| || ||||||
Sbjct: 74 ctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaac 15
Query: 152 ggaggaagta 161
|||||||||
Sbjct: 14 agaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||| |||||| ||| || |||||||||| |||| ||||||||||| ||||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 68 atgaatctagatag 81
||||||||||||||
Sbjct: 65 atgaatctagatag 78
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 104 acattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||| ||||||||||||| |||||||| |||||||||| || ||||||||||| ||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||| ||||||||||| |||||| |||||| ||| |||||||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 100 attaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaag 159
||||| || ||||| ||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 84 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||||||||||||||||||| || |||||||||| |||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 75.8 bits (38), Expect = 2e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||| ||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 68 atgaatctagatagatat 85
|| ||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||| ||| |||||||| ||| |||||| ||||||||||||| |||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 122 ggagggagta 131
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| ||||||||| |||| ||| |||||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 68 atgaatctag 77
||||||||||
Sbjct: 71 atgaatctag 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggagg 156
|||||||| || ||||| |||||||||||| ||||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| |||||||||| |||||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 68 atgaatctagatagatat 85
|| ||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 84 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||||||||||||||||||| || |||||||||| |||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 100 attaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaag 159
||||| || ||||| ||||||| ||||||||||||||||||| |||||||||||||| ||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||| |||||||| |||||||||| ||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 51/54 (94%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatatt 60
||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 97 ttcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggagg 156
||||||||||| | ||| ||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 157 aagta 161
||||
Sbjct: 117 gagta 121
Score = 73.8 bits (37), Expect = 7e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || |||||||||| |||||||||||| ||| ||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 68 atgaa 72
|||||
Sbjct: 61 atgaa 57
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 83.8 bits (42), Expect = 7e-16
Identities = 90/106 (84%)
Strand = Plus / Plus
Query: 56 atattgatgttaatgaatctagatagatatatatgcctagattcattaacattaatatga 115
|||| |||||||||||||||||| | ||| |||| ||||||||||||| || | || |
Sbjct: 51 atatagatgttaatgaatctagaaacatacatatatctagattcattaatatctaaataa 110
Query: 116 atgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||| ||||||| || | ||||| |||||||||||||||||||
Sbjct: 111 atgtggacaatgctaaaaagtcttacattgtgaaacggaggaagta 156
Score = 77.8 bits (39), Expect = 4e-14
Identities = 127/154 (82%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| | | || ||| ||| ||||||| || | ||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||||| || ||| | |||||||||||||||| |||| ||||||| ||||
Sbjct: 96 atgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatg 39
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
||||| | ||||| || ||||||||||| ||||
Sbjct: 38 gtagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 104 acattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 125 atgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||| |||||||| |||||||||||||| ||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagta 111
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 104 acattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 83.8 bits (42), Expect = 7e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||| ||||||||| |||||| ||| |||||||| ||| ||||||||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||| ||| ||||| ||| ||| |||||||| |||||||||| ||||| |||
Sbjct: 74 ctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaac 15
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 14 ggagggagta 5
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 85 tatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgtt 144
|||||| |||||||||||| ||| ||||| ||| || |||||||| |||||||||| ||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 145 gtgaaacggaggaagta 161
|||||||||||||||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| |||||| ||| ||||| || ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||||||||| ||||||||| |||||||||||||| ||||
Sbjct: 87 aatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatg 64
|||| ||||||||||||||| || |||||| ||| |||| |||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatg 83
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||||||||||||| |||||| |||||||||||||| ||||
Sbjct: 57 aatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||||||||||||| |||||| |||||||||||||| ||||
Sbjct: 73 aatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||| |||||||||||||||||| || ||||||| |||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||| |||||||||||||||||| || ||||||| |||| ||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
|||||||||||| || ||||||||| || ||||||||||||||||||| || |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 153 gaggaagta 161
|||| ||||
Sbjct: 118 gagggagta 126
Score = 73.8 bits (37), Expect = 7e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| |||||||||| ||||| || |||||||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 68 atgaatcta 76
|||||||||
Sbjct: 66 atgaatcta 58
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatatt 60
|||||||||||||||||||| | ||||||||||| |||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 117 tgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 112 atgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
||||||| || |||||||| |||||||||| |||||||||||||| |||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagtac 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccaca 52
|||||||||||||||||||||| ||||||||||| |||| |||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgt-agtcattctagtatttcccacattcat 57
|||||| ||||||||||||||||| ||||||| ||| ||||||| |||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 81.8 bits (41), Expect = 3e-15
Identities = 51/53 (96%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatatt 60
||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 107 ttaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||
Sbjct: 55 ttaatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 132 aatgacttacgttgtgaaacggaggaagtac 162
|||||||||| |||||||||||||| |||||
Sbjct: 34 aatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||||||||||||| |||||| |||||||||||||| ||||
Sbjct: 57 aatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||| |||||| |||||||||||||| ||||
Sbjct: 73 aatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||| |||||||||||||||||| || ||||||| |||| ||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||| |||||||||||||||||| || ||||||| |||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 81.8 bits (41), Expect = 3e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatg 64
|||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||| |||| |||||||||||||| |||||||||||||| ||||
Sbjct: 57 aatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 62 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 77.8 bits (39), Expect = 4e-14
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattga 62
|||||||||||||||||||| || |||||||||| ||||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||| ||||||||||||||| |||||||||||||| ||||
Sbjct: 56 aatatgaatgtggaaa-tgctagaatgacttatattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 51/56 (91%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatattgat 63
|||| ||||||||||||||| | ||||||||||| |||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcattt-ccacattcatattgat 59
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 115 aatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagtac 117
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 114 gaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||| ||||||||||||||||||||| | |||||||||||||| ||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgt-agtcattctagtatttcccacatt 54
|||||| ||||||||||||||||| ||||||||||| |||| |||||||
Sbjct: 118 tgtactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 94/112 (83%)
Strand = Plus / Minus
Query: 53 ttcatattgatgttaatgaatctagatagatatatatgcctagattcattaacattaata 112
||||||| ||||| |||||||||| | | ||||||||| ||||||||||| |||| |||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatata 54
Query: 113 tgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtactt 164
||||||||| |||| ||||| | |||| | |||||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgttagaaagtcttataatatgaaacggaggaagtactt 2
Score = 54.0 bits (27), Expect = 6e-07
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 47 cccacattcatattgatgttaatgaatctagatagatatatatgcctagattcattaaca 106
||||||||||||| |||| |||||||||||| | |||||| || |||||||||| |||
Sbjct: 44 cccacattcatatatatgtcaatgaatctagacatatatatgtgtttagattcattgaca 103
Query: 107 ttaatatgaatgtggaaaatgctagaa 133
| ||||||| |||| ||| ||||||
Sbjct: 104 tctatatgaagatggacaattctagaa 130
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 114 gaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattc 55
|||||||||||||||||||||| ||||||||||| | || ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 86 atatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttg 145
||||| ||||||| |||||||| |||||||||||| |||||||||| | ||||| |||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 146 tgaaacggaggaagta 161
||||||||||||||||
Sbjct: 119 tgaaacggaggaagta 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| | | |||||| ||| ||||||||||||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 68 atgaatctaga 78
|| ||||||||
Sbjct: 74 ataaatctaga 64
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 87 tatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgt 146
|||| ||||||| |||||||| ||||||||||||| ||||||||||| |||||| || |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 147 gaaacggaggaagta 161
|||||||||| ||||
Sbjct: 123 gaaacggagggagta 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| || ||||||| ||| |||||||||||| |||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 68 atgaatctaga 78
|| ||||||||
Sbjct: 77 ataaatctaga 67
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 113 tgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||| ||||||||||| |||||| || ||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattca 56
|||||||||||||||| ||||| ||| ||||||| ||| ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcattgcccacattca 53
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 77.8 bits (39), Expect = 4e-14
Identities = 77/90 (85%), Gaps = 6/90 (6%)
Strand = Plus / Minus
Query: 38 ctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctagat 97
|||| ||||||||||||||||||||||| |||||||||||| || ||| ||||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctagacag------atgtctagat 35
Query: 98 tcattaacattaatatgaatgtggaaaatg 127
||||| |||| ||||||||||||| |||||
Sbjct: 34 tcattgacatcaatatgaatgtgggaaatg 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 76/89 (85%), Gaps = 6/89 (6%)
Strand = Plus / Plus
Query: 43 atttcccacattcatattgatgttaatgaatctagatagatatatatgcctagattcatt 102
||||||||||||||||||||||| ||||||||||| | || || |||||||||||
Sbjct: 6 atttcccacattcatattgatgtcaatgaatctag------acatctgtctagattcatt 59
Query: 103 aacattaatatgaatgtggaaaatgctag 131
|||| ||||||||||||| |||||||||
Sbjct: 60 gacatcaatatgaatgtgggaaatgctag 88
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 77.8 bits (39), Expect = 4e-14
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 47 cccacattcatattgatgttaatgaatctagatagatatatatgcctagattcattaaca 106
||||||||||||| |||| |||||||||||| | |||| | ||||||||||||||| ||
Sbjct: 98 cccacattcatatagatgcaaatgaatctagacatatatgtgtgcctagattcattagca 39
Query: 107 ttaatatgaatgtggaaaatgctagaa 133
| |||||||||||| ||||||||||
Sbjct: 38 tagatatgaatgtgggcaatgctagaa 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctag 95
|||||| ||| ||||||||||||| ||| |||||||||||| | | ||||||| ||||
Sbjct: 12 ttctagcattgcccacattcatatctatgctaatgaatctaggcacacatatatgtctag 71
Query: 96 attcattaacattaatatgaatgtgg 121
||||||| ||| ||||||||||||
Sbjct: 72 attcatttgcatctatatgaatgtgg 97
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 82 atatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttac 141
||||| ||| |||||||||||||||| ||||||||||||| |||||||||| | |||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttac 112
Query: 142 gttgtgaaacggaggaagtactt 164
|| |||||| |||| |||||||
Sbjct: 113 attatgaaacagagggagtactt 135
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||| | ||||| || ||||| ||||||||||
Sbjct: 56 atatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| |||| |||||| |||||| | | |||||| ||| |||||||||||| ||||||
Sbjct: 133 gtactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtt 74
Query: 67 aatgaatctaga 78
||||||||||||
Sbjct: 73 aatgaatctaga 62
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 127/155 (81%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||| |||||| |||||| | | |||||| || ||||||||||||| ||||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | | ||||||| |||||||||| | || |||||||||||| ||||
Sbjct: 65 atgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaatg 124
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtac 162
||| || | ||||| || |||||| |||| |||||
Sbjct: 125 ctaaaaagtcttacattatgaaaccgagggagtac 159
Score = 77.8 bits (39), Expect = 4e-14
Identities = 96/115 (83%)
Strand = Plus / Minus
Query: 47 cccacattcatattgatgttaatgaatctagatagatatatatgcctagattcattaaca 106
||||||||||||| ||| | |||||||||| | | |||| | || |||||||||||||||
Sbjct: 119 cccacattcatatagatatcaatgaatctaaacatatatgtgtgtctagattcattaaca 60
Query: 107 ttaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
| |||||||||||| || ||||||| | ||||| || |||||| |||||||||
Sbjct: 59 tatatatgaatgtgggcaaggctagaaagtcttacattatgaaaccgaggaagta 5
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 77.8 bits (39), Expect = 4e-14
Identities = 73/84 (86%), Gaps = 4/84 (4%)
Strand = Plus / Minus
Query: 38 ctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctagat 97
|||| ||| ||||||||||||| ||||||||||||||||||| |||||| ||||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctagata----tatatgtctagat 35
Query: 98 tcattaacattaatatgaatgtgg 121
|||||||||| ||||||||||||
Sbjct: 34 tcattaacatatatatgaatgtgg 11
Score = 71.9 bits (36), Expect = 3e-12
Identities = 73/85 (85%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 47 cccacattcatattgatgttaatgaatctagatagatatatatgcctagattcattaaca 106
||||||||||||| ||||||||||||||||| | |||||| |||||||||||||||
Sbjct: 10 cccacattcatatatatgttaatgaatctagacatatatat----ctagattcattaaca 65
Query: 107 ttaatatgaatgtggaaaatgctag 131
| |||||||||||| ||||||||
Sbjct: 66 tatatatgaatgtgggcaatgctag 90
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 77.8 bits (39), Expect = 4e-14
Identities = 85/99 (85%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagatatatatgcctag 95
|||||| ||| ||||||||||||| |||||||||||||||||||| || || || ||||
Sbjct: 131 ttctagcattgcccacattcatatagatgttaatgaatctagatatatgtaggtgtctag 72
Query: 96 attca-ttaacattaatatgaatgtggaaaatgctagaa 133
||| | ||||||| |||||||||||| ||||||||||
Sbjct: 71 attaatttaacatctatatgaatgtgggtaatgctagaa 33
Score = 71.9 bits (36), Expect = 3e-12
Identities = 106/128 (82%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 36 ttctagtatttcccacattcatattgatgttaa-tgaatctagatagatatatatgccta 94
|||||| ||| ||||||||||||| |||||||| | |||||||| | || |||| |||
Sbjct: 33 ttctagcattacccacattcatatagatgttaaattaatctagacacctacatatatcta 92
Query: 95 gattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacgga 154
||||||||||||| |||||||||||| |||||||||| | |||| | |||||||||
Sbjct: 93 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacgga 152
Query: 155 ggaagtac 162
|| |||||
Sbjct: 153 gggagtac 160
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||||||| | ||| || ||||||||| ||||||||| |||||||||
Sbjct: 74 ctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaac 15
Query: 152 ggaggaagta 161
||| ||||||
Sbjct: 14 ggaagaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggagg 156
||||||||||| |||||| || ||||||||| ||||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggagg 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||| ||||||||||||| || |||||| ||| |||| || ||| | ||| ||||||
Sbjct: 5 tacttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatgtta 64
Query: 68 atgaatctagatagatat 85
||||||||||| ||||||
Sbjct: 65 atgaatctagacagatat 82
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
||||||| |||||||| ||||||||||||| |||||||||| | ||||| |||||||||
Sbjct: 71 ctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaac 130
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 131 ggagggagta 140
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||||||||||||||||| | | |||||| ||| |||||||||||| |||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 68 atgaatctaga 78
|| ||||||||
Sbjct: 80 ataaatctaga 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||| |||| ||||||| || | ||||| |||||||||||||| ||||
Sbjct: 56 atatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 84 atatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgactta 140
||||||| |||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 31 agtcattctagtatttcccacattcatattgatgttaatgaatctaga 78
||||||||||| ||||| |||||||||||||||| |||||||||||||
Sbjct: 102 agtcattctagcatttctcacattcatattgatgctaatgaatctaga 55
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 73.8 bits (37), Expect = 7e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatg 64
|||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||| |||| ||||||||||||||||||| |||||||||||||| ||||
Sbjct: 57 aatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 117 tgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||| |||||||||||||| |||| |||| ||||||||| ||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagggagta 107
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||| || |||||||||||||||||| || |||||||||||||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagtac 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| ||||||||| |||| |||| || ||||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatat 59
|||||||||||||||||| ||||| ||||||||||| ||| | ||||||||||
Sbjct: 138 tgtacttcctccgtttcataatgtaagtcattctagcattgtctacattcatat 85
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
||||||||||||| || ||||| || ||| ||| ||||||||||||| || ||||||
Sbjct: 74 ctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaac 15
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 14 ggagggagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 7e-13
Identities = 106/128 (82%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagata--tatatgcct 93
|||||| ||| ||||||||||||| |||||||||||||||| | | | | ||||| |
Sbjct: 132 ttctagcattgcccacattcatatagatgttaatgaatctatacacacacatatatatat 73
Query: 94 agattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacgg 153
|||||||||||||| |||||||||||| |||||||||| | |||| | ||||||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacgg 13
Query: 154 aggaagta 161
||||||||
Sbjct: 12 aggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagata--tatatgcct 93
|||||| ||| ||||||||||||| |||||||||||||||| ||| ||| | | || |
Sbjct: 33 ttctagcattgcccacattcatatagatgttaatgaatctatatatatatgtgtgtgtat 92
Query: 94 agattcattaacattaatatgaatgtggaaaatgctagaa 133
|||||||||||||| |||||||||||| ||||||||||
Sbjct: 93 agattcattaacatctatatgaatgtgggcaatgctagaa 132
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 102 taacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||| || ||||||||| ||||||||| ||||||||| |||||||||||||||||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
Query: 162 c 162
|
Sbjct: 138 c 138
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatattgatgt 65
|||||||||||||||||||||| | ||||||| ||| |||| ||||||||| |||||||
Sbjct: 139 tgtacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgt 80
Query: 66 ta 67
||
Sbjct: 79 ta 78
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
|||||||||||| || ||||| || || |||||||||||||||||| ||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 153 gagg 156
||||
Sbjct: 13 gagg 10
Score = 56.0 bits (28), Expect = 2e-07
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 14 cctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaatgaa 72
||||||||||||||| || |||||||||| ||||| || || |||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Query: 73 tcta 76
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||||||| |||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgat 63
|||| ||||||||||||||| || |||||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtg-aaacggaggaagta 161
||||||||||||| |||||||||||||||||| ||||| ||||||||||||||
Sbjct: 63 aatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagta 116
Score = 63.9 bits (32), Expect = 7e-10
Identities = 52/56 (92%), Gaps = 2/56 (3%)
Strand = Plus / Minus
Query: 9 tacttcctccgttt-cacaatgta-gtcattctagtatttcccacattcatattga 62
|||||||||||||| |||||| || |||||||||| ||||||||||||||||||||
Sbjct: 116 tacttcctccgttttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 85 tatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgtt 144
|||||| ||||||||| |||||| ||| |||||||||||||| ||||||||||||| ||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Query: 145 gtgaaacggaggaagta 161
| ||||||||| ||||
Sbjct: 122 ataaaacggagggagta 138
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||| ||||| ||||||||||||| || ||||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||| ||||||||||| |||||| ||||||||| ||||| ||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 79/92 (85%), Gaps = 6/92 (6%)
Strand = Plus / Plus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagata----gatat--atat 89
|||||| ||| ||||||||||||| |||||||||||||||||||| ||||| || |
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctagatatatggatattaatgt 64
Query: 90 gcctagattcattaacattaatatgaatgtgg 121
| |||||||||||||||| ||||||||||||
Sbjct: 65 gtctagattcattaacatccatatgaatgtgg 96
Score = 60.0 bits (30), Expect = 1e-08
Identities = 77/93 (82%), Gaps = 6/93 (6%)
Strand = Plus / Minus
Query: 47 cccacattcatattgatgttaatgaatctagatagatatatatgc------ctagattca 100
||||||||||||| |||||||||||||||||| | || |||| | |||||||||
Sbjct: 97 cccacattcatatggatgttaatgaatctagacacattaatatccatatatctagattca 38
Query: 101 ttaacattaatatgaatgtggaaaatgctagaa 133
||||||| |||||||||||| ||||||||||
Sbjct: 37 ttaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 71.9 bits (36), Expect = 3e-12
Identities = 129/156 (82%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| |||| ||||||||||||| | | |||||| ||| ||||||||||| | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacat-ta-atatgaatgtggaaaa 125
||||||||| | | || ||| || ||||||||||||||| || ||||| ||||| ||
Sbjct: 65 atgaatctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagcaa 124
Query: 126 tgctagaatgacttacgttgtgaaacggaggaagta 161
||||| || | ||||| |||||||||||||| ||||
Sbjct: 125 tgctaaaaagtcttacattgtgaaacggagggagta 160
Score = 71.9 bits (36), Expect = 3e-12
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 62 atgttaatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtgg 121
||||||||||||||| | | ||| ||||| ||||||||||||||| | ||||||||||
Sbjct: 104 atgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgg 45
Query: 122 aaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||| | ||||| ||||||||| |||| ||||
Sbjct: 44 gtaatgctagaaagtcttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 123 aaatgctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgt-agtcattctagtatttc 47
||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 31 agtcattctagtatttcccacattcatattgatgttaatgaatc 74
||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 2 agtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 33 tcattctagtatttcccacattcatattgatgttaatgaatc 74
||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 95 gattcattaacattaatatgaatgtggaaaatgctagaatgactt 139
||||||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 95 gattcattaacattaatatgaatgtggaaaatgctagaatga 136
||||||||| ||| ||||||||||||| ||||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||| ||||||| ||||||||||||||||||| |||||||||||||| ||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 115 aatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||| ||||||||||||||||||| |||||||||||||| ||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 63.9 bits (32), Expect = 7e-10
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatat 59
|||| |||||||||||||||||| |||||||||| |||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacgg 153
|||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 61.9 bits (31), Expect = 3e-09
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacatt 54
|||| |||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 56.0 bits (28), Expect = 2e-07
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 17 ccgtttcacaatgta-gtcattctagtatttcccacattcatat 59
||||||||||||||| |||||||||| |||||||||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 116 atgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
|||||| ||||||||||||||||||| |||||||||||||| |||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgt-agtcattctagtatttcccacat 53
||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 124 aatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||| |||||||||||||| ||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtact 163
||||| || |||| ||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 57 aatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtact 3
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatattga 62
||||| ||||||||||||||||| ||||||||||| ||||||||| || |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 124 aatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||||| |||||||||||| ||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaagaagta 104
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 123 aaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||||||| |||||||||||||||||||
Sbjct: 88 aaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 102 taacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||| ||| ||||||||| |||||||||||| ||||| |||||||||||||| ||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || || ||||||| |||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttc 47
|||||||||||||||||||||| ||||||||||| |||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttc 87
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 69.9 bits (35), Expect = 1e-11
Identities = 126/157 (80%), Gaps = 12/157 (7%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| | | |||||| ||| | |||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 68 atgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||||| | |||||||||||||||| ||||| |||||| ||||
Sbjct: 65 atgaatctagaca-----------ctagattcattaacatctatatgtatgtgggcaatg 113
Query: 128 ctagaatgacttacgttgtgaaacggaggaagtactt 164
|||||| | ||||| || ||||||||||| |||||||
Sbjct: 114 ctagaaagtcttacattatgaaacggagggagtactt 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 124/155 (80%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
||||| ||||||||||| |||||| | | |||||| ||| ||||||| ||||| ||||||
Sbjct: 148 gtactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtt 89
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
||||||||||| || |||||||||||||||| | |||||||| |||
Sbjct: 88 aatgaatctag-----------tgtctagattcattaacatctaagtgaatgtgagcaat 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagta 161
||||||| | ||||| |||||||||||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||| ||||||||||| |||||| | | |||||| ||| ||||||||||||| |||||
Sbjct: 142 tgtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 83
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 82 taatgaatcta 72
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
||||||||||||||| |||||||||||| |||||||||| | ||||| || |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 153 gaggaagtac 162
|||| |||||
Sbjct: 132 gagggagtac 141
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 100 attaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaag 159
||||| || ||||| |||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 160 ta 161
||
Sbjct: 107 ta 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||| | ||||||||||||||| |||||| |||||||| |||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 68 at 69
||
Sbjct: 48 at 47
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 129 tagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||| |||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 108 taatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||| ||| ||| |||||| |||||||||||||||||||
Sbjct: 87 taatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatatt 60
|||||||||||||||||||||| ||| ||| ||| ||||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||| |||| || ||| |||||| |||||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatatt 60
|||||||||||||||||||||| ||| ||| || ||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 104 acattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||| |||||||||||| ||||| ||| |||||||||| |||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||| |||||||||||||||||| |||||| |||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||| ||||| |||||||||||||| || ||||| ||||| ||||
Sbjct: 64 aatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattga 62
|||| ||||| ||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 116 atgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||| ||||||||||||||||||| ||||| |||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacat 53
||||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 127 gctagaatgacttacgttgtgaaacggaggaagtac 162
||||||||||||||| |||||||||||||| |||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagtac 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgt-agtcattctag 41
||||| ||||||||||||||||| |||||||||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcattctag 61
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 95/115 (82%), Gaps = 4/115 (3%)
Strand = Plus / Minus
Query: 47 cccacattcatattgatgttaatgaatctagatagatatatatgcctagattcattaaca 106
||||||| |||| |||||||||||||||| ||| |||| | |||||||||||||||
Sbjct: 115 cccacatacataaagatgttaatgaatctaaatacatatgt----ctagattcattaaca 60
Query: 107 ttaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
| | |||||||||| || |||| || | ||||| |||||||||||||||||||
Sbjct: 59 tctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
||||||||||||||||||||||| | | || ||| || ||||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||| ||||||| ||||||||||||| |||||||||| | ||||| || ||||||
Sbjct: 39 ctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaac 98
Query: 152 ggagg 156
|||||
Sbjct: 99 ggagg 103
Score = 52.0 bits (26), Expect = 2e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 14 cctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgttaatgaa 72
||||||||||| |||||| | | |||||| ||| |||||||||||| |||||||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 73 tctaga 78
||||||
Sbjct: 43 tctaga 38
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 82 atatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttac 141
|||| ||||||||||||| ||||||| |||||||||||| |||||||||| | ||||
Sbjct: 84 atatgtatgcctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttat 25
Query: 142 gttgtgaaacggaggaagta 161
| ||||||||||||||||
Sbjct: 24 aatatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctag 77
|||||| ||| ||||||||||||| |||||||| ||||||||
Sbjct: 33 ttctagcattgcccacattcatatagatgttaacgaatctag 74
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 98 tcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggagga 157
||||| |||| ||||| |||||| |||||||||||||||||| |||| ||||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 158 agta 161
||||
Sbjct: 90 agta 93
Score = 63.9 bits (32), Expect = 7e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||| ||||| || |||||||||| ||||| |||||| |||||||||| |
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgtaa 34
Query: 68 atga 71
||||
Sbjct: 33 atga 30
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 82 atatatatgcctagattcattaacattaatatgaatgtggaaaatgctagaa 133
||||||||| |||||||||||||||| |||||||||||| ||||||||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaa 104
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctagatagatatat 87
|||||| ||| ||||||||||||| ||||||||||||||||| | ||||||
Sbjct: 104 ttctagcattacccacattcatatatatgttaatgaatctagacatatatat 53
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 112 atgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtact 163
||||||||| |||||||||||||| |||| |||||||||||||| ||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagtact 3
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 31 agtcattctagtatttcccacattcatattgatgttaatgaat 73
||||||| ||| |||||||||||||||||||||| ||||||||
Sbjct: 91 agtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggag 155
|||||||| ||| ||||||||||||| |||||||| |||||||| | ||||| |||| |
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacgagg 108
Query: 156 gaagta 161
||||||
Sbjct: 109 gaagta 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgt-agtcattctagtatttcccacattcat 57
||||| ||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| ||||||||||||| |||||||||| | |||| | ||||||
Sbjct: 66 ctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataatatgaaac 125
Query: 152 ggaggaagtact 163
|||||||||||
Sbjct: 126 agaggaagtact 137
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 48 ccacattcatattgatgttaatgaatctaga 78
|||||||||||| |||||||||||||||||
Sbjct: 95 ccacattcatatatatgttaatgaatctaga 65
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatattgatgt 65
|||||| ||||||||||||||||| ||||||| ||| ||||| || ||| ||||||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgt 62
Query: 66 taa 68
|||
Sbjct: 63 taa 65
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 101 ttaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagt 160
||||||| ||||| ||| || |||||||| |||||||||| |||||||||||||| |||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 161 ac 162
||
Sbjct: 5 ac 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 101 ttaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagt 160
||||||| ||||| ||| || |||||||| ||||||||| ||||||||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 161 a 161
|
Sbjct: 122 a 122
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||| | ||||||| ||| ||||| || ||| ||||||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 68 a 68
|
Sbjct: 62 a 62
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||| |||||| | | |||||| ||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 68 atgaatctaga 78
|||||| ||||
Sbjct: 65 atgaatttaga 75
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 96 attcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggag 155
|||||||||||| |||||||||||| |||||||||| | ||||| || ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 156 gaagta 161
| ||||
Sbjct: 10 ggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||| |||||||||| | ||||| || ||||||||||| |||||
Sbjct: 91 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtac 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||| ||||||||||| |||||| | | |||||| ||| ||||||||||||| |||||
Sbjct: 144 tgtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 123 aaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||||||||||| ||||||||||||| |||||
Sbjct: 51 aaatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 128 ctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||| |||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtat 44
|||||||||||||||||||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtat 41
Score = 54.0 bits (27), Expect = 6e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacatt 54
||||| |||||||||||||||| ||||||||||| |||||| |||||
Sbjct: 89 tacttactccgtttcacaatgtaagtcattctagcatttcctacatt 43
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgtag-tcattctagtatttcccacattcatattgatgtta 67
|||| |||| |||||| |||||| ||||||||| ||| ||||||| ||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 68 atgaatctaga 78
|||||||||||
Sbjct: 72 atgaatctaga 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 124 aatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||||||||| || ||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| ||||| |||||| ||||||||||||| |||| || ||||||
Sbjct: 63 ctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaac 122
Query: 152 ggaggaagta 161
|||| ||||
Sbjct: 123 agagggagta 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatat 59
|||||||||||||||| ||||| ||||||||||| ||| |||| || |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattacccatatgcatat 56
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 128/159 (80%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 8 gtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtt 66
|||||||||||| |||| ||| || | | |||||| ||| ||||| |||| || |||||
Sbjct: 159 gtacttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgtc 100
Query: 67 aatgaatctagatagatatatatgcctagattcattaacattaatatgaatgtggaaaat 126
|||||||||||| | || || || ||||| ||||||||| |||||||||| | | |
Sbjct: 99 aatgaatctagacacatgtaagtgtatagatccattaacatctatatgaatgtaaacagt 40
Query: 127 gctagaatgacttacgttgtgaaacggaggaagtacttt 165
||||||| | ||||| || ||||||||||| ||||||||
Sbjct: 39 gctagaaagtcttacattatgaaacggagggagtacttt 1
Score = 54.0 bits (27), Expect = 6e-07
Identities = 93/115 (80%)
Strand = Plus / Plus
Query: 50 acattcatattgatgttaatgaatctagatagatatatatgcctagattcattaacatta 109
|||||||||| |||||||||| ||||| | | || || || ||||||||||| ||||
Sbjct: 47 acattcatatagatgttaatggatctatacacttacatgtgtctagattcattgacatct 106
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtactt 164
|| |||| |||| |||||||||| | |||| || |||| ||||||||||||||
Sbjct: 107 atgtgaacgtgggcaatgctagaaagtcttatattatgaagcggaggaagtactt 161
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatctaga 78
|||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 98 ttctagcattgcccacattcatatagatgttaatgaatctaga 56
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
|||||||||||||||| |||||||||||| |||||||||| | |||| | ||||||
Sbjct: 57 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 116
Query: 152 ggaggaagta 161
||||||||||
Sbjct: 117 ggaggaagta 126
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 116 atgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||| ||||||||||||||||||| || ||||||||||| ||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacat 53
|||| ||||||||||| |||||| |||||||||| |||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 7 tgtacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgt 65
|||||||||| ||||||| ||| || ||||||||| ||||| |||||| |||| || |
Sbjct: 3 tgtacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaat 62
Query: 66 taatgaatctagata 80
|| ||||||||||||
Sbjct: 63 tagtgaatctagata 77
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 116 atgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||||||||| |||||||||||||| || ||||||||||| ||||
Sbjct: 50 atgtggaaaatactagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacat 53
|||| ||||||||||| |||||| ||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattttccacat 50
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 109 aatatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
||||| ||| |||||||||||||||||||||| || ||||| ||||| ||||
Sbjct: 87 aatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 92 ctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaac 151
||||||| |||||||| ||||||||||||| |||||||||| | ||||| || |||||
Sbjct: 74 ctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaat 15
Query: 152 ggaggaagta 161
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 48 ccacattcatattgatgttaatgaatctagata 80
|||||||||||| ||||||||| ||||||||||
Sbjct: 45 ccacattcatatagatgttaataaatctagata 77
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
||||||||||||||| |||||||||||| |||||||||| | |||| | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 153 gaggaagtacttt 165
|||||||||||||
Sbjct: 124 gaggaagtacttt 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatcta 76
|||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 87 tatgcctagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgt 146
|||| |||||||||||||||| |||| ||| |||| |||||||||| | ||||| || |
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattat 122
Query: 147 gaaacggag 155
|||||||||
Sbjct: 123 gaaacggag 131
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 43 atttcccacattcatattgatgttaatgaatctagatagatatat 87
|||||||||||||||||||||| ||||||| ||||| | ||||||
Sbjct: 6 atttcccacattcatattgatgctaatgaaactagacatatatat 50
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 43 atttcccacattcatattgatgttaatgaatctagatagatatat 87
|||||||||||||||||||||| |||| |||||||| | ||||||
Sbjct: 111 atttcccacattcatattgatgctaataaatctagacatatatat 67
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 82 atatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| |||| ||||||| ||| ||||||||||||| |||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 82 atatatatgcctagattcattaacattaatatgaatgtggaaaatg 127
||||||||| ||||||| |||| ||| ||||||||||||| |||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
|||||||| |||||| | |||||||||| || |||||||| | ||||| ||||||||||
Sbjct: 72 tagattcaataacatctaaatgaatgtggcaa-tgctagaaagtcttacattgtgaaacg 130
Query: 153 gaggaagta 161
|||||||||
Sbjct: 131 gaggaagta 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatattgatgtta 67
|||||||||||||||||||||| || | |||||| | || |||||||||| | |||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagca-ttgccacattcatttagatgtta 81
Query: 68 atgaatcta 76
||||||||
Sbjct: 80 ttgaatcta 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 124 aatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||| | |||| |||||||||||||||||||
Sbjct: 42 aatgctagaaaggcttagattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
||||||||||||||| |||||||||||| |||||||||| | |||| | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 153 gaggaagtacttt 165
|||||||||||||
Sbjct: 124 gaggaagtacttt 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatcta 76
|||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
||||||||||||||| ||||| |||||| |||||||||| | |||| ||||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 153 gaggaagta 161
|||| ||||
Sbjct: 128 gagggagta 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || | | |||||| ||| ||||||| ||||| |||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 68 atgaatcta 76
|||||||||
Sbjct: 76 atgaatcta 68
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 93 tagattcattaacattaatatgaatgtggaaaatgctagaatgacttacgttgtgaaacg 152
||||||||||||||| ||||| |||||| |||||||||| | |||| ||||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 153 gaggaagta 161
|||| ||||
Sbjct: 13 gagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gtcattctagtatttcccacattcatattgatgtta 67
|||| ||||||||||||||| || | | |||||| ||| ||||||| ||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 68 atgaatcta 76
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagtac 162
|||||||||||| || ||||||| | ||||| ||||||||||||||||||||
Sbjct: 56 atatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 8 gtacttcctccgtttcacaatgt-agtcattctagtatttcccacattcatattgatg 64
||||||||||||||||||||||| || | |||||| || ||||||||||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagatg 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 110 atatgaatgtggaaaatgctagaatgacttacgttgtgaaacggaggaagta 161
|||||||||||| |||||||||| ||||| |||||||||||||| ||||
Sbjct: 69 atatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 36 ttctagtatttcccacattcatattgatgttaatgaatcta 76
|||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 33 ttctagaattgcccacattcatatagatgttaatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 47 cccacattcatattgatgttaatgaatcta 76
||||||||||||| ||||||||||||||||
Sbjct: 121 cccacattcatatagatgttaatgaatcta 92
