miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 133 bits (67), Expect = 1e-30
Identities = 100/111 (90%), Gaps = 5/111 (4%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga-----tagatacattaacatcaa 159
||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 39 catttcccacattcatattgatgttaatgaatctagacattctagattcattaacatcaa 98
Query: 160 tatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||| || |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 99 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 125 bits (63), Expect = 3e-28
Identities = 99/111 (89%), Gaps = 5/111 (4%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga-----tagatacattaacatcaa 159
||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 115 catttcccacattcatattgatgttaatgaatctagaatgtctagattcattaacatcaa 56
Query: 160 tatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||| || |||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 55 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 138 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 92
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 81 tagattcattaacatcaatatgaatgtgggaaatgctagaa 121
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 131 bits (66), Expect = 4e-30
Identities = 99/109 (90%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagat--agatacattaacatcaatat 162
||||||||||||||||||| ||||||||| ||||| || ||||||||||||||||||||
Sbjct: 112 catttcccacattcatattgatgttaatgtatctatatctagatacattaacatcaatat 53
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||| || ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 52 gaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtat 4
Score = 123 bits (62), Expect = 1e-27
Identities = 98/109 (89%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagata--gatacattaacatcaatat 162
||||| ||||||||||||| ||||||||| ||||||||| |||||||||||||||||||
Sbjct: 39 cattttccacattcatattgatgttaatgtatctagatatagatacattaacatcaatat 98
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||| || |||||||||||||||||||| ||||| | |||||| |||||
Sbjct: 99 gaatgtgggaaatgctagaatgacttacattgtggaacggaggaagtat 147
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 17 cacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 132 cacaatgtaagtcattctagcatttcccacattcatattgatgt 89
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||| ||||||||||||||||||| || |||||||||||
Sbjct: 73 tagatacattaacatcaatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 129 bits (65), Expect = 2e-29
Identities = 96/106 (90%), Gaps = 4/106 (3%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 106 catttcccatattcatattgatgttaatgaatctagatt----cattaacatcaatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 50 atatgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 115 bits (58), Expect = 3e-25
Identities = 95/107 (88%), Gaps = 4/107 (3%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 39 catttcccatattcatattgatgttaatgaatctagatt----cattaacatcaatatga 94
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||| |||||||||||||||||||| || |||| |||||| |||||
Sbjct: 95 atatgggaaatgctagaatgacttacattatgaaacggaggaagtat 141
Score = 93.7 bits (47), Expect = 9e-19
Identities = 84/97 (86%), Gaps = 7/97 (7%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtag-------taga 66
|||||||||||||||||||||| ||||||||| ||||||||| |||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctaga 75
Query: 67 ttcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||||| ||||||||||||
Sbjct: 76 ttcattaacatcaatatgaatatgggaaatgctagaa 112
Score = 85.7 bits (43), Expect = 2e-16
Identities = 83/97 (85%), Gaps = 7/97 (7%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtag-------taga 66
||||| |||||||||||||||| ||||||||| ||||||||| |||| ||||
Sbjct: 129 tttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctaga 70
Query: 67 ttcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||||| ||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatatgggaaatgctagaa 33
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 127 bits (64), Expect = 7e-29
Identities = 96/106 (90%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||||||||||||| || ||| |||||||||||||||||
Sbjct: 39 catttcccacattcatattgatgttaatgaatc---attgattcattaacatcaatatga 95
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| |||||||||||||||||| |||| ||||||| |||||||||||
Sbjct: 96 atgtgagaaatgctagaatgaattacattgtgaaacggagggagta 141
Score = 103 bits (52), Expect = 1e-21
Identities = 93/106 (87%), Gaps = 3/106 (2%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
|||||| |||||||||||| ||||||||||||| | ||| |||||||||||||||||
Sbjct: 107 catttctcacattcatattgatgttaatgaatcaat---gattcattaacatcaatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || |||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 84/98 (85%), Gaps = 8/98 (8%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatg--------tagtag 65
|||||||||||||||||||||| ||||||||||||||||||| ||| | | |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcattg 75
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||| |||||||||||||||
Sbjct: 76 attcattaacatcaatatgaatgtgagaaatgctagaa 113
Score = 63.9 bits (32), Expect = 8e-10
Identities = 82/98 (83%), Gaps = 8/98 (8%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgta---gta-----g 65
||||||||||||| |||||||| |||||| |||||||||||| |||| | | |
Sbjct: 130 tttcacaatgtaattcattctagcatttctcacattcatattgatgttaatgaatcaatg 71
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||| || ||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 123 bits (62), Expect = 1e-27
Identities = 98/109 (89%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagat--agatacattaacatcaatat 162
|||||| |||||||||||| |||||||||||||||||| |||| |||||| ||||||||
Sbjct: 39 catttctcacattcatattgatgttaatgaatctagatgtagattcattaatatcaatat 98
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||| ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 99 aaatatggaaaatgctagaatgacttacattgtgaaacggagggagtat 147
Score = 99.6 bits (50), Expect = 2e-20
Identities = 89/101 (88%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagat--agatacattaacatcaatat 162
||||| ||| ||| ||||| || |||||||||||| || |||| |||||||||||||||
Sbjct: 112 cattttccatatttatattgatattaatgaatctacatctagattcattaacatcaatat 53
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccgga 203
|||| ||||||||||||||||||||||| ||||||| ||||
Sbjct: 52 gaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaa 33
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| |||||| |||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| ||||| ||| ||| |||||
Sbjct: 135 tttcacaatgtaagtcattctagcattttccatatttatatt 94
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 119 bits (60), Expect = 2e-26
Identities = 96/107 (89%), Gaps = 2/107 (1%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
|||||| |||||||||||| || |||||||||||||||| | |||| ||||||||||||
Sbjct: 39 catttctcacattcatattgatattaatgaatctagata--tccattgacatcaatatga 96
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||| |||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 97 atatgggaaatgctagaatgacttacattgtgaaacggaggaagtat 143
Score = 101 bits (51), Expect = 4e-21
Identities = 93/106 (87%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||| ||||||||| |||| |||| || | ||||| |||||| ||||||||||
Sbjct: 108 catttcccatattcatattgatgtcaatggatatc--tagattcattaatatcaatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| ||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 50 atgtgagaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 83/99 (83%), Gaps = 9/99 (9%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt---------agta 64
|||||||||||||||||||||| ||||||||| ||||||||| |||| ||
Sbjct: 131 tttcacaatgtaagtcattctagcatttcccatattcatattgatgtcaatggatatcta 72
Query: 65 gattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||| |||||||||||| |||||||||||||||
Sbjct: 71 gattcattaatatcaatatgaatgtgagaaatgctagaa 33
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatatt 57
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 69 cattaacatcaatatgaatatgagaaatgctagaa 103
|||| ||||||||||||||||| ||||||||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaa 114
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 117 bits (59), Expect = 6e-26
Identities = 96/107 (89%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga-tagatacattaacatcaatatg 163
|||||| |||||| ||||| |||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 39 catttctcacatttatattgatgttaataaatctagtctagattcattaacatcaatatg 98
Query: 164 aatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||| ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 99 aatatggaaaatgctagaatgacttacattgtgaaacggagggagta 145
Score = 107 bits (54), Expect = 6e-23
Identities = 91/102 (89%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga-tagatacattaacatcaatatg 163
||||| ||| ||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 111 cattttccatattcatattgatgttaatgaatctagactagatttattaacatcaatata 52
Query: 164 aatatgagaaatgctagaatgacttacgttgtgaaccggagg 205
||| ||||||||||||||||||||||| || |||| ||||||
Sbjct: 51 aatgtgagaaatgctagaatgacttacattatgaaacggagg 10
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 77 tagattcattaacatcaatatgaatatggaaaatgctagaa 117
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||| ||| ||||||||| ||||
Sbjct: 134 tttcacaatgtaagtcattctagcattttccatattcatattgatgt 88
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||| |||||||||||||| ||| |||||||||||||||
Sbjct: 73 tagatttattaacatcaatataaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 117 bits (59), Expect = 6e-26
Identities = 95/108 (87%), Gaps = 8/108 (7%)
Strand = Plus / Plus
Query: 103 aacatttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatat 162
||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 38 aacatttcccacattcatattgatgttaatgaatctagatagat--------atcaatat 89
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||| |||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 90 gaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 89.7 bits (45), Expect = 1e-17
Identities = 82/92 (89%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt--tatgta-gtagattca 70
|||||||||||||||||||||| ||||||||| ||||||||| ||| || ||||||||
Sbjct: 126 tttcacaatgtaagtcattctagcatttcccatattcatattgatatctatctagattca 67
Query: 71 ttaacatcaatatgaatatgagaaatgctaga 102
||||||||||||||||| || |||||| ||||
Sbjct: 66 ttaacatcaatatgaatgtgggaaatgttaga 35
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctaga-atgacttacgttgtgaacc 200
||||| ||||||||||||||||||| || |||||| |||| ||||||| ||||||| |
Sbjct: 74 tagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaaac 15
Query: 201 ggagggagta 210
||||||||||
Sbjct: 14 ggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcat-tctaacatttcccacattcatatttatgt 60
|||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcccctctaacatttcccacattcatattgatgt 63
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 76 atcaatatgaatatgagaaatgctagaa 103
||||||||||||||| ||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaa 109
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 117 bits (59), Expect = 6e-26
Identities = 95/108 (87%), Gaps = 8/108 (7%)
Strand = Plus / Minus
Query: 103 aacatttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatat 162
||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 104 aacatttcccacattcatattgatgttaatgaatctagatagat--------atcaatat 53
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||| |||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 52 gaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 4e-18
Identities = 83/93 (89%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt--tatgta-gtagattca 70
|||||||||||||||||||||| ||||||||| ||||||||| ||| || ||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcatattgatatctatctagattca 75
Query: 71 ttaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||| || |||||| |||||
Sbjct: 76 ttaacatcaatatgaatgtgggaaatgttagaa 108
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||| ||||||||||||| ||||||| ||
Sbjct: 68 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 127
Query: 202 gagggagta 210
|||||||||
Sbjct: 128 gagggagta 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 125 tttcacaatgtaagtcattctaacatttcccacattcatattgatgt 79
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 115 bits (58), Expect = 3e-25
Identities = 86/94 (91%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 118 catatttatgttaatgaatctaga-tagatacattaacatcaatatgaatatgagaaatg 176
|||||| |||||||||||||| | ||||| |||||||||||||||||||||| ||||||
Sbjct: 46 catattcatgttaatgaatcttgtctagattcattaacatcaatatgaatatgggaaatg 105
Query: 177 ctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||| ||||||| |||||||||||
Sbjct: 106 ctagaatgacttacattgtgaaacggagggagta 139
Score = 81.8 bits (41), Expect = 4e-15
Identities = 92/108 (85%), Gaps = 7/108 (6%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga-tagatacattaacatcaatatg 163
||||||||| ||||||||| ||||||||||||||||| |||| ||||||| |||
Sbjct: 105 catttcccatattcatattgatgttaatgaatctagacaagattcattaac------atg 52
Query: 164 aatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||| |||||||||||||||||||| || |||| |||||| |||||
Sbjct: 51 aatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 4
Score = 81.8 bits (41), Expect = 4e-15
Identities = 82/96 (85%), Gaps = 6/96 (6%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtag------tagat 67
||||| |||||||||||||||| ||||||||| |||||| || ||| | |||||
Sbjct: 16 tttcataatgtaagtcattctagcatttcccatattcatgttaatgaatcttgtctagat 75
Query: 68 tcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||| ||||||||||||
Sbjct: 76 tcattaacatcaatatgaatatgggaaatgctagaa 111
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||| ||||||||| ||||
Sbjct: 128 tttcacaatgtaagtcattctagcatttcccatattcatattgatgt 82
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 115 bits (58), Expect = 3e-25
Identities = 97/109 (88%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagat--agatacattaacatcaatat 162
|||||| |||||||||||| |||||||||||||||||| |||| |||||| ||||||||
Sbjct: 39 catttctcacattcatattgatgttaatgaatctagatgtagattcattaatatcaatat 98
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||| |||||||| |||||||||| ||||||| ||||||||||||
Sbjct: 99 aaatatggaaaatgctataatgacttacattgtgaaacggagggagtat 147
Score = 99.6 bits (50), Expect = 2e-20
Identities = 89/101 (88%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagat--agatacattaacatcaatat 162
||||| ||| ||| ||||| || |||||||||||| || |||| |||||||||||||||
Sbjct: 112 cattttccatatttatattgatattaatgaatctacatctagattcattaacatcaatat 53
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccgga 203
|||| ||||||||||||||||||||||| ||||||| ||||
Sbjct: 52 gaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaa 33
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| |||||| |||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||||||| || ||||| ||| ||| |||||
Sbjct: 135 tttcacaatgtaagtcattatagcattttccatatttatatt 94
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 115 bits (58), Expect = 3e-25
Identities = 94/106 (88%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||||| || |||||||| | || ||| |||||||||||||
Sbjct: 110 catttcccacattcatattgatgttcataaatctagacaaattcatgaacatcaatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || |||||||||||||| ||||| ||||||| |||||||||||
Sbjct: 50 atgtgggaaatgctagaatggcttacattgtgaaacggagggagta 5
Score = 99.6 bits (50), Expect = 2e-20
Identities = 92/106 (86%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||||| |||||| | ||||| || |||||||||||||
Sbjct: 39 catttcccacattcatattgatgttcatgaatttgtctagatttatgaacatcaatatga 98
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || |||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 99 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 144
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 133 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 87
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagccattctagcatttcccacattcatattgatgt 62
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 115 bits (58), Expect = 3e-25
Identities = 86/94 (91%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 118 catatttatgttaatgaatctaga-tagatacattaacatcaatatgaatatgagaaatg 176
|||||| |||||||||||||| | ||||| |||||||||||||||||||||| ||||||
Sbjct: 98 catattcatgttaatgaatcttgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 177 ctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||| ||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 82/96 (85%), Gaps = 6/96 (6%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtag------tagat 67
||||| |||||||||||||||| ||||||||| |||||| || ||| | |||||
Sbjct: 128 tttcataatgtaagtcattctagcatttcccatattcatgttaatgaatcttgtctagat 69
Query: 68 tcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatatgggaaatgctagaa 33
Score = 81.8 bits (41), Expect = 4e-15
Identities = 92/108 (85%), Gaps = 7/108 (6%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga-tagatacattaacatcaatatg 163
||||||||| ||||||||| ||||||||||||||||| |||| ||||||| |||
Sbjct: 39 catttcccatattcatattgatgttaatgaatctagacaagattcattaac------atg 92
Query: 164 aatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||| |||||||||||||||||||| || |||| |||||| |||||
Sbjct: 93 aatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||| ||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcatattgatgt 62
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 113 bits (57), Expect = 1e-24
Identities = 96/108 (88%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga--tagatacattaacatcaatat 162
||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 112 catttcccacattcatattgatgttaatgaaactagacatagattcattaacatcaatat 53
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||| || ||||||||||||||||||| || |||| |||||| ||||
Sbjct: 52 gaatgtggaaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 95/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagat--agatacattaacatcaatat 162
||||| ||||||||||||| ||||||||||||||| | || | |||||||||||||||
Sbjct: 39 cattttccacattcatattgatgttaatgaatctatgtctagtttcattaacatcaatat 98
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||| || |||||||||||||||||||| ||||||| | |||||||||
Sbjct: 99 gaatgtgggaaatgctagaatgacttacattgtgaaaccgagggagta 146
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 135 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 89
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| |||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatattgatgt 62
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 67 ttcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||| || ||||||||||||
Sbjct: 82 ttcattaacatcaatatgaatgtgggaaatgctagaa 118
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 113 bits (57), Expect = 1e-24
Identities = 96/108 (88%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga--tagatacattaacatcaatat 162
||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 39 catttcccacattcatattgatgttaatgaatctagatctagattcattaacatcaatat 98
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||| |||||||||||||||||| ||||| | |||||| ||||
Sbjct: 99 gaatatagtaaatgctagaatgacttatattgtggaacggaggaagta 146
Score = 101 bits (51), Expect = 4e-21
Identities = 87/98 (88%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 115 attcatatttatgttaatgaatctagat--agatacattaacatcaatatgaatatgaga 172
||||||||| |||||||||||||||||| |||| ||||||||||||||||||| || ||
Sbjct: 102 attcatattgatgttaatgaatctagatctagattcattaacatcaatatgaatgtggga 43
Query: 173 aatgctagaatgacttacgttgtgaaccggagggagta 210
|||| || |||||||||| || |||| |||||||||||
Sbjct: 42 aatggtaaaatgacttacattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| ||||||||||||| || ||||||||||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattttaccatttcccacattcatattgatgt 62
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||||| |||||||||||
Sbjct: 78 tagattcattaacatcaatatgaatatagtaaatgctagaa 118
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatg 97
||||||||||||||||||||||||| || ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 113 bits (57), Expect = 1e-24
Identities = 96/108 (88%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga--tagatacattaacatcaatat 162
||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 112 catttcccacattcatattgatgttaatgaatctagatctagattcattaacatcaatat 53
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||| |||||||||||||||||| ||||| | |||||| ||||
Sbjct: 52 gaatatagtaaatgctagaatgacttatattgtggaacggaggaagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 87/98 (88%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 115 attcatatttatgttaatgaatctagat--agatacattaacatcaatatgaatatgaga 172
||||||||| |||||||||||||||||| |||| ||||||||||||||||||| || ||
Sbjct: 49 attcatattgatgttaatgaatctagatctagattcattaacatcaatatgaatgtggga 108
Query: 173 aatgctagaatgacttacgttgtgaaccggagggagta 210
|||| || |||||||||| || |||| |||||||||||
Sbjct: 109 aatggtaaaatgacttacattatgaaacggagggagta 146
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| ||||||||||||| || ||||||||||||||||||| ||||
Sbjct: 135 tttcataatgtaagtcattttaccatttcccacattcatattgatgt 89
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||||| |||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatagtaaatgctagaa 33
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatg 97
||||||||||||||||||||||||| || ||||||
Sbjct: 78 tagattcattaacatcaatatgaatgtgggaaatg 112
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 113 bits (57), Expect = 1e-24
Identities = 93/105 (88%)
Strand = Plus / Minus
Query: 106 atttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatgaa 165
|||||||||||||||| | |||||||| |||||||||| ||| |||||||||| ||||||
Sbjct: 109 atttcccacattcatagtgatgttaataaatctagatatatatattaacatcactatgaa 50
Query: 166 tatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
| ||| ||||||||||||||||||| || |||| |||||| ||||
Sbjct: 49 tgtgaaaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 112 cacattcatatttatgttaatgaatctagatagatacattaacatcaatatgaatatgag 171
|||||||||| | |||||||| || || ||||| |||||||||| ||||||| || |
Sbjct: 46 cacattcatagtgatgttaatatatatatctagatttattaacatcactatgaatgtggg 105
Query: 172 aaatgctagaatgacttacgttgtgaaccggagggagta 210
|||| |||||||||||||| || |||| | |||||||||
Sbjct: 106 aaatactagaatgacttacattatgaaacagagggagta 144
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcata 53
||||| |||||||||||||||| ||||||||||||||||
Sbjct: 133 tttcataatgtaagtcattctagtatttcccacattcata 94
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcata 53
||||| |||||||||||||||| ||||| ||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttttcacattcata 55
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 70 attaacatcaatatgaatatgagaaatgctagaa 103
|||||||||| ||||||| ||| |||||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaa 33
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 113 bits (57), Expect = 1e-24
Identities = 97/110 (88%), Gaps = 4/110 (3%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata----cattaacatcaat 160
||||||||||||| ||||| ||||||||||||||||| | ||| |||||||||||||
Sbjct: 39 catttcccacatttatattaatgttaatgaatctagacatatatattcattaacatcaat 98
Query: 161 atgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||| || |||||||||||||||||||| ||||||| ||| |||||||
Sbjct: 99 atgaatgtgggaaatgctagaatgacttacattgtgaaacggggggagta 148
Score = 99.6 bits (50), Expect = 2e-20
Identities = 96/111 (86%), Gaps = 4/111 (3%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga----tagatacattaacatcaat 160
||||||||||||||||||| |||||||||||| || | ||||| ||||||||| |||
Sbjct: 114 catttcccacattcatattgatgttaatgaatatatatgtctagattcattaacattaat 55
Query: 161 atgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|| ||| || |||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 54 ataaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 137 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 91
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||| ||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatattaatgt 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||| || ||||||||||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaa 120
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||| ||||| ||| || ||||||||||||
Sbjct: 73 tagattcattaacattaatataaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 109 bits (55), Expect = 2e-23
Identities = 97/111 (87%), Gaps = 5/111 (4%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctag-----atagatacattaacatcaa 159
||||| ||||||||||||| ||||||||||||||| |||| | ||||||||||||
Sbjct: 39 cattttccacattcatattgatgttaatgaatctatgtgacatagtttcattaacatcaa 98
Query: 160 tatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||| ||||||||||||||||||||||| ||||||| | |||||||||
Sbjct: 99 tatgaatgtgagaaatgctagaatgacttacattgtgaaaccgagggagta 149
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/111 (84%), Gaps = 5/111 (4%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctag-----atagatacattaacatcaa 159
|||||| |||||||||||| ||||||||||| ||| |||||| ||||||||||||
Sbjct: 115 catttctcacattcatattgatgttaatgaaactatgtcacatagattcattaacatcaa 56
Query: 160 tatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||| || ||||||||||||||||||| || |||| |||||| ||||
Sbjct: 55 tatgaatgtggaaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| |||||| |||||||||||| ||||
Sbjct: 138 tttcacaatgtaagtcattctagcatttctcacattcatattgatgt 92
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 67 ttcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||| |||||||||||||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaa 121
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| |||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatattgatgt 62
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || |||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 109 bits (55), Expect = 2e-23
Identities = 95/107 (88%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgtta-atgaatctagatagatacattaacatcaatatg 163
||||||||||||||||||| ||| || || ||||| ||||| ||||||||||||||
Sbjct: 39 catttcccacattcatattgatgatagatagatctatctagatttattaacatcaatata 98
Query: 164 aatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 99 aatatgagaaatgctagaatgacttacattgtgaaacggagggagta 145
Score = 85.7 bits (43), Expect = 2e-16
Identities = 92/107 (85%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacat-taacatcaatatg 163
|||||| || ||| ||||| |||||||| ||||||||||||| || || ||||||||||
Sbjct: 111 catttctcatatttatattgatgttaataaatctagatagatctatctatcatcaatatg 52
Query: 164 aatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||| || ||||||||| |||||||||| ||||||| |||||| ||||
Sbjct: 51 aatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 85/102 (83%), Gaps = 12/102 (11%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatg-tag---------- 62
||||||||||||||||||| || ||||||||||||||||||| ||| |||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattgatgatagatagatctat 75
Query: 63 -tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||| |||||||||||||| |||||||||||||||||||
Sbjct: 76 ctagatttattaacatcaatataaatatgagaaatgctagaa 117
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| |||||| || ||| ||||| ||||
Sbjct: 134 tttcacaatgtaagtcattctagcatttctcatatttatattgatgt 88
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 107 bits (54), Expect = 6e-23
Identities = 82/90 (91%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
|||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgt-ttagattcatta 74
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
|||||||||||||| || || |||||||||
Sbjct: 75 acatcaatatgaatgtgggatatgctagaa 104
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 152 aacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||||||||| || ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || || |||||||||||||||| ||||||| ||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 202 gagggagta 210
|||| ||||
Sbjct: 124 gaggaagta 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||| |||||||||||| ||| ||||||||||||||| ||||
Sbjct: 121 tttcacaatataagtcattctagcatatcccacattcatattgatgt 75
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 83/92 (90%), Gaps = 2/92 (2%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtag--tagattcat 71
||||| |||||||||||||||| ||||||||||||||||||| |||| | |||||||||
Sbjct: 124 tttcataatgtaagtcattctagcatttcccacattcatattgatgttgtctagattcat 65
Query: 72 taacatcaatatgaatatgagaaatgctagaa 103
| |||||||||||||| || ||||||||||||
Sbjct: 64 tgacatcaatatgaatgtgggaaatgctagaa 33
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||| |||||||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagtat 211
|||| |||||
Sbjct: 13 gaggaagtat 4
Score = 83.8 bits (42), Expect = 9e-16
Identities = 89/106 (83%), Gaps = 9/106 (8%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| |||| |||||||||||| | ||||||||||||
Sbjct: 39 catttcccacattcatattgatgtcaatgaatctagaca---------acatcaatatga 89
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || |||||||||||||||||||| || |||| |||||||||||
Sbjct: 90 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||||||||||||||||||||||||||| || |||| ||
Sbjct: 73 tagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgagaaatgctagaa 33
Score = 61.9 bits (31), Expect = 3e-09
Identities = 89/107 (83%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacat-taacatcaatatg 163
|||||| || ||||||||| ||||||||||||||||| | ||| || || | | ||||
Sbjct: 39 catttctcatattcatattgatgttaatgaatctagacatatatatctatctagattatg 98
Query: 164 aatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||| || |||||||||||||||||||| |||| || |||||| ||||
Sbjct: 99 aatgtgggaaatgctagaatgacttacattgtaaaacggaggaagta 145
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| |||||||||||||||| |||||| || ||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcatttctcatattcatattgatgt 62
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 103 bits (52), Expect = 1e-21
Identities = 90/103 (87%), Gaps = 6/103 (5%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
|||||| ||||||||||||||||| |||||||||||| | |||||| ||||||||
Sbjct: 104 catttctcacattcatatttatgtcaatgaatctagacatatacat------caatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|| ||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 50 atgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 93.7 bits (47), Expect = 9e-19
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgta-----gtagatt 68
|||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgtatatgtctagatt 75
Query: 69 cattaacatcaatatgaatatgagaaatgctagaa 103
|||| |||| ||||||||| |||||||||||||||
Sbjct: 76 cattgacataaatatgaatgtgagaaatgctagaa 110
Score = 83.8 bits (42), Expect = 9e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||| |||| ||||||||| ||||||||||||||||||||||| ||||||| ||
Sbjct: 70 tagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 129
Query: 202 gaggga 207
||||||
Sbjct: 130 gaggga 135
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 127 tttcacaatgtaagtcattctagcatttctcacattcatatttatgt 81
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 103 bits (52), Expect = 1e-21
Identities = 95/107 (88%), Gaps = 3/107 (2%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||| |||||||||||| | |||||||| |||||||||||
Sbjct: 39 catttcccacattcatattgatgctaatgaatctagct--atacattagcatcaatatga 96
Query: 165 atatgagaaatgctaga-atgacttacgttgtgaaccggagggagta 210
|| || ||||||||| | ||||||||| ||||||| |||||||||||
Sbjct: 97 atgtgggaaatgctaaacatgacttacattgtgaaacggagggagta 143
Score = 93.7 bits (47), Expect = 9e-19
Identities = 92/106 (86%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||
Sbjct: 108 catttcccacattcatattgatgctaatgtat--agctagattcattagcatcaatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || ||||||||| |||||||||| ||||||| |||||| ||||
Sbjct: 50 atgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||||||| || |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 81/97 (83%), Gaps = 10/97 (10%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcat-tctaacatttcccacattcatatttatg--------tag-t 63
|||||||||||||||||| | || ||||||||||||||||||| ||| ||| |
Sbjct: 132 tttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatgtatagct 73
Query: 64 agattcattaacatcaatatgaatatgagaaatgcta 100
|||||||||| ||||||||||||| || |||||||||
Sbjct: 72 agattcattagcatcaatatgaatgtgggaaatgcta 36
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 103 bits (52), Expect = 1e-21
Identities = 95/107 (88%), Gaps = 3/107 (2%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||| |||||||||||| | |||||||| |||||||||||
Sbjct: 109 catttcccacattcatattgatgctaatgaatctagct--atacattagcatcaatatga 52
Query: 165 atatgagaaatgctaga-atgacttacgttgtgaaccggagggagta 210
|| || ||||||||| | ||||||||| ||||||| |||||||||||
Sbjct: 51 atgtgggaaatgctaaacatgacttacattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 9e-19
Identities = 92/106 (86%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||
Sbjct: 40 catttcccacattcatattgatgctaatgtat--agctagattcattagcatcaatatga 97
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || ||||||||| |||||||||| ||||||| |||||| ||||
Sbjct: 98 atgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 143
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||||||| || |||||||||||||||||||
Sbjct: 132 tttcacaatgtaagtcattttagcatttcccacattcatatt 91
Score = 56.0 bits (28), Expect = 2e-07
Identities = 81/97 (83%), Gaps = 10/97 (10%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcat-tctaacatttcccacattcatatttatg--------tag-t 63
|||||||||||||||||| | || ||||||||||||||||||| ||| ||| |
Sbjct: 16 tttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatgtatagct 75
Query: 64 agattcattaacatcaatatgaatatgagaaatgcta 100
|||||||||| ||||||||||||| || |||||||||
Sbjct: 76 agattcattagcatcaatatgaatgtgggaaatgcta 112
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 1e-21
Identities = 94/106 (88%), Gaps = 4/106 (3%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||||||||||||||| || ||| ||||||| |||||||
Sbjct: 106 catttcccacattcatattgatgttaatgaatcta--tacata--ttaacattaatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || |||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 1e-21
Identities = 94/106 (88%), Gaps = 4/106 (3%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| |||||||| || || ||||| |||||||||||||||||
Sbjct: 39 catttcccacattcatattaatgttaat--atgta--tagattcattaacatcaatatga 94
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 95 atgtgggaaatgctagaatgacttatattgtgaaacggagggagta 140
Score = 97.6 bits (49), Expect = 6e-20
Identities = 86/98 (87%), Gaps = 9/98 (9%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt--------tatgtagtag 65
|||||||||||||||||||||| ||||||||||||||||||| |||||| |||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattaatgttaatatgta-tag 74
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||| || ||||||||||||
Sbjct: 75 attcattaacatcaatatgaatgtgggaaatgctagaa 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct: 129 tttcacaatataagtcattctagcatttcccacattcatattgatgt 83
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 101 bits (51), Expect = 4e-21
Identities = 92/106 (86%), Gaps = 6/106 (5%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||| ||||||||| ||| ||||| |||||||||||
Sbjct: 104 catttcccacattcatattgatgctaatgaatc------gattcattagcatcaatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 9e-19
Identities = 91/106 (85%), Gaps = 6/106 (5%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||| ||||||||| ||| ||||| |||||||||||
Sbjct: 39 catttcccacattcatattgatgctaatgaatc------gattcattagcatcaatatga 92
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || |||||||||||||||||||| || |||| |||||||||||
Sbjct: 93 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatg-----tagtagatt 68
|||||||||||||||||||||| ||||||||||||||||||| ||| | | ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatcgatt 75
Query: 69 cattaacatcaatatgaatatgagaaatgctagaa 103
||||| ||||||||||||| || ||||||||||||
Sbjct: 76 cattagcatcaatatgaatgtgggaaatgctagaa 110
Score = 77.8 bits (39), Expect = 6e-14
Identities = 81/95 (85%), Gaps = 5/95 (5%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatg-----tagtagatt 68
||||| |||||||||||||||| ||||||||||||||||||| ||| | | ||||
Sbjct: 127 tttcataatgtaagtcattctagcatttcccacattcatattgatgctaatgaatcgatt 68
Query: 69 cattaacatcaatatgaatatgagaaatgctagaa 103
||||| ||||||||||||| || ||||||||||||
Sbjct: 67 cattagcatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 101 bits (51), Expect = 4e-21
Identities = 83/93 (89%), Gaps = 3/93 (3%)
Strand = Plus / Minus
Query: 11 ccatttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattca 70
|||||||| |||||||||||||||| |||||| ||||||||||||| | ||||||||
Sbjct: 122 ccatttcataatgtaagtcattctagcatttctcacattcatatttgt---ctagattca 66
Query: 71 ttaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||| |||||||| ||||||
Sbjct: 65 ttaacatcaatatgaatgtgagaaatactagaa 33
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| |||||||| |||||||||||||| || |||| ||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacg 14
Query: 202 gagggagtat 211
|||| |||||
Sbjct: 13 gaggaagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 158 aatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||| ||||||||||||||||||||||| || |||| ||||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 106 atttcccacattcatatttatgttaatgaatctaga 141
||||| |||||||||||| |||||||||||||||||
Sbjct: 40 atttctcacattcatattgatgttaatgaatctaga 75
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| |||||||||||||||| ||||| |||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagtatttctcacattcatattgatgt 62
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 101 bits (51), Expect = 4e-21
Identities = 82/91 (90%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt-agtagattcatt 72
||||||||| ||||||||| || ||||| ||||||||||||| |||| | ||||||||||
Sbjct: 12 tttcacaatataagtcattatagcattttccacattcatattgatgttaatagattcatt 71
Query: 73 aacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||| || ||||||||||||
Sbjct: 72 aacatcaatatgaatgtgggaaatgctagaa 102
Score = 91.7 bits (46), Expect = 4e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 141 atagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaacc 200
|||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||| |
Sbjct: 61 atagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Query: 201 ggagggagta 210
|||||||||
Sbjct: 121 agagggagta 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 77/88 (87%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatg-tagtagattcatt 72
|||||||||||||||||||||| ||||||||||||||||||| ||| || | || |||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctatt 60
Query: 73 aacatcaatatgaatatgagaaatgcta 100
||||||||||||||| || ||||||||
Sbjct: 59 aacatcaatatgaatgtggaaaatgcta 32
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatcta 139
||||||||||||||||||| |||||||||||||||
Sbjct: 96 catttcccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 101 bits (51), Expect = 4e-21
Identities = 79/87 (90%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
|||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 121 tttcacaatgtaagacattctagcatttcccacattcatattgatgt-ctagattcatta 63
Query: 74 acatcaatatgaatatgagaaatgcta 100
||||||||| |||||| |||||||||
Sbjct: 62 gcatcaatataaatatgggaaatgcta 36
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||||||||| |||||| ||||||||| |||||||||| ||||| | ||
Sbjct: 73 tagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaacg 14
Query: 202 gagggagtat 211
||||||||||
Sbjct: 13 gagggagtat 4
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 153 acatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||| || |||||||||||||| ||||| ||||||| |||||| ||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 17 cacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||| || ||||||||| ||| |||||
Sbjct: 19 cacaatgtaagtcattatagcatttcccatatttatatt 57
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
|||||||||||||| || ||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaa 104
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 99.6 bits (50), Expect = 2e-20
Identities = 81/90 (90%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
|||||||||||||||||||||| ||||||||||||||||||| || | |||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatat-ctagattcatta 74
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
||| ||||||||| || ||||||||||||
Sbjct: 75 gcattaatatgaatgtgggaaatgctagaa 104
Score = 75.8 bits (38), Expect = 2e-13
Identities = 88/107 (82%), Gaps = 12/107 (11%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 98 catttcccacattcatattaatgctaatgaatctagata------------tcaatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|| || |||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||| ||||||||| || ||||||||||||||||||| ||||||| ||
Sbjct: 64 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 123
Query: 202 gagggagta 210
|||||||||
Sbjct: 124 gagggagta 132
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 121 tttcacaatataagtcattctagcatttcccacattcatatt 80
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 99.6 bits (50), Expect = 2e-20
Identities = 81/90 (90%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
|||||||||||||||||||||| ||||||||||||||||||| || | |||||||||||
Sbjct: 121 tttcacaatgtaagtcattctagcatttcccacattcatattgatat-ctagattcatta 63
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
||| ||||||||| || ||||||||||||
Sbjct: 62 gcattaatatgaatgtgggaaatgctagaa 33
Score = 75.8 bits (38), Expect = 2e-13
Identities = 88/107 (82%), Gaps = 12/107 (11%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 39 catttcccacattcatattaatgctaatgaatctagata------------tcaatatga 86
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|| || |||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 87 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 133
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||| ||||||||| || ||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 99.6 bits (50), Expect = 2e-20
Identities = 89/101 (88%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 113 acattcatatttatgttaatgaatctagat--agatacattaacatcaatatgaatatga 170
||||||||||| ||| |||||||| ||||| |||| ||||| ||||||||| |||||||
Sbjct: 104 acattcatattgatgctaatgaatttagatctagattcattagcatcaatataaatatga 45
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||| |||||||||||||| ||||||| ||||||||||||
Sbjct: 44 aaaatactagaatgacttacattgtgaaacggagggagtat 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 80/94 (85%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 119 atatttatgttaatgaatctagat--agatacattaacatcaatatgaatatgagaaatg 176
||||| ||| |||||||||||||| | || ||||| ||||||||||||| | |||||
Sbjct: 53 atattgatgctaatgaatctagatctaaattcattagcatcaatatgaatgtagaaaatg 112
Query: 177 ctagaatgacttacgttgtgaaccggagggagta 210
||||||||| |||| ||||||| |||||||||||
Sbjct: 113 ctagaatgatttacattgtgaaacggagggagta 146
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||| |||||||| ||||| | |||||||||||
Sbjct: 135 tttcacaatgtaaatcattctagcattttctacattcatatt 94
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||| ||||||||| ||||||| |||| ||||||
Sbjct: 73 tagattcattagcatcaatataaatatgaaaaatactagaa 33
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattcta 35
||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 2e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 141 atagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaacc 200
|||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||| |
Sbjct: 74 atagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaac 15
Query: 201 ggagggagta 210
||||||||||
Sbjct: 14 ggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 90 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 149
Query: 202 gagggagta 210
|||| ||||
Sbjct: 150 gaggaagta 158
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 101
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatggaaaatgctagaa 33
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 90 tagattcattaacatcaatatgaatgtgggaaatgctagaa 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||| ||| ||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccatattcatattgatgt 62
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 99.6 bits (50), Expect = 2e-20
Identities = 86/96 (89%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 11 ccatttcacaatgtaagtcattctaacatttcccacattcatatt---tatgtagtagat 67
||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||
Sbjct: 13 ccatttcacaatgtaagtcattctagcatttcccacattcatattatatatgt-ctagat 71
Query: 68 tcattaacatcaatatgaatatgagaaatgctagaa 103
||||||| || ||||||||| || ||||||||||||
Sbjct: 72 tcattaatataaatatgaatgtgggaaatgctagaa 107
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttat 58
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 124 tttcacaatgtaagtcattctagcatttcccacattcatatttat 80
Score = 77.8 bits (39), Expect = 6e-14
Identities = 89/107 (83%), Gaps = 9/107 (8%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
|||||||||||||||||||||| |||||||||||||| | ||| | ||||||
Sbjct: 101 catttcccacattcatatttatattaatgaatctagacatatata---------atatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|| || |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaatggagggagtat 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| || ||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 67 tagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 126
Query: 202 gagggagtat 211
|||| |||||
Sbjct: 127 gaggaagtat 136
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 89 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 148
Query: 202 gagggagta 210
|||||||||
Sbjct: 149 gagggagta 157
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 146 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 100
Score = 67.9 bits (34), Expect = 5e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 50 catatttatgtagtagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||| ||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct: 86 catatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 89 tagattcattaacatcaatatgaatgtgggaaatgctagaa 129
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 73.8 bits (37), Expect = 9e-13
Identities = 67/76 (88%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 135 atctagatagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttg 194
||||| |||||| |||||||||||||| ||| ||| |||||||||||||||||| |||
Sbjct: 83 atctatatagatttattaacatcaatataaatgtga--aatgctagaatgacttacattg 140
Query: 195 tgaaccggagggagta 210
|||| |||||||||||
Sbjct: 141 tgaaacggagggagta 156
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgct 99
|||||||||||||||||||||||||||| ||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgct 37
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||| | ||||||||| ||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattcaagcatttcccatattcatattgatgt 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttc 42
|||||||||||||||||||||| ||||||
Sbjct: 145 tttcacaatgtaagtcattctagcatttc 117
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 97.6 bits (49), Expect = 6e-20
Identities = 79/88 (89%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata--cattaacatcaatat 162
|||||| |||||||||||| ||| ||||||||||||| | ||| ||||| |||||||||
Sbjct: 91 catttctcacattcatattgatgctaatgaatctagacatatattcattagcatcaatat 32
Query: 163 gaatatgagaaatgctagaatgacttac 190
|||| |||||||||||||||||||||||
Sbjct: 31 gaatgtgagaaatgctagaatgacttac 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 76/87 (87%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatcta--gatagatacattaacatcaatat 162
|||||| |||||||||||| ||| |||||||| || ||||| ||||| |||||||||
Sbjct: 18 catttctcacattcatattgatgctaatgaatatatgtctagattcattagcatcaatat 77
Query: 163 gaatatgagaaatgctagaatgactta 189
|||| ||||||||||||||||||||||
Sbjct: 78 gaatgtgagaaatgctagaatgactta 104
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 57 tagattcattagcatcaatatgaatgtgagaaatgctagaa 97
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||| ||||||||||||| |||||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaa 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 20 aatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||| |||||| ||||||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatatt 36
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 24 taagtcattctaacatttcccacattcatatt 55
|||||||||||| |||||| ||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatatt 73
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||||||||||||||||||||||||||||||| || |||| ||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 202 gagggagta 210
|||||||||
Sbjct: 118 gagggagta 126
Score = 87.7 bits (44), Expect = 6e-17
Identities = 78/90 (86%), Gaps = 7/90 (7%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
||||||||| |||||||||||| ||||| ||||||| ||||||| |||||||||
Sbjct: 16 tttcacaatataagtcattctagcattttccacatttatattta-------gattcatta 68
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
| ||||||||||||||||||||||||||||
Sbjct: 69 atatcaatatgaatatgagaaatgctagaa 98
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||| |||||||||||||||| |||||| || |||||||||
Sbjct: 115 tttcataatgtaagtcattctagcatttctcatattcatatt 74
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 172 aaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||||| ||||||| |||||| ||||
Sbjct: 43 aaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 90 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 101
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttat 58
||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattatagcattttccacattcatatttat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
||||||||||||||||||| |||||||||||||||||
Sbjct: 124 catttcccacattcatattgatgttaatgaatctaga 88
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 90 tagattcattaacatcaatatgaatgtgggaaatgctagaa 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 149 attaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggag 208
||||| || ||||||||| || |||||||| |||||||||| ||||||| |||||||||
Sbjct: 66 attaatataaatatgaatgtggaaaatgctataatgacttacattgtgaaacggagggag 7
Query: 209 tat 211
|||
Sbjct: 6 tat 4
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||
Sbjct: 90 tagattcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| ||||||||||| | |||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| |||||| |||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcatattaatgt 101
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 90 tagattcattaacattaatatgaatgtgagaaatgctagaa 130
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||| |||| |||| ||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattacccatattcatat 56
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 73 tagattcattaacatccatatgaatatgggtaatgctagaa 33
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 97/119 (81%), Gaps = 12/119 (10%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagat------------agatacatta 152
||||||||||||||||||| |||||||||||||||||| |||| |||||
Sbjct: 39 catttcccacattcatattgatgttaatgaatctagataggcatatgtccagattcatta 98
Query: 153 acatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||| || || ||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 99 acatcaatataaacgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 157
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||| |||||||||||| |||||||||| || ||||| ||||
Sbjct: 145 tttcacaatataagtcattctagcatttcccacgtttatattgatgt 99
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 64 agattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||| || || ||||||||||||
Sbjct: 89 agattcattaacatcaatataaacgtgggaaatgctagaa 128
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||
Sbjct: 88 tagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacg 147
Query: 202 gagggagta 210
|||||||||
Sbjct: 148 gagggagta 156
Score = 73.8 bits (37), Expect = 9e-13
Identities = 67/76 (88%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 135 atctagatagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttg 194
||||| |||||| |||||||||||||| ||| ||| |||||||||||||||||| |||
Sbjct: 78 atctatatagatttattaacatcaatataaatgtga--aatgctagaatgacttacattg 21
Query: 195 tgaaccggagggagta 210
|||| |||||||||||
Sbjct: 20 tgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgct 99
|||||||||||||||||||||||||||| ||||||||
Sbjct: 88 tagattcattaacatcaatatgaatatgggaaatgct 124
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||| | ||||||||| ||||||||| ||||
Sbjct: 145 tttcacaatgtaagtcattcaagcatttcccatattcatattgatgt 99
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttc 42
|||||||||||||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 97.6 bits (49), Expect = 6e-20
Identities = 97/114 (85%), Gaps = 8/114 (7%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga--------tagatacattaacat 156
||||||||||||||||||| |||| |||||||||||| ||||| |||| ||||
Sbjct: 39 catttcccacattcatattgatgtcaatgaatctagacatctgtctagattcattgacat 98
Query: 157 caatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||| || |||||||||||||||||||| || |||| |||||||||||
Sbjct: 99 caatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 152
Score = 91.7 bits (46), Expect = 4e-18
Identities = 97/115 (84%), Gaps = 8/115 (6%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga--------tagatacattaacat 156
||||||||||||||||||| |||| |||||||||||| ||||| |||| ||||
Sbjct: 118 catttcccacattcatattgatgtcaatgaatctagacagatgtctagattcattgacat 59
Query: 157 caatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||| || |||||| ||||||||||||| ||||||| |||||| |||||
Sbjct: 58 caatatgaatgtgggaaatgatagaatgacttacattgtgaaacggaggaagtat 4
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctatcatttcccacattcatattgatgt 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| |||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 141 tttcataatgtaagtcattctagcatttcccacattcatattgatgt 95
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||| |||||||||||||| || ||||||||||||
Sbjct: 84 tagattcattgacatcaatatgaatgtgggaaatgctagaa 124
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||| |||||||||||||| || |||||| |||||
Sbjct: 73 tagattcattgacatcaatatgaatgtgggaaatgatagaa 33
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 98/120 (81%), Gaps = 14/120 (11%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata--------------cat 150
||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 39 catttcccacattcatattgatgttaatgaatctagatagatatatatgtctacattcat 98
Query: 151 taacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||| || ||||| ||||||||||||| ||||||| |||||| ||||
Sbjct: 99 taacatcaatatgaatgtgggaaatattagaatgacttacattgtgaaacggaggaagta 158
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctaatatttcccacattcatattgatgt 101
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 66 attcattaacatcaatatgaatatgagaaat 96
|||||||||||||||||||||| || |||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaat 123
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 93/106 (87%), Gaps = 4/106 (3%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||| ||||||||||||| ||||||||||||||| || ||| ||||||| |||||||
Sbjct: 106 cattttccacattcatattgatgttaatgaatcta--tacata--ttaacattaatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || |||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 93/106 (87%), Gaps = 4/106 (3%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| |||||||| || || ||||| |||||||||||||||||
Sbjct: 39 catttcccacattcatattaatgttaat--atgta--tagattcattaacatcaatatga 94
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || |||||||||||||||||| ||||||| |||||||||||
Sbjct: 95 atgtggaaaatgctagaatgacttatattgtgaaacggagggagta 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 85/98 (86%), Gaps = 9/98 (9%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt--------tatgtagtag 65
|||||||||||||||||||||| ||||||||||||||||||| |||||| |||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattaatgttaatatgta-tag 74
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||| || |||||||||||
Sbjct: 75 attcattaacatcaatatgaatgtggaaaatgctagaa 112
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||| |||||||||||| ||||| ||||||||||||| ||||
Sbjct: 129 tttcacaatataagtcattctagcattttccacattcatattgatgt 83
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 95.6 bits (48), Expect = 2e-19
Identities = 91/106 (85%), Gaps = 7/106 (6%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||| |||||||||| | ||||||||||||||||
Sbjct: 39 catttcccacattcatattgatggtaatgaatct-------tttattaacatcaatatga 91
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 92 atgtgggaaatgctagaatgacttactttgtgaaacggagggagta 137
Score = 89.7 bits (45), Expect = 1e-17
Identities = 82/94 (87%), Gaps = 4/94 (4%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatg----tagtagattc 69
|||||||| ||||||||||||| ||||||||||||||||||| ||| || ||||||
Sbjct: 126 tttcacaaagtaagtcattctagcatttcccacattcatattgatgttaataaaagattc 67
Query: 70 attaacatcaatatgaatatgagaaatgctagaa 103
|||| ||||||||||||| || ||||||||||||
Sbjct: 66 attaccatcaatatgaatgtgggaaatgctagaa 33
Score = 87.7 bits (44), Expect = 6e-17
Identities = 90/106 (84%), Gaps = 7/106 (6%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| |||||||| || |||| ||||| |||||||||||
Sbjct: 103 catttcccacattcatattgatgttaataaa-------agattcattaccatcaatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || |||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 82/94 (87%), Gaps = 4/94 (4%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttat-gtagtaga---ttc 69
|||||||||||||||||||||| ||||||||||||||||||| || ||| | | ||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatctttt 75
Query: 70 attaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||| || ||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaa 109
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 83/92 (90%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatg-tagt-agattcat 71
|||||| ||||||||||||||| |||||| |||||||||||| ||| || | ||||||||
Sbjct: 16 tttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatgagattcat 75
Query: 72 taacatcaatatgaatatgagaaatgctagaa 103
|| ||||||||||||| |||||||||||||||
Sbjct: 76 tagcatcaatatgaatgtgagaaatgctagaa 107
Score = 79.8 bits (40), Expect = 1e-14
Identities = 81/92 (88%), Gaps = 2/92 (2%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatg-tagtagat-tcat 71
||||||||| |||||||||||| |||||| |||||||||||| ||| || | || ||||
Sbjct: 124 tttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaatctcat 65
Query: 72 taacatcaatatgaatatgagaaatgctagaa 103
|| ||||||||||||| |||||||||||||||
Sbjct: 64 tagcatcaatatgaatgtgagaaatgctagaa 33
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 143 agatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccgg 202
|||| ||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 203 agggagta 210
||| ||||
Sbjct: 128 aggaagta 135
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||| ||||||||||||| ||||||||||||||||||||||| | ||||| | ||||||
Sbjct: 67 cattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggga 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 80/90 (88%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcatatctat---ctagattcatta 72
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
|||||||||||||| ||| ||||| |||||
Sbjct: 73 acatcaatatgaatgtgaaaaatgatagaa 102
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| ||| ||||| ||||||| ||||| || |||| ||
Sbjct: 62 tagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacg 121
Query: 202 gagggagta 210
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 63.9 bits (32), Expect = 8e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||| || ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 8e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 112 cacattcatatttatgttaatgaatctagatagata 147
|||||||||||| |||||||||||||||||||||||
Sbjct: 89 cacattcatattgatgttaatgaatctagatagata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| |||||||| ||||||| ||||| |||||||||||| ||||
Sbjct: 119 tttcataatgtaagccattctatcatttttcacattcatattgatgt 73
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 93.7 bits (47), Expect = 9e-19
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
|||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccgcattcatatatatgt-ctagattcatta 74
Query: 74 acatcaatatgaata 88
||||||||||||||
Sbjct: 75 tcatcaatatgaata 89
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||||||||||||| | |||||||| ||||||||| ||||||| ||
Sbjct: 64 tagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacg 123
Query: 202 gagg 205
||||
Sbjct: 124 gagg 127
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 171 gaaatgctagaatgacttacgttgtgaa 198
|||||||||||||||||||| |||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 91.7 bits (46), Expect = 4e-18
Identities = 88/101 (87%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 113 acattcatatttatgttaatgaatctagat--agatacattaacatcaatatgaatatga 170
||||| ||||| ||| |||||||| ||||| |||| ||||| ||||||||||||| |||
Sbjct: 104 acatttatattgatgctaatgaatttagatctagattcattagcatcaatatgaatgtga 45
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||| |||||| ||||||| ||||||||||||
Sbjct: 44 aaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 67.9 bits (34), Expect = 5e-11
Identities = 85/101 (84%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 112 cacattcatatttatgttaatgaatctaga--tagatacattaacatcaatatgaatatg 169
|||||||||||| ||| ||||||||||||| || || ||||| ||||||||| ||| |
Sbjct: 46 cacattcatattgatgctaatgaatctagatctaaattcattagcatcaatataaatgta 105
Query: 170 agaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||| ||||| |||| ||||||| |||||||||||
Sbjct: 106 gaaaatgctaaaatgatttacattgtgaaacggagggagta 146
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||| ||||||||||||| ||| |||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgaaaaatgctagaa 33
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||| |||||| ||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcatttttcacattcatatt 57
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 4e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||| |||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagtat 211
||||||||||
Sbjct: 13 gagggagtat 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata 147
||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 39 catttcccacattcatattgttgttaatgaatctagatagata 81
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||| |||||||||||||| | |||||||||||||||||||
Sbjct: 147 tttcataatgtaagtcattccaccatttcccacattcatatt 106
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||| |||||||||| || ||||||||||||
Sbjct: 73 tagattcattaacaacaatatgaatgtgggaaatgctagaa 33
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||||||||||||| || |||||| | ||||||||||| || |||| ||
Sbjct: 90 tagattcattaccatcaatatgaatgtgggaaatggtggaatgacttacattatgaaacg 149
Query: 202 gagggagta 210
|| ||||||
Sbjct: 150 gaaggagta 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatg 97
||||||||||| ||||||||||||| || ||||||
Sbjct: 90 tagattcattaccatcaatatgaatgtgggaaatg 124
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||
Sbjct: 90 tagattcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 149
Query: 202 gaggga 207
||||||
Sbjct: 150 gaggga 155
Score = 73.8 bits (37), Expect = 9e-13
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 156 tcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||||| ||||| ||||||||||||||||| ||||||| ||||||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacattgtgaaacggaggga 8
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| |||||| |||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcatattgatgt 101
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||| |||||||||||||| |||||||||||||||
Sbjct: 90 tagattcattgacatcaatatgaatgtgagaaatgctagaa 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatntctcacattcatatt 57
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
|||||| |||||||||||| |||| ||||||||||||
Sbjct: 124 catttctcacattcatattgatgtcaatgaatctaga 88
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 91.7 bits (46), Expect = 4e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 141 atagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaacc 200
|||||| |||||||||| |||||||| || |||||||||||||||||||| ||||||| |
Sbjct: 74 atagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Query: 201 ggagggagta 210
||||||||||
Sbjct: 14 ggagggagta 5
Score = 83.8 bits (42), Expect = 9e-16
Identities = 77/90 (85%), Gaps = 9/90 (10%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
|||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 113 tttcacaatgtaagtcattctagcatttcccacattcata---------tagattcatta 63
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
||||| |||||||| || ||||||||||||
Sbjct: 62 acatctatatgaatgtgggaaatgctagaa 33
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatat 56
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||| || |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatcta 139
|||||||||||||||||| |||||||||||||||
Sbjct: 39 catttcccacattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 91.7 bits (46), Expect = 4e-18
Identities = 87/101 (86%), Gaps = 6/101 (5%)
Strand = Plus / Minus
Query: 116 ttcatatttatgttaatgaatctagata------gatacattaacatcaatatgaatatg 169
|||||||| ||||||||||||||||||| ||| ||||||||||||||||||| ||
Sbjct: 105 ttcatattgatgttaatgaatctagatatgtttagattcattaacatcaatatgaatgtg 46
Query: 170 agaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||| ||||||||||||| ||||||| ||||| |||||
Sbjct: 45 ggaaatgttagaatgacttacattgtgaaacggagagagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctaacatttcccacattcatattgatgt 62
Score = 81.8 bits (41), Expect = 4e-15
Identities = 95/114 (83%), Gaps = 13/114 (11%)
Strand = Plus / Plus
Query: 103 aacatttcccacattcatatttatgttaatgaatctaga------tagatacattaacat 156
||||||||||||||||||||| ||||||||||||||| | ||||| |||||||||
Sbjct: 37 aacatttcccacattcatattgatgttaatgaatctaaacatatctagattcattaacat 96
Query: 157 caatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||| ||||||||||||||||||| ||||||| ||||| |||||
Sbjct: 97 caatatga-------aaatgctagaatgacttacattgtgaaacggagagagta 143
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || |||||| |||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaa 33
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaa 86
||||||||||||||||||||||||
Sbjct: 82 tagattcattaacatcaatatgaa 105
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacattt 41
|||||||||||||||||||||| |||||
Sbjct: 132 tttcacaatgtaagtcattctagcattt 105
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 150 ttaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagt 209
||||||||||||| |||||||||||||||| |||||||||| ||||||| ||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 210 a 210
|
Sbjct: 5 a 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 150 ttaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagt 209
||||||||||||| |||||||||||||||| ||||||||| ||||||| |||||| |||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 210 at 211
||
Sbjct: 122 at 123
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ttaacatcaatatgaatatgagaaatgcta 100
||||||||||||| ||||||||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgcta 36
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 ttaacatcaatatgaatatgagaaatgcta 100
||||||||||||| ||||||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgcta 91
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||| || |||||| || ||| ||||| ||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttctcatatttatattgatgt 62
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
||||||||||||||||||| |||||||||||||||||
Sbjct: 39 catttcccacattcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggtagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 90/106 (84%), Gaps = 4/106 (3%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||||||||||||||||| | ||| |||||||||||
Sbjct: 39 catttcccacattcatattgatgttaatgaatctagacatata----tacatcaatatgt 94
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| | ||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 95 atgtacaaaatgctagaatgacttacattgtgaaacggaggaagta 140
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 81/97 (83%), Gaps = 7/97 (7%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtag-------taga 66
|||||||||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 129 tttcacaatgtaagtcattctagcattttgtacatacatattgatgtatatatgtctaga 70
Query: 67 ttcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||| || ||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatggtagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|| ||||||
Sbjct: 13 gaaggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| |||||| |||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctaccatttctcacattcatattgatgt 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata 147
|||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 39 catttctcacattcatattgatgttaatgaatctagatagata 81
Score = 67.9 bits (34), Expect = 5e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| ||||| |||||| | ||||||||||||||||||| ||||||| ||
Sbjct: 90 tagattcattaatatcaacatgaatttagaaaatgctagaatgacttacattgtgaaacg 149
Query: 202 gagggagtat 211
||||||||||
Sbjct: 150 gagggagtat 159
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatggtagaa 33
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacattt 41
|||||||||||||||||||||| |||||
Sbjct: 147 tttcacaatgtaagtcattctagcattt 120
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 89.7 bits (45), Expect = 1e-17
Identities = 79/90 (87%), Gaps = 4/90 (4%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
||||| |||||||||||||||| ||||| ||| ||||||||| ||||| ||||||||
Sbjct: 118 tttcataatgtaagtcattctagcattttccatattcatattgatgta----attcatta 63
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||| |||||||||||
Sbjct: 62 acatcaatatgaatatggaaaatgctagaa 33
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| |
Sbjct: 67 cattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 153 acatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||||||||||| ||||||||||||||||||| || |||| ||||| |||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggagagagta 129
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||| ||| ||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccatattcatattgatgt 62
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || ||||||||||||||||||| ||||||| ||
Sbjct: 90 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcatattgatgt 101
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
||||| ||||||||||||| |||||||||||||||||
Sbjct: 124 cattttccacattcatattgatgttaatgaatctaga 88
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || |||||||||||
Sbjct: 90 tagattcattaacatcaatatgaatgtggaaaatgctagaa 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||| |||||||| || |||||||||||||| ||| ||||||| ||
Sbjct: 73 tagattcattagcatctatatgaatgtggacaatgctagaatgacatacattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||| ||||||||| |||| ||||||||||||
Sbjct: 16 tttcacaatgtatgtcattctagcattgtccacattcatat 56
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||| ||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 94 tagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacg 153
Query: 202 gagggagta 210
|||||||||
Sbjct: 154 gagggagta 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcata 53
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 151 tttcacaatgtaagtcattctagcatttcccacattcata 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 160 tatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||| |||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 55 tatgaatatgcgaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
||||||||||||||||| | |||||||||||||||||
Sbjct: 128 catttcccacattcatagtgatgttaatgaatctaga 92
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||| ||||||| || ||||||||||||
Sbjct: 94 tagattcattaacatcactatgaatgtgggaaatgctagaa 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcata 53
|||||||||||||||||||||| |||||| || |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcgcatattcata 55
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||||||||||||||| ||||||||| ||||||||| ||||||| ||
Sbjct: 81 tagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacg 140
Query: 202 gagggagta 210
|||||||||
Sbjct: 141 gagggagta 149
Score = 67.9 bits (34), Expect = 5e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
|||||||||||||||||||||||||||| |||||||||
Sbjct: 81 tagattcattaacatcaatatgaatatgggaaatgcta 118
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
||||||||| ||||||||| |||||||||||||||||
Sbjct: 115 catttcccatattcatattgatgttaatgaatctaga 79
Score = 48.1 bits (24), Expect = 5e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacatt 49
|||||||||||||||| ||||| |||||||||||||
Sbjct: 16 tttcacaatgtaagtc-ttctagcatttcccacatt 50
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 81/92 (88%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt--agtagattcat 71
||||||||| |||||||||||| ||||| ||||||||||||| |||| |||||||||
Sbjct: 16 tttcacaatataagtcattctagcattttccacattcatattgatgttatctagattcat 75
Query: 72 taacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||| || |||||| |||||
Sbjct: 76 taacatcaatatgaatgtgggaaatgttagaa 107
Score = 87.7 bits (44), Expect = 6e-17
Identities = 91/108 (84%), Gaps = 9/108 (8%)
Strand = Plus / Minus
Query: 103 aacatttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatat 162
||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 103 aacatttcccacattcatattgatgttaatgaatctaga---------taacatcaatat 53
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||| || |||||||||||||||||| ||||||| |||||| ||||
Sbjct: 52 gaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||| |||||||||||| ||||||| ||
Sbjct: 67 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacg 126
Query: 202 gagggagtat 211
||||||||||
Sbjct: 127 gagggagtat 136
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 124 tttcacaatataagtcattctaacatttcccacattcatattgatgt 78
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/114 (84%), Gaps = 8/114 (7%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga--------tagatacattaacat 156
||||||| ||||||||||| ||| ||||||||||||| ||||| ||||| |||
Sbjct: 118 catttcctacattcatattgatgctaatgaatctagacatatatctagattcattagcat 59
Query: 157 caatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||| || |||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 58 caatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/114 (84%), Gaps = 8/114 (7%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagata--------gatacattaacat 156
||||||||||||||||||| ||| ||||||||||||||| ||| ||||| |||
Sbjct: 39 catttcccacattcatattgatgctaatgaatctagatatatgtctagattcattagcat 98
Query: 157 caatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||| | ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 99 caatatgaatgtaggaaatgctagaatgacttatattgtgaaacggagggagta 152
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 141 tttcacaatataagtcattctagcatttcctacattcatatt 100
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgggaaatgctagaa 33
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 84 tagattcattagcatcaatatgaatgtaggaaatgctagaa 124
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||||||||||||| | | ||||||||||||||||| ||||||| ||||||||
Sbjct: 96 cattaacatcaatatgaatgcggaatatgctagaatgacttacattgtgaaacggaggga 155
Query: 208 gtat 211
||||
Sbjct: 156 gtat 159
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||||| ||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatataggaaatgctagaa 33
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||| | ||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcctatattcatattgatgt 62
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||| | || |||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcatattccgcattcatattgatgt 101
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 attcattaacatcaatatgaat 87
||||||||||||||||||||||
Sbjct: 93 attcattaacatcaatatgaat 114
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || ||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 79/91 (86%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtag-tagattcatt 72
||||| |||| ||||||||||||||||||||||||| | | | |||| ||||||||||
Sbjct: 123 tttcataatggaagtcattctaacatttcccacatttacagtgatgtttctagattcatt 64
Query: 73 aacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||| || |||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaa 33
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
||||| ||||||||||||| |||||||||||||||||
Sbjct: 39 cattttccacattcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||||||||||||||||| ||||| | ||
Sbjct: 88 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 147
Query: 202 gagggagta 210
|||||||||
Sbjct: 148 gagggagta 156
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 17 cacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 142 cacaatgtaagtcattctagcatttcccacattcatattgatgt 99
Score = 67.9 bits (34), Expect = 5e-11
Identities = 96/119 (80%), Gaps = 12/119 (10%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga------------tagatacatta 152
||||||||||||||||||| ||||||||||||||||| || || |||||
Sbjct: 122 catttcccacattcatattgatgttaatgaatctagacatatatatgtctacattcatta 63
Query: 153 acatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||||| | ||||||||||||||||||| ||||| | |||||| |||||
Sbjct: 62 acatcaatatgaatgtagaaaatgctagaatgacttacattgtggaacggaggaagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 88 tagattcattaacatcaatatgaatgtgggaaatgctagaa 128
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 17 cacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||| ||||| | ||||||||||| ||||
Sbjct: 19 cacaatgtaagtcattctagcattttctacattcatattgatgt 62
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 66 attcattaacatcaatatgaat 87
||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||| ||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||||||||| |||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctaacattttccacattcatatt 106
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||||||| || ||||| ||||||||||||| ||||||| ||
Sbjct: 90 tagattcattaatatcaatatgaatgtggaaaatgttagaatgacttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcata 53
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcata 55
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||| ||||||| || ||||||||||||
Sbjct: 73 tagattcattaacatcactatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| |||||||| ||| |||||||||| ||||||| ||
Sbjct: 79 tagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacg 138
Query: 202 gagggagta 210
|||||||||
Sbjct: 139 gagggagta 147
Score = 73.8 bits (37), Expect = 9e-13
Identities = 92/108 (85%), Gaps = 3/108 (2%)
Strand = Plus / Minus
Query: 106 atttcccacattcatatttatgttaatgaatctagatag-at--acattaacatcaatat 162
||||| |||||||||||| ||||||||||||||||| | || | ||||||||||||||
Sbjct: 112 atttctcacattcatattgatgttaatgaatctagacaacattaatattaacatcaatat 53
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||| ||| |||| ||| |||||||||| ||||||| | |||||||||
Sbjct: 52 aaatgtgacaaatactaaaatgacttacattgtgaaacagagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaat 96
||||||||||||||||||||||||| ||||||||
Sbjct: 79 tagattcattaacatcaatatgaatgtgagaaat 112
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||| || ||||| |||||||||||| ||||
Sbjct: 136 tttcacaatgtaagtcattttagtatttctcacattcatattgatgt 90
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 99/120 (82%), Gaps = 14/120 (11%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata--------------cat 150
||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 124 catttcccacattcatattaatgttaatgaatctagatagatatatatgtctagattcat 65
Query: 151 taacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||| || | ||||||| |||||||||| ||||||| |||||||||||
Sbjct: 64 taacatcaatatgaatgtgggtaatgctataatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||| || |||| |||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattatagcattacccacattcatattgatgt 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||| ||||||||| || ||||||||||||||||||| ||||
Sbjct: 147 tttcacaatataagtcattttagcatttcccacattcatattaatgt 101
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
|||| |||||||||||||| |||||||||||||||||
Sbjct: 39 cattacccacattcatattgatgttaatgaatctaga 75
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
||||||||||||||||||||||||| || | |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggtaatgcta 36
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
||||||||||||||| ||||||||| || |||||||||
Sbjct: 90 tagattcattaacattaatatgaatgtgggaaatgcta 127
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 80/95 (84%), Gaps = 5/95 (5%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtag-----tagatt 68
||||||||| |||||||||||| |||||| ||||||||||| |||| ||||||
Sbjct: 127 tttcacaatataagtcattctactatttcctacattcatattgatgttaatatctagatt 68
Query: 69 cattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||| |||||||||||
Sbjct: 67 cattaacatcaatatgaatatagaaaatgctagaa 33
Score = 67.9 bits (34), Expect = 5e-11
Identities = 81/97 (83%), Gaps = 6/97 (6%)
Strand = Plus / Plus
Query: 115 attcatatttatgttaatgaatctagatagatacattaacatcaatatgaatatgagaaa 174
||||||||| ||||||||||||||||||| ||||||||||||||||| | ||||
Sbjct: 49 attcatattgatgttaatgaatctagata------ttaacatcaatatgaatgtaggaaa 102
Query: 175 tgctagaatgacttacgttgtgaaccggagggagtat 211
| |||||||||||| ||||||| |||||| |||||
Sbjct: 103 tagtagaatgacttatattgtgaaacggaggaagtat 139
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||| | | ||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttctatattcatattgatgt 62
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||| ||
Sbjct: 59 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacg 118
Query: 202 gagggagta 210
|||| ||||
Sbjct: 119 gaggaagta 127
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 59 tagattcattaacatcaatatgaatgtgagaaatgctagaa 99
Score = 63.9 bits (32), Expect = 8e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatag 144
|||||| |||||||||||| ||||||||||||||||||||
Sbjct: 93 catttctcacattcatattgatgttaatgaatctagatag 54
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||| |||||||||||| |||||| |||||||||||| ||||
Sbjct: 116 tttcacaatataagtcattctagcatttctcacattcatattgatgt 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttc 42
|||||||||||||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 87.7 bits (44), Expect = 6e-17
Identities = 79/90 (87%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
|||||||||||||||||||||| ||||| ||| |||||||| ||| || ||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcattttccatattcatatatatatat---attcatta 63
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
||| |||||||||| |||||||||||||||
Sbjct: 62 acagcaatatgaatgtgagaaatgctagaa 33
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||| |
Sbjct: 67 cattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 73.8 bits (37), Expect = 9e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||||||||| ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtat 131
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatatt 57
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 87.7 bits (44), Expect = 6e-17
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgta-gtagattcatt 72
||||||||||||||||||| | ||||| ||||||||||||| ||||| | ||||||||
Sbjct: 16 tttcacaatgtaagtcattttggcattttccacattcatattgatgtatcttgattcatt 75
Query: 73 aacatcaatatgaatatgagaaatgcta 100
||||||||||||||| || |||||||||
Sbjct: 76 aacatcaatatgaatgtgggaaatgcta 103
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||||||||||||| || ||||||||| |||||||||| ||||||| |||||| |
Sbjct: 72 cattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaa 131
Query: 208 gta 210
|||
Sbjct: 132 gta 134
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||| || ||||||||||||||||||| ||||
Sbjct: 123 tttcacaatgtaagtcattttagcatttcccacattcatattgatgt 77
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagata 143
||||||||||||||||||| ||||||||||||| |||||
Sbjct: 100 catttcccacattcatattgatgttaatgaatcaagata 62
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 87.7 bits (44), Expect = 6e-17
Identities = 92/108 (85%), Gaps = 5/108 (4%)
Strand = Plus / Minus
Query: 103 aacatttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatat 162
||||||| ||||||||||||| ||||||||||||||||| | ||| ||||||| ||
Sbjct: 107 aacattttccacattcatattgatgttaatgaatctagacatata-----acatcaacat 53
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||| ||| ||||||||||||||||||| || |||| |||||||||||
Sbjct: 52 aaatgtgaaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| ||| |||||||||||||||||| ||||||||||||| ||||
Sbjct: 128 tttcataatataagtcattctaacattttccacattcatattgatgt 82
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || ||||| |||||||||||| || |||| ||
Sbjct: 71 tagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaacg 130
Query: 202 gagggagta 210
|||| ||||
Sbjct: 131 gaggaagta 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaat 87
|||||||||||||||||||||||||
Sbjct: 71 tagattcattaacatcaatatgaat 95
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata 147
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 catttcccacattcatatttatgttaatgaatctagatagata 81
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||| ||||||||| || ||||||||||||||||||||||||
Sbjct: 16 tttcacaatataagtcattgtagcatttcccacattcatatttatgt 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
||||||||||||||| ||||||||| || |||||||||
Sbjct: 73 tagattcattaacataaatatgaatgtgggaaatgcta 36
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||| ||||||||| ||| ||| |||||||||||
Sbjct: 90 tagattcattatcatcaatataaatgtgaaaaatgctagaa 130
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 80/90 (88%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
|||||||||||||||||||||| |||||||||||||||||| |||| || | ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatcgatgt--ta-actcatta 72
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
||||| |||||||| || ||||||||||||
Sbjct: 73 acatcgatatgaatgtgggaaatgctagaa 102
Score = 81.8 bits (41), Expect = 4e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 150 ttaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagt 209
|||||||| |||||||| || |||||||||||||||||||| ||||||| ||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 210 a 210
|
Sbjct: 5 a 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||| |||||||| || |||||||||||||||||||| ||||||| |||||| |
Sbjct: 68 cattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaa 127
Query: 208 gtat 211
||||
Sbjct: 128 gtat 131
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatat 79
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 80/91 (87%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgta-gtagattcatt 72
||||| |||||||||||||||| ||||| |||||||||||| ||| | ||||||||||
Sbjct: 16 tttcataatgtaagtcattctatcattttccacattcatatatattcatctagattcatt 75
Query: 73 aacatcaatatgaatatgagaaatgctagaa 103
||||| |||||||||||| |||||||||||
Sbjct: 76 aacattaatatgaatatggaaaatgctagaa 106
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||| |||||||||||| ||||||||||| ||||||| ||||||| ||
Sbjct: 66 tagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaacg 125
Query: 202 gagggagta 210
|||| ||||
Sbjct: 126 gaggaagta 134
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||| ||||| ||||| ||| ||||||||| ||||
Sbjct: 123 tttcacaatgtaagtccttctagcattttccatattcatattaatgt 77
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagat 142
||||| ||| ||||||||| ||||||||||||||||||
Sbjct: 100 cattttccatattcatattaatgttaatgaatctagat 63
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||| || ||||| ||||||||||||| || |||| |||||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||||||||| |||||||||||||||| |||||||||| ||||||| ||
Sbjct: 73 tagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacg 14
Query: 202 gagggagtat 211
|||| |||||
Sbjct: 13 gaggaagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 79/93 (84%), Gaps = 6/93 (6%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatg---tag---tagat 67
||||||||| ||||||||| || ||||| ||||||||||||| ||| || |||||
Sbjct: 128 tttcacaatataagtcattttagcattttccacattcatattgatgctatatgtctagat 69
Query: 68 tcattaacatcaatatgaatatgagaaatgcta 100
|||||| ||||||||| ||||||||||||||||
Sbjct: 68 tcattagcatcaatataaatatgagaaatgcta 36
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 154 catcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||||||||||| || |||||||| ||||||||| ||||||| ||||||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagtat 140
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||||||| || |||||| || ||| |||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttctcatatttatatt 57
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| ||||||||||| | |||||||||||||||||| || |||| ||
Sbjct: 90 tagattcattaacatctatatgaatatgggtaatgctagaatgacttacattatgaaacg 149
Query: 202 gagggagtat 211
||||||||||
Sbjct: 150 gagggagtat 159
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 90 tagattcattaacatctatatgaatatgggtaatgctagaa 130
Score = 54.0 bits (27), Expect = 8e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||| ||||| || || | |||||||||||||||||| || |||| |||||| |
Sbjct: 67 cattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaacggaggaa 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| |||||||||||||||| |||| ||||||| |||||
Sbjct: 16 tttcataatgtaagtcattctagcattgcccacatacatat 56
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| |||||||||||||||| |||| |||| ||||||||
Sbjct: 147 tttcataatgtaagtcattctagcattacccatattcatat 107
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| || ||||||| |||| ||||||||||||||||||||||||||| || |||| ||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 202 gagggagtat 211
||||||||||
Sbjct: 13 gagggagtat 4
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||| ||||||| |||| |||||||||||||||||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaa 33
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 9e-16
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctaacatttcccacattcatatt 57
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||||||| || |||||| ||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaatatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||||||| ||| |||| |||||||||||||| ||||||| ||
Sbjct: 90 tagattcattaaaatcaatatgaatgtgaaaaatactagaatgacttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| |||| ||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagtatttttcacattcatatt 106
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||| |||||||||||| || |||||| |||||
Sbjct: 73 tagattcattaatatcaatatgaatgtgggaaatgttagaa 33
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||| |||||||||||| ||| |||| ||||||
Sbjct: 90 tagattcattaaaatcaatatgaatgtgaaaaatactagaa 130
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||||||||||||| ||||||||||||||||||||||| ||| ||| ||
Sbjct: 73 tagattcattaccatcaatatgaatgtgagaaatgctagaatgacttacattgcgaaacg 14
Query: 202 gagggagtat 211
|||| |||||
Sbjct: 13 gaggaagtat 4
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||| ||||| |||||| |||||| ||||||||||||| ||||||| ||
Sbjct: 89 tagattcattaacattaatataaatatgggaaatgttagaatgacttacattgtgaaacg 148
Query: 202 gagggagta 210
|||||||||
Sbjct: 149 gagggagta 157
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||||||||||||| ||| ||||| ||||
Sbjct: 146 tttcacaatgtaagtcattctaacatttcccatatttatattaatgt 100
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 73 tagattcattaccatcaatatgaatgtgagaaatgctagaa 33
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 16 tttcgcaatgtaagtcattctagcatttctcacattcatatt 57
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||| ||||| |||||| |||||| |||||
Sbjct: 89 tagattcattaacattaatataaatatgggaaatgttagaa 129
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 83.8 bits (42), Expect = 9e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 154 catcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||||||||||| |||||||| |||||||||||||| ||||||| ||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagtatttctcacattcatatt 57
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||| ||||||||||||| |||||||| |||||| |||||
Sbjct: 132 tttcataatgtaagtcattttaacatttttcacatttatatt 91
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||| |||||| |||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 90 tagattcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 149
Query: 202 gagggagtat 211
||||||||||
Sbjct: 150 gagggagtat 159
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||| ||||||||| || |||||||||| |||||| ||
Sbjct: 73 tagattcattaacatctatatgaatgtgagaaatgataaaatgacttacaatgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatat 107
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatg 97
|||||||||||||||| |||||||| |||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgagaaatg 39
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||||| ||||||||||| || |||||| |||||||||||
Sbjct: 16 tttcacattgtaagtcattttatcatttctcacattcatat 56
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||| |||||| |||||||| || ||||||||||||
Sbjct: 90 tagattcatcaacatctatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 83.8 bits (42), Expect = 9e-16
Identities = 80/90 (88%), Gaps = 2/90 (2%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
|||||||||||||||||||||| ||||| ||| ||||||||| |||| |||||||| ||
Sbjct: 120 tttcacaatgtaagtcattctagcattttccatattcatattgatgt-ttagattca-ta 63
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
|||||||||||||| || |||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaa 33
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 152 aacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 73.8 bits (37), Expect = 9e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 151 taacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||| || |||||||||||| |||||| ||||||| |||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Query: 211 t 211
|
Sbjct: 4 t 4
Score = 67.9 bits (34), Expect = 5e-11
Identities = 78/90 (86%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
||||||||||||||| |||||| ||||| ||||||||||||| |||| | || || | |
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatattgatgttat-gaatc-taa 73
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||| |||||||||||
Sbjct: 74 acatcaatatgaatatggaaaatgctagaa 103
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 83.8 bits (42), Expect = 9e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 153 acatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgta 61
|||||||||||||||||||||| |||||| |||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgta 63
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
|||||||||||||| |||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaa 33
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 174 atgctagaatgacttacgttgtgaaccggagggagta 210
|||||||| |||||||| ||||||| |||||||||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagta 111
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||| |||||||||| || ||||| |||||||||||||| ||||||| ||
Sbjct: 90 tagattcattaacaacaatatgaatgtgggaaatactagaatgacttacattgtgaaacg 149
Query: 202 gagggagtat 211
||||||||||
Sbjct: 150 gagggagtat 159
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||||||||| || || ||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagtatttcccacattcatatt 106
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||| |||||| |||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacatccatattgatgt 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||| || || |||||||||||
Sbjct: 73 tagattcattaacatcaatatggatgtggaaaatgctagaa 33
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||| |||||||||| || ||||| ||||||
Sbjct: 90 tagattcattaacaacaatatgaatgtgggaaatactagaa 130
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||||||||||||||||||| || |||| ||
Sbjct: 61 tagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacg 120
Query: 202 gagggagta 210
|||| ||||
Sbjct: 121 gaggaagta 129
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| |||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 118 tttcataatgtaagtcattctagcatttcccacattcatattgatgt 72
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
||||||||||||||||||| ||||||||| |||||||
Sbjct: 95 catttcccacattcatattgatgttaatggatctaga 59
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 61 tagatccattaacatcaatatgaatgtgggaaatgctagaa 101
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||||||| || ||||||||||||||||||| ||||||| ||
Sbjct: 90 tagattcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 147 tttcacaatataagtcattctagcatttcccacattcatatt 106
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||| |||||||||||||| ||| ||||||||||||| ||||
Sbjct: 16 tttcacaatataagtcattctaactttttccacattcatattaatgt 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagata 143
||||||||||||||||||| || ||||||||||||||||
Sbjct: 124 catttcccacattcatattgatattaatgaatctagata 86
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||| |||||||||||| || ||||||||||||
Sbjct: 90 tagattcattaatatcaatatgaatgtgggaaatgctagaa 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||| ||||||||| || ||| | |||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacattaatatgaatgtggaaaaagttagaatgacttatattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| | |||||||||||||||||||| || |||| ||
Sbjct: 55 tagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacg 114
Query: 202 gagggagta 210
|||||||||
Sbjct: 115 gagggagta 123
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagata 143
||||||| ||||||||||| |||||||||||||||||||
Sbjct: 89 catttcctacattcatattgatgttaatgaatctagata 51
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| |||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 112 tttcataatgtaagtcattctagcatttcctacattcatattgatgt 66
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| | ||||||||||||
Sbjct: 55 tagattcattaacatcaatatgaatgtaggaaatgctagaa 95
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 172 aaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacattt 41
|||||||||||||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||| | ||||||| ||| ||||||||||||||||||| ||||||| ||
Sbjct: 88 tagattcattaacatgagtatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 147
Query: 202 gagggagta 210
|||||||||
Sbjct: 148 gagggagta 156
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||| | ||||||| || ||||||| ||||||||||| ||||||| |||||| |
Sbjct: 67 cattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtgaaacggaggaa 8
Query: 208 gtat 211
||||
Sbjct: 7 gtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcata 53
||||||||| ||||||||||| |||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctggcatttcccacattcata 55
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcata 53
|||||||||||||||||||||| ||||| ||||||||||
Sbjct: 145 tttcacaatgtaagtcattctagcatttttcacattcata 106
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||| | ||||||| ||| |||||||||||
Sbjct: 88 tagattcattaacatgagtatgaatgtgaaaaatgctagaa 128
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 112 cacattcatatttatgttaatgaatctagata 143
|||||||||| | |||||||||||||||||||
Sbjct: 115 cacattcatactcatgttaatgaatctagata 84
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||||||| || |||||||||||||||||||| |||||| ||
Sbjct: 90 tagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattgtgatacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 16 tcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||| |||||||||||||||||||
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatatt 106
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata 147
||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 124 catttcccacattcatattgatattaatgaatctagatagata 82
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||| ||| || ||||||| | |||||||||| ||||||| ||
Sbjct: 73 tagattcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||| |||||||||||| || ||||||||||||
Sbjct: 90 tagattcattaatatcaatatgaatgtgggaaatgctagaa 130
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||| | ||||||||||||| ||||| ||||
Sbjct: 16 tttcacaatgtaagtcatttttgcatttcccacatttatattgatgt 62
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgc 98
||||||||||||||||||||| ||| || |||||||
Sbjct: 73 tagattcattaacatcaatataaatgtgggaaatgc 38
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||||||| || |||||| ||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctatcatttcccacattcatatt 57
Score = 73.8 bits (37), Expect = 9e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||| ||||||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 107 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtat 159
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||| |||||| |||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcatat 107
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||| |||||||||||| || |||||| |||||
Sbjct: 73 tagattcattaatatcaatatgaatgtgggaaatgatagaa 33
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||||||||| || |||||||||||| |||||||||| ||||||| ||
Sbjct: 90 tagattcattagcatcaatatggatgtgagaaatgctaaaatgacttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttat 58
|||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatacttat 60
Score = 67.9 bits (34), Expect = 5e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| || | ||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaatataagtatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagtat 211
|||| |||||
Sbjct: 13 gaggaagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
||||||||||| |||||||||| || ||||||||||||
Sbjct: 90 tagattcattagcatcaatatggatgtgagaaatgcta 127
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||||||| || |||||| ||||| ||||||
Sbjct: 147 tttcacaatgtaagtcattttagcatttctcacatccatatt 106
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||| ||||||||||| || |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata 147
||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 39 catttcccacattcatattgacgttaatgaatctagatagata 81
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 73 tagattcattaacgtcaatatgaatgtgggaaatgctagaa 33
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||||||||| ||| || ||||| ||| ||||||||| ||||||| ||
Sbjct: 90 tagattcattaccatcaatattaatgtgggaaattctaaaatgacttagattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| ||||||||| || |||||||||||| |||||
Sbjct: 147 tttcacaatctaagtcattttagaatttcccacattaatatt 106
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||||||||||||||||||||||| |||||||||||| ||||| | ||
Sbjct: 90 tagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtggaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 90 tagattcattagcatcaatatgaatatgagaaatgttagaa 130
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 17 cacaatgtaagtcattctaacatttcccacattcatatt 55
|||||| ||||||||||||||||||| || |||||||||
Sbjct: 144 cacaatataagtcattctaacatttctcatattcatatt 106
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgactta 189
||||| |||||||||||||||| |||| |||||||||||||
Sbjct: 67 cattagcatcaatatgaatatggaaaatactagaatgactta 26
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||| |||||||||||||||| |||| ||||||
Sbjct: 70 attcattagcatcaatatgaatatggaaaatactagaa 33
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||||||||||||||| ||||| |||||||||||||| || |||| ||
Sbjct: 68 tagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaacg 127
Query: 202 gagggagta 210
|||||||||
Sbjct: 128 gagggagta 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 81/93 (87%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatg-tagt--agattca 70
||||||||||||||| |||||| ||||| || ||||||||| ||| |||| |||||||
Sbjct: 16 tttcacaatgtaagtaattctagtatttctcatattcatattgatgctagtctagattca 75
Query: 71 ttaacatcaatatgaatatgagaaatgctagaa 103
||| |||||||||||||||| ||||| ||||||
Sbjct: 76 ttagcatcaatatgaatatgggaaatactagaa 108
Score = 73.8 bits (37), Expect = 9e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 154 catcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||||||||| ||||||| |||||| ||||||| |||||| ||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||| |||||||||||||||| |||||||| |||||||||
Sbjct: 125 tttcataatgtaagtcattctagtatttcccatattcatatt 84
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 75 catcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||| ||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaa 33
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||| |||||| ||| || |||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||||||| ||| |||||||||||||||||| ||||| | ||
Sbjct: 90 tagattcattaatatcaatatgaatgtgaaaaatgctagaatgacttatattgtggaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatatt 57
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||| |||||||||||| ||| |||||||||||
Sbjct: 90 tagattcattaatatcaatatgaatgtgaaaaatgctagaa 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||| |||||| ||| || ||||||||||||
Sbjct: 73 tagattcattaacaccaatataaatgtgggaaatgctagaa 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 17 cacaatgtaagtcattctaacatttcccacattcatatt 55
|||||| |||||||||||| ||||| ||||||||||||
Sbjct: 144 cacaatataagtcattctagcatttttcacattcatatt 106
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||| |
Sbjct: 67 cattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggaggaa 8
Query: 208 gtat 211
||||
Sbjct: 7 gtat 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||||||||| ||| ||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctaacattttccatattcatattgatgt 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 89/108 (82%), Gaps = 8/108 (7%)
Strand = Plus / Plus
Query: 103 aacatttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatat 162
||||||| ||| ||||||||| |||||||||||| ||||||| |||||||||
Sbjct: 37 aacattttccatattcatattgatgttaatgaatgtagatagt--------catcaatat 88
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||| |||| ||| |||||||||| || |||| |||||||||||
Sbjct: 89 gaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| ||||| |||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaa 33
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 79.8 bits (40), Expect = 1e-14
Identities = 96/114 (84%), Gaps = 8/114 (7%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacat-----ta---acat 156
||||| |||||||||||| |||||||||| | ||||||||||||| || ||||
Sbjct: 39 cattttccacattcatatcgatgttaatgagtttagatagatacatatgtctagatacat 98
Query: 157 caatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 99 caatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 152
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||| |||||||| || ||||||||||||||||||| ||||||| ||||||||
Sbjct: 67 cattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggga 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatat 56
Score = 63.9 bits (32), Expect = 8e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgta 61
|||||||||||||||||||||| ||||| ||| ||||||||| |||||
Sbjct: 141 tttcacaatgtaagtcattctagcattttccatattcatattgatgta 94
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||| |||||||||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaa 124
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 78/90 (86%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtag---tagattca 70
||||||||||||||| |||||| |||||||||||||| |||||| | |||||| |
Sbjct: 16 tttcacaatgtaagttattctagtatttcccacattcacatttataaatgtctagattta 75
Query: 71 ttaacatcaatatgaatatgagaaatgcta 100
|||||||||||||||||||| |||||||||
Sbjct: 76 ttaacatcaatatgaatatgggaaatgcta 105
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 149 attaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggag 208
||||||||||||||||||||| ||||||||| |||||||| | ||||||| |||||| ||
Sbjct: 75 attaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacggaggaag 134
Query: 209 tat 211
|||
Sbjct: 135 tat 137
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 77.8 bits (39), Expect = 6e-14
Identities = 89/106 (83%), Gaps = 6/106 (5%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||| ||||||||||| | ||| |||||||||||||||| | ||||||||||||
Sbjct: 39 cattttccacattcatactgatgctaatgaatctagatag------tgacatcaatatga 92
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || ||||||||| |||||||||| || |||| |||||||||||
Sbjct: 93 atgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| ||||||||||||| || ||||||||||||||||||| ||||
Sbjct: 127 tttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcata 53
||||| ||| |||||||||||| ||||| |||||||||||
Sbjct: 16 tttcataatataagtcattctagcattttccacattcata 55
Score = 48.1 bits (24), Expect = 5e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgactta 189
||||| ||||| ||||| ||||||| || ||||||||||||||||||
Sbjct: 73 tagattcattagcatcagtatgaatgtggaaaatgctagaatgactta 26
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||||||||||||| | |||||||||||||||||||| ||||||| |||||| |
Sbjct: 52 cattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaa 111
Query: 208 gta 210
|||
Sbjct: 112 gta 114
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcat 52
|||||||||||||||||||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 103 tttcacaatgtaagtcattctagcatttcctacattcatattgatgt 57
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 161 atgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||| || |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||||||| | ||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaa 86
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaat 136
||||||| ||||||||||| ||||||||||||
Sbjct: 80 catttcctacattcatattgatgttaatgaat 49
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgactt 188
||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 47 tagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgactt 188
||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 77 tagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata 147
||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 111 catttcccacattcatattgatgttaatgtatctagatagata 69
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagat 142
||||||||||||||||||| ||||||||| ||||||||
Sbjct: 13 catttcccacattcatattgatgttaatgtatctagat 50
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 47 tagatacattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 77 tagatacattaacatcaatatgaatgtgggaaatgctagaa 117
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 25 aagtcattctaacatttcccacattcatatttatgt 60
||||||||||| ||||||||||||||||||| ||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgt 36
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 25 aagtcattctaacatttcccacattcatatttatgt 60
||||||||||| ||||||||||||||||||| ||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgt 88
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgactt 188
||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 47 tagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 47 tagattcattaacatcaatatgaatgtgagaaatgctagaa 7
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata 147
|||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 13 catttctcacattcatattgatgttaatgaatctagatagata 55
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgactt 188
||||| ||||||||||||||||||| || ||||||||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaa 104
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 25 aagtcattctaacatttcccacattcatatttatgt 60
||||||||||| ||||||||||||||||||| ||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgt 75
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 25 aagtcattctaacatttcccacattcatatttatgt 60
||||||||||| |||||| |||||||||||| ||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgt 36
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||||||||||||| || ||| ||||||||||||||| ||||||| ||||||||
Sbjct: 90 cattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggga 149
Query: 208 gta 210
|||
Sbjct: 150 gta 152
Score = 75.8 bits (38), Expect = 2e-13
Identities = 91/108 (84%), Gaps = 8/108 (7%)
Strand = Plus / Minus
Query: 111 ccacattcatatttatgttaatgaatctagatagatacat-----ta---acatcaatat 162
||||||||||||| |||||||||| | ||||||||||||| || ||||||||||
Sbjct: 112 ccacattcatattgatgttaatgagtttagatagatacatatgtctagatacatcaatat 53
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||| || ||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 52 gaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgta 61
|||||||||||||||||||||| ||||| ||||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgta 63
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| | ||| ||||||||||||| ||||
Sbjct: 141 tttcacaatgtaagtcattctagccttttccacattcatattgatgt 95
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||||||||||||| || |||||||| |||||||||| ||||||| ||||||||
Sbjct: 67 cattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggga 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||| || ||||| ||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattttagcattttccacattcatattgatgt 62
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 151 taacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||| || |||||||| ||| | |||| ||||||| |||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Score = 52.0 bits (26), Expect = 3e-06
Identities = 73/87 (83%), Gaps = 5/87 (5%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
||||||||||||| | ||| || ||||| ||||||||||||| |||| || ||||||
Sbjct: 117 tttcacaatgtaatttattttagcattttccacattcatattgatgt--ta---tcatta 63
Query: 74 acatcaatatgaatatgagaaatgcta 100
|||||||||||||| || ||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgcta 36
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatga 134
||||| ||||||||||||| ||||||||||
Sbjct: 39 cattttccacattcatattgatgttaatga 68
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||||||||||||| || |||||||||||||||||| | ||||||| |||||| |
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggaggaa 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||| ||||||||||| ||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgcaagtcattctagcatttcccacattcatattgatgt 62
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 67 ttcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||| || ||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaa 135
||||||||||||||||||| |||||||||||
Sbjct: 39 catttcccacattcatattgatgttaatgaa 69
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||| ||||| ||| ||||||||||||||||||||||| ||||||| |||||| |
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| |||||| |||||| ||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacatttatattaatgt 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 69 cattaacatcaatatgaatatgagaaatgctagaa 103
||||||||| ||||| ||| |||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaa 33
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 173 aatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||||| ||||| | |||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagta 101
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 78/90 (86%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
||||| |||||||||||||||| |||| || | |||||||| ||||| |||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattacctatattcatatatatgtc-tagattcatta 74
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
||||| |||||||| || | ||||||||||
Sbjct: 75 acatctatatgaatgtgtgcaatgctagaa 104
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||| || | |||||||||||||||||| || |||| |
Sbjct: 64 tagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaatg 123
Query: 202 gagggagtat 211
|||| |||||
Sbjct: 124 gaggaagtat 133
Score = 58.0 bits (29), Expect = 5e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||| | |||||||||||||||||| || |||| ||||||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 11 ccatttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||| |||||||||||||||| |||| | |||||||||||
Sbjct: 124 ccatttcataatgtaagtcattctagcattgcacacattcatat 81
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 112 cacattcatatttatgttaatgaatctaga 141
||||||||||| |||||||||||||||||
Sbjct: 91 cacattcatatagatgttaatgaatctaga 62
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||||||| || ||||| |||||||| ||||| ||||||| ||
Sbjct: 90 tagattcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacg 149
Query: 202 gagggagtat 211
||||||||||
Sbjct: 150 gagggagtat 159
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 147 tttcacaatgtaagacattctagtatttcccacattcatatt 106
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 106 atttcccacattcatatttatgttaatgaatctaga 141
|||||||||||||||||| || ||||||||||||||
Sbjct: 123 atttcccacattcatattgatattaatgaatctaga 88
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 172 aaatgctagaatgacttacgttgtgaaccggagggagta 210
|||| |||||||||||||| ||||||| |||||||||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||| |||||||||||| || ||||| ||||||
Sbjct: 90 tagattcattaatatcaatatgaatgtgggaaatactagaa 130
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattcta 35
||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||| ||||||||||||| ||||||| ||
Sbjct: 89 tagattcattaacatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacg 148
Query: 202 gagggagtat 211
||||||||||
Sbjct: 149 gagggagtat 158
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||||||| |||| ||||||||||||| ||||
Sbjct: 146 tttcacaatgtaagtcattctaatattttccacattcatattgatgt 100
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 106 atttcccacattcatatttatgttaatgaatctaga 141
|||| ||||||||||||| |||||||||||||||||
Sbjct: 122 attttccacattcatattgatgttaatgaatctaga 87
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||||||| || |||| ||||||| |||||| |||| || ||
Sbjct: 72 tagattcattaatatcaatatgaatgtgggaaaa-ctagaataacttacattgtaaaacg 14
Query: 202 gagggagtat 211
||||||||||
Sbjct: 13 gagggagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaat 87
|||||||||||||||||||||||||
Sbjct: 89 tagattcattaacatcaatatgaat 113
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||||||||||| ||| ||||| ||||||||||||| ||||||| ||
Sbjct: 63 tagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacg 122
Query: 202 gagggagtat 211
||||||||||
Sbjct: 123 gagggagtat 132
Score = 58.0 bits (29), Expect = 5e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||| ||||||||| |||||||||||| ||||||| ||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggaggga 8
Score = 52.0 bits (26), Expect = 3e-06
Identities = 76/90 (84%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
||||||||| |||||||||||| |||||| || ||||||| | || | |||||||||||
Sbjct: 16 tttcacaatataagtcattctatcatttctcaaattcata-tgat-aactagattcatta 73
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
|||||||||||| ||| ||||| |||||
Sbjct: 74 gcatcaatatgaacgtgaaaaatgatagaa 103
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 120 tttcacaatgtaagtcattctatcatttttcacgttcatatt 79
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatatt 78
Score = 67.9 bits (34), Expect = 5e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 158 aatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||||||| || |||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 131
Score = 63.9 bits (32), Expect = 8e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||| |||||||||||||||| |||||| ||||||| |||||| ||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 77/90 (85%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
||||||||||||||| |||||| |||||| |||||||||| ||||| |||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcatttctcacattcata--tatgt-ctagattcatta 72
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
| ||||||||| || ||||||||||||
Sbjct: 73 gtactaatatgaatgtgggaaatgctagaa 102
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 149 attaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggag 208
||||| |||||||| ||| || |||||||||||||||||||| ||||||| |||||||||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 209 ta 210
||
Sbjct: 6 ta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatatt 57
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatatt 84
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 155 atcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||| || ||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||||||| || |||||||||||||||||||| || |||| ||
Sbjct: 47 tagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacg 106
Query: 202 gagggagtat 211
|||| |||||
Sbjct: 107 gaggaagtat 116
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 104 tttcataatgtaagtcattctagcatttcccacattcatatt 63
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagata 143
||||||||||||||||||| || ||||||||||||||||
Sbjct: 81 catttcccacattcatattgatattaatgaatctagata 43
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 174 atgctagaatgacttacgttgtgaaccggagggagta 210
||||||||||||||||| ||||||| |||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||| |||||||||||| || ||||||||||||
Sbjct: 47 tagattcattaatatcaatatgaatgtgggaaatgctagaa 87
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattcta 35
||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 75.8 bits (38), Expect = 2e-13
Identities = 93/112 (83%), Gaps = 7/112 (6%)
Strand = Plus / Plus
Query: 106 atttcccacattcatatttatgttaatgaatctagat-------agatacattaacatca 158
|||||||||||||||||| ||||||||||| ||| || || | |||||||||||
Sbjct: 40 atttcccacattcatattgatgttaatgaaactacatctatttaagtttcattaacatca 99
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||| ||| || ||||| |||||||||||||| ||||||| |||||| ||||
Sbjct: 100 atataaatgtgggaaatactagaatgacttacattgtgaaacggaggaagta 151
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||||||||||||| || ||||| |||||||||||| ||||||| ||||||||
Sbjct: 67 cattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggga 8
Query: 208 gtat 211
||||
Sbjct: 7 gtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 16 tttcacaatataagtcattctattatttcccacattcatattgatgt 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| |||||||||||| ||||| ||||
Sbjct: 140 tttcacaatgtaagtcattctagtatttcccacatttatattgatgt 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 62 gtagattcattaacatcaatatgaatatgagaaat 96
|||| ||||||||||||||||||||| || |||||
Sbjct: 74 gtagtttcattaacatcaatatgaatgtgggaaat 40
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| |||||||| ||||||||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 202 gaggga 207
||||||
Sbjct: 13 gaggga 8
Score = 65.9 bits (33), Expect = 2e-10
Identities = 79/94 (84%), Gaps = 4/94 (4%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgta----gtagattc 69
||||||||| ||||||||| || ||||| ||||||||| || |||| ||||||||
Sbjct: 126 tttcacaatataagtcattttagcatttttcacattcatgttgatgttatatgtagattc 67
Query: 70 attaacatcaatatgaatatgagaaatgctagaa 103
||||| |||||||| ||||||||||||||||||
Sbjct: 66 attaatatcaatatctatatgagaaatgctagaa 33
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||||||||| |||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctaacatttaccacattcatatt 106
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||||||||||| |||||||||||||||||||||| ||||||| ||
Sbjct: 73 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||||||||||||| || ||||| ||||||||||||| ||||||| ||
Sbjct: 90 tagattcattagcatcaatatgaatgtggtaaatgttagaatgacttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttctcacattcatatt 57
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||| |||||||||||| |||||||||||||||
Sbjct: 73 tagattcattagtatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 73.8 bits (37), Expect = 9e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 154 catcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||| || |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacgttcatatt 57
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||||||||| |||| |||| || |||||||||||
Sbjct: 68 gaaatgctagaatgatttacattgtaaaacggagggagta 107
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 18 acaatgtaagtcattctaacatttcccaca 47
||||||||| |||||||| |||||||||||
Sbjct: 92 acaatgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||||||||||||||| |||||||||||||||||| ||||||| ||
Sbjct: 90 tagattcattagcatcaatatgaatatagaaaatgctagaatgacttatattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||||||| |||| || ||||||||||||||||||| ||||||| |||||| |
Sbjct: 67 cattaacatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 208 gtat 211
||||
Sbjct: 7 gtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||| |||||||| |||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcgtattgatgt 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 90 tagattcattagcatcaatatgaatatagaaaatgctagaa 130
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| ||||| | | |||||||||
Sbjct: 147 tttcacaatataagtcattctagcattttctatattcatatt 106
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||||| | |||||||||||||||||| || |||| ||
Sbjct: 90 tagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||| |||| | |||||||||||||||| || |||| ||
Sbjct: 73 tagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||| |||||||| |||| | ||||||||
Sbjct: 73 tagattcattaacatccatatgaatgtgagcattgctagaa 33
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||| |||||||||| | ||||||||||
Sbjct: 90 tagattcattaacatctatatgaatataggcaatgctagaa 130
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||| | |||||||| || ||||||||||||||||||| ||||||| ||
Sbjct: 90 tagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 20 aatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||||||||||||||||
Sbjct: 22 aatgtaagtcattctaacatttcccacattcatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcatat 107
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttac 190
||||| |||||||| | |||||||| || |||||| |||||||||||||
Sbjct: 73 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttac 25
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 73.8 bits (37), Expect = 9e-13
Identities = 72/84 (85%), Gaps = 6/84 (7%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||| ||||||||| ||| ||||| |||||||||||
Sbjct: 78 catttcccacattcatattgatgctaatgaatc------gattcattagcatcaatatga 25
Query: 165 atatgagaaatgctagaatgactt 188
|| || ||||||||||||||||||
Sbjct: 24 atgtgggaaatgctagaatgactt 1
Score = 67.9 bits (34), Expect = 5e-11
Identities = 69/81 (85%), Gaps = 6/81 (7%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
||||||||||||||||||| ||| ||||||||| ||| ||||| |||||||||||
Sbjct: 13 catttcccacattcatattgatgctaatgaatc------gattcattagcatcaatatga 66
Query: 165 atatgagaaatgctagaatga 185
|| || |||||||||||||||
Sbjct: 67 atgtgggaaatgctagaatga 87
Score = 63.9 bits (32), Expect = 8e-10
Identities = 71/84 (84%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 25 aagtcattctaacatttcccacattcatatttatg-----tagtagattcattaacatca 79
||||||||||| ||||||||||||||||||| ||| | | ||||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatcgattcattagcatca 60
Query: 80 atatgaatatgagaaatgctagaa 103
|||||||| || ||||||||||||
Sbjct: 61 atatgaatgtgggaaatgctagaa 84
Score = 58.0 bits (29), Expect = 5e-08
Identities = 68/81 (83%), Gaps = 5/81 (6%)
Strand = Plus / Minus
Query: 28 tcattctaacatttcccacattcatatttatgt-----agtagattcattaacatcaata 82
|||||||| ||||||||||||||||||| ||| | | ||||||||| ||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatcgattcattagcatcaata 28
Query: 83 tgaatatgagaaatgctagaa 103
||||| || ||||||||||||
Sbjct: 27 tgaatgtgggaaatgctagaa 7
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||||||||| |||||||||||| ||||||||||||| ||||||| ||
Sbjct: 73 tagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||| ||||||||| |||||||||||| ||||||
Sbjct: 73 tagattcattatcatcaatataaatatgagaaatactagaa 33
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||| ||||||||| |||||||||| || |||| |||||||||||
Sbjct: 83 atatgtgaaatgctacaatgacttacattatgaaacggagggagta 128
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 106 atttcccacattcatatttatgttaatgaatctagatagata 147
||||| || ||| ||||| ||| |||||||||||||||||||
Sbjct: 40 atttctcatatttatattgatgataatgaatctagatagata 81
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||||| | |||||||||||||||||| || |||| ||
Sbjct: 73 tagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||| |||| | |||||||||||||||| || |||| ||
Sbjct: 90 tagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacg 149
Query: 202 gagggagta 210
|||| ||||
Sbjct: 150 gaggaagta 158
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||| |||||||||| | ||||||||||
Sbjct: 73 tagattcattaacatctatatgaatataggcaatgctagaa 33
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||| |||||||| |||| | ||||||||
Sbjct: 90 tagattcattaacatccatatgaatgtgagcattgctagaa 130
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 73.8 bits (37), Expect = 9e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 155 atcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||| || ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtat 4
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcatatt 57
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatatt 63
Score = 54.0 bits (27), Expect = 8e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 156 tcaatatgaatatgagaaatgctagaatgacttacgttgtgaa 198
||||||||||| || ||||||||||||||||||| |||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaa 103
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||| ||||||||| || |||||||||||||||||| ||||||| ||
Sbjct: 90 tagattcattaacattaatatgaatgtggagaatgctagaatgacttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||||||| || |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| |||| ||||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcattctccacattcatattaatgt 101
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 111 ccacattcatatttatgttaatgaatctaga 141
||||||||||||| |||||||||||||||||
Sbjct: 118 ccacattcatattaatgttaatgaatctaga 88
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
|||||||||||||| ||||||||| || |||||||||
Sbjct: 73 tagattcattaacactaatatgaatgtgggaaatgcta 36
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||| ||| || ||||||||| |||||||||| ||||||| ||
Sbjct: 90 tagattcattaacatcaatataaatgtgggaaatgctaaaatgacttactttgtgaaacg 149
Query: 202 gagggagta 210
|||| ||||
Sbjct: 150 gaggaagta 158
Score = 67.9 bits (34), Expect = 5e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||| ||||||||||| ||| || ||||||| | |||||||||| ||||||| ||
Sbjct: 73 tagattcataaacatcaatataaatgtgggaaatgcaaaaatgacttactttgtgaaacg 14
Query: 202 gagggagtat 211
||||||||||
Sbjct: 13 gagggagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagataga 145
||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 124 catttcccacatttatattgatgttaatgaatctagataga 84
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||| |||||||||| || ||||||||||||| ||||| ||||
Sbjct: 147 tttcacaaagtaagtcattttagcatttcccacatttatattgatgt 101
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
||||||||||||||||||||| ||| || |||||||||
Sbjct: 90 tagattcattaacatcaatataaatgtgggaaatgcta 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||| |||||||||| | ||||||||||||| ||||| ||||
Sbjct: 16 tttcacaaagtaagtcatttttgcatttcccacatttatattgatgt 62
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| ||||||||||||| |||||||||| | ||||| || |||| ||
Sbjct: 90 tagattcattaacatctatatgaatatgagcaatgctagaaagtcttacattatgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgaatatgagcaatgctagaaa 131
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | ||| |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatactagaaa 32
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||| |||| |||||||| || ||||||||||||||||||| ||||||| ||||||||
Sbjct: 96 cattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggga 155
Query: 208 gtat 211
||||
Sbjct: 156 gtat 159
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 141 atagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaacc 200
|||||| ||||| |||| |||||||||| ||||| ||||||||||||| ||||||| |
Sbjct: 74 atagattcattagcatctatatgaatatagaaaatgttagaatgacttacattgtgaaac 15
Query: 201 ggagggagtat 211
|||||||||||
Sbjct: 14 ggagggagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcatat 107
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||||||||| | | ||||||||
Sbjct: 16 tttcacaatgtaagtcattctaacattttctatattcatat 56
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 76/90 (84%), Gaps = 7/90 (7%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
|||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacgttcatatatat-------attcatta 68
Query: 74 acatcaatatgaatatgagaaatgctagaa 103
| |||||||||||| | ||||||||||||
Sbjct: 69 atatcaatatgaatgttggaaatgctagaa 98
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||| |||||||||||| | |||||||||||||||||||| ||||||| |||||| |
Sbjct: 64 cattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaa 123
Query: 208 gta 210
|||
Sbjct: 124 gta 126
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 115 tttcacaatgtaagtcattctagcatttccaacattcatatt 74
Score = 63.9 bits (32), Expect = 8e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||||||| ||||||| |||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 135 atctagatagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttg 194
||||| |||||| ||||||||||||||| | | || |||||||||||| |||||| |||
Sbjct: 80 atctatatagattcattaacatcaatataattgtggaaaatgctagaataacttacattg 21
Query: 195 tgaaccggagggagta 210
|||| |||||||||||
Sbjct: 20 tgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||| |||||| ||||| ||||| | ||||| ||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacaattatattgatgt 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata 147
||||| ||||| | ||||| ||||||||||||||| |||||||
Sbjct: 39 cattttccacaattatattgatgttaatgaatctatatagata 81
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 135 atctagatagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttg 194
||||| |||||| || |||| || |||||||||| |||||||||||||||||||| ||
Sbjct: 80 atctatatagattcactaacctctatatgaatataggaaatgctagaatgacttacatta 21
Query: 195 tgaaccggagggagta 210
|||| |||||||||||
Sbjct: 20 tgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 147 tttcataatgtaagtcattctagcatttcccacattcatat 107
Score = 63.9 bits (32), Expect = 8e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| || |||| || |||||||| || |||||||||||||||||||| || |||| ||
Sbjct: 90 tagattcactaacctccatatgaatgtgggaaatgctagaatgacttacattatgaaacg 149
Query: 202 gagggagt 209
||||||||
Sbjct: 150 gagggagt 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| |||||||||||||||| ||||||| | ||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttcctatattcatat 56
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 135 atctagatagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttg 194
||||| |||||| |||||||||||||| | | || ||||||||||||||||||| |||
Sbjct: 64 atctatatagatttattaacatcaatataattgtggaaaatgctagaatgacttacattg 123
Query: 195 tgaaccggagggagta 210
|||| |||||||||||
Sbjct: 124 tgaaacggagggagta 139
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||||||||||||||||||| ||||| ||||| | ||||| ||||
Sbjct: 128 tttcacaatgtaagtcattctagcattttccacaattatattgatgt 82
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 ccatttcacaatgtaagtcattctaacattt 41
|||||||||||||||||||||| || |||||
Sbjct: 13 ccatttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcata 53
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 84 tttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 160 tatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||| || |||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 170 agaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||||||||||||||| ||||||| | |||||||||
Sbjct: 45 agaaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttc 42
|||||||||||||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||||| ||| ||| || ||||||||||||||||||| ||||||| ||||||||
Sbjct: 59 cattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggaggga 118
Query: 208 gtat 211
||||
Sbjct: 119 gtat 122
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatattt 56
||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattt 58
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacatt 49
||||||||| |||||||||||| |||||||||||||
Sbjct: 110 tttcacaatctaagtcattctagcatttcccacatt 75
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||||||||| || ||| ||||||||||||||||||| ||||||| |||||| |
Sbjct: 69 cattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggaggaa 128
Query: 208 gtat 211
||||
Sbjct: 129 gtat 132
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 172 aaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||| |||||||||| ||||||| |||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacattt 41
|||||||||||||||||||||| |||||
Sbjct: 120 tttcacaatgtaagtcattctagcattt 93
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaa 103
|||||||||||||||||| || ||| |||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaa 103
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa
Indica Group
Length = 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 65/74 (87%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
||||||||||||||||||| | |||| ||||||||||||| |||||| ||||||||
Sbjct: 16 tttcacaatgtaagtcatttttgtattttccacattcatattgatgtag---attcatta 72
Query: 74 acatcaatatgaat 87
||||||||||||||
Sbjct: 73 acatcaatatgaat 86
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || |||| ||| ||||||||| ||||||| ||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 202 gagggagta 210
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 54.0 bits (27), Expect = 8e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 153 acatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||||| || |||| | | |||||||||| ||||||| ||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 106 atttcccacattcatatttatgttaatgaatcta 139
|||| ||||||||||||| |||||||||||||||
Sbjct: 95 attttccacattcatattgatgttaatgaatcta 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||| ||||||||| || |||| ||||||||||||| ||||
Sbjct: 119 tttcacaatataagtcattttagtattttccacattcatattgatgt 73
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 153 acatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||||||| ||||||| |||||||||||||| |||| ||||||| ||||||||||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagtat 105
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 69.9 bits (35), Expect = 1e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||||||||| || ||| ||||||||||||||||||| ||||||| |||||| |
Sbjct: 66 cattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 172 aaatgctagaatgacttacgttgtgaaccggaggg 206
||||||||||||||||||| ||||||| |||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggaggg 108
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacattt 41
|||||||||||||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacattt 41
|||||||||||||||||||||| |||||
Sbjct: 101 tttcacaatgtaagtcattctagcattt 74
Score = 44.1 bits (22), Expect = 8e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||| || ||| |||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaa 33
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||| |||||| ||||| || ||||||||||||||||||| ||||||| ||||||||
Sbjct: 67 cattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggga 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 78/92 (84%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt--tatgtagtagattcat 71
||||||||| |||||||||||| |||||| |||||||| ||| ||| | ||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcacacattcacattgatattaatgagattcat 75
Query: 72 taacatcaatatgaatatgagaaatgctagaa 103
||| |||||| ||||| || ||||||||||||
Sbjct: 76 taatatcaatgtgaatgtgggaaatgctagaa 107
Score = 63.9 bits (32), Expect = 8e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 143 agatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccgg 202
|||| |||||| |||||| ||||| || ||||||||||||||||||| ||||||| |||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 203 agggagta 210
||| ||||
Sbjct: 128 aggaagta 135
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattca 51
||||||||| |||||||||||| |||||||||||||||
Sbjct: 124 tttcacaatataagtcattctagcatttcccacattca 87
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgactt 188
||||| ||||||||||||||||||| || ||||||||||||||||||
Sbjct: 47 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata 147
||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 98 catttcccacattcatattgatgttaatgaatctaaatagata 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgactt 188
||||| ||||||||||||||||||| || ||||||||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 47 tagattcattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||||||||||||| || ||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaa 104
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 25 aagtcattctaacatttcccacattcatatttatgt 60
||||||||||| ||||||||||||||||||| ||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgt 36
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 25 aagtcattctaacatttcccacattcatatttatgt 60
||||||||||| ||||||||||||||||||| ||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgt 75
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| || ||||||||||||||||
Sbjct: 112 tttcacaatgtaagtcattctagcacttcccacattcatatt 71
Score = 63.9 bits (32), Expect = 8e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 155 atcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||| || ||| |||||||||||||||| ||||||| | |||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 54.0 bits (27), Expect = 8e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||||||||||||||||| || || ||||| |||||||||| || |||| |||||| |
Sbjct: 67 cattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaa 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||| ||||||||||||| || || || ||||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattttagcactttccacattcatattgatgt 62
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgaatatgagcaatgctagaaa 32
Score = 63.9 bits (32), Expect = 8e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgactta 189
||||| |||||||||| ||||||||||||| |||||||||| ||||||
Sbjct: 73 tagattcattaacatctatatgaatatgagcaatgctagaaagactta 26
Score = 54.0 bits (27), Expect = 8e-07
Identities = 79/96 (82%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 115 attcatatttatgttaatgaatctagatagatacattaacatcaatatgaatatgagaaa 174
|||||||| |||||||||||||||||| ||||| |||| ||||||||||| | ||
Sbjct: 49 attcatatagatgttaatgaatctagatt----cattagcatctatatgaatatgggtaa 104
Query: 175 tgctagaatgacttacgttgtgaaccggagggagta 210
|||||||| | |||| || |||| |||||||||||
Sbjct: 105 tgctagaaagtcttatattatgaaacggagggagta 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
||||||||||| |||| ||||||||||| | |||||||||||
Sbjct: 72 tagattcattagcatctatatgaatatgggtaatgctagaaa 113
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 153 acatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||| ||| |||| ||| |||||||||| ||||||| |||||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 8e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 156 tcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||||| ||| |||| |||||||||||||| || |||| ||||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 11 ccatttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||| |||||||||||||||| |||| ||||||||||||
Sbjct: 108 ccatttcataatgtaagtcattctagtatttttcacattcatatt 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||| || |||| |||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 5e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 141 atagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaacc 200
|||||| |||||||||| |||||||| ||| |||||||| |||||||| | || |||| |
Sbjct: 87 atagattcattaacatctatatgaatgtgaaaaatgctaaaatgacttgcattatgaaac 146
Query: 201 ggagggagta 210
||||||||||
Sbjct: 147 ggagggagta 156
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcat 52
||||||||||||||||||| || ||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcat 54
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
|||||||||||||||| |||||||| ||| ||||||||
Sbjct: 88 tagattcattaacatctatatgaatgtgaaaaatgcta 125
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 149 attaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggag 208
||||| |||||||| ||| || ||||||||||||||||||| ||||||| |||||||||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 209 ta 210
||
Sbjct: 6 ta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatatt 84
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 155 atcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||| || ||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 154 catcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccgga 203
|||||||||||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 108 tttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccatattcatatt 57
Score = 58.0 bits (29), Expect = 5e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 158 aatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||| || ||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 161 atgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||| |||||||||||||||||| |||| ||||||| |||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcat 52
||||||||||||| |||||||| |||||| |||||||||
Sbjct: 16 tttcacaatgtaactcattctagcatttctcacattcat 54
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 17 cacaatgtaagtcattctaacatttcccacattcatatt 55
||||||| |||||||| || |||||||||||||||||||
Sbjct: 100 cacaatgcaagtcattttagcatttcccacattcatatt 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgactt 188
||||| ||||||||||||| || ||||||||| ||||||||
Sbjct: 52 cattagcatcaatatgaatgtgggaaatgctaaaatgactt 92
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaat 136
||||||||||||||||||| ||| ||||||||
Sbjct: 80 catttcccacattcatattgatgctaatgaat 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 66 attcattaacatcaatatgaatatgagaaatgcta 100
|||||||| ||||||||||||| || |||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgcta 83
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 103 tttcacaatataagtcattctagcatttcccacattcatatt 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 155 atcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||| || ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 59 atcaatatgaatgtg-gaaatgctagaatgacttatattgtgaaacggagggagtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 156 tcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||||| || ||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 52.0 bits (26), Expect = 3e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| ||||| |||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcattt-ccacattcatatt 56
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 153 acatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||| |||||||| ||||||||| ||||||||||||| || |||| |||||||||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 16 tttcataatgtaagtcattctaacatttctcacattcatat 56
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 20 aatgtaagtcattctaacatttcccacattc 50
|||||||||||||||||||||| ||||||||
Sbjct: 121 aatgtaagtcattctaacattttccacattc 91
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 155 atcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||| || |||||||||||| |||||| ||||||| ||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 63.9 bits (32), Expect = 8e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 155 atcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||| || |||||||||||| |||||| ||||||| |||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||| |||||| ||||| |||||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatatt 57
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||| |||||| ||||| |||||||||||||
Sbjct: 114 tttcacaatgtaagttattctagcattttccacattcatatt 73
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||||||||| | ||| |||||||| |||||||||| ||||||| ||
Sbjct: 62 tagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacg 121
Query: 202 gagggagta 210
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 58.0 bits (29), Expect = 5e-08
Identities = 58/67 (86%), Gaps = 3/67 (4%)
Strand = Plus / Plus
Query: 18 acaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcattaacat 77
||||||||||||||| || |||||||||||| |||| ||| ||| ||||||||||||
Sbjct: 20 acaatgtaagtcattttagtatttcccacatttatatctatctag---attcattaacat 76
Query: 78 caatatg 84
|||||||
Sbjct: 77 caatatg 83
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 118 catatttatgttaatgaatctagatagata 147
|||||| |||||||||||||||||||||||
Sbjct: 83 catattgatgttaatgaatctagatagata 54
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||||| | |||||||||| | ||||| || |||| ||
Sbjct: 73 tagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
||||||||||||||||||||||||||| | |||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatataggcaatgctagaaa 32
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 attcatatttatgttaatgaatctag 140
||||||||| ||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||||||||||||||||||| | |||||| | ||||||| ||||||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 103 aacatttcccacattcatatttatgttaatgaatctagata 143
||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 98 aacattttccacattcatattgatgttaatgaatctagata 58
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||||||| || ||||| |||| |||||||| | ||||| ||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacg 121
Query: 202 gagggagta 210
|||||||||
Sbjct: 122 gagggagta 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
|||||| |||||||||| |||||||||| ||||||||||||| ||||
Sbjct: 119 tttcaccatgtaagtcactctaacattttccacattcatattgatgt 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
|||||||||| |||||| | || |||||| || |||||||| ||| ||| ||||||||
Sbjct: 16 tttcacaatgaaagtcaatttagcatttctcatattcatatatatctag---attcatta 72
Query: 74 acatcaatatgaat 87
||||||||||||||
Sbjct: 73 acatcaatatgaat 86
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||| | | |||||||||||||||||| || |||| ||
Sbjct: 73 tagattcattaacatctatatgaatgttggtaatgctagaatgacttacattatgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| |||||||||||||||| |||| || ||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattaccaacattcatat 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||| |||| || || | |||||||||||||||||| || |||| |||||| |
Sbjct: 96 cattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaacggaggaa 155
Query: 208 gta 210
|||
Sbjct: 156 gta 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacat 48
||||| |||||||||||||||| |||| |||||||
Sbjct: 147 tttcataatgtaagtcattctagcattgcccacat 113
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| ||||||||||| | ||| |||||| | ||||| ||||||| ||
Sbjct: 90 tagattcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| ||||||||||| | ||| |||||||
Sbjct: 90 tagattcattaacatctatatgaatatgggcaatactagaaa 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||| ||||||||||| | | | |||||| | ||||| | ||||| ||||||||
Sbjct: 67 cattaacatctatatgaatatgggcagtactagaaagtcttacatggtgaaacggaggga 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||| || ||||| ||||||| |||||||||| | ||||| ||||||| ||
Sbjct: 73 tagattcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
||||||||||||| || ||||| ||||||| |||||||||||
Sbjct: 73 tagattcattaacgtctatatgtatatgagcaatgctagaaa 32
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
|||||||||||||||| | ||||||||| | |||||||
Sbjct: 90 tagattcattaacatctaaatgaatatgggcaatgcta 127
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 155 atcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||| || |||||||||||| |||||| ||||||| ||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 155 atcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||| || |||||||||||| |||||| ||||||| |||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 61.9 bits (31), Expect = 3e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||| |||||| ||||| |||||||||||||
Sbjct: 114 tttcacaatgtaagttattctagcatttnccacattcatatt 73
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||| |||||| ||||| |||||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatatt 57
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||| |||| |||||||| | | ||||| ||||||| ||
Sbjct: 73 tagattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctag 101
|||||||||||||||| |||||||| |||| ||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgagcaatgctag 35
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 103 aacatttcccacattcatatttatgttaatgaatctagata 143
|||||| |||||||||| || |||||||||||||||||||
Sbjct: 126 aacattgcccacattcacatagatgttaatgaatctagata 86
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 112 cacattcatatttatgttaatgaatctaga 141
||||||||||| |||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattca 51
|||||||||||||| | || ||||||| ||||||||||
Sbjct: 147 tttcacaatgtaagactttttaacattgcccacattca 110
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||||||||||||| | ||| ||||||||||||||||||| ||||||| ||
Sbjct: 62 tagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacg 121
Query: 202 gagggagta 210
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 63.9 bits (32), Expect = 8e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||| |||||||| |||||||||||||| |||| || |||||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
Score = 63.9 bits (32), Expect = 8e-10
Identities = 58/66 (87%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 18 acaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcattaacat 77
|||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||||
Sbjct: 20 acaatgtaagtcattctagtatttctcacattcatatctat---ctagattcattaacat 76
Query: 78 caatat 83
||||||
Sbjct: 77 caatat 82
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 119 atatttatgttaatgaatctagatagata 147
||||| |||||||||||||||||||||||
Sbjct: 82 atattgatgttaatgaatctagatagata 54
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacattt 41
|||||||||||||||||||||| |||||
Sbjct: 119 tttcacaatgtaagtcattctagcattt 92
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagggagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 95 tttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 110 gaaatgctagaatgacttacattgtgaaacggagggagtat 150
Score = 63.9 bits (32), Expect = 8e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacatt 49
|||||||||||||||||||||| |||||||||||||
Sbjct: 138 tttcacaatgtaagtcattctagcatttcccacatt 103
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 171 gaaatgctagaatgacttacgttgtgaa 198
|||||||||||||||||||| |||||||
Sbjct: 67 gaaatgctagaatgacttacattgtgaa 94
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 63.9 bits (32), Expect = 8e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||||||| ||||||| |||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacat 48
|||||||||||||||||||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacat 50
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 173 aatgctagaatgacttacgttgtgaaccggagggagtat 211
||||||||||||| |||| ||||||| ||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagtat 96
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 63.9 bits (32), Expect = 8e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||||||| ||||||| |||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
|||||||||||||||||||||| |||||||||| || |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacgtttatatt 57
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 63.9 bits (32), Expect = 8e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||| |||||||||| ||| |||||||||||||||||||||| |||| || |||||| |
Sbjct: 31 catttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaa 90
Query: 208 gtat 211
||||
Sbjct: 91 gtat 94
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 68 tcattaacatcaatatgaatatgagaaatgctagaa 103
||||| |||||||||| ||| |||||||||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaa 65
Score = 48.1 bits (24), Expect = 5e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 18 acaatgtaagtcattctaacatttcccacattcatatttatgta 61
||||| |||||||||||| |||||| |||||| ||||| |||||
Sbjct: 78 acaatataagtcattctagcatttctcacatttatattgatgta 35
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 63.9 bits (32), Expect = 8e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 151 taacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||| ||||| || ||||||||||||| ||||| ||||||| |||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 8e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 168 tgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 84 tgagaaatgctagaatgacttacattgtgaaacggaggaagtat 127
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/67 (86%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt--agtagattcat 71
||||||||| ||||| |||||| ||||||||||||||| ||| |||| |||||||||
Sbjct: 16 tttcacaatataagttattctagcatttcccacattcacattgatgttatatagattcat 75
Query: 72 taacatc 78
|||||||
Sbjct: 76 taacatc 82
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttc 42
|||||||||||||||||||||| ||||||
Sbjct: 115 tttcacaatgtaagtcattctagcatttc 87
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 172 aaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||||||||||||| ||||||| |||||||||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 163 gaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||| ||||||||||||||||| | ||||||| |||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacatt 49
|||||||||||||||||||||| ||||| |||||||
Sbjct: 105 tttcacaatgtaagtcattctagcattttccacatt 70
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 61.9 bits (31), Expect = 3e-09
Identities = 70/84 (83%), Gaps = 8/84 (9%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga--------tagatacattaacat 156
||||||||||||||||||| |||| |||||||||||| ||||| |||| ||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctagacatctgtctagattcattgacat 64
Query: 157 caatatgaatatgagaaatgctag 180
|||||||||| || ||||||||||
Sbjct: 65 caatatgaatgtgggaaatgctag 88
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagat 146
||||||||||||||||||| |||| |||||||||||| ||||
Sbjct: 84 catttcccacattcatattgatgtcaatgaatctagacagat 43
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctag 101
|||||||||| |||||||||||||| || ||||||||||
Sbjct: 50 tagattcattgacatcaatatgaatgtgggaaatgctag 88
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatg 97
|||||||||| |||||||||||||| || ||||||
Sbjct: 39 tagattcattgacatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
||||| ||||||| | ||| |||||||||||| |||||||||| ||||||| |||||| |
Sbjct: 67 cattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaaacggaggaa 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| ||||||||| ||| || |||||||| ||||||||| ||||||| ||
Sbjct: 84 tagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgtgaaacg 143
Query: 202 gagggagtat 211
||||||||||
Sbjct: 144 gagggagtat 153
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacatt 49
||||||||||||||||||| || |||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttctcacatt 51
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 103 aacatttcccacattcatatttatgttaatgaatctaga 141
|||||| ||||||||||||| ||||||||||||||||||
Sbjct: 3 aacattgcccacattcatatatatgttaatgaatctaga 41
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagata 143
|||| ||||||||||||| ||||||||||||||||||||
Sbjct: 86 cattgcccacattcatatatatgttaatgaatctagata 48
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagata 147
|||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 5 catttcccacgttcatattgatattaatgaatctagatagata 47
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagat 142
|||||||||| |||||||| || |||||||||||||||
Sbjct: 87 catttcccacgttcatattgatattaatgaatctagat 50
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctag 101
|||||||||||| ||||||||||| || ||||||||||
Sbjct: 39 tagattcattaatatcaatatgaacgtgggaaatgctag 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctag 101
|||||||||||| ||||||||||| || ||||||||||
Sbjct: 53 tagattcattaatatcaatatgaacgtgggaaatgctag 91
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 61.9 bits (31), Expect = 3e-09
Identities = 90/109 (82%), Gaps = 3/109 (2%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctag---atagatacattaacatcaata 161
|||| ||||||| ||||| |||||||||||||||| ||||| |||||||||| |
Sbjct: 113 cattgcccacatacatatagatgttaatgaatctagtgtctagattcattaacatctaag 54
Query: 162 tgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||| |||| |||||||||| | ||||| ||||||| |||||| ||||
Sbjct: 53 tgaatgtgagcaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 75/89 (84%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 125 atgttaatgaatctaga---tagatacattaacatcaatatgaatatgagaaatgctaga 181
||||||||||||||||| ||||| |||||||||| ||||| || || | |||||||||
Sbjct: 59 atgttaatgaatctagacactagattcattaacatctatatgtatgtgggcaatgctaga 118
Query: 182 atgacttacgttgtgaaccggagggagta 210
| | ||||| || |||| |||||||||||
Sbjct: 119 aagtcttacattatgaaacggagggagta 147
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| | ||||| |||| |||||||||||
Sbjct: 73 tagattcattaacatctaagtgaatgtgagcaatgctagaaa 32
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| ||||| || || | |||||||||||
Sbjct: 79 tagattcattaacatctatatgtatgtgggcaatgctagaaa 120
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagata 143
|||| ||||||||||||| ||||||||||||||||||||
Sbjct: 15 cattgcccacattcatatatatgttaatgaatctagata 53
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 66 tagattcattaacatctatatgaatgtgggcaatgctagaaa 107
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctag 140
|||| ||||||||||||| ||||||||||||||||
Sbjct: 100 cattgcccacattcatatagatgttaatgaatctag 65
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
||||||||||||||| |||||||| || | |||||||||||
Sbjct: 49 tagattcattaacatatatatgaatgtgggcaatgctagaaa 8
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 152 aacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||| ||||||||||||| |||||||||| | ||||| |||| || |||||||||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 73 aacatcaatatgaatatgagaaatgctagaaa 104
|||||| ||||||||||||| |||||||||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaa 81
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||||||| || ||||||||||||||||||
Sbjct: 98 tttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 181 aatgacttacgttgtgaaccggagggagta 210
|||||||||| ||||||| |||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 154 catcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||| |||||||| || ||||||||||||||||||| || |||| ||||||||||||
Sbjct: 61 catcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagtat 4
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatat 56
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||||||||| || ||| ||| ||||||||||||| || |||| ||
Sbjct: 90 tagattcattagcatcaatatggatgtgaacaatagtagaatgacttacattatgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 112 cacattcatatttatgttaatgaatctagatagata 147
||||| |||||| ||| |||||||||||||||||||
Sbjct: 117 cacatccatattgatgctaatgaatctagatagata 82
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctagtatttcccacattcatatt 57
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 106 atttcccacattcatatttatgttaatgaatctagatagata 147
|||||||||||||||||| || |||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatactaatgaatctagatagata 81
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||| |||||||||||||| | |||||||||||||||||||
Sbjct: 144 tttcataatgtaagtcattccaccatttcccacattcatatt 103
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||||||||||| || ||||| ||||||||||||| ||||||| ||
Sbjct: 73 tagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 141 atagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaacc 200
|||||| |||||||||| |||||||| | | |||||||||| | ||||| ||||||| |
Sbjct: 89 atagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaac 148
Query: 201 ggagggagta 210
||||||||||
Sbjct: 149 ggagggagta 158
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| | | |||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaa 131
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 154 catcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||| |||||||| || ||||||||||||||||||| || |||| ||||||||||||
Sbjct: 61 catcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagtat 4
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatat 56
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||| ||||| || ||| |||| |||||||||||||| || |||| ||
Sbjct: 90 tagattcattagcatcgatatggatgtgaaaaatactagaatgacttacattatgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 149 attaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggag 208
|||||||||||||||||| || |||| ||| |||||||||| ||||||| |||||| ||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 209 ta 210
||
Sbjct: 6 ta 5
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgt 60
||||||||||||||||||| || |||| ||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattttagtattttccacattcatattgatgt 62
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 141 atagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaacc 200
|||||| |||||||||| |||||||| || | |||||||||| | ||||| || |||| |
Sbjct: 71 atagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaac 130
Query: 201 ggagggagta 210
||||||||||
Sbjct: 131 ggagggagta 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaa 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatcta 139
|||| ||||||||||||| |||||||||||||||
Sbjct: 106 cattgcccacattcatatagatgttaatgaatcta 72
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 58.0 bits (29), Expect = 5e-08
Identities = 73/87 (83%), Gaps = 3/87 (3%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
||||||||| ||||||||| |||||||| ||||||||||| | | |||||||||||
Sbjct: 119 tttcacaatataagtcattttaacatttttcacattcatatctgt---ctagattcatta 63
Query: 74 acatcaatatgaatatgagaaatgcta 100
|||| ||| | ||||||| ||||||||
Sbjct: 62 acattaatgtaaatatgaaaaatgcta 36
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| ||||| ||||| | || ||||||||||||||| || |||| ||
Sbjct: 73 tagattcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaacg 14
Query: 202 gagggagta 210
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||| |||||||| || | ||||||| |||||||||| || |||| ||
Sbjct: 90 tagattcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| ||||||||||||| || |||| |||||||||||||
Sbjct: 147 tttcataatgtaagtcattttagcattgcccacattcatat 107
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| ||||| ||||| |||||||||| | ||||| ||||||| ||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcat 52
|||||||||||||| | ||||| |||| |||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattacccacattcat 54
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaa 131
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||| || | ||| |||||| | ||||| ||||||| ||
Sbjct: 90 tagattcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 54.0 bits (27), Expect = 8e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||| ||||||||||| | | | |||||| | ||||| ||||||| ||||||||
Sbjct: 67 cattaacatctatatgaatatgggcagtactagaaagtcttacattgtgaaacggaggga 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 110 cccacattcatatttatgttaatgaatctaga 141
||||||||||||| |||||||||||||||||
Sbjct: 119 cccacattcatatagatgttaatgaatctaga 88
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | ||| |||||||
Sbjct: 90 tagattcattaacatctatatgaatgtgggcaatactagaaa 131
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||| | |||||||||| |||||||||||||
Sbjct: 147 tttcacaatgtaagactttctaacattgcccacattcatat 107
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||| |||||||| || | |||| ||||| | ||||| ||||||| ||
Sbjct: 90 tagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacg 149
Query: 202 gagggagtat 211
||||||||||
Sbjct: 150 gagggagtat 159
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 103 aacatttcccacattcatatttatgttaatgaatctaga 141
|||||| ||||||||||||| ||| |||||||||||||
Sbjct: 126 aacattgcccacattcatatagatgctaatgaatctaga 88
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
|||| ||||||||||||| ||||||||||||||||||
Sbjct: 98 cattacccacattcatatatatgttaatgaatctaga 62
Score = 54.0 bits (27), Expect = 8e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 42 cccacattcatatttatgtagtagattcattaacatcaatatgaatatgagaaatgctag 101
||||||||||||| ||||| ||||||||||||||| |||||||| || | ||||||||
Sbjct: 44 cccacattcatatatatgtc-tagattcattaacatatatatgaatgtgggtaatgctag 102
Query: 102 aaa 104
|||
Sbjct: 103 aaa 105
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 103 aacatttcccacattcatatttatgttaatgaatctagata 143
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 96 aacatttcccacattcatataggtgttaatgaatctagata 56
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 29 cattctaacatttcccacattcatat 54
||||||||||||||||||||||||||
Sbjct: 102 cattctaacatttcccacattcatat 77
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||| |||| ||||||| || | ||||| || |||| ||
Sbjct: 73 tagattcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
|||||||||||||||| |||||||| |||| |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgaggaatgcta 36
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgtgggcaatgctagaaa 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
|||| ||||||||||||| |||||||||||||||||
Sbjct: 124 cattgcccacattcatatagatgttaatgaatctaga 88
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 112 cacattcatatttatgttaatgaatctaga 141
||||||||||| |||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctaga 75
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||| |||| ||||||| || | ||||| || |||| ||
Sbjct: 90 tagattcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatgaaacg 149
Query: 202 gagggagta 210
|||||||||
Sbjct: 150 gagggagta 158
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaa 32
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
|||||||||||||||| |||||||| |||| |||||||
Sbjct: 90 tagattcattaacatctatatgaatgtgagcaatgcta 127
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
|||| ||||||||||||| |||||||||||||||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 112 cacattcatatttatgttaatgaatctaga 141
||||||||||| |||||||||||||||||
Sbjct: 117 cacattcatatagatgttaatgaatctaga 88
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||| |||||||| || | |||||||||| | ||||| || |||| ||||||||
Sbjct: 67 cattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggga 8
Query: 208 gtat 211
||||
Sbjct: 7 gtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaaa 104
||||||||||||| |||||||| || | |||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaa 32
Score = 46.1 bits (23), Expect = 2e-04
Identities = 86/106 (81%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
|||| ||||||||||||| |||||||||||| |||| | | | | ||||| ||||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaatttagacacacagac--acatctatatga 96
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || | |||||||||| | ||||| || |||| |||||||||||
Sbjct: 97 atgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacatt 49
|||||||||||||||||||||| ||||||| |||||
Sbjct: 78 tttcacaatgtaagtcattctagcatttcctacatt 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggag 204
|||||||||||||||||||| ||||||| |||||
Sbjct: 50 gaaatgctagaatgacttacattgtgaaacggag 83
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 177 ctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||||| ||||||| |||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtat 4
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattcta 35
||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||||||| || |||| |||||||||||
Sbjct: 89 gaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacat 48
||||| |||||||||||||||| ||||||||||||
Sbjct: 117 tttcataatgtaagtcattctagcatttcccacat 83
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| ||| ||||||||||||||||||| |||||| ||||
Sbjct: 16 tttcataatataagtcattctaacatttctcacatttatat 56
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||| |||||||||| ||||||| |||||||||||
Sbjct: 44 gaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 172 aaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagtat 109
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcat 52
||||||||||||||||||| || |||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccaca 47
|||||||||||||||||||||| ||||| |||||
Sbjct: 97 tttcacaatgtaagtcattctagcattttccaca 64
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcata 53
|||||||||||||||||||||| |||| |||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagtattttccacattcata 55
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 172 aaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||| |||||||||||||| ||||||| |||||| |||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggaggaagtat 4
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 169 gagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||| ||||||||||||| ||||||| |||||| ||||
Sbjct: 98 gagaaatcctagaatgacttatattgtgaaacggaggaagta 139
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttc 42
|||||||||||||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 17 cacaatgtaagtcattctaacatttcccacat 48
||||||||||||||||||| ||||||||||||
Sbjct: 19 cacaatgtaagtcattctagcatttcccacat 50
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 176 gctagaatgacttacgttgtgaaccggagggagta 210
||||||||||||||| ||||||| |||||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 171 gaaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||||||||||| ||||| | |||||| |||||
Sbjct: 44 gaaatgctagaatgacttacattgtggaacggaggaagtat 4
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattcta 35
||||||||||||||||||||||
Sbjct: 83 tttcacaatgtaagtcattcta 62
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 110 cccacattcatatttatgttaatgaatctaga 141
||||||||||||| ||||||||||||||||||
Sbjct: 44 cccacattcatatatatgttaatgaatctaga 75
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctagata 143
|||| ||||||||||||| |||||||||||||||||||
Sbjct: 11 cattgcccacattcatatggatgttaatgaatctagata 49
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 103 aacatttcccacattcatatttatgttaatgaatctaga 141
|||||| ||||||||||||| |||||||||||||||||
Sbjct: 104 aacattgcccacattcatatggatgttaatgaatctaga 66
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 45 tagattcattaacatccatatgaatgtgggcaatgctagaaa 4
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||| ||||||
Sbjct: 68 tagattcattaacatccatatgaatgtgggcaatgttagaaa 109
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 54.0 bits (27), Expect = 8e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 149 attaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggag 208
||||| |||||||| ||| ||| |||| |||||||||||| | ||||||| |||||| ||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 209 tat 211
|||
Sbjct: 107 tat 109
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 178 tagaatgacttacgttgtgaaccggagggagta 210
||||||||||||| ||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattcta 35
||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 54.0 bits (27), Expect = 8e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 149 attaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggag 208
||||||||| |||||||| || ||||||||||| |||||| || |||| |||||||||
Sbjct: 76 attaacatctatatgaatgtggacaatgctagaataacttacattatgaaacggagggag 135
Query: 209 tat 211
|||
Sbjct: 136 tat 138
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 103 aacatttcccacattcatatttatgttaatgaatctaga 141
||||||||||||||||||||| ||| ||||||| |||||
Sbjct: 3 aacatttcccacattcatattgatgctaatgaaactaga 41
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 103 aacatttcccacattcatatttatgttaatgaatctaga 141
||||||||||||||||||||| ||| |||| ||||||||
Sbjct: 114 aacatttcccacattcatattgatgctaataaatctaga 76
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 33 ctaacatttcccacattcatatt 55
|||||||||||||||||||||||
Sbjct: 1 ctaacatttcccacattcatatt 23
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 33 ctaacatttcccacattcatatt 55
|||||||||||||||||||||||
Sbjct: 116 ctaacatttcccacattcatatt 94
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 103 aacatttcccacattcatatttatgttaatgaatctaga 141
|||||| ||||||||||||| ||||| ||||||||||||
Sbjct: 37 aacattgcccacattcatatatatgtcaatgaatctaga 75
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 31 ttctaacatttcccacattcatatttatgt 60
|||||||||| ||||||||||||| |||||
Sbjct: 33 ttctaacattgcccacattcatatatatgt 62
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 8e-07
Identities = 76/91 (83%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatgtagtagattcatta 73
||||| |||||||| | ||||| |||| |||||||||||| |||| |||||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgtccacattcatatagatgtc-tagattcatta 74
Query: 74 acatcaatatgaatatgagaaatgctagaaa 104
||||| |||||||| || |||||||||||
Sbjct: 75 acatctatatgaatgtggacaatgctagaaa 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 111 ccacattcatatttatgttaatgaatctaga 141
|||||||||||| |||||||||||||||||
Sbjct: 92 ccacattcatatagatgttaatgaatctaga 62
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 111 ccacattcatatttatgttaatgaatctaga 141
|||||||||||| ||||||||||||||||||
Sbjct: 21 ccacattcatatatatgttaatgaatctaga 51
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 66 tagattcattaacatctatatgaatgtgggcaatgctagaaa 107
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctag 140
|||| ||||||||||||| ||||||||||||||||
Sbjct: 100 cattgcccacattcatatagatgttaatgaatctag 65
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagata 143
|||| ||||||||||||| |||||||||||||||||||
Sbjct: 125 cattgcccacattcatatagatgttaatgaatctagata 87
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 91 tagattcattaacatctatatgaatgtgggcaatgctagaaa 132
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 111 ccacattcatatttatgttaatgaatctaga 141
|||||||||||| ||||||||||||||||||
Sbjct: 95 ccacattcatatatatgttaatgaatctaga 65
Score = 50.1 bits (25), Expect = 1e-05
Identities = 64/76 (84%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 31 ttctaacatttcccacattcatatttatgtag--tagattcattaacatcaatatgaata 88
||||| |||| ||||||||||||| ||||| | ||||||||||||||| ||||||||
Sbjct: 33 ttctagcattacccacattcatatatatgttgtctagattcattaacatatatatgaatg 92
Query: 89 tgagaaatgctagaaa 104
|| |||||||||||
Sbjct: 93 tggacaatgctagaaa 108
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 143 agatacattaacatcaatatgaatatgagaaatgctagaatgactta 189
|||| |||||||||| |||||||| || | |||||||||||||||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaatgctagaatgactta 26
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| ||| |||||||||||| |||| |||||||||||||
Sbjct: 16 tttcataatataagtcattctagcattgcccacattcatat 56
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 64 agattcattaacatcaatatgaatatgagaaatgctagaa 103
||||||||||||||| |||||||| || | ||||||||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaatgctagaa 33
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatct 138
|||| ||||||||||||| ||||||||||||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaatct 72
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 177 ctagaatgacttacgttgtgaaccggagggagta 210
||||||||||||| ||||||| |||||||||||
Sbjct: 123 ctagaatgacttatattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaa 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatcta 139
|||| ||||||||||||| |||||||||||||||
Sbjct: 98 cattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| ||||| |||| | |||||| || | |||||||||| | ||||| ||||||| ||
Sbjct: 90 tagattcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 202 gagggagtat 211
||||||||||
Sbjct: 150 gagggagtat 159
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| ||||| || |||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaa 131
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 129 tttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatt 55
||||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagttattgtataatttctcacattcatatt 57
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaa 32
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| |||||||||| ||||| |||| |||||||||||||
Sbjct: 16 tttcataatgtaagtctttctagcattgcccacattcatat 56
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
|||| ||||||||||||| |||||||||||||||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaatctaga 75
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaa 32
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| | |||||||| || ||||||| || | ||||| || |||| ||
Sbjct: 88 tagattcattaacatctagatgaatataagcaatgctacaaagtcttacattatgaaacg 147
Query: 202 gagggagtat 211
||||||||||
Sbjct: 148 gagggagtat 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
||||| |||||||||| ||||| |||| |||||||||||||
Sbjct: 16 tttcataatgtaagtctttctagcattgcccacattcatat 56
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
|||| ||||||||||||| |||||||||||||||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
|||||||||||||||| | |||||||| || |||||||
Sbjct: 88 tagattcattaacatctagatgaatataagcaatgcta 125
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 149 attaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggag 208
||||||||| |||||||| || |||||||||| | ||||| ||||||| |||||||||
Sbjct: 79 attaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacggagggag 138
Query: 209 ta 210
||
Sbjct: 139 ta 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 153 acatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||| ||||||||||| ||||||| || | ||||| ||||||| ||||||||||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaa 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatcta 139
|||| ||||||||||||| |||||||||||||||
Sbjct: 98 cattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| ||||| || || | ||||||||||||| |||| || |||| |
Sbjct: 64 tagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaaca 123
Query: 202 gagggagtat 211
||||||||||
Sbjct: 124 gagggagtat 133
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 159 atatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||| ||||| | |||||||||||||||||| || |||| |||||| ||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaa 32
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaaa 133
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatcta 139
|||| ||||||||||||| |||||||||||||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 141 atagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaacc 200
|||||| |||||||||| |||||||| || | |||||||||| | |||| | |||| |
Sbjct: 91 atagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 150
Query: 201 ggagggagtat 211
|||||||||||
Sbjct: 151 ggagggagtat 161
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatcta 139
|||| ||||||||||||| |||||||||||||||
Sbjct: 126 cattgcccacattcatatagatgttaatgaatcta 92
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| | ||||||||| | |||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatatgggcaatgctagaaa 32
Score = 44.1 bits (22), Expect = 8e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| ||||| | || | ||| |||||| | ||||| ||||||| ||
Sbjct: 90 tagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacg 149
Query: 202 gagggagtat 211
||||||||||
Sbjct: 150 gagggagtat 159
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
||||||||||||||| ||||||||||| | |||||||||||
Sbjct: 49 tagattcattaacatatatatgaatatgggcaatgctagaaa 8
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 66 tagattcattaacatctatatgaatgtgggcaatgctagaaa 107
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctag 140
|||| |||| |||||||| |||||||||||||||||
Sbjct: 15 cattgcccatattcatatatatgttaatgaatctag 50
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctag 140
|||| ||||||||||||| ||||||||||||||||
Sbjct: 100 cattgcccacattcatatagatgttaatgaatctag 65
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatct 138
|||| ||||||||||||| |||||||||||||||
Sbjct: 124 cattgcccacattcatatatatgttaatgaatct 91
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
|||| ||||||||||||| ||||||||| ||||||||
Sbjct: 39 cattgcccacattcatatatatgttaataaatctaga 75
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 154 catcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggagggagtat 211
||||||||| |||||| |||||||||||||||||| || |||| |||||||||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagtat 140
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 172 aaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||| |||||||||||||| || |||| ||||||||||||
Sbjct: 43 aaatactagaatgacttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | |||||||||||
Sbjct: 58 tagattcattaacatctatatgaatgtgggcaatgctagaaa 99
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
|||| ||||||||||||| |||||||||||||||||
Sbjct: 92 cattgcccacattcatatagatgttaatgaatctaga 56
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||| | ||||| |||| |||||||||||||
Sbjct: 115 tttcacaatgtaagactttctagcattgcccacattcatat 75
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
|||| ||||||||||||| || |||||||||||||||
Sbjct: 39 cattgcccacattcatatatacgttaatgaatctaga 75
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattc 50
|||||||||||||||||||||| || || ||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcactttccacattc 52
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 175 tgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||| ||||||| |||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctaga 141
|||| ||||||||||||| || |||||||||||||||
Sbjct: 94 cattgcccacattcatatatacgttaatgaatctaga 58
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 170 agaaatgctagaatgacttacgttgtgaaccggagggagta 210
||||||||||||||||||||| || |||| || ||||||||
Sbjct: 106 agaaatgctagaatgacttacattatgaaacgaagggagta 146
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 172 aaatgctagaatgacttacgttgtgaaccggagggagtat 211
|||||||||||||||||| || |||| ||||||||||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacggagggagtat 4
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| ||||| || || | |||||||||| | |||| ||||||| ||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 202 gagggagta 210
|||||||||
Sbjct: 128 gagggagta 136
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| ||||| || || | |||||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaa 109
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| ||||| || || | |||||||||| | |||| ||||||| ||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| ||||| || || | |||||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaa 32
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||| ||| ||||| ||||| | ||| ||||||||||||| || |||| ||
Sbjct: 73 tagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaacg 14
Query: 202 gagggagta 210
|||||||||
Sbjct: 13 gagggagta 5
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 173 aatgctagaatgacttacgttgtgaaccggagggagta 210
|||||||||||||||||| || |||| |||||| ||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||||||||| | ||||| |||| |||||||||||||
Sbjct: 123 tttcacaatgtaagactttctagcattgcccacattcatat 83
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||| ||||||||| |||||||| || | |||||||||||
Sbjct: 66 tagatttattaacatctatatgaatgtgggcaatgctagaaa 107
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctag 140
|||| ||||||||||||| |||| ||||||||||||
Sbjct: 124 cattgcccacattcatatatatgctaatgaatctag 89
Score = 44.1 bits (22), Expect = 8e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcatatttatg 59
||||| |||||||| | ||||| |||| ||||||||||||| ||||
Sbjct: 147 tttcataatgtaagactttctagcattgcccacattcatatatatg 102
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 105 catttcccacattcatatttatgttaatgaatctag 140
|||| ||||||||||||| |||| ||||||||||||
Sbjct: 18 cattgcccacattcatatctatgctaatgaatctag 53
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 20 aatgtaagtcattctaacatttcccacattcatat 54
|||||||| | |||||||||| |||||||||||||
Sbjct: 120 aatgtaagactttctaacattgcccacattcatat 86
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 5e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 11 ccatttcacaatgtaagtcattctaacatttcccacattcatat 54
|||||||| |||||||| | ||||| |||| |||||||||||||
Sbjct: 122 ccatttcataatgtaagactttctagcattgcccacattcatat 79
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 110 cccacattcatatttatgttaatgaatctaga 141
||||||||||||| |||||||||||||||||
Sbjct: 20 cccacattcatatagatgttaatgaatctaga 51
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| |||||||| || | ||||||||||
Sbjct: 49 tagattcattaacatctatatgaatgtgggtgatgctagaaa 8
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 46.1 bits (23), Expect = 2e-04
Identities = 86/106 (81%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 105 catttcccacattcatatttatgttaatgaatctagatagatacattaacatcaatatga 164
|||| ||||||||||||| |||||||||||| |||| | | | | ||||| ||||||
Sbjct: 108 cattgcccacattcatatagatgttaatgaatttagacacacagac--acatctatatga 51
Query: 165 atatgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|| || | |||||||||| | ||||| || |||| |||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||| ||||||||||| | ||| |||||| | |||| || |||| ||||||||
Sbjct: 67 cattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacggaggga 8
Query: 208 gta 210
|||
Sbjct: 7 gta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 111 ccacattcatatttatgttaatgaatctaga 141
|||||||||||| |||||||||||||||||
Sbjct: 118 ccacattcatatagatgttaatgaatctaga 88
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 67 ttcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||| ||||||||||| | ||| |||||||
Sbjct: 69 ttcattaacatctatatgaatatgggcaatactagaaa 32
Score = 44.1 bits (22), Expect = 8e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||| || ||| ||| || | ||||| ||||||| ||
Sbjct: 90 tagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacg 149
Query: 202 gagggagtat 211
||||||||||
Sbjct: 150 gagggagtat 159
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 66 attcattaacatcaatatgaatatgagaaatgcta 100
||||||||||||| ||||| ||||||| |||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgcta 106
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 14 tttcacaatgtaagtcattctaacatttcccacattcat 52
|||||||||||||| | ||||| |||| |||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattacccacattcat 54
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||||||| | |||||| || | |||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaa 32
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 66 attcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||| |||| ||||||||||| | |||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaa 87
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 66 attcattaacatcaatatgaatatgagaaatgcta 100
||||||||||||| ||||| ||||||| |||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgcta 36
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 168 tgagaaatgctagaatgacttacgttgtgaaccggagggagta 210
|||| |||||||||| ||||||| || |||| |||||||||||
Sbjct: 41 tgagcaatgctagaaagacttacattatgaaacggagggagta 83
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 ccacattcatatttatgttaatgaatctaga 141
|||||||||||| |||||||||||||||||
Sbjct: 45 ccacattcatatagatgttaatgaatctaga 75
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 148 cattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccggaggga 207
|||||||||| ||||||||||| | ||| |||||| | |||| || |||| ||||||||
Sbjct: 96 cattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacggaggga 155
Query: 208 gta 210
|||
Sbjct: 156 gta 158
Score = 44.1 bits (22), Expect = 8e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 142 tagatacattaacatcaatatgaatatgagaaatgctagaatgacttacgttgtgaaccg 201
||||| |||||||||| |||||||| || ||| ||| || | ||||| ||||||| ||
Sbjct: 73 tagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacg 14
Query: 202 gagggagtat 211
||||||||||
Sbjct: 13 gagggagtat 4
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 67 ttcattaacatcaatatgaatatgagaaatgctagaaa 104
|||||||||||| ||||||||||| | ||| |||||||
Sbjct: 94 ttcattaacatctatatgaatatgggcaatactagaaa 131
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 110 cccacattcatatttatgttaatgaatcta-gatagatacattaacatcaatatg 163
||||||| ||||| ||||||||||||||| | ||||| |||||||||| |||||
Sbjct: 1 cccacatacatatagatgttaatgaatctatgttagattcattaacatctatatg 55
Score = 46.1 bits (23), Expect = 2e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 110 cccacattcatatttatgttaatgaatct-agatagatacattaacatcaatatg 163
||||||| ||||| |||||||||||||| | |||||| |||||||||| |||||
Sbjct: 63 cccacatacatatagatgttaatgaatctaacatagattcattaacatctatatg 9
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 63 tagattcattaacatcaatatgaatatgagaaatgcta 100
||||||||||| |||||||| ||||||| ||||||||
Sbjct: 38 tagattcattagtatcaatataaatatgaaaaatgcta 75
