miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 141/158 (89%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| |||| |||||||| ||| ||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagc-atttcccacattcatattgatgtt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||| |||||||||| |||||| ||| ||| ||||||||||||| | |
Sbjct: 99 aatgaatctag-ataaatatatatgta-tagattcatt-aacatcaatatgaatatggaa 43
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||||||||| |||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggagggagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 134/152 (88%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||||||| |||| |||| ||||||| ||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagc-attttccatattcatattgatgt 62
Query: 66 taatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatag 124
|||||||||||| |||| |||| ||| ||||||| ||| ||| ||||||||||| | |
Sbjct: 63 taatgaatctatacatatatatttat---ctagattcatt-aacatcaatatgaatgtgg 118
Query: 125 gaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||||||||||||||||||||||
Sbjct: 119 gaaatgctagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 145/164 (88%), Gaps = 4/164 (2%)
Strand = Plus / Plus
Query: 4 ttgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgat 63
|||||||||||||||||||||||||||||||| |||| |||| ||| || ||| ||||
Sbjct: 2 ttgtacttcctccgtttcacaatgtaagtcattctagc-attttccacatccatattgat 60
Query: 64 gttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatata 123
||||||||||||| ||||||||||||||| |||||| ||| ||| |||||||||| |
Sbjct: 61 gttaatgaatctag-atagatatatatgtc-tagattcatt-aacaacaatatgaatgtg 117
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagtatat 167
|||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 118 ggaaatactagaatgacttacattgtgaaacggagggagtatat 161
Score = 89.7 bits (45), Expect = 1e-17
Identities = 128/151 (84%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| |||||||| ||| ||| || ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagt-atttcccacattcatattgttgtt 100
Query: 67 aatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| ||||||| ||| ||| |||||||| || | |
Sbjct: 99 aatgaatctagacatatatatctat---ctagattcatt-aacatcaatatggatgtgga 44
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 141 bits (71), Expect = 4e-33
Identities = 141/158 (89%), Gaps = 6/158 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| ||||| ||| ||||| |||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagc-atttcacat--ttatattgatgtt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||| ||||||| ||||||||||||||| |||||| ||| ||| ||||||||||||| |||
Sbjct: 99 aataaatctat-atagatatatatgtc-tagattcatt-aacatcaatatgaatatggga 43
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||| ||||||||||||||||||||||| |||||||
Sbjct: 42 aatgcttgaatgacttacattgtgaaacggagggagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 137/159 (86%), Gaps = 8/159 (5%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| |||||||||||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagc-atttcccatattcatattgatgtt 63
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| |||||||||| ||| ||||||| ||| | |
Sbjct: 64 aatgaatctagacatatatatctat---atagatttatt-aacatcaatataaatgt--g 117
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||| |||||||
Sbjct: 118 aaatgctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 141 bits (71), Expect = 4e-33
Identities = 141/158 (89%), Gaps = 6/158 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| ||||| ||| ||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagc-atttcacat--ttatattgatgtt 61
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||| ||||||| ||||||||||||||| |||||| ||| ||| ||||||||||||| |||
Sbjct: 62 aataaatctat-atagatatatatgtc-tagattcatt-aacatcaatatgaatatggga 118
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||| ||||||||||||||||||||||| |||||||
Sbjct: 119 aatgcttgaatgacttacattgtgaaacggagggagta 156
Score = 107 bits (54), Expect = 5e-23
Identities = 137/159 (86%), Gaps = 8/159 (5%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| |||||||||||| ||| |||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagc-atttcccatattcatattgatgtt 98
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| |||||||||| ||| ||||||| ||| | |
Sbjct: 97 aatgaatctagacatatatatctat---atagatttatt-aacatcaatataaatgt--g 44
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||| |||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 133 bits (67), Expect = 9e-31
Identities = 139/158 (87%), Gaps = 5/158 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| |||| |||||||| ||| ||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagc-atttcccacattcatattgatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| || | || |||||| |||||| ||| ||| ||||||||||| | |||
Sbjct: 64 aatgaatctagcaca--tacatatgtt-tagattcatt-aacatcaatatgaatgtggga 119
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||||||||| |||||||
Sbjct: 120 aatgctagaatgacttacattgtgaaacggagggagta 157
Score = 129 bits (65), Expect = 1e-29
Identities = 132/151 (87%), Gaps = 5/151 (3%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||||||| |||| |||||||| ||| ||| ||||||
Sbjct: 158 gtactccctccgtttcacaatgtaagtcattctagc-atttcccacattcatattgatgt 100
Query: 66 taatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
||||||||||| | |||| ||||| ||||||| ||| ||| ||||||||||| | ||
Sbjct: 99 taatgaatctaa---acatatgtatgtgctagattcatt-aacatcaatatgaatgtggg 44
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 139/158 (87%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| |||| |||| ||| ||| || |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagc-attttccacattcgtattgatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||||| |||| ||||||||||||||| |||||| ||| | | ||||||||||||||| |
Sbjct: 64 aatgactctag-atagatatatatgtc-tagattcatt-agcatcaatatgaatatagaa 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||| |||||||||||| |||||||
Sbjct: 121 aatgctagaatgacttatattgtgaaacggagggagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 133/160 (83%), Gaps = 6/160 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||||||| |||||||| |||| |||| | ||||| ||| ||||| |
Sbjct: 158 tactccctccgtttcacaatataagtcattctagc-attttctatattcatattgatgct 100
Query: 67 aatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| ||||| | ||| ||| |||||| |||| | |
Sbjct: 99 aatgaatctagacatatatatctat---ctagagtcatt-aacatcaatacgaatgtgga 44
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||||||||||||||||||||||| || |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 131 bits (66), Expect = 3e-30
Identities = 143/163 (87%), Gaps = 8/163 (4%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataa----tg 61
|||||||||||||||||||||||||||||| |||| ||||| |||||| ||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagc-atttcgcatattcatacatagtg 62
Query: 62 atgttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaata 121
||||||||||||||| ||||||||||||||| |||||| ||| ||| ||| |||||||
Sbjct: 63 atgttaatgaatctag-atagatatatatgtc-tagattcatt-aacatcactatgaatg 119
Query: 122 taggaaatgctagaatgacttacattgtgaaacggggggagta 164
| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 120 tgggaaatgctagaatgacttacattgtgaaacggagggagta 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 131/155 (84%), Gaps = 10/155 (6%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||||||| ||| ||| |||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctag-catttcccacattcatagtgatgtt 104
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtca----atatgaata 121
|||||||||| |||| |||| ||| ||||||| ||| ||| ||| ||||||||
Sbjct: 103 aatgaatctagacatatatatctat---ctagattcatt-aacatcactatgtatgaata 48
Query: 122 taggaaatgctagaatgacttacattgtgaaacgg 156
| ||||||||||||||||||||||||||||||||
Sbjct: 47 tgcgaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 139/158 (87%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||||||| |||||||| |||| |||||||| ||| ||| | |||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagc-atttcccacattcatattaatgtt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||||||||||||||| |||||| ||| ||| ||||||||||| | ||
Sbjct: 99 aatgaatctag-atagatatatatgtc-tagattcatt-aacatcaatatgaatgtgggt 43
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
||||||| |||||||||||||||||||||| |||||||
Sbjct: 42 aatgctataatgacttacattgtgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 129/151 (85%), Gaps = 6/151 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| |||| |||| ||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatag-cattacccacattcatattgatgtt 63
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| ||||||| ||| ||| | ||||||||| | ||
Sbjct: 64 aatgaatctagacatatatatctat---ctagattcatt-aacattaatatgaatgtggg 119
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||| ||||||||| ||||||||||||
Sbjct: 120 aaatgctaaaatgacttatattgtgaaacgg 150
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 143/164 (87%), Gaps = 4/164 (2%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
||||||||||||||||||||| ||||||||| |||| |||||||| ||||||| |||||
Sbjct: 160 tgtacttcctccgtttcacaaagtaagtcattttagc-atttcccacatttatattgatg 102
Query: 65 ttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatag 124
|||||||||||| ||||| ||||||||| |||||| || ||| ||||||| ||| | |
Sbjct: 101 ttaatgaatctag-atagaaatatatgtc-tagattcat-aaacatcaatataaatgtgg 45
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagtatata 168
||||||| | |||||||||| ||||||||||| |||||||||||
Sbjct: 44 gaaatgcaaaaatgacttactttgtgaaacggagggagtatata 1
Score = 73.8 bits (37), Expect = 7e-13
Identities = 126/151 (83%), Gaps = 6/151 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||| ||||||||| | | ||||||||| ||||||| |||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttg-catttcccacatttatattgatgtt 63
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
||||||||| |||| || | ||| ||||||| ||| ||| ||||||| ||| | ||
Sbjct: 64 tatgaatctagacatatatttctat---ctagattcatt-aacatcaatataaatgtggg 119
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||| |||||||||| |||||||||||
Sbjct: 120 aaatgctaaaatgacttactttgtgaaacgg 150
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 134/152 (88%), Gaps = 4/152 (2%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgttaatgaat 73
|||||||||||||||||||||| || ||||||| || ||| ||| ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattcta-ccatttctcacattcatattgatgttaatgaat 70
Query: 74 ctatcatagatatatatgtcctagatttattnaacgtcaatatgaatataggaaatgcta 133
||| ||||||||||||||| |||||| ||| || |||| |||||| ||| ||||||||
Sbjct: 71 ctag-atagatatatatgtc-tagattcatt-aatatcaacatgaatttagaaaatgcta 127
Query: 134 gaatgacttacattgtgaaacggggggagtat 165
||||||||||||||||||||||| ||||||||
Sbjct: 128 gaatgacttacattgtgaaacggagggagtat 159
Score = 73.8 bits (37), Expect = 7e-13
Identities = 126/151 (83%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| |||| | | ||| || |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagc-attttctaaattcatgttgatatt 100
Query: 67 aatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| ||||||| ||| ||| ||||||||||| | |
Sbjct: 99 aatgaatctagacatatatatctat---ctagattcatt-aacatcaatatgaatgtgag 44
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
||||| |||||||||||||||||||||||||
Sbjct: 43 aaatggtagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 140/161 (86%), Gaps = 6/161 (3%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
||||||||||||||||||||||||||||||| | | ||||||||| ||||||| |||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcatttttg-catttcccacatttatattgatg 61
Query: 65 ttaatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatata 123
|||||||||||| |||| |||| ||| ||||||| ||| || ||||||||||| |
Sbjct: 62 ttaatgaatctagacatatatatctat---ctagattcatt-aatatcaatatgaatgtg 117
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||||||| |||| |||||||
Sbjct: 118 ggaaatgctagaatgacttacattgtgatacggagggagta 158
Score = 107 bits (54), Expect = 5e-23
Identities = 130/150 (86%), Gaps = 4/150 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||| |||||||||||||||| |||| |||||||| ||| ||| |||| ||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagc-atttcccacattcatattgatatt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||||||||||||||| |||||| ||| ||| ||||||| ||| | |||
Sbjct: 99 aatgaatctag-atagatatatatgtc-tagattcatt-aacatcaatataaatgtggga 43
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||||| | ||||||||||||||||||||||
Sbjct: 42 aatgcaaaaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 139/159 (87%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||||||||||||||||||||||||||||| |||| ||| |||||||| ||| |||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagc-attacccatattcatatggatgt 62
Query: 66 taatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
||||||||||| | |||||||||||| |||||| ||| ||| | ||||||||| | |
Sbjct: 63 taatgaatctagt-tggatatatatgtc-tagattcatt-aacattaatatgaatgtgag 119
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||| |||||||
Sbjct: 120 aaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 85.7 bits (43), Expect = 2e-16
Identities = 128/153 (83%), Gaps = 10/153 (6%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| ||||| || ||| ||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagc-atttctcacattcatattaatgtt 100
Query: 67 aatgaatctatcatagatatatatgtcc---tagatttattnaacgtcaatatgaatata 123
|||||||||| || |||||| ||| |||||| ||| ||| || ||||||||||
Sbjct: 99 aatgaatcta-----gacatatatatccaactagattcatt-aacatccatatgaatatg 46
Query: 124 ggaaatgctagaatgacttacattgtgaaacgg 156
|| ||||||||||||||||||||||||||||||
Sbjct: 45 ggtaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 139/159 (87%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| |||| |||||| ||||| ||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagc-atttcctatattcatattgatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||||||||| ||||| || ||| ||| ||| ||||||||||| | |
Sbjct: 64 aatgaatctag-atagatatagatgtc-tatattcatt-aacatcaatatgaatgcggaa 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 tatgctagaatgacttacattgtgaaacggagggagtat 159
Score = 97.6 bits (49), Expect = 5e-20
Identities = 129/151 (85%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| || | || ||| ||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagc-atattccgcattcatattgatgtt 100
Query: 67 aatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
||||||| || ||| |||| ||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 99 aatgaatatagacatctatatctat---ctagattcatt-aacatcaatatgaatatagg 44
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 139/159 (87%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||||||||||||||||||||||||||||| |||| |||||||| ||| ||| | |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagc-atttcccacattcatattagtgt 62
Query: 66 taatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
||||||||||| ||||||||||||||| |||||| ||| ||| | ||||||||| | |
Sbjct: 63 taatgaatctag-atagatatatatgtc-tagattcatt-aacattaatatgaatgtgga 119
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||||||||| |||||||
Sbjct: 120 gaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 7e-13
Identities = 126/151 (83%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| ||| ||| ||| ||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagc-attctccacattcatattaatgtt 100
Query: 67 aatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| ||||||| ||| ||| ||||||||| | ||
Sbjct: 99 aatgaatctagacatatatatctat---ctagattcatt-aacactaatatgaatgtggg 44
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||| ||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 132/150 (88%), Gaps = 4/150 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| |||||||| ||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagc-atttcccacattcatattgatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||||||||||||||| || ||| ||| ||| ||||||||||| | |||
Sbjct: 64 aatgaatctag-atagatatatatgtc-tacattcatt-aacatcaatatgaatgtggga 120
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||| |||||||||||||||||||||||||
Sbjct: 121 aatattagaatgacttacattgtgaaacgg 150
Score = 113 bits (57), Expect = 8e-25
Identities = 137/159 (86%), Gaps = 6/159 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| || |||||||| ||| ||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaat-atttcccacattcatattgatgtt 100
Query: 67 aatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
||||||| || |||| |||| ||| ||||||| ||| ||| ||||||||||| | ||
Sbjct: 99 aatgaatgtagacatatatatctat---ctagattcatt-aacatcaatatgaatgtggg 44
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||| |||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 138/158 (87%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| || | |||| ||| ||| ||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaac-attttccacattcatattgatatt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||||||||||||||| |||||| ||| ||| ||| ||||||| | |||
Sbjct: 99 aatgaatctaa-atagatatatatgtc-tagattcatt-aacatcactatgaatgtggga 43
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||||||||| |||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 135/159 (84%), Gaps = 6/159 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||||||| ||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag-catttcccacattcatagtgatgtt 63
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| |||||| ||| || ||||||||||| | |
Sbjct: 64 aatgaatctagacatatatatctat---ttagattcatt-aatatcaatatgaatgtgga 119
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
||||| ||||||||||||||||||||||||| |||||||
Sbjct: 120 aaatgttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 117 bits (59), Expect = 5e-26
Identities = 138/161 (85%), Gaps = 10/161 (6%)
Strand = Plus / Plus
Query: 4 ttgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgat 63
|||||||||||||||||||||||||||||||| |||| |||||||| ||| ||| ||||
Sbjct: 2 ttgtacttcctccgtttcacaatgtaagtcattctagc-atttcccacattcatattgat 60
Query: 64 gttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatata 123
| ||||||||||| ||||||||| |||||| ||| | | ||||||||||| ||
Sbjct: 61 gctaatgaatctag-------atatatgtc-tagattcatt-agcatcaatatgaatgta 111
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||| |||||||||||| |||||||
Sbjct: 112 ggaaatgctagaatgacttatattgtgaaacggagggagta 152
Score = 79.8 bits (40), Expect = 1e-14
Identities = 125/150 (83%), Gaps = 10/150 (6%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||||||| |||||||| |||| |||||| | ||| ||| ||||| |
Sbjct: 152 tactccctccgtttcacaatataagtcattctagc-atttcctacattcatattgatgct 94
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| || |||||| ||||||| ||| | | ||||||||||| | |||
Sbjct: 93 aatgaatcta-----gacatatat---ctagattcatt-agcatcaatatgaatgtggga 43
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||||||||||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 137/158 (86%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||||| |||| ||| ||| ||| | || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagc-attttccacattcatatttatatt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||| ||| || | || ||||||||||| |||||| ||| ||| ||||||||||| | |||
Sbjct: 64 aataaatttagc-taaatatatatgtc-tagattcatt-aacatcaatatgaatgtggga 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||||||||| |||||||
Sbjct: 121 aatgctagaatgacttacattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 135/160 (84%), Gaps = 6/160 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||||||| ||| ||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctag-catttcccacattcatattgatgtt 100
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| || ||| ||||||| || | ||||||||| | |
Sbjct: 99 aatgaatctagacatatatattta---gctaaatttatt-aatataaatatgaatgtgga 44
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||| |||||||||||||||||||||| ||||||||
Sbjct: 43 aaatgctataatgacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 115 bits (58), Expect = 2e-25
Identities = 141/164 (85%), Gaps = 6/164 (3%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
|||||| |||||||| ||||||||||||||| |||| |||||||| ||| ||| |||||
Sbjct: 158 tgtactccctccgttccacaatgtaagtcattctagc-atttcccacattcatattgatg 100
Query: 65 ttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatag 124
|||||||||||| | |||||||||| ||| ||| ||| ||| ||||||||||| |||
Sbjct: 99 ttaatgaatctag---acatatatatgt-ctacattcatt-aacatcaatatgaatgtag 45
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagtatata 168
||||||||||||||||||||||||| ||||| || ||||||||
Sbjct: 44 aaaatgctagaatgacttacattgtggaacggaggaagtatata 1
Score = 103 bits (52), Expect = 8e-22
Identities = 135/158 (85%), Gaps = 6/158 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||| ||||||||||||||| |||| |||| | | ||| ||| |||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagc-attttctacattcatattgatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||||||| || | ||||||||||| |||||| ||| ||| ||||||||||| | |||
Sbjct: 64 aatgaatgtag---acatatatatgtc-tagattcatt-aacatcaatatgaatgtggga 118
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||| ||||| |||||||
Sbjct: 119 aatgctagaatgacttacattgtggaacggagggagta 156
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 139/161 (86%), Gaps = 4/161 (2%)
Strand = Plus / Plus
Query: 4 ttgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgat 63
|||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| |||
Sbjct: 2 ttgtacttcctccgtttcacaatgtaagtcattctag-catttcccacattcatattgac 60
Query: 64 gttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatata 123
||||||||||||| |||||||||||| | ||||||| ||| | | ||||||| ||| |
Sbjct: 61 gttaatgaatcta-gatagatatatat-ttctagattcatt-accatcaatattaatgtg 117
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||| ||| ||||||||| |||||||||||| |||||||
Sbjct: 118 ggaaattctaaaatgacttagattgtgaaacggagggagta 158
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/150 (86%), Gaps = 4/150 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||||||| |||||||| ||| |||||||| ||| ||| ||||| |
Sbjct: 158 tactccctccgtttcacaatctaagtcattttaga-atttcccacattaatattgatggt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| | | |||||| | || |||||| ||| ||||||||||||||| | |||
Sbjct: 99 aatgaatctagaa-atatatatctatc-tagattcatt-aacgtcaatatgaatgtggga 43
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||||||||||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 111 bits (56), Expect = 3e-24
Identities = 134/158 (84%), Gaps = 14/158 (8%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| |||| |||||||| ||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagc-atttcccacatttatattaatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| || |||||| ||| ||| ||| ||||||||||| | |||
Sbjct: 64 aatgaatcta-----gacatatat-------attcatt-aacatcaatatgaatgtggga 110
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||||||||||
Sbjct: 111 aatgctagaatgacttacattgtgaaacggggggagta 148
Score = 81.8 bits (41), Expect = 3e-15
Identities = 134/163 (82%), Gaps = 14/163 (8%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| || ||||||||||||||||||||| |||| |||||||| ||| ||| ||||||
Sbjct: 149 gtactccccccgtttcacaatgtaagtcattctagc-atttcccacattcatattgatgt 91
Query: 66 taatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||| ||||||||| |||||| ||| ||| | ||||| ||| | ||
Sbjct: 90 taatgaat-----------atatatgtc-tagattcatt-aacattaatataaatgtggg 44
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtatata 168
||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtatata 1
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 139/159 (87%), Gaps = 6/159 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttata-atgatgt 65
||||||||||||||||||||||||||||| |||| ||||| || ||| ||| || | ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagc-atttctcacattcatatatta-gt 101
Query: 66 taatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
||||||||||| ||||||||||||||| |||||| ||| || ||||||||||| | ||
Sbjct: 100 taatgaatctag-atagatatatatgtc-tagattcatt-aatatcaatatgaatgtggg 44
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
||||| ||||||||||||||||||||||||| |||||||
Sbjct: 43 aaatgatagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 134/161 (83%), Gaps = 6/161 (3%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||||||| || | |||||||| ||| ||| |||| |
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctatc-atttcccacattcatattgatat 62
Query: 66 taatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatag 124
||||||||||| |||| |||| ||| ||||||| ||| ||| |||||||| |
Sbjct: 63 taatgaatctagacatatatatctat---ctagattcatt-aactaatatatgaatgtga 118
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||||||||||||||||||||||||||| || |||||
Sbjct: 119 gaaatgctagaatgacttacattgtgaaacggaggaagtat 159
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 137/159 (86%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||||||||||||||||||| |||||||| |||| ||||| || ||| ||| ||||
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagc-atttctcacattcatattgatac 62
Query: 66 taatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
||||||||||| ||||||||||||||| |||||| ||| | | ||||||||||| | |
Sbjct: 63 taatgaatctag-atagatatatatgtc-tagattcatt-agcatcaatatgaatgtggt 119
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
||||| ||||||||||||||||||||||||| |||||||
Sbjct: 120 aaatgttagaatgacttacattgtgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 125/151 (82%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| || | |||| ||| ||| ||| ||||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaac-atttaccacattcatattgatgct 100
Query: 67 aatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| ||||||| ||| | ||||||||||| | |
Sbjct: 99 aatgaatctagacatatatatctat---ctagattcatt-agtatcaatatgaatgtgag 44
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||| ||||||||||||
Sbjct: 43 aaatgctagaatgacttatattgtgaaacgg 13
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 130/150 (86%), Gaps = 4/150 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| |||||||| ||| ||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagc-atttcccacattcatattgttgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||||||||||||||| |||||| ||| | | ||||||||||| | |||
Sbjct: 64 aatgaatctag-atagatatatatgtc-tagattcatt-accatcaatatgaatgtggga 120
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
|||| | |||||||||||||| ||||||||
Sbjct: 121 aatggtggaatgacttacattatgaaacgg 150
Score = 93.7 bits (47), Expect = 7e-19
Identities = 130/153 (84%), Gaps = 6/153 (3%)
Strand = Plus / Minus
Query: 14 tccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgttaatgaat 73
||||||||| |||||||||||| | |||||||||| ||| ||| ||||| ||||||||
Sbjct: 151 tccgtttcataatgtaagtcattcca-ccatttcccacattcatattgatggtaatgaat 93
Query: 74 ctat-catagatatatatgtcctagatttattnaacgtcaatatgaatataggaaatgct 132
||| |||| |||| ||| ||||||| ||| ||| |||||||||| | |||||||||
Sbjct: 92 ctagacatatatatctat---ctagattcatt-aacaacaatatgaatgtgggaaatgct 37
Query: 133 agaatgacttacattgtgaaacggggggagtat 165
|||||||||||||||||||||||| ||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 136/158 (86%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| |||| || ||| ||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagt-atttttcacattcatattgatttt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||||||||||||||| |||||| ||| || ||||||||||| | |||
Sbjct: 99 aatgaatctag-atagatatatatgtc-tagattcatt-aatatcaatatgaatgtggga 43
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||| ||||||||||||||||||||||||| |||||||
Sbjct: 42 aatgttagaatgacttacattgtgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 134/160 (83%), Gaps = 6/160 (3%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||||||| || ||||||||| ||| ||| |||| |
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattcta-acatttcccacattcatattgatat 62
Query: 66 taatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatag 124
||||||||||| |||| |||| ||| ||||||| ||| || ||||||||||| |
Sbjct: 63 taatgaatctagacatatatatctat---ctagattcattaaa-atcaatatgaatgtga 118
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagta 164
|||| |||||||||||||||||||||||||| |||||||
Sbjct: 119 aaaatactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 135/157 (85%), Gaps = 4/157 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| |||| |||||| ||||| ||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagc-atttcctatattcatatagaggtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
| ||||||||| ||||||||||||||| |||||| | | ||| || |||||||| | |||
Sbjct: 64 agtgaatctat-atagatatatatgtc-tagattcact-aacctccatatgaatgtggga 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagt 163
||||||||||||||||||||| |||||||| ||||||
Sbjct: 121 aatgctagaatgacttacattatgaaacggagggagt 157
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 56 atatgaatataggaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 138/161 (85%), Gaps = 4/161 (2%)
Strand = Plus / Minus
Query: 4 ttgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgat 63
||||||| |||||||| |||||| |||||||| |||| |||| || ||| ||| ||||
Sbjct: 161 ttgtactccctccgttccacaatataagtcattctagc-atttttcacattcatattgat 103
Query: 64 gttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatata 123
|||||||||||| ||||||||||||||| |||||| ||| ||| |||||| ||| |
Sbjct: 102 attaatgaatctaa-atagatatatatgtc-tagattcatt-aacaccaatataaatgtg 46
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 133/159 (83%), Gaps = 6/159 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||||||| ||||||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag-catttcccacatttatattggtgtt 63
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| |||||| ||| || ||||||||||| |
Sbjct: 64 aatgaatctagacatatatatctat---ttagattcatt-aatatcaatatgaatgtgaa 119
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||| |||||| ||||| |||||||
Sbjct: 120 aaatgctagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 137/160 (85%), Gaps = 4/160 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||||||| |||||||| |||| |||||||| ||| ||| | |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagc-atttcccacattcatatttatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||||||||||||||| |||||| ||| | | ||||||| ||| | |
Sbjct: 64 aatgaatctag-atagatatatatgtc-tagattcatt-atcatcaatataaatgtgaaa 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtata 166
|||||||||||| |||| |||||||||||| |||||||||
Sbjct: 121 aatgctagaatggcttatattgtgaaacggagggagtata 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 125/151 (82%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||||||| |||| ||| |||| |||| || ||||||| ||||| |
Sbjct: 158 tactccctccgtttcacaatataagccattctagc-atttttcacatttatattgatgat 100
Query: 67 aatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| ||||||| ||| ||| | ||||||||| | ||
Sbjct: 99 aatgaatctagacatatatatctat---ctagattcatt-aacataaatatgaatgtggg 44
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||| ||||||||| ||||||||||||
Sbjct: 43 aaatgctacaatgacttatattgtgaaacgg 13
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 101 bits (51), Expect = 3e-21
Identities = 133/158 (84%), Gaps = 13/158 (8%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| |||| |||||||| ||| ||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagc-atttcccacattcatattgatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| || || ||||||| ||| ||| ||||||||||| | |||
Sbjct: 64 aatgaatcta-----gacatt------ctagattcatt-aacatcaatatgaatgtggga 111
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||||||||| |||||||
Sbjct: 112 aatgctagaatgacttacattgtgaaacggagggagta 149
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/150 (84%), Gaps = 13/150 (8%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| |||||||| ||| ||| |||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagc-atttcccacattcatattgatgtt 91
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| || ||||| |||||| ||| ||| ||||||||||| | |||
Sbjct: 90 aatgaatcta-----ga-----atgtc-tagattcatt-aacatcaatatgaatgtggga 43
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||||||||||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 101 bits (51), Expect = 3e-21
Identities = 138/162 (85%), Gaps = 5/162 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||| ||||||||||| || ||| ||||||| ||| ||| |||| ||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt--tttcccacattcatattgatatt 62
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||||||||||||||| |||||| ||| ||| ||||||||||| | | |
Sbjct: 63 aatgaatctag-atagatatatatgtc-tagattcatt-aacatcaatatgaatgtggaa 119
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtatata 168
||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 120 aatattagaatgacttacattgtgaaacggagggagtatata 161
Score = 60.0 bits (30), Expect = 1e-08
Identities = 132/160 (82%), Gaps = 7/160 (4%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| || |||| ||| ||| ||| |||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattcta-atattttccacattcatattgatgtt 99
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| ||||||| ||| || ||||||||||| | ||
Sbjct: 98 aatgaatctagacatatatatctat---ctagattcatt-aatatcaatatgaatgtggg 43
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtat 165
||| ||||||| ||||||||||| |||||| ||||||||
Sbjct: 42 aaa-actagaataacttacattgtaaaacggagggagtat 4
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 135/158 (85%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| |||| |||||||| ||| ||| | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagc-atttcccacattcatacttatatt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| | ||||||||||| ||||||| ||| | | |||||||| || | ||
Sbjct: 64 aatgaatctag-acggatatatatgt-ctagattcatt-agcatcaatatggatgtgaga 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
||||||| |||||||||||||||||||||| |||||||
Sbjct: 121 aatgctaaaatgacttacattgtgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 114 tatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtata 166
||||||| | ||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 55 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtata 3
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 99.6 bits (50), Expect = 1e-20
Identities = 136/158 (86%), Gaps = 5/158 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||| ||||||||||||| |||| ||||| || ||| ||| ||||| |
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagc-atttctcacattcatattgatggt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||||| |||||| || |||||| ||| ||| | ||||| ||||| |||
Sbjct: 64 aatgaatctag-ataga-atatatatc-tagattcatt-aacattaatataaatatggga 119
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||| ||||||||||||||||||||||||| |||||||
Sbjct: 120 aatgttagaatgacttacattgtgaaacggagggagta 157
Score = 87.7 bits (44), Expect = 5e-17
Identities = 136/162 (83%), Gaps = 11/162 (6%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| || | |||||||||||||||| | |||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaac-atttcccatatttatattaatgtt 99
Query: 67 aatgaatctatcatagatatatatgtc---ctagatttattnaacgtcaatatgaatata 123
|||||||| ||||||||||| || ||||||| ||| | | ||||||||||| |
Sbjct: 98 aatgaatc-----tagatatatat-tctatctagattcatt-accatcaatatgaatgtg 46
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||||||||||||||||||| ||||||| || |||||
Sbjct: 45 agaaatgctagaatgacttacattgcgaaacggaggaagtat 4
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 134/158 (84%), Gaps = 6/158 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||||||| |||||||| |||| |||||||| |||||| |||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagc-atttcccacgtttatattgatgtt 98
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||||||||| | |||| | || |||||| ||| ||| ||||||||||| | |||
Sbjct: 97 aatgaatctgg---acatatgcctatc-tagattcatt-aacatcaatatgaatgtggga 43
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||||||||| |||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 138/162 (85%), Gaps = 6/162 (3%)
Strand = Plus / Plus
Query: 4 ttgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgat 63
||||||| |||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||
Sbjct: 2 ttgtactccctccgtttcacaatgtaagtcattctag-catttcccacattcatattgat 60
Query: 64 gttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatata 123
||||||||||||| |||| |||||||| ||||| ||| ||| ||||||| || |
Sbjct: 61 gttaatgaatcta-gatag--gcatatgtcc-agattcatt-aacatcaatataaacgtg 115
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||||||||||||||| |||||||||||| || |||||
Sbjct: 116 ggaaatgctagaatgacttatattgtgaaacggaggaagtat 157
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 85 tcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagta 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||||||| |||| |||||||||||| ||| ||||||
Sbjct: 140 gtactccctccgtttcacaatgtaagtcattctagc-atttcccatattcatattgatgt 82
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 81 taatgaatcta 71
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 115 atgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||| |||||||||||||||||||||||| |||||||| || |||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 4
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 135/159 (84%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| |||| | || ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcac-tagaaatattgatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||||||||||||||| |||||| ||| || ||||||||||| | |||
Sbjct: 64 aatgaatctag-atagatatatatgtc-tagattcatt-aatatcaatatgaatgtggga 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtat 165
||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 121 aatactagaatgtcttacattgtgaaacggagggagtat 159
Score = 65.9 bits (33), Expect = 2e-10
Identities = 131/159 (82%), Gaps = 6/159 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||| ||| ||| |||||||| ||| ||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagt-atttcccacattcatattgatatt 100
Query: 67 aatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||| |||| ||| ||||||| ||| ||| ||||||| || |
Sbjct: 99 aatgaatctagacatatatatctat---ctagattcatt-aacatcaatatttctagtga 44
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||| |||||||||||||||||||||||||| |||||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 tcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||||||| |||| |||||||||||| ||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagc-atttcccatattcatattgatgt 62
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 115 atgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||| |||||||||||||||||||||||| |||||||| || |||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 140
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 tcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||||||| |||| |||||||||||| ||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagc-atttcccatattcatattgatgt 62
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||||| |||| |||||||||||| ||| |||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagc-atttcccatattcatattgatgtt 82
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 81 aatgaatcta 72
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||||| |||||||||||||||||||||||| |||||||| || |||||
Sbjct: 86 tcaatatgaatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 141
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 tcaatatgaatatagaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||||||| ||| ||||| | ||||| ||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctag-cattttctatattcatattgatgt 62
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatata 168
||||||||||| |||||||| |||||||||||| |||||||||||| || ||||||||
Sbjct: 84 tcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaagtatata 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||| ||||||||
Sbjct: 138 tacttcctccgtttcacaatataagtcat 110
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 134/158 (84%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||||||| |||||||| || | ||||| | ||| ||| | |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttcc-acattcatattaatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||| |||||||| || |||||| ||| || ||||||||||| | |||
Sbjct: 64 aatgaatctag-ataaatatatatatc-tagattcatt-aatatcaatatgaatgtggga 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||| |||||||||||| |||||||
Sbjct: 121 aatgctagaatgacttatattgtgaaacggagggagta 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 127/152 (83%), Gaps = 4/152 (2%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
|||||| ||||||||||||||| |||||||| ||| ||||||||| ||| ||| ||||
Sbjct: 160 tgtactccctccgtttcacaatataagtcattctag-catttcccacattcatattgata 102
Query: 65 ttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatag 124
|||||||||||| ||| |||||| | | ||||||| ||| ||| | ||||||||| | |
Sbjct: 101 ttaatgaatcta-gatatatatatttat-ctagattcatt-aacattaatatgaatgtgg 45
Query: 125 gaaatgctagaatgacttacattgtgaaacgg 156
||| | |||||||||||| ||||||||||||
Sbjct: 44 aaaaagttagaatgacttatattgtgaaacgg 13
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 91.7 bits (46), Expect = 3e-18
Identities = 135/159 (84%), Gaps = 13/159 (8%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||||||||| ||||||||||||||||| || |||| |||||||| ||| |||||
Sbjct: 4 gtacttcctctgtttcacaatgtaagtcttc-tagc-atttcccacatt------gatgt 55
Query: 66 taatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
||||||||||| |||||||||| | ||||||| ||| ||| ||||||||||||| ||
Sbjct: 56 taatgaatctag-atagatatatgt---ctagattcatt-aacatcaatatgaatatggg 110
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| ||||||||| |||||||||||| |||||||
Sbjct: 111 aaatgctaaaatgacttatattgtgaaacggagggagta 149
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||||||| |||||||| |||| |||||||||||| ||| |||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagc-atttcccatattcatattgatgtt 91
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 90 aatgaatcta 81
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 91.7 bits (46), Expect = 3e-18
Identities = 78/86 (90%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 79 atagatatatatgtcctagatttattnaacgtcaatatgaatataggaaatgctagaatg 138
||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||||||||||
Sbjct: 88 atagatatatatgtc-tagattcatt-aacatcaatatgaatatgagaaatgctagaatg 31
Query: 139 acttacattgtgaaacggggggagta 164
||||||||| |||||||| |||||||
Sbjct: 30 acttacattatgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
|||||| ||||||||||| |||||||||||| ||| |||||| |||||| ||| |||||
Sbjct: 3 tgtactccctccgtttcataatgtaagtcattctag-catttctcatattcatattgatg 61
Query: 65 ttaatgaatcta 76
||||||||||||
Sbjct: 62 ttaatgaatcta 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 114 tatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||| | |||||||||||||||||||||||||| ||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacgg 137
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 134/158 (84%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||||| |||| || | || ||| ||| ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatg-ctcacattcatatggatgtt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||| || | |||||| |||||| ||| ||| || |||||||||||||
Sbjct: 99 aatgaatctag-atatatgtctatgtc-tagattcatt-aacatctatatgaatataggc 43
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||| |||||||| |||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 125/151 (82%), Gaps = 6/151 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| ||| |||| || ||||| ||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctag-cattgcctatattcatatagatgtt 63
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| |||||| |||||| ||||||| ||| ||| || |||||||| | |
Sbjct: 64 aatgaatctagacatagacatatat---ctagattcatt-aacatccatatgaatgtgag 119
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
| ||||||||||||||||||| ||||||||
Sbjct: 120 cattgctagaatgacttacattatgaaacgg 150
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 136/160 (85%), Gaps = 6/160 (3%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||||||||||||||||||||||| ||||| |||| ||| ||| ||| ||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtatgtcattctagc-attgtccacattcatatagatgc 62
Query: 66 taatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatag 124
||||||||||| |||| |||||| ||| |||||| ||| ||| ||||||||||| | |
Sbjct: 63 taatgaatctaggcata--tatataagtc-tagattcatt-aacatcaatatgaatgtgg 118
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||| |||||||
Sbjct: 119 aaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/150 (84%), Gaps = 4/150 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||| ||| ||| ||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctag-cattttccacattcatattgatgtt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| | ||||||||| |||||||| ||| | | || |||||||| | |
Sbjct: 99 aatgaatcta-gacttatatatatg-cctagattcatt-agcatctatatgaatgtggac 43
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
|||||||||||||| |||||||||||||||
Sbjct: 42 aatgctagaatgacatacattgtgaaacgg 13
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 89.7 bits (45), Expect = 1e-17
Identities = 90/101 (89%), Gaps = 3/101 (2%)
Strand = Plus / Minus
Query: 42 catttcccatatttataatgatgttaatgaatctatcatagatatatatgtcctagattt 101
||||||||| ||| ||| ||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 98 catttcccacattcatattgatgttaatgaatctaa-atagatatatatgtc-tagattc 41
Query: 102 attnaacgtcaatatgaatataggaaatgctagaatgactt 142
||| ||| ||||||||||| | |||||||||||||||||||
Sbjct: 40 att-aacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 86/102 (84%), Gaps = 5/102 (4%)
Strand = Plus / Plus
Query: 42 catttcccatatttataatgatgttaatgaatctat-catagatatatatgtcctagatt 100
||||||||| ||| ||| ||||||||||||||||| |||| |||| ||| | |||||
Sbjct: 13 catttcccacattcatattgatgttaatgaatctagacatatatatctattt---agatt 69
Query: 101 tattnaacgtcaatatgaatataggaaatgctagaatgactt 142
||| ||| ||||||||||| | |||||||||||||||||||
Sbjct: 70 catt-aacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 88 tcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtat 143
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | |||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 tcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||||||||| ||| ||||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctag-catttcccatattcatattgatgtc 84
Query: 67 aatg 70
||||
Sbjct: 83 aatg 80
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||||||| ||| |||||| || ||| ||| |||| |
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctag-catttctcacattcatattgatat 62
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||| | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 91 tcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 145
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||| ||||||| ||| |||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctag-cattttccatattcatattgatgtt 87
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 86 aatgaatcta 77
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 94 ctagatttattnaacgtcaatatgaatataggaaatgctagaatgacttacattgtgaaa 153
||||||||||| ||| ||||||| ||| | ||||||||||||||||||||||| |||||
Sbjct: 74 ctagatttatt-aacatcaatataaatgtgagaaatgctagaatgacttacattatgaaa 16
Query: 154 cgg 156
|||
Sbjct: 15 cgg 13
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 83 tcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgg 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgat 63
||||||||||||||||||||||||||||| ||| ||||||||||||| ||| ||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctag-catttcccatattcatattgat 82
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||| | ||||||||| ||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 65 aatgaatcta 74
Score = 48.1 bits (24), Expect = 4e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatg-acttacattgtgaaacggggggagta 164
||||||||||| | ||||||| |||| | |||||||||||||||||| |||||||
Sbjct: 60 tcaatatgaatgtgggaaatgttagaggggacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 69 tcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggagggagta 123
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||||||||||||||||||||||| || |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| ||| ||||||| | ||| ||| |||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctag-catttcctacattcatattgatgtt 65
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 55
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatat 167
||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggagtatat 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtatat 167
||||||||||||||||||||| ||||| || || |||||||
Sbjct: 95 aatgctagaatgacttacattatgaaatggaggaagtatat 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||| ||||| |||||||||||| ||| |||| | || ||| ||| ||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctag-cattgcacacattcatatagatgtt 74
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 73 aatgaatcta 64
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatata 168
||||||| ||||| | ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 92 tcaatataaatatggaaaatgctagaatgacttacattgtgaaacggagggagtatata 150
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||| ||||||||||| |||| ||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctag-cattttccatatttatattgatatt 88
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 87 aatgaatcta 78
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||| |||||||||||||||||||||| ||| |||||| || ||| ||| |||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctag-catttctcacattcatattgatgtt 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | |||||||||||||||||||||||| |||||||| |||||||
Sbjct: 84 tcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 138
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag-catttcccacattcatattgatgct 63
Query: 67 aatgaatc 74
||||||||
Sbjct: 64 aatgaatc 71
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| ||| ||||||||| ||| ||| ||||| |
Sbjct: 138 tactccctccgtttcataatgtaagtcattctag-catttcccacattcatattgatgct 80
Query: 67 aatgaatc 74
||||||||
Sbjct: 79 aatgaatc 72
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 94 ctagatttattnaacgtcaatatgaatataggaaatgctagaatgacttacattgtgaaa 153
||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 76 ctagatttatt-aacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 154 cggggggagta 164
||| |||||||
Sbjct: 135 cggagggagta 145
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| |||||| |||||||||| |||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctag-catttctcatatttatattgatgtt 87
Query: 67 aatgaatcta 76
||| ||||||
Sbjct: 86 aataaatcta 77
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | |||||||||| ||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctag-catttcccacattcatattgatgt 62
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 139 acttacattgtgaaacggggggagtat 165
|||||||||||||||||| ||||||||
Sbjct: 82 acttacattgtgaaacggagggagtat 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagt 32
|||| |||||||||||||||||||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 60 tcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacgg 106
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 115 atgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||| | ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||| | ||| ||| |||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctag-catttcctacattcatattgatgtt 56
Query: 67 aatgaat 73
|||||||
Sbjct: 55 aatgaat 49
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||| ||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatata 168
||||||||||| | |||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtatata 1
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaa 153
||||||||||| | |||||||||||||||||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | ||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 82 tcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggagggagta 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgat 63
|||||||||||||||||||||||||||||| ||| ||||||||||||| ||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctag-catttcccatattcatattgat 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| || ||||||||| ||| ||| |||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattcta-acatttcccacattcatattgatgtt 78
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 77 aatgaatcta 68
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| |||||| |||||||||| ||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttag-catttctcatatttatattgatgct 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||| ||||| ||||||||| |||||||||||||||||||||| || |||||
Sbjct: 59 tcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggaggaagtat 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||| | | |||||||| ||||||||| |||||||||||| ||||||||
Sbjct: 85 tcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagtat 140
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatat 167
||||||||||| | | ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtatat 2
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtata 166
||||||||||| | ||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 92 tcaatatgaatgtgggaaatgctagaatgacttacattgtggaacggaggaagtata 148
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||| ||| ||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag-cattttccacattcatattgatgtt 63
Query: 67 aatgaatcta 76
|||| |||||
Sbjct: 64 aatgtatcta 73
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| ||||| ||||||||||| |||| ||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatag-cattttccatatttatattgatatt 88
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 87 aatgaatcta 78
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatata 168
||||||| ||||| | |||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 92 tcaatataaatatggaaaatgctataatgacttacattgtgaaacggagggagtatata 150
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||| |||||||||||||||||||||| ||| |||||| || ||| ||| |||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctag-catttctcacattcatattgatgtt 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 133/158 (84%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||||| |||| || | || ||| ||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatg-ctcacattcatatggatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||| || | ||| || |||||| ||| ||| || |||||||||||||
Sbjct: 64 aatgaatctag-atatatgtctatatc-tagattcatt-aacatctatatgaatataggc 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||| |||||||| |||||||
Sbjct: 121 aatgctagaatgacttacattatgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 124/151 (82%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| ||| |||| || ||||| ||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctag-cattgcctatattcatatagatgtt 100
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| ||||| |||||| ||||||| ||| ||| || |||||||| | |
Sbjct: 99 aatgaatctagatatagacatatat---ctagattcatt-aacatccatatgaatgtgag 44
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
| ||||||||||||||||||| ||||||||
Sbjct: 43 cattgctagaatgacttacattatgaaacgg 13
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 133/158 (84%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctag-catttcccacattcatatagatgtt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||||||||| ||| ||||| |||| ||||||| ||| ||| || |||||||| | ||
Sbjct: 99 gatgaatcta-aatatatatagatgt-ctagattcatt-aacatctatatgaatgtgaga 43
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||| || ||||||||||| |||||||||| |||||||
Sbjct: 42 aatgataaaatgacttacaatgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||| | ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 107 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||| ||||||||||||||| ||||| |||||||||||||||| ||||| |
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagc-atttcccatatttatattgatgct 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||| ||||| |||||||||| |||||||||||||||| ||||| ||||||||
Sbjct: 59 tcaatataaatatgggaaatgctataatgacttacattgtggaacggagggagtat 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | ||||||||||||||| |||||||||||||||||
Sbjct: 78 tcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacgg 124
Score = 54.0 bits (27), Expect = 6e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||||||||||||||||||||||| ||| ||| ||||||||| ||| ||| ||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctag-catttcccacattcatattgatgt 75
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 56 atatgaatatagaaaatgttagaatgacttacattgtgaaacggagggagtat 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||| | | ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 107 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtata 166
||||||||||| | ||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtata 3
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | |||||||||||||||||||||||| |||||||| |||||||
Sbjct: 81 tcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag-catttcccacattcatattgatgtc 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| ||| ||||||||| ||| ||| |||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctag-catttcccacattcatattgatgtt 77
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 81.8 bits (41), Expect = 3e-15
Identities = 67/73 (91%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 84 tatatatgtcctagatttattnaacgtcaatatgaatataggaaatgctagaatgactta 143
|||||||||| |||||| ||| ||| ||||||||||| | ||||||||||||||||||||
Sbjct: 83 tatatatgtc-tagattcatt-aacatcaatatgaatgtgggaaatgctagaatgactta 26
Query: 144 cattgtgaaacgg 156
|||||||||||||
Sbjct: 25 cattgtgaaacgg 13
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
|||||| |||||||||||||||||||||||| ||| ||||||||| ||| ||| |||||
Sbjct: 3 tgtactacctccgtttcacaatgtaagtcattctag-catttcccacattcatattgatg 61
Query: 65 ttaatgaatcta 76
||||||||||||
Sbjct: 62 ttaatgaatcta 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||||||||||||
Sbjct: 102 aaatgctagaatgacttacattgtgaaacgg 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||||
Sbjct: 142 tgtacttcctccgtttcacaatgtaagtcat 112
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 81.8 bits (41), Expect = 3e-15
Identities = 89/101 (88%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 42 catttcccatatttataatgatgttaatgaatctatcatagatatatatgtcctagattt 101
|||||| || ||| ||| ||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 13 catttctcacattcatattgatgttaatgaatctag-atagatatatatgtc-tagattc 70
Query: 102 attnaacgtcaatatgaatataggaaatgctagaatgactt 142
||| ||| ||||||||||| | |||||||||||||||||||
Sbjct: 71 att-aacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 56.0 bits (28), Expect = 2e-07
Identities = 86/102 (84%), Gaps = 5/102 (4%)
Strand = Plus / Minus
Query: 42 catttcccatatttataatgatgttaatgaatcta-tcatagatatatatgtcctagatt 100
||||||||| ||| ||| ||||||||||||||||| |||| |||| ||| |||||||
Sbjct: 98 catttcccacattcatattgatgttaatgaatctagacatatatatctat---ctagatt 42
Query: 101 tattnaacgtcaatatgaatataggaaatgctagaatgactt 142
||| ||| ||||||||||| | ||||||||||||||||||
Sbjct: 41 catt-aacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||||| | ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtat 131
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 111 caatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
|||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 58 caatatgaatgtgagaaatgctagaatgacttacattgtgaaacgg 13
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||||||||||||||||||||||||||||| ||| |||||| || ||| ||| || |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctag-catttctcacattcatattgctgt 62
Query: 66 taatgaat 73
||||||||
Sbjct: 63 taatgaat 70
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||| ||||||||||||||||||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcat 102
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 81.8 bits (41), Expect = 3e-15
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 4 ttgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgat 63
||||||||||||||||||||||| |||||||| ||| ||||| |||||||||| ||||
Sbjct: 2 ttgtacttcctccgtttcacaatataagtcattctag-tatttctcatatttatattgat 60
Query: 64 gttaatgaatctatcatagatatatatgt 92
| ||||||||||| ||||||||||||||
Sbjct: 61 gataatgaatcta-gatagatatatatgt 88
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacggagggagta 128
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||| ||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 59 tcaatataaatatgagaaatactagaatgacttatattgtgaaacgg 13
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcat 35
|||||| ||||||||||| ||||||||||||
Sbjct: 130 tgtactccctccgtttcataatgtaagtcat 100
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 81.8 bits (41), Expect = 3e-15
Identities = 131/158 (82%), Gaps = 10/158 (6%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| || | |||||||| ||| ||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatc-atttcccacattcatattgatgtc 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| | || |||| |||||| ||| | | ||||||||||| | |||
Sbjct: 64 aatgaatctag-------acatctgtc-tagattcattga-catcaatatgaatgtggga 114
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||| |||||||| |||||||
Sbjct: 115 aatgctagaatgacttacattatgaaacggagggagta 152
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtata 166
||||||||||| | ||||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 59 tcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggaggaagtata 3
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagtatata 168
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagtatata 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 109 ggaaatgctagaatgacttacattgtgaaacggagggagtat 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 124 ggaaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||||||||||||||
Sbjct: 66 ggaaatgctagaatgacttacattgtgaaacgg 98
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttata 58
|||| |||||||||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag-catttcccacatttata 55
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttata 58
|||| |||||||||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctag-catttcccacatttata 99
Score = 48.1 bits (24), Expect = 4e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 15 ccgtttcacaatgtaagtcatcatagccatttcccatatttata 58
||||||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctag-catttcccacatttata 56
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag-catttcccacattcatattgatgtt 63
Query: 67 aatgaatc 74
||||||||
Sbjct: 64 aatgaatc 71
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | ||||||||||||||| |||||||||||||||| |||||||
Sbjct: 87 tcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacggagggagta 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
|||||| ||||||||||||||||||| |||| ||| |||||| || ||| ||| |||||
Sbjct: 143 tgtactccctccgtttcacaatgtaattcattctag-catttctcacattcatattgatg 85
Query: 65 ttaatgaatc 74
||||||||||
Sbjct: 84 ttaatgaatc 75
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 79.8 bits (40), Expect = 1e-14
Identities = 125/150 (83%), Gaps = 10/150 (6%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| |||| |||| ||| ||| ||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagc-attttccacattcatatcgatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||||| | || ||||||| ||||||| ||||| || ||||||||||||| | |
Sbjct: 64 aatgagtttag-atagatacatatgtc-tagat-------acatcaatatgaatatggaa 114
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||||||||||||||||||||||||||||||
Sbjct: 115 aatgctagaatgacttacattgtgaaacgg 144
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| | | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||||||||||||||||||||||||||||| ||| ||||| ||||||| ||| ||||||
Sbjct: 153 gtacttcctccgtttcacaatgtaagtcattctag-cattttccatattcatattgatgt 95
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||| | ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||| | |||||||||||||||||||| |||||||||||| |||||||
Sbjct: 80 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcat 33
Score = 54.0 bits (27), Expect = 6e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| ||||||||||||||| |||||||| ||| ||||||||| ||| ||| | |||
Sbjct: 133 gtactccctccgtttcacaatataagtcattctag-catttcccacattcatattaatgc 75
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 74 taatgaatcta 64
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 134/160 (83%), Gaps = 4/160 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||||| |||| ||| |||| || ||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagc-attgcccacatacatatagatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||||||| || ||| | || | |||| |||||| ||| ||| || |||||||||| ||
Sbjct: 64 aatgaatttag-atatagatgtgtgtc-tagattcatt-aacatctatatgaatatgggt 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtata 166
||||||||||||||||||||| |||||||| |||||||||
Sbjct: 121 aatgctagaatgacttacattatgaaacggagggagtata 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| ||| |||| |||||||| ||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctag-cattacccatattcatatagatgtt 100
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| | ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| | ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag-catttcccacattcatatagatgtt 63
Query: 67 aatgaatctat 77
|||||||||||
Sbjct: 64 aatgaatctat 74
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||| ||||||||||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcat 96
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 94 ctagatttattnaacgtcaatatgaatataggaaatgctagaatgacttacattgtgaaa 153
|||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 75 ctagatttat-gaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 133
Query: 154 cgg 156
|||
Sbjct: 134 cgg 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | ||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| |||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctag-catttcccacattcatattgatgtt 86
Query: 67 aatgaatcta 76
|| ||||||
Sbjct: 85 cataaatcta 76
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||| ||| ||| ||||||||| ||| ||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagccattctag-catttcccacattcatattgatgt 62
Query: 66 taatgaat 73
| ||||||
Sbjct: 63 tcatgaat 70
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||| | ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 78 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 133
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||| | |||||||||||||||||||| |||||||||||| |||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcat 104
Score = 54.0 bits (27), Expect = 6e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| ||||||||||||||| |||||||| ||| ||||||||| ||| ||| | |||
Sbjct: 4 gtactccctccgtttcacaatataagtcattctag-catttcccacattcatattaatgc 62
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 79.8 bits (40), Expect = 1e-14
Identities = 125/150 (83%), Gaps = 10/150 (6%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||||| ||||| | ||| ||| |||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttcc-acattcatattgatgtt 94
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||||| | || ||||||| ||||||| ||||| || ||||||||||| | | |
Sbjct: 93 aatgagtttag-atagatacatatgtc-tagat-------acatcaatatgaatgtggaa 43
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||||||||||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacgg 13
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | | ||| ||||||||||||||||||||||||||| |||||||
Sbjct: 98 tcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggagggagta 152
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttag-catttcccacattcatattgatgtt 76
Query: 67 aatgaatc 74
||||||||
Sbjct: 75 aatgaatc 68
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | |||||||||| ||||||||||||||||||||||
Sbjct: 80 tcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgg 126
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | | |||||| | ||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacgg 13
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatgtaagtcat 35
||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 94 ctagatttattnaacgtcaatatgaatataggaaatgctagaatgacttacattgtgaaa 153
||||||||||| ||| ||||||||||||| |||||||||| |||||||| ||||||||||
Sbjct: 67 ctagatttatt-aacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaa 125
Query: 154 cggggggagtat 165
||| || |||||
Sbjct: 126 cggaggaagtat 137
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||| ||||||| ||| ||||||||||||| ||| |||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttag-catttcccatattcatattgatgtt 78
Query: 67 aatgaatcta 76
||| ||||||
Sbjct: 77 aataaatcta 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagt 32
|||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagt 30
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 124 ggaaatgctagaatgacttacattgtgaaacgg 156
|||||| ||||||| ||||||||||||||||||
Sbjct: 45 ggaaatactagaataacttacattgtgaaacgg 13
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| | ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||| | ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctag-catttcccacattcatatcgatgtt 72
Query: 67 aatga 71
|||||
Sbjct: 71 aatga 67
Score = 56.0 bits (28), Expect = 2e-07
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
|||||| |||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattctag-catttcccacattcatatcgatg 61
Query: 65 ttaa 68
||||
Sbjct: 62 ttaa 65
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 83 tcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggagta 137
Score = 73.8 bits (37), Expect = 7e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag-catttcccacattcatattgatggt 63
Query: 67 aatgaatct 75
|||||||||
Sbjct: 64 aatgaatct 72
Score = 58.0 bits (29), Expect = 4e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
|||||| |||||||||||||| ||||||||| ||| ||||||||| ||| ||| |||||
Sbjct: 139 tgtactccctccgtttcacaaagtaagtcattctag-catttcccacattcatattgatg 81
Query: 65 ttaat 69
|||||
Sbjct: 80 ttaat 76
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 72 tcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 126
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| ||| |||||| |||||| ||| |||| ||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctag-catttctcatattcatattgatatt 68
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 67 aatgaatcta 58
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||| ||||||||||||
Sbjct: 43 aaatgctagaatgacttatattgtgaaacgg 13
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcat 33
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 72 tcaatatgaatgttggaaatgctagaatgacttacattgtgaaacgg 118
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||| | ||| ||| |||| ||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctag-catttccaacattcatattgatatt 68
Query: 67 aatgaat 73
|||||||
Sbjct: 67 aatgaat 61
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||| ||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | ||||||||||||||||||||||||||||||| | |||||||
Sbjct: 92 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaccgagggagta 146
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||||| ||| ||||| ||| ||| ||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctag-cattttccacattcatattgatgtt 63
Query: 67 aatgaatctat 77
|||||||||||
Sbjct: 64 aatgaatctat 74
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | | |||||||||||||||||||||| ||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaatgacttacattatgaaacgg 13
Score = 60.0 bits (30), Expect = 1e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||| ||||||||||||||||||| ||| ||||||||| ||| ||| |||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctag-catttcccacattcatattgatgtt 88
Query: 67 aatgaa 72
||||||
Sbjct: 87 aatgaa 82
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| | ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 tcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||| ||||||||| |||||| |||||||
Sbjct: 67 ggaaatgctagaatgatttacattgtaaaacggagggagta 107
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||
Sbjct: 82 tcaatatgaatatgggaaatactagaatgacttacattatgaaacggagggagta 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||| ||||| ||||||| ||||||||||||||||||
Sbjct: 59 tcaatatgaatatgagaaatactagaattacttacattgtgaaacgg 13
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| ||| |||||||||||| ||| ||||| |
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagt-atttcccatattcatattgatgct 78
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 77 aatgaatcta 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagt 32
||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 59 tcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgg 13
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacgg 111
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||| ||||||||
Sbjct: 121 tgtacttcctccgtttcacaatataagtcat 91
Score = 46.1 bits (23), Expect = 2e-04
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
||||||||||||| |||||||| ||| ||||||||||||| ||| |||||
Sbjct: 12 tccgtttcacaatataagtcattctag-catttcccatattcatattgatg 61
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 77.8 bits (39), Expect = 4e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||| ||||||| ||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag-cattttccatattcatattgatgtt 63
Query: 67 aatgaat 73
|||||||
Sbjct: 64 aatgaat 70
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgg 13
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||| | |||||||||||||||||||||| ||||||||
Sbjct: 75 tcaatatgaatatggaaaatgctagaatgacttacattatgaaacgg 121
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtata 166
||||||||| | ||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtata 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcat 102
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagt 32
||||||||||||||||||||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagt 30
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||| ||||||||||||||||||
Sbjct: 44 gaaatgctagaataacttacattgtgaaacgg 13
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||| ||| | ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 tcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||| | |||||||||||||||||||| |||||||||||| || |||||
Sbjct: 82 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||||||| ||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag-catttcccacatttatattgatatt 63
Query: 67 aat 69
|||
Sbjct: 64 aat 66
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||| ||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcat 108
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 92 tcaatatgaatgtagaaaatgctagaatgatttacattgtgaaacggagggagta 146
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtatat 167
|||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggagggagtatat 2
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| |||| |||||||||| ||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag-tatttttcatatttatattgatgct 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||||||| |||||||| ||| ||| ||||| ||| ||| |||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctag-catatcccacattcatattgatgtt 74
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 73 aatgaatcta 64
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | ||| |||||||||||||||| ||||||||||||
Sbjct: 78 tcaatatgaatgtgggatatgctagaatgacttatattgtgaaacgg 124
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | ||||||||||||||||||||||||||||||| | |||||||
Sbjct: 76 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagggagta 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||| ||||||||||||||||||| |||| |||||||| ||| ||| |||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagc-atttcccacattcatattgatgtt 72
Query: 67 aatgaatctat 77
|||||||||||
Sbjct: 71 aatgaatctat 61
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaac 154
||||||||||| | | |||||||| ||||||||| ||||||||||
Sbjct: 55 tcaatatgaatgtggaaaatgctataatgacttatattgtgaaac 11
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 77 tcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgg 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatat 167
||||||||||| | | |||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtatat 2
Score = 63.9 bits (32), Expect = 7e-10
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||| ||||||| ||| |||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctag-cattttccatattcatattgatgtt 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagt 32
|||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||| ||| ||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag-cattttccacattcatattgatgtt 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtata 166
||||||||| | ||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 83 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtata 137
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||| | |||||||||||||||||||||||||||||| || ||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagtat 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| | || ||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctag-catttcccacattcatatttatatt 77
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 76 aatgaatcta 67
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | |||||||||||||||||||| |||||||||||| |||||||
Sbjct: 86 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 140
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 73.8 bits (37), Expect = 7e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
|||||| ||||||||||||||| |||||||| |||| |||||||| ||| ||| |||||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctagc-atttcccacattcatattgatg 84
Query: 65 ttaatgaatctat 77
|||||||||||||
Sbjct: 83 ttaatgaatctat 71
Score = 65.9 bits (33), Expect = 2e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| | |||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctag-catttcccacattcatattaatg 61
Query: 65 ttaat 69
|||||
Sbjct: 62 ttaat 66
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatata 168
||||||||||| | |||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 58 tcaatatgaatgt-ggaaatgctagaatgacttatattgtgaaacggagggagtatata 1
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgg 106
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||| ||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcat 86
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatat 167
||||||||||||| | ||||| ||||||||||||||||||||||||| || |||||||
Sbjct: 59 tcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggaggaagtatat 2
Score = 69.9 bits (35), Expect = 1e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| || ||||| ||||||| ||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattcta-acattttccatattcatattgatgtt 63
Query: 67 aatgaat 73
|||||||
Sbjct: 64 aatgaat 70
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||| |||| ||| ||||||||||||| |||||||| |||||||
Sbjct: 82 tcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||| ||||||||||| ||||||||||||
Sbjct: 137 gtactccctccgtttcataatgtaagtcat 108
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttag-catttcccacattcatattgatgct 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | |||||||||| ||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgg 13
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctaga-atgacttacattgtgaaacggggggagta 164
||||||||||| | |||||||||| | ||||||||||||||||||||| |||||||
Sbjct: 88 tcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagta 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||| ||||||||||||||||||||||||
Sbjct: 143 tactccctccgtttcacaatgtaagtcat 115
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 132/158 (83%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||| |||| | |||||||| ||| |||| ||||||| ||| ||||| |
Sbjct: 5 tacttcctccgttccacagtataagtcattctagt-attttccatattcatattgatgct 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||||||| || |||||||||||||| |||||| ||| | | ||||||||||||| ||
Sbjct: 64 aatgaatttag-atagatatatatgtt-tagattcatt-agcatcaatatgaatatgaga 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||| |||||||||||| |||||| ||||| |||||||
Sbjct: 121 aatgttagaatgacttatattgtggaacggagggagta 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||| | |||| ||||||||||||| | |||| |||||
Sbjct: 59 tcaatatgaatatggaaaatactagaatgacttatactgtggaacgg 13
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||| |||||| |||||||| || | ||||| |||||| ||| ||||| |
Sbjct: 158 tactccctccgttccacaatataagtcattctaac-atttctcatattcatattgatgct 100
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 132/158 (83%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||||| |||| ||| |||| || |||| ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagc-attgcccacatatatatagatgtt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||||||| || ||| | || | |||| |||||| ||| ||| || |||||||| | ||
Sbjct: 99 aatgaatttag-atatagatgtgtgtc-tagattcatt-aacatctatatgaatgttggt 43
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||| |||||||| |||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||||||||||||||||||||| ||||||||
Sbjct: 121 aatgctagaatgacttacattatgaaacgg 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| ||||||||||| |||||||||||| ||| |||| || | ||| ||| |||||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctag-cattaccaacattcatatagatgt 62
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||| |
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttag-catttcccacattcatattgatgct 85
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 84 aatgaatcta 75
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | |||||||||| ||||||||||||||||||||||
Sbjct: 89 tcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgg 135
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctaga-atgacttacattgtgaaacggggggagta 164
||||||||||| | |||||||||| | ||||||||||||||||||||| |||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| |||||||| ||||||| |||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctag-tatttcccacatttatattgatgtt 93
Query: 67 aatgaa 72
||||||
Sbjct: 92 aatgaa 87
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||| ||| | |||||| ||||||||||||||||||||||||||
Sbjct: 97 tcaatataaatgtgggaaatactagaatgacttacattgtgaaacgg 143
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||||| |||||||||||||||| ||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagtat 96
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||| ||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | | |||||||||||||||||| |||||||||||| |||||||
Sbjct: 86 tcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggagggagta 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| | |||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctag-catttcccacattcatattaatg 61
Query: 65 ttaat 69
|||||
Sbjct: 62 ttaat 66
Score = 65.9 bits (33), Expect = 2e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
|||||| ||||||||||||||| |||||||| ||| ||||| ||| ||| ||| |||||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctag-cattttccacattcatattgatg 84
Query: 65 ttaatgaatctat 77
|||||||||||||
Sbjct: 83 ttaatgaatctat 71
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 135/163 (82%), Gaps = 6/163 (3%)
Strand = Plus / Minus
Query: 3 gttgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatga 62
|||||||| |||||||||||||||||||||||| ||| ||||| || ||| ||| | |
Sbjct: 160 gttgtactccctccgtttcacaatgtaagtcattctag-catttttcacattcatactca 102
Query: 63 tgttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatat 122
||||||||||||| | | |||||||||| ||| ||| ||| ||| | | ||||||| |
Sbjct: 101 tgttaatgaatct---agatatatatatgt-ctaaattcatt-aacatgagtatgaatgt 47
Query: 123 aggaaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||| ||||||||||| |||||||||||| || |||||
Sbjct: 46 gggaaatgccagaatgacttatattgtgaaacggaggaagtat 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 131/158 (82%), Gaps = 6/158 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||||||| |||||||| | || |||||||| ||| ||| | |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggc-atttcccacattcatactcatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
||||||| || | |||||||| || |||||| ||| ||| | | ||||||| | |
Sbjct: 64 aatgaatttag---acatatatatatc-tagattcatt-aacatgagtatgaatgtgaaa 118
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||||||||| |||||||
Sbjct: 119 aatgctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||| ||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcat 33
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||||||||||||||||| ||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacgg 96
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 93/108 (86%), Gaps = 3/108 (2%)
Strand = Plus / Minus
Query: 60 tgatgttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaa 119
||||| ||||||||||| ||||||||||||||| |||||| ||| | || |||||||
Sbjct: 106 tgatgctaatgaatctag-atagatatatatgtc-tagattcattgg-catcgatatgaa 50
Query: 120 tataggaaatgctagaatgacttacattgtgaaacggggggagtatat 167
| | | |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattatgaaacggagggagtatat 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 132 tagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||| |||||||| |||||||
Sbjct: 126 tagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtata 166
||||||||||| | ||||||| |||||||||||| |||||||||||| |||||||||
Sbjct: 81 tcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacggagggagtata 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | | |||||||||||||||||| ||||||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacgg 13
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||||||| |||||||| || | |||||||| ||| ||| |||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaac-atttcccacattcatattgatgtt 77
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 76 aatgaatcta 67
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcat 33
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgggggga 161
||||||||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct: 59 tcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacgggggga 161
||||||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct: 86 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 135
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 12 cctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgttaatga 71
|||||||||||||||||||||||| ||| |||||| || ||| ||| | |||| |||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctag-catttctcacattcatatttatgtcaatga 75
Query: 72 atcta 76
|||||
Sbjct: 74 atcta 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 cctccgtttcacaatgtaagtcat 35
||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatg 64
|||||| |||||||||||||||||||||||| ||| |||||| |||||||||| |||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttag-catttctcatatttatattgatg 61
Query: 65 ttaa 68
||||
Sbjct: 62 ttaa 65
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||
Sbjct: 59 tcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||||||| |||||||| ||| |||||| |||||||||| |||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttag-catttctcatatttatattgatgtt 64
Query: 67 aa 68
||
Sbjct: 63 aa 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatata 168
||||||| ||||| ||||||||| ||||||||| |||||||||||| || ||||||||
Sbjct: 68 tcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagtatata 126
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||| | | |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | | |||||||||||| |||||||||||||||||| |||||||
Sbjct: 71 tcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagt 32
|||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagt 32
|||| |||||||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagt 100
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 93 cctagatttattnaacgtcaatatgaatataggaaatgctagaatgacttacattgtgaa 152
|||||||| ||| ||| |||||||||||||||| |||||||||| | |||||||| ||||
Sbjct: 75 cctagattcatt-aacatcaatatgaatataggcaatgctagaaagtcttacattatgaa 17
Query: 153 acggggggagta 164
|||| |||||||
Sbjct: 16 acggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| ||||||||||| |||||||| | | |||| ||| || ||||| ||| ||||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttctagc-attgcctatattcatattgatgt 62
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgggggga 161
||||||||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct: 104 tcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 155
Score = 65.9 bits (33), Expect = 2e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgggggga 161
||||||||||| | || ||||||||||||||||||||||||||||| ||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||| | |||||||||||||||||||| |||||||||||| || |||||
Sbjct: 82 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||| |||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||| ||| ||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag-cattttccacatttatattgatatt 63
Query: 67 aat 69
|||
Sbjct: 64 aat 66
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||| ||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcat 108
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| | | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 107 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 124/151 (82%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||| ||| ||| ||| | ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctag-cattttccacattcatataggtgtt 100
Query: 67 aatgaatcta-tcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||||| ||| |||||||| ||||||| ||| ||| | |||||||| | ||
Sbjct: 99 aatgaatctagacatctatatatat---ctagattcatt-aacacctatatgaatgtggg 44
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
||||| |||||||||||||||| || |||||
Sbjct: 43 aaatgttagaatgacttacattatggaacgg 13
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||| | | |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | | |||||||||||| |||||||||||||||||| |||||||
Sbjct: 71 tcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagt 32
|||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagt 32
|||| |||||||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagt 100
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||| | |||||||||||||||||||||||| |||||||| || |||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagtat 116
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||||| ||| ||||||||| ||| ||| |||| ||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctag-catttcccacattcatattgatatt 57
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 56 aatgaatcta 47
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 128 atgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||| |||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 59 tcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcat 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtatata 168
||||| || ||||||||||||| |||||| | |||||||||||
Sbjct: 105 aaatgttaaaatgacttacattatgaaacagagggagtatata 147
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagtatat 167
|||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 81 ggaaatgctagaatgacttagattgtgaaacggagggagtatat 124
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||||||| |||||||| |||| |||||||| ||||||| |||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagc-atttcccacatttatactgatgtt 63
Query: 67 aatgaa 72
||||||
Sbjct: 62 aatgaa 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||| | |||||||||| ||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgg 13
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| | |||||||||||||||||||| |||||||||||| |||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | |||| |||||||||||||||||||||||||| | |||||||
Sbjct: 69 tcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcat 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | | || ||||| ||||||||||||| ||||||||
Sbjct: 59 tcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacgg 13
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | |||||||||||||||||||||||| ||||||||
Sbjct: 75 tcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgg 121
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||||| ||| ||||||||| ||| ||| |||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctag-catttcccacattcatattgatgtt 71
Query: 67 aatgaatcta 76
|||| |||||
Sbjct: 70 aatggatcta 61
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 139 acttacattgtgaaacggggggagtat 165
|||||||||||||||||| ||||||||
Sbjct: 30 acttacattgtgaaacggagggagtat 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagt 32
|||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||||| ||| ||||| ||| ||| ||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctag-cattttccacattcatattgatgtt 63
Query: 67 aatgaatctat 77
|||||||||||
Sbjct: 64 aatgaatctat 74
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | |||||||||||||||||||||||||||||| | |||||||
Sbjct: 95 tcaatatgaatgtgagaaatgctagaatgacttacattgtgaaaccgagggagta 149
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | | |||||||||||||||||||||| ||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaatgacttacattatgaaacgg 13
Score = 54.0 bits (27), Expect = 6e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||| ||||||||||||||||||| ||| |||||| || ||| ||| |||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctag-catttctcacattcatattgatgtt 91
Query: 67 aatgaatctat 77
|||||| ||||
Sbjct: 90 aatgaaactat 80
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||| |||||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 117 gaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||| | ||||||||||||||||| ||||||||||||| |||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcat 35
|||||| ||||||||||||||||||||||||
Sbjct: 118 tgtactccctccgtttcacaatgtaagtcat 88
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | |||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 84 tcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||| ||||||||||| |||||||||||| ||| ||||||||| ||| ||| ||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtag-catttcccacattcatattgatgt 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtatat 167
|||||||||||||||||| ||| |||||| | || |||||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacagaggaagtatat 2
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||| |||||| ||| |||||||| |||| |||| ||| ||| ||| ||||| |
Sbjct: 5 tacttcctctgtttcataatataagtcattctagc-attttccacattcatactgatgct 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 122 taggaaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||||||||||||||||
Sbjct: 47 taggaaatgctagaatgacttacattgtgaaacgg 81
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcat 33
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 131 ctagaatgacttacattgtgaaacggggggagtat 165
|||||||||||||||||||||||||| || |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
||||| |||||||||||||||||||||||
Sbjct: 89 tacttactccgtttcacaatgtaagtcat 61
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 92 tcaatatgaatatagtaaatgctagaatgacttatattgtggaacgg 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| || |||||||||| ||| ||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcatttta-ccatttcccacattcatattgatgtt 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | ||||||| || ||||||||||||| |||||||| |||||||
Sbjct: 59 tcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||||||||||||| |||||| |||||||| ||| ||||| | ||||| ||| ||||||
Sbjct: 147 gtacttcctccgttccacaatataagtcattctag-catttactatattcatattgatgt 89
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 88 taatgaatcta 78
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||||||| |||||||
Sbjct: 101 aaatgctagaatgacttacattgtgaaacggagggagta 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||||||| ||| ||||| ||| | ||||| |||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctag-cattttccacaattatattgatgtt 81
Query: 67 aatgaatctat 77
||| |||||||
Sbjct: 80 aataaatctat 70
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| ||||||||||||||||||| || |||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaatggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||| ||||| ||||||||||||||||||
Sbjct: 4 gtactccctccatttcacaatgtaagtcat 33
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | ||||||| |||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacgg 13
Score = 63.9 bits (32), Expect = 7e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgttaatgaa 72
||||||||||||||||||||||| || ||||||||| ||| ||| |||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattcta-acatttcccacattcatattgatgttaatgaa 69
Query: 73 tcta 76
||||
Sbjct: 70 tcta 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||||||||||||
Sbjct: 105 aaatgctagaatgacttacattgtgaaacgg 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||
Sbjct: 137 ctccgtttcacaatgtaagtcat 115
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 59 tcaatatgaatatagtaaatgctagaatgacttatattgtggaacgg 13
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| || |||||||||| ||| ||| |||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcatttta-ccatttcccacattcatattgatgtt 88
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 87 aatgaatcta 78
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||||||||||||| |||||| |||||||| ||| ||||| | ||||| ||| ||||||
Sbjct: 4 gtacttcctccgttccacaatataagtcattctag-catttactatattcatattgatgt 62
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | ||||||| || ||||||||||||| |||||||| |||||||
Sbjct: 92 tcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacggagggagta 146
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagtatat 167
|||||||||||||||||||||||||||||||| || |||||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagtatat 129
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||| ||||| | |||||||||||||| ||||| |||||||||||| |||||||
Sbjct: 59 tcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatat 167
|||||||| | | |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagtatat 2
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||| ||||||||||||||||| |||||||| |||||||
Sbjct: 120 aaatactagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | | |||||||| |||||||||||||||||||||| |||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||||||| ||| ||||| ||| ||| ||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttag-cattttccacattcatattgatgt 62
Query: 66 taatga 71
||||||
Sbjct: 63 taatga 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | | |||||||| ||| | |||||||||||||||| |||||||
Sbjct: 74 tcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 114 tatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 87
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||||||||| | |||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcat 67
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||| |||| |||||||||||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | ||||||||||||||||||| |||||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacgg 13
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||| ||||||| ||| ||||||||| ||| ||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctag-catttcccacattcatattgatgtt 63
Query: 67 aatgaa 72
||||||
Sbjct: 64 aatgaa 69
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgg 13
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcat 33
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 128 atgctagaatgacttacattgtgaaacggggggagta 164
|||||||| |||||||||||||||||||| |||||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagta 111
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtca 34
|||| |||||||||||||||||||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtca 84
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||||||||||||||||||||||||||| | ||| ||||| ||||||| ||| | ||||
Sbjct: 135 gtacttcctccgtttcacaatgtaagtccttctag-cattttccatattcatattaatgt 77
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 76 taatgaatcta 66
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | ||||||||||| |||||||||||||||||||
Sbjct: 82 aatatgaatatggaaaatgctagaaggacttacattgtgaaacgg 126
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| | | ||||| |||||||||||||||| |||||||| |||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||||||||||||||||||| |||||||| ||| |||||| || ||| ||| ||||||
Sbjct: 128 gtacttcctccgtttcacaatataagtcattctag-catttctcacattcatattgatgt 70
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 69 taatgaatcta 59
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacgg 13
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | ||||||||||||||||||| ||||||||||||
Sbjct: 73 tcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 119
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtatat 167
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 43 aaatgctagaataacttacattgtgaaacggagggagtatat 2
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||| ||| ||| |||||||| ||||| |||||||||||||||| |||||||
Sbjct: 92 tcaatataaatgtagaaaatgctaaaatgatttacattgtgaaacggagggagta 146
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||||||||||| |||| ||| ||||| | | ||||||| ||||| |
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttag-cattttctacatttatattgatgct 88
Query: 67 aatgaat 73
|||||||
Sbjct: 87 aatgaat 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagt 32
|||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 72/82 (87%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| ||||||||||||||||||||| || ||| ||||| ||| | ||||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctag-cattttccacaattatattgatgt 62
Query: 66 taatgaatctatcatagatata 87
|||||||||||| |||||||||
Sbjct: 63 taatgaatctat-atagatata 83
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||| |||||||||||||||||| |||||||
Sbjct: 43 aaatgctagaataacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatca 37
|||| ||||||||||||||||||||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcatca 96
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 136 atgacttacattgtgaaacggggggagta 164
||||||||||||||||||||| |||||||
Sbjct: 98 atgacttacattgtgaaacggagggagta 126
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 131/158 (82%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||||| ||||| || ||||||| ||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcc-ttacccatatgcatatagatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| ||| | | |||||| |||||| ||| | | || |||||||| | ||
Sbjct: 64 aatgaatcta-gatatagacatatgt-ttagattcatt-accatctatatgaatgtgggc 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
||||||| ||||||||||||| |||||||| |||||||
Sbjct: 121 aatgctaaaatgacttacattatgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 3e-06
Identities = 124/152 (81%), Gaps = 6/152 (3%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| ||||||||||| |||||||||||| |||| ||| |||| ||| ||| ||||
Sbjct: 159 gtactccctccgtttcataatgtaagtcattttagc-attgcccacattcatatagatgg 101
Query: 66 taatgaatctat-catagatatatatgtcctagatttattnaacgtcaatatgaatatag 124
||||||||||| |||| | ||||| ||||||| ||| ||| || ||||| |||| |
Sbjct: 100 taatgaatctaaacatatgtctatat---ctagattcatt-aacatctatatgcatatgg 45
Query: 125 gaaatgctagaatgacttacattgtgaaacgg 156
| || |||||||||||||||||| ||||||||
Sbjct: 44 gtaaggctagaatgacttacattatgaaacgg 13
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 67.9 bits (34), Expect = 4e-11
Identities = 131/160 (81%), Gaps = 10/160 (6%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
|||||||||||||||||||||||||||||| ||| |||||| || ||||| | |||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttag-catttctcacatttacattgatgc 62
Query: 66 taatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagg 125
|||||||| ||||||||| | ||||||| ||| | | ||||||| ||| | |
Sbjct: 63 taatgaat-----ttagatatatct---ctagattcatt-agcatcaatataaatgtgga 113
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||| ||||||||| |||||||||||| ||||||||
Sbjct: 114 aaatgctaaaatgacttatattgtgaaacggagggagtat 153
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||||||| |||||||| ||| ||||| ||| ||||||| ||||| |
Sbjct: 152 tactccctccgtttcacaatataagtcattttag-cattttccacatttatattgatgct 94
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 93 aatgaatcta 84
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacgg 156
||||||||| ||||||||||||||||||||||
Sbjct: 44 gaaatgctaaaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtatat 167
||||||||||||||||||||||||||||||| || |||||||
Sbjct: 93 aaatgctagaatgacttacattgtgaaacggaggaagtatat 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| |||||||||||||||||||||| |||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||| || |||||| |||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctag-catttttcacgtttatattgatgtt 73
Query: 67 aatgaat 73
|||||||
Sbjct: 72 aatgaat 66
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagtcat 35
|||||| ||||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||||| |||||||| |||||||
Sbjct: 88 ggaaatgctagaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| |||||||||||||||||||||| |||||||
Sbjct: 45 ggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||||||||||||||||||||||| || |||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagtat 109
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcat 80
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagtcat 35
|||||| ||||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 44 gaaatgctagaatgacttacattatgaaacggagggagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||||||| ||| |||||| |||||| ||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctag-catttctcatattgatatagatgtt 63
Query: 67 aatgaatcta 76
| ||||||||
Sbjct: 64 agtgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| ||||||||||||| |||||| | |||||||
Sbjct: 120 aaatgctacaatgacttacattatgaaacagagggagta 158
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||||||| ||| || ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttag-catttcccacattcatgtagatgtt 63
Query: 67 aatgaatc 74
||||||||
Sbjct: 64 aatgaatc 71
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 115 atgaatataggaaatgctagaatgacttacattgtgaaacgg 156
|||||| | |||||||||| ||||||||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctaaaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||||||||| |||||||||||||||| ||||||||
Sbjct: 66 aaatgctagaatgatttacattgtgaaacggagggagtat 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||| ||||||||||||| ||||||||||| |||||||
Sbjct: 43 aaatactagaatgacttatattgtgaaacgaagggagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 4 ttgtacttcctccgtttcacaatgtaagtcat 35
||||||||||||||||||||||||||||||||
Sbjct: 2 ttgtacttcctccgtttcacaatgtaagtcat 33
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgg 13
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacgg 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 cctccgtttcacaatgtaagtcat 35
||||||||||||||||||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcat 84
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtat 165
||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 93 aaatgatagaatgacttacattgtgaaacggagggagtat 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacgggggga 161
|||||| |||||||||||| |||||||||||| ||||
Sbjct: 44 gaaatgatagaatgacttatattgtgaaacggaggga 8
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||| ||||||||||||||||||||||||
Sbjct: 131 tactccctccgtttcacaatgtaagtcat 103
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacgg 13
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagtatat 167
||||||||||||||||||||||||||| ||||| || |||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtggaacggaggaagtatat 2
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 130 gctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||||| |||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccat 44
||||| |||||||||||||||||||||||| |||||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcattctagccat 57
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
||||||||||||| |||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcat 33
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||| |||||||||||| |||||||
Sbjct: 44 gaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||| ||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 81 tcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||||||| |||||||| ||| ||||||||| ||| | | |||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctag-catttcccacattcacattgatatt 77
Query: 67 aatgaatct 75
|||||||||
Sbjct: 76 aatgaatct 68
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||| |||||||||||||||| |||||||
Sbjct: 44 gaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtata 166
||||||||||| | |||||||||| |||||||| ||||||| |||| ||| ||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacgagggaagtata 116
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||| ||||||||||||||||||| ||||
Sbjct: 4 gtactccctccgtttcacaatgtaactcat 33
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 63.9 bits (32), Expect = 7e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| |||||| || ||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag-catttctcacatttatattaatgtt 63
Query: 67 aatg 70
||||
Sbjct: 64 aatg 67
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacgg 156
||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacgg 13
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||||| |||||
Sbjct: 64 aatgctagaatgacttacattgtggaacgg 93
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | |||||||||||||||||||||| ||||||| | |||||||
Sbjct: 59 tcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | ||||||||||||||||||| ||||||||||||
Sbjct: 81 tcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||||||| |||||||| ||| |||||| || ||| ||| ||||| |
Sbjct: 135 tacttcctccgtttcacaatataagtcattctag-catttctcacattcatattgatgct 77
Query: 67 aatgaatct 75
|||||||||
Sbjct: 76 aatgaatct 68
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatat 167
|||||||||| ||||||||| | |||||| ||||||||||||| ||||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagtatat 2
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | | ||||| |||| |||||||||| ||||||||| |||||||
Sbjct: 76 tcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacggagggagta 130
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 124 ggaaatgctagaatgacttacattgtgaaac 154
|||||||||||||||||||||||||||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaac 15
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 8 acttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtta 67
||||||||||||||||||| |||||||| ||| ||||| || |||| ||| ||||| ||
Sbjct: 131 acttcctccgtttcacaatataagtcattttag-cattttccgtattcatattgatgata 73
Query: 68 atgaatcta 76
|||||||||
Sbjct: 72 atgaatcta 64
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
|||||||||||| | |||||||| ||||||||| ||||||||||||
Sbjct: 78 tcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacgg 124
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | |||||| ||||||||||||| ||||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgg 13
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | ||||||| | |||||||||||||| |||||||| |||||||
Sbjct: 101 tcaatatgaatgtgggaaatggtggaatgacttacattatgaaacggagggagta 155
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 94 ctagatttattnaacgtcaatatgaatataggaaatgctagaatgacttacattgtgaaa 153
||||||||||| ||| ||| ||||||| | |||||| ||||||||||||||||| |||||
Sbjct: 75 ctagatttatt-aacatcactatgaatgtgggaaatactagaatgacttacattatgaaa 133
Query: 154 cggggggagta 164
| | |||||||
Sbjct: 134 cagagggagta 144
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||| ||||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacgg 13
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcat 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||| |||||| |||||||||||| ||| |||||||| ||| ||| ||||||
Sbjct: 145 gtactccctctgtttcataatgtaagtcattctag-tatttcccacattcatagtgatgt 87
Query: 66 taatgaatcta 76
|||| ||||||
Sbjct: 86 taataaatcta 76
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||||||||||||||||||||||||||
Sbjct: 92 aaatgctagaatgacttacattgtgaaacgg 122
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||||||| ||| ||||| || | |||| |||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctag-catttttcacgtatatattgatgtt 72
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 71 aatgaatcta 62
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagta 164
||||| ||||||||||||||||||| |||||| |||||||
Sbjct: 44 gaaatactagaatgacttacattgttaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagtcat 35
|||||| ||||||||| ||||||||||||||
Sbjct: 3 tgtactccctccgtttaacaatgtaagtcat 33
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| |||||||||||||||||||||||| ||| ||||| || ||| ||| ||||||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttag-tatttctcacattcatattgatgt 90
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 89 taatgaatcta 79
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||| | ||||| ||| |||||||||||||||||||||| |||||||
Sbjct: 93 tcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacggagggagta 147
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||| ||| |||||||||||||||||||| | |||||||
Sbjct: 43 aaatactaaaatgacttacattgtgaaacagagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||| |||| |||||||||||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 118 aatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||| |||||||||||||||||| ||||||||||||
Sbjct: 43 aatatagaaaatgctagaatgacttatattgtgaaacgg 81
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 128 atgctagaatgacttacattgtgaaacggggggagtat 165
|||||||||||||||||| |||||||||| || |||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacagtgtaagtcat 33
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||| |||||||| |||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| ||| |||||||| || ||||| ||| ||| ||| |||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattcta-acattttccacattcatattgatgtt 81
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 80 aatgaatcta 71
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | | ||||| |||||||||||| ||| ||||||||
Sbjct: 85 tcaatatgaatgtggaaaatgttagaatgacttatattatgaaacgg 131
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 107 acgtcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||| ||||| |||| || ||||||||||||||||||||| ||||||||
Sbjct: 62 acgtctatatgcatatgggtaatgctagaatgacttacattatgaaacgg 13
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcat 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||||| ||||||| |||||| | ||||||||
Sbjct: 95 aatgctagaatgatttacattatgaaacagagggagtat 133
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 130/158 (82%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||| | | |||| ||| |||||||| || ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagc-attgcccatattcatttagatgtt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| | | || ||| ||| |||||| ||| |||||| ||||| |||| |
Sbjct: 99 aatgaatctag-acatatgtatgtgtt-tagattcatt-aacgtctatatgtatatgagc 43
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| | ||||||||||||||||| |||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaag 31
||||| ||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 115 atgaatataggaaatgctagaatgacttacattgtgaaacgg 156
|||||||| || ||||||| || | |||||||||||||||||
Sbjct: 109 atgaatatgggcaatgctaaaaagtcttacattgtgaaacgg 150
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||||| ||| ||||| || ||| ||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctag-tatttctcacattcatattgatgtt 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||| | ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||| | ||||| ||||||||||||||||| |||||||| || |||||
Sbjct: 59 tcaatatgaatgtgagaaatactagaatgacttacattatgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||||||| |||||||| ||| |||| ||| ||| ||| |||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttag-tattttccacattcatattgatgtt 72
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 71 aatgaatcta 62
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||||||| | | |||| | | |||||||||||||||||||||| ||||||||
Sbjct: 59 tcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcat 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | | |||| ||| ||||||||| ||||||||||||
Sbjct: 76 tcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacgg 122
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 130/158 (82%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||||| | ||| ||| |||| ||| ||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctag-tattgcccacattcatatagatgtt 63
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| | | |||||| ||| ||||||| ||| ||| || |||||||||| |
Sbjct: 64 aatgaatcta-gacatatatatgtgt-ctagattcatt-aacatctatatgaatatgagc 120
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| | |||||||| |||||||| |||||||
Sbjct: 121 aatgctagaaagtcttacattatgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 3e-06
Identities = 123/150 (82%), Gaps = 4/150 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| ||||||||||| |||||||| | | ||| |||| | |||||| ||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctag-cattgctcatattcatatagatgtt 100
Query: 67 aatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaatatagga 126
|||||||||| | | |||||||||| ||||||| ||| ||| || |||||||| | ||
Sbjct: 99 aatgaatcta-gacacatatatatgt-ctagattcatt-aacatctatatgaatgtgggc 43
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||| |||||| |||||||||| ||||||||
Sbjct: 42 aatactagaaagacttacattatgaaacgg 13
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcat 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 135 aatgacttacattgtgaaacggggggagtat 165
|||||||||||||||||||||| || |||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||| ||||| ||||||||||||| |||| ||| ||||| |||||||||| ||||
Sbjct: 107 gtactccctccatttcacaatgtaaatcattttag-catttttcatatttatattgatac 49
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 48 taatgaatcta 38
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| ||||| ||||||||||||| || |||||||
Sbjct: 68 aaatgctaaaatgatttacattgtgaaatggagggagta 106
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 132 tagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||||| |||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtatata 168
|||| |||||||||||| ||||||||||||| || ||||||||
Sbjct: 70 aaatactagaatgacttgcattgtgaaacggaggaagtatata 112
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcat 33
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
||||||||||||||||||||| |||||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcat 80
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 58.0 bits (29), Expect = 4e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 94 ctagatttattnaacgtcaatatgaatataggaaatgctagaatgacttacattgtgaaa 153
||||||||||| ||| || |||||||| | | ||||||||||| ||||||||| |||||
Sbjct: 68 ctagatttatt-aacatctatatgaatgtggacaatgctagaataacttacattatgaaa 126
Query: 154 cggggggagtata 166
||| |||||||||
Sbjct: 127 cggagggagtata 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagt 32
|||||||||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagt 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||||||||||| ||||||||| ||||||||
Sbjct: 42 aatgctagaataacttacattatgaaacgg 13
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcat 102
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||| ||||||||||||||||||||||
Sbjct: 92 aaatgctaaaatgacttacattgtgaaacgg 122
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 124 ggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||| ||| ||||||||||||||| |||||| |||||||
Sbjct: 45 ggaaatactaaaatgacttacattgttaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaagtcat 35
|||||| ||||||||| ||||||||||||||
Sbjct: 3 tgtactccctccgtttaacaatgtaagtcat 33
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcat 33
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtat 165
|||| |||||||||||||||||||||||||| || |||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggaggaagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||| ||||||||
Sbjct: 139 tacttcctccgtttcacaatataagtcat 111
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 125 gaaatgctagaatgacttacattgtgaaacgg 156
||||| ||||||||||||| ||||||||||||
Sbjct: 100 gaaatcctagaatgacttatattgtgaaacgg 131
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||| | |||||| ||| ||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacgg 101
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcat 81
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcat 35
||||| ||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcat 33
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 135 aatgacttacattgtgaaacggggggagta 164
|||||||||||||||||||||| |||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcat 33
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 129 tgctagaatgacttacattgtgaaacgg 156
||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacgggggga 161
||||||||||||||||||| |||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttatattgtgaaacggaggga 8
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||| ||||||||
Sbjct: 139 tgtacttcctccgtttcacaatataagtcat 109
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 12 cctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgttaatga 71
||||||||||||||| |||||||| ||| |||||| ||||| ||| |||| |||||||
Sbjct: 10 cctccgtttcacaatataagtcattctag-catttctcatatagatattgatattaatga 68
Query: 72 atcta 76
|||||
Sbjct: 69 atcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||| ||||||||| ||||||||||||
Sbjct: 99 aaatgctaaaatgacttatattgtgaaacgg 129
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcat 33
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||||| | | |||| ||| ||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacgg 13
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 135 aatgacttacattgtgaaacggggggagtat 165
|||| ||||||||||||||||| ||||||||
Sbjct: 81 aatggcttacattgtgaaacggagggagtat 111
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| || ||| |||||| | ||||||||||||||||| |||||||
Sbjct: 107 atatgaatatgggcaatactagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagta 164
||||||||||||||||||||||| ||||||| |||||||
Sbjct: 107 gaaatgctagaatgacttacattatgaaacgaagggagta 146
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
|||||||| ||| ||||||||||||||||||||| ||||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacgg 128
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaagtcat 35
|||||||||||||||||| ||||||||||||
Sbjct: 138 tgtacttcctccgtttcataatgtaagtcat 108
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 132 tagaatgacttacattgtgaaacggggggagta 164
|||||||||||||||| |||||||| |||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 82/96 (85%), Gaps = 3/96 (3%)
Strand = Plus / Minus
Query: 61 gatgttaatgaatctatcatagatatatatgtcctagatttattnaacgtcaatatgaat 120
|||||||||||||||| ||| ||| ||||||| |||||| ||| ||| || | ||||||
Sbjct: 105 gatgttaatgaatctaa-atacatacatatgtc-tagattcatt-aacatctaaatgaat 49
Query: 121 ataggaaatgctagaatgacttacattgtgaaacgg 156
|| || |||||||||| | |||||||||||||||||
Sbjct: 48 atgggcaatgctagaaagtcttacattgtgaaacgg 13
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
||||||||||||||||||||||||| | | ||| |||| |||||||| || ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctag-cattgcccatattcatttagatgtt 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 131 ctagaatgacttacattgtgaaacggggggagtat 165
|||||| | ||||||||||||||||| ||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagtat 165
|||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 43 aaatactagaatgacttacattatgaaacggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtat 165
||||||| ||||| | |||||||||||||||||| ||| ||||| || ||||||||
Sbjct: 85 tcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagtat 140
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||| |||||||||||||||| |||||||| |||||||
Sbjct: 44 gaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
||||| |||||||||||||||| | |||||| |||||||
Sbjct: 100 aaatgttagaatgacttacattataaaacggagggagta 138
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtat 165
|||||||||| | ||||||||||||||||| ||||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagtat 159
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
|||||||||| | |||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacgg 13
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 54.0 bits (27), Expect = 6e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||||||||||||||| |||||||||| | ||| |||| |||| ||| ||| |||||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctag-cattgcccacattcatatagatgt 62
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacggggggagta 164
|||| ||| |||||||||||||||||||||| |||||||
Sbjct: 43 aaatactataatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatag 40
|||| |||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatag 38
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 109 gtcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||||| | |||| ||||||||||||||||| ||||| || |||||||
Sbjct: 61 gtcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 54.0 bits (27), Expect = 6e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgt 65
||||||||||||||||| |||||||||| | ||| |||| |||| ||| ||| |||||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctag-cattgcccacattcatatagatgt 62
Query: 66 taatgaatcta 76
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 5 tgtacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||||
Sbjct: 139 tgtacttcctccgtttcacaatgtaag 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||||||| |||| |||||||||||||||||
Sbjct: 100 aatgctaaaatgtcttacattgtgaaacgg 129
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatat 167
|||||||||| | ||||||| || | ||||||||||||||||| ||||||||||
Sbjct: 56 atatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagtatat 2
Score = 54.0 bits (27), Expect = 6e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 94 ctagatttattnaacgtcaatatgaatataggaaatgctagaatgacttacattgtgaaa 153
||||||||||| ||| || |||||||| | | |||||||||| | ||||||||||||||
Sbjct: 71 ctagatttatt-aacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaa 129
Query: 154 cggggggagta 164
||| |||||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 5 tgtacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
||||||| |||| |||||||||||||||||
Sbjct: 42 aatgctaaaatgtcttacattgtgaaacgg 13
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 125 gaaatgctagaatgacttacattgtgaaacggggggagtatat 167
||||||||||||||||||| ||||| |||||| || |||||||
Sbjct: 54 gaaatgctagaatgacttatattgtaaaacggaggaagtatat 96
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||| ||||| |||||||| ||| |||||| || ||||||| ||||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctag-catttctcacatttatattgatgta 35
Query: 67 aatga 71
|||||
Sbjct: 34 aatga 30
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 54.0 bits (27), Expect = 6e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 94 ctagatttattnaacgtcaatatgaatataggaaatgctagaatgacttacattgtgaaa 153
||||||||||| ||| || |||||||| | || |||||||||| | ||||||||||||||
Sbjct: 65 ctagatttatt-aacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123
Query: 154 cgg 156
|||
Sbjct: 124 cgg 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaag 110
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa
Indica Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagt 32
||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagt 30
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagt 32
||||||||||||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagt 115
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 112 aatatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
||||||||| | |||||| ||| ||| ||||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacgg 132
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||| ||||||||||||| |||||||| ||| ||||| |||||||| | | |||||
Sbjct: 5 tacttcttccgtttcacaatataagtcattttag-catttttcatatttacattaatgtt 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 126 aaatgctagaatgacttacattgtgaaacgg 156
|||||||| ||||||||| ||||||||||||
Sbjct: 43 aaatgctaaaatgacttatattgtgaaacgg 13
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgacttacatt 147
||||||||||| | |||||||||||||||||||||||
Sbjct: 38 tcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgactta 143
||||||||||| | |||||||||||||||||||
Sbjct: 71 tcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| | ||||||||||||||||| |||||||
Sbjct: 42 aatgctagaaagccttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaag 31
||||| ||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaag 29
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| | ||||||||||||||||| |||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
|||||||||| | |||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacgg 13
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaag 31
||||| ||||||||||||||||||||
Sbjct: 159 gtactccctccgtttcacaatgtaag 134
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtata 166
|||||||| | || |||| ||||| | ||||||||||||||||| |||||||||
Sbjct: 107 atatgaatgtgggcaatgttagaaagtcttacattgtgaaacggagggagtata 160
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa
Indica Group
Length = 124
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 gtacttcctccgtttcacaatgtaag 31
||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaag 29
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| | || |||||||||| ||||||||||||||||| |||||||
Sbjct: 69 atatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| | ||||||||||||||||| |||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| | ||||||||||||||||| |||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 gtacttcctccgtttcacaatgtaag 31
||||| ||||||||||||||||||||
Sbjct: 159 gtactccctccgtttcacaatgtaag 134
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 131 ctagaatgacttacattgtgaaacggggggagta 164
||||||||||||| |||||||||||| |||||||
Sbjct: 123 ctagaatgacttatattgtgaaacggagggagta 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
|||||||| | || ||||||||||||||||| ||| ||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaatgacttatattatgaaacgg 13
Score = 44.1 bits (22), Expect = 6e-04
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 10 ttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgttaat 69
||||||||||||| ||| |||||||| ||| |||| |||| ||| ||| |||||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctag-cattgcccacattcatatagatgttaat 66
Query: 70 gaatct 75
||||||
Sbjct: 67 gaatct 72
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaag 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
|||||||||| | |||||||||||||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacgg 150
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtatat 167
|||||||||| | ||||||||||||||||| || |||||||
Sbjct: 102 aatgctagaaagtcttacattgtgaaacggaggaagtatat 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||
Sbjct: 139 tacttcctccgtttcacaatgtaag 115
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtatat 167
|||||||||| | ||||||||||||||||| || |||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggaggaagtatat 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaag 29
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgactt 142
||||||||||| | |||||||||||||||||||
Sbjct: 33 tcaatatgaatgtgggaaatgctagaatgactt 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatgactt 142
||||||||||| | |||||||||||||||||||
Sbjct: 91 tcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 110 tcaatatgaatataggaaatgctagaatgactt 142
||||||||||| | |||||||||||||||||||
Sbjct: 33 tcaatatgaatgtgggaaatgctagaatgactt 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatataggaaatgctagaatga 139
||||||||||| | ||||||||||||||||
Sbjct: 58 tcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa
Japonica Group
Length = 151
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
|||||||||| | |||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacgg 13
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||
Sbjct: 156 tacttcctccgtttcacaatgtaag 132
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaag 31
|||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaag 29
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacgg 156
|||||||| | || |||||||||| | |||||||||||||||||
Sbjct: 75 atatgaatgtgggcaatgctagaaagtcttacattgtgaaacgg 118
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagtata 166
|||||||||| ||||||||||||||||| |||||||||
Sbjct: 42 aatgctagaaaatcttacattgtgaaacggagggagtata 3
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 129 tgctagaatgacttacattgtgaaacggggggagta 164
|||||||| | ||||||||||||||||| |||||||
Sbjct: 63 tgctagaaagtcttacattgtgaaacggagggagta 98
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 ttgtacttcctccgtttcacaatgtaag 31
||||||| ||||||||||||||||||||
Sbjct: 2 ttgtactccctccgtttcacaatgtaag 29
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| || | | |||||| | ||||||||||||||||| |||||||
Sbjct: 56 atatgaatatgggcagtactagaaagtcttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 113 atatgaatataggaaatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| | || ||| |||||| | ||||||||||||||||| |||||||
Sbjct: 107 atatgaatgtgggcaatactagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 121 ataggaaatgctagaatgacttacattgtgaaacggggggagta 164
||||| |||| ||||| | ||||||||||||||||| |||||||
Sbjct: 115 ataggcaatgttagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 140 cttacattgtgaaacggggggagtata 166
||||||||||||||||| |||||||||
Sbjct: 134 cttacattgtgaaacggagggagtata 160
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtc 33
|||||||||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtc 31
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 140 cttacattgtgaaacggggggagtata 166
||||||||||||||||| |||||||||
Sbjct: 29 cttacattgtgaaacggagggagtata 3
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| | ||||||||||||||| | |||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacagagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
||||||| || | ||||||||||||||||| |||||||
Sbjct: 123 aatgctaaaaagtcttacattgtgaaacggagggagta 160
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| | |||| |||||||||||| |||||||
Sbjct: 99 aatgctagaaagtcttatattgtgaaacggagggagta 136
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||||| | |||| |||||||||||| |||||||
Sbjct: 42 aatgctagaaagtcttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacattgtgaaacgg 156
|||||||||| | |||||||||||||||||
Sbjct: 57 aatgctagaaagtcttacattgtgaaacgg 86
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||| |||||||||||||||||||| | || ||| |||| | || ||| ||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctag-cattgctcacattcatatagatgtt 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacattgtgaaacggggggagta 164
|||||||| | | ||||||||||||||||| |||||||
Sbjct: 42 aatgctaggaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||| | | ||| |||| |||| ||| ||| ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctag-cattgcccacattcatatagatgtt 100
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 94 ctagatttattnaacgtcaatatgaatataggaaatgctagaatgacttacattgtgaaa 153
||||||||||| ||| || |||||||| | | |||||||||| | |||||||| |||||
Sbjct: 74 ctagatttatt-aacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 154 cggggggagtatat 167
|| ||||||||||
Sbjct: 15 tggagggagtatat 2
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatgtaagtcatcatagccatttcccatatttataatgatgtt 66
|||||||||||||||| |||||||| | | ||| |||| |||| ||| ||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctag-cattgcccacattcatatagatgtt 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
