miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 222 bits (112), Expect = 1e-57
Identities = 139/148 (93%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||||| |||| | | |||||||||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgct 100
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
|||||||||||||| |||||||||||||
Sbjct: 39 gctagaatgacttatattgtgaaacgga 12
Score = 143 bits (72), Expect = 8e-34
Identities = 123/140 (87%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| |||||||||||| ||||| | |||||||||||| ||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttctcacattcatattgatactaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||| | |||||||||||||| ||||||||||||||| ||||| ||||||
Sbjct: 72 tagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgttagaat 131
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacgga 151
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 130/140 (92%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| ||||||| | ||||||||||||| ||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatgaatg 92
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 91 tagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaat 32
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacgga 12
Score = 149 bits (75), Expect = 1e-35
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||||| | ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| | ||||| | |||| |||||||| ||||||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 192 bits (97), Expect = 1e-48
Identities = 136/149 (91%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||||| ||||||| ||||| |||||||||||| |||| ||||||||||||||||||
Sbjct: 160 actactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgc 101
Query: 62 taatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaa 121
||||||||||||||||||||| ||||||||| |||||| ||||||| ||||||| |||
Sbjct: 100 taatgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaa 41
Query: 122 tgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacgga 12
Score = 119 bits (60), Expect = 1e-26
Identities = 120/140 (85%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||| | | |||| |||||||| |||||| ||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatgactc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||| | |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatgctagaat 131
Query: 131 gacttacattgtgaaacgga 150
|||||| |||||||||||||
Sbjct: 132 gacttatattgtgaaacgga 151
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 190 bits (96), Expect = 4e-48
Identities = 135/148 (91%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| ||| |||||| ||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 124 ctagaatgacttacattgtgaaacggaa 151
|||||||||||||||||||||||||||
Sbjct: 38 gtagaatgacttacattgtgaaacggaa 11
Score = 141 bits (71), Expect = 3e-33
Identities = 128/147 (87%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| ||||| | ||||||||||||| ||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| | ||||| | ||||||||||||| |||||| |||||| | |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatg 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 134/147 (91%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||||| | |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacgga 151
Score = 157 bits (79), Expect = 6e-38
Identities = 130/147 (88%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| ||||| | |||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| | ||||| | ||||||||||||| |||||||||||||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 134/147 (91%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| | ||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| ||||||||| ||||||||||||||| ||||||||||||||| ||||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacgga 151
Score = 145 bits (73), Expect = 2e-34
Identities = 130/149 (87%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||| | ||||||| |||||||||||||||||| |||||| | |||||||||||||
Sbjct: 160 actacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 101
Query: 62 taatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaa 121
||||||||||||| | ||||| | | ||||||||||| |||||||||||| || |||
Sbjct: 100 taatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaa 41
Query: 122 tgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 134/147 (91%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| ||||||| | |||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||||||||| |||||||||||||||| ||||||||| ||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 135 bits (68), Expect = 2e-31
Identities = 122/140 (87%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||| | | || |||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacatccatattgatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||| | ||||||||||||| | ||||||||||||| ||||| |||||||
Sbjct: 72 tagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaatactagaat 131
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacgga 151
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 186 bits (94), Expect = 6e-47
Identities = 135/149 (90%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||||| ||||||| ||||| |||||||||||| |||||||| ||||||||||||||
Sbjct: 154 actactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgc 95
Query: 62 taatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaa 121
|||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 94 taatgaatctagacatatat------ctagattcattagcatcaatatgaatgtgggaaa 41
Query: 122 tgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacgga 12
Score = 145 bits (73), Expect = 2e-34
Identities = 123/140 (87%), Gaps = 6/140 (4%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | |||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| |||| | ||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 72 tagatatatgt------ctagattcattagcatcaatatgaatgtaggaaatgctagaat 125
Query: 131 gacttacattgtgaaacgga 150
|||||| |||||||||||||
Sbjct: 126 gacttatattgtgaaacgga 145
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 184 bits (93), Expect = 2e-46
Identities = 135/149 (90%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||||| ||||||| | |||||||||||||| | |||||| | |||||||||||||
Sbjct: 160 actactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatgg 101
Query: 62 taatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaa 121
||||||||||||||||||||| |||||||||||||||| | ||||||||||||| ||||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaa 41
Query: 122 tgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacgga 12
Score = 143 bits (72), Expect = 8e-34
Identities = 129/148 (87%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||||| | |||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| | ||||| | ||||||||||||| ||||||||||||||| ||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 124 ctagaatgacttacattgtgaaacggaa 151
| |||||||||||||| ||||||||||
Sbjct: 125 gtggaatgacttacattatgaaacggaa 152
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 182 bits (92), Expect = 1e-45
Identities = 134/148 (90%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||||| |||||| | ||||||| ||||| |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 63
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaat 123
Query: 123 gctagaatgacttacattgtgaaacgga 150
| ||||||||||||||||||||||||||
Sbjct: 124 gttagaatgacttacattgtgaaacgga 151
Score = 141 bits (71), Expect = 3e-33
Identities = 128/147 (87%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| | | |||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| | | ||||| | ||||||||||||| |||| |||||||||| ||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 180 bits (91), Expect = 4e-45
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||||||||||||||||| |||||| | |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacgga 151
Score = 127 bits (64), Expect = 5e-29
Identities = 121/140 (86%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| ||||| | |||||||| | |||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttctcacattcatatattagttaatgaatc 92
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||| | ||||||||||||| |||||||||||||||| |||||| ||||||
Sbjct: 91 tagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgatagaat 32
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 178 bits (90), Expect = 2e-44
Identities = 136/150 (90%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||||| ||||||| |||||||||||||||||| |||||| ||||| ||||| |||
Sbjct: 160 aactactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatg 101
Query: 61 ctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaa 120
||||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||
Sbjct: 100 ttaatgaatctagatatatattc-tatctagattcattaccatcaatatgaatgtgagaa 42
Query: 121 atgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||| ||||||||
Sbjct: 41 atgctagaatgacttacattgcgaaacgga 12
Score = 111 bits (56), Expect = 3e-24
Identities = 120/140 (85%), Gaps = 1/140 (0%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||||||||||||||| ||||| | ||||||||||||| |||||||||
Sbjct: 12 tccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | | ||| ||||||||||||||| || ||||| ||| || |||||| ||||||
Sbjct: 72 tagataga-atatatatctagattcattaacattaatataaatatgggaaatgttagaat 130
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 131 gacttacattgtgaaacgga 150
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 174 bits (88), Expect = 2e-43
Identities = 127/140 (90%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||||||||||||| | |||||| | ||| ||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 72 tagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatgctagaat 131
Query: 131 gacttacattgtgaaacgga 150
|||||||||||||| |||||
Sbjct: 132 gacttacattgtgatacgga 151
Score = 135 bits (68), Expect = 2e-31
Identities = 128/148 (86%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||| | |||||||||||||||||| |||||| | |||||||||||| |
Sbjct: 159 ctactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatt 100
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||||| | ||||| | ||||||||||||| |||||||| |||||| |||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
|| | |||||||||||||||||||||||
Sbjct: 39 gcaaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 174 bits (88), Expect = 2e-43
Identities = 133/148 (89%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||||| |||||| | ||| |||||| || |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtt 63
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaat 123
Query: 123 gctagaatgacttacattgtgaaacgga 150
|||||||||||||| |||||| ||||||
Sbjct: 124 gctagaatgacttatattgtggaacgga 151
Score = 109 bits (55), Expect = 1e-23
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| |||||| ||||| |||||||||||| |||| | |||||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| | | ||||| | ||||||||||||| | |||||| |||||| ||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 172 bits (87), Expect = 9e-43
Identities = 133/147 (90%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| ||||| | | ||||||||||||| ||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa-a 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||| ||||||||||| |||||||
Sbjct: 38 ctagaataacttacattgtaaaacgga 12
Score = 133 bits (67), Expect = 8e-31
Identities = 128/147 (87%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||||||||||||||| |||||| | ||||| | |||||||||||| ||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| | ||||| | ||||||||||||| ||||||||||||||| ||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||
Sbjct: 124 ttagaatgacttacattgtgaaacgga 150
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 168 bits (85), Expect = 1e-41
Identities = 133/148 (89%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||| | |||||| ||||||||||||||| |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||||||||||||| |||| |||||| |||| |||||||| ||||| |||||
Sbjct: 64 aatgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaat 121
Query: 123 gctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||||
Sbjct: 122 gctagaatgacttacattgtgaaacgga 149
Score = 121 bits (61), Expect = 3e-27
Identities = 127/148 (85%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||||| ||||| | ||| ||||||||| |
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtt 100
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
||| |||||| | | ||||| | ||||||||||||| |||||||||||| || |||||
Sbjct: 99 aataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
||| ||||||||||||||||||||||||
Sbjct: 39 gcttgaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 168 bits (85), Expect = 1e-41
Identities = 133/149 (89%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||||| ||||||| ||||| ||||||||| || |||||| | ||| |||||||||
Sbjct: 160 actactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatgg 101
Query: 62 taatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaa 121
||||||||||||| ||||||| |||||||||||||||| |||||||||||||| ||||
Sbjct: 100 taatgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaa 41
Query: 122 tgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacgga 12
Score = 127 bits (64), Expect = 5e-29
Identities = 121/140 (86%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | ||||||||||| | |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||| | ||||||||||||| |||||||| |||||| ||||| ||| |||
Sbjct: 72 tagatagatatatatttctagattcattaccatcaatattaatgtgggaaattctaaaat 131
Query: 131 gacttacattgtgaaacgga 150
|||||| |||||||||||||
Sbjct: 132 gacttagattgtgaaacgga 151
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 168 bits (85), Expect = 1e-41
Identities = 133/148 (89%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||| | |||||| ||||||||||||||| |
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||||||||||||| |||| |||||| |||| |||||||| ||||| |||||
Sbjct: 97 aatgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacgga 12
Score = 121 bits (61), Expect = 3e-27
Identities = 127/148 (85%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||||| ||||| | ||| ||||||||| |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtt 61
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
||| |||||| | | ||||| | ||||||||||||| |||||||||||| || |||||
Sbjct: 62 aataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaat 121
Query: 123 gctagaatgacttacattgtgaaacgga 150
||| ||||||||||||||||||||||||
Sbjct: 122 gcttgaatgacttacattgtgaaacgga 149
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 168 bits (85), Expect = 1e-41
Identities = 133/149 (89%)
Strand = Plus / Plus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||||| ||||||| ||||||||||||||| || ||| || | |||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgt 62
Query: 62 taatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaa 121
||||||||||||||||||||| |||||||||||||||| || |||||||||||| ||||
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaa 122
Query: 122 tgctagaatgacttacattgtgaaacgga 150
||||| ||||||||| |||||||||||||
Sbjct: 123 tgctaaaatgacttatattgtgaaacgga 151
Score = 127 bits (64), Expect = 5e-29
Identities = 121/140 (86%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| ||||||||| || |||||| | ||||||||| ||| |||||||||
Sbjct: 151 tccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatc 92
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||| | ||||||||||||| ||||||||||||||| | ||||||| |||
Sbjct: 91 tagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgctataat 32
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacgga 12
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 167 bits (84), Expect = 6e-41
Identities = 132/148 (89%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| ||||||||||||||| || ||||| | || ||||||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgct 100
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||||||||||||| | ||||||||||||| ||| | |||||||||| |||||
Sbjct: 99 aatgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacgga 12
Score = 143 bits (72), Expect = 8e-34
Identities = 123/140 (87%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | ||||||| | || |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||||| ||||| | |||||||||||||| ||||||||| ||||||||||||||| |||
Sbjct: 72 tagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatgctaaaat 131
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacgga 151
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 133/150 (88%)
Strand = Plus / Minus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||||| ||||||| |||||||||||||||||| |||||| | |||||||||||||
Sbjct: 161 aactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 102
Query: 61 ctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaa 120
||||||||||||||||||||| || ||| ||| |||| ||| |||||||||||| ||
Sbjct: 101 ttaatgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaa 42
Query: 121 atgctagaatgacttacattgtgaaacgga 150
|||||| |||||||||||||||||||||||
Sbjct: 41 atgctataatgacttacattgtgaaacgga 12
Score = 117 bits (59), Expect = 5e-26
Identities = 125/147 (85%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||||||||||||| || |||| | | ||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|| ||| ||| | ||||| | ||||||||||||| ||||||||||||||| ||||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 133/150 (88%)
Strand = Plus / Minus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||||| ||||||| |||||||||||||||||| ||| | | ||||||||| |||
Sbjct: 161 aactactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatg 102
Query: 61 ctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaa 120
||||||||||||||||||||| |||||||||||||||| | |||||||||||| |||
Sbjct: 101 ttaatgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaa 42
Query: 121 atgctagaatgacttacattgtgaaacgga 150
|||||| |||||||||||||||||||||||
Sbjct: 41 atgctaaaatgacttacattgtgaaacgga 12
Score = 119 bits (60), Expect = 1e-26
Identities = 120/140 (85%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||||||||||||| || |||||| | ||||||||| || |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||| | ||||||||||||| || |||||||||||| |||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattaacattaatatgaatgtggagaatgctagaat 131
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 159 bits (80), Expect = 1e-38
Identities = 133/150 (88%), Gaps = 3/150 (2%)
Strand = Plus / Minus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||||| ||||||| | |||||||||||||| | |||||| | |||||||||||||
Sbjct: 158 aactactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatg 99
Query: 61 ctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaa 120
| |||| |||||||| |||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 98 ccaatggatctagac---tatatctatctagattcattagtatcaatatgaatgtgggaa 42
Query: 121 atgctagaatgacttacattgtgaaacgga 150
|| ||||||||||||| |||||||||||||
Sbjct: 41 atactagaatgacttatattgtgaaacgga 12
Score = 123 bits (62), Expect = 8e-28
Identities = 121/140 (86%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| |||||||||||| ||||||| | |||||||||||| ||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagtatttcccacattcatattgatactaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||| ||||||| |||| | ||||||||||||||| |||||| | ||||
Sbjct: 72 tagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatggtggaat 128
Query: 131 gacttacattgtgaaacgga 150
|||||||||| |||||||||
Sbjct: 129 gacttacattatgaaacgga 148
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 159 bits (80), Expect = 1e-38
Identities = 135/153 (88%), Gaps = 4/153 (2%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||||| ||||||| |||||||||||||||||| |||||| | ||||||| |||||
Sbjct: 164 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgt 105
Query: 62 taatgaatctagacatatatacctatctagattcattagtatca----atatgaatgtga 117
||||||||||||||||||||| |||||||||||||||| |||| ||||||| ||
Sbjct: 104 taatgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgc 45
Query: 118 gaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacgga 12
Score = 125 bits (63), Expect = 2e-28
Identities = 124/144 (86%), Gaps = 4/144 (2%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatat----tgatgctaatg 66
||||||| |||||||||||||||||| ||||| ||||||||| ||||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgatgttaatg 71
Query: 67 aatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgcta 126
|||||||| | ||||| | ||||||||||||| |||| |||||||||| |||||||||
Sbjct: 72 aatctagatagatatatatgtctagattcattaacatcactatgaatgtgggaaatgcta 131
Query: 127 gaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||
Sbjct: 132 gaatgacttacattgtgaaacgga 155
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 157 bits (79), Expect = 6e-38
Identities = 131/147 (89%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||||| | ||||||||||||| ||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| |||||| || | |||||||||||| ||||||||||||||| ||||||
Sbjct: 97 atgaatctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 147 bits (74), Expect = 5e-35
Identities = 126/141 (89%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | ||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 71 tag-acatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaa 129
||| ||||| ||| | | ||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 72 tagcacatacata--tgtttagattcattaacatcaatatgaatgtgggaaatgctagaa 129
Query: 130 tgacttacattgtgaaacgga 150
|||||||||||||||||||||
Sbjct: 130 tgacttacattgtgaaacgga 150
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 155 bits (78), Expect = 2e-37
Identities = 102/110 (92%)
Strand = Plus / Minus
Query: 26 aagtcattctattatttcctatattcatattgatgctaatgaatctagacatatatacct 85
||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||| ||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 86 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgactt 135
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 107 bits (54), Expect = 5e-23
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 26 aagtcattctattatttcctatattcatattgatgctaatgaatctagacatatatacct 85
||||||||||| ||||| | ||||||||||||| ||||||||||||| | ||||| |
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 86 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgactt 135
||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 132/150 (88%)
Strand = Plus / Plus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||||| ||||||| | |||||||||||||||| ||| ||||||||||||| ||||
Sbjct: 2 aactactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatg 61
Query: 61 ctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaa 120
||||||||||||||||| | | ||||||||||||||| ||| ||||||||||||| |
Sbjct: 62 ttaatgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagca 121
Query: 121 atgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||| |||||||||
Sbjct: 122 ttgctagaatgacttacattatgaaacgga 151
Score = 79.8 bits (40), Expect = 1e-14
Identities = 115/140 (82%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||||||||||| | | | | |||||||| |||| |||||||||
Sbjct: 151 tccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatc 92
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| |||| | | ||||||||||||| ||| |||||||| | | |||||||||||
Sbjct: 91 tagatatatgtctatgtctagattcattaacatctatatgaatataggcaatgctagaat 32
Query: 131 gacttacattgtgaaacgga 150
|||||||||| |||||||||
Sbjct: 31 gacttacattatgaaacgga 12
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 153 bits (77), Expect = 9e-37
Identities = 119/132 (90%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 19 acaatgtaagtcattctattatttcctatattcatattgatgctaatgaatctagacata 78
|||||||||||||||||| |||| ||| ||||||||||||| |||||||| ||||||||
Sbjct: 20 acaatgtaagtcattctagcattttctacattcatattgatgttaatgaatgtagacata 79
Query: 79 tatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttaca 138
|||| | ||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 80 tata--tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 137
Query: 139 ttgtgaaacgga 150
||||| ||||||
Sbjct: 138 ttgtggaacgga 149
Score = 143 bits (72), Expect = 8e-34
Identities = 129/147 (87%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| |||||| |||||||||||||||||| |||||| | ||||||||||||| ||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||||||||| | |||| |||||||| |||||||||||||| |||||
Sbjct: 96 atgaatctagacatatata--tgtctacattcattaacatcaatatgaatgtagaaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtggaacgga 12
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 151 bits (76), Expect = 3e-36
Identities = 124/140 (88%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||| | |||| |||||||| ||||||||||||| | | ||||||||||
Sbjct: 72 tagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatgctagaat 131
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacgga 151
Score = 149 bits (75), Expect = 1e-35
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| || | | ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||| ||||||| |||| |||||||||||||||| |||||||||||| | ||||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| || ||||| | | || ||||||||| ||| ||||||||||| |||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacgga 151
Score = 117 bits (59), Expect = 5e-26
Identities = 125/147 (85%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| | | |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||| || ||||||||| | |||||||||||| ||| |||||||| | |||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||||||||||| |||| | | |||||||| ||||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||| |||||||||
Sbjct: 125 gtagaatgacttacattatgaaacgga 151
Score = 125 bits (63), Expect = 2e-28
Identities = 126/147 (85%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||||||||||| |||| | || |||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| | ||||| | |||||||||||| | ||| ||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| ||||| | ||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||||||||| | | |||||||||||| ||| |||||||| || | ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 143 bits (72), Expect = 8e-34
Identities = 123/140 (87%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| ||| || |||||||||| |||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattacccatattcatatggatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||| ||||| | ||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 72 tagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatgctagaat 131
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacgga 151
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||||||||||| |||| | | |||||||| ||||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||||||||| |||||||||||||||| ||| ||||| |||||| ||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||
Sbjct: 125 ctagaatgacttacattatgaaacgga 151
Score = 125 bits (63), Expect = 2e-28
Identities = 126/147 (85%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||||||||||| ||||| | || ||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| | ||||| | |||||||||||| | ||| ||||||||||| |||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 131/150 (87%)
Strand = Plus / Minus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||||| ||||||| | |||||||||||||||| ||| ||||||||||||| ||||
Sbjct: 161 aactactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatg 102
Query: 61 ctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaa 120
||||||||||||| ||| | | ||||||||||||||| ||| ||||||||||||| |
Sbjct: 101 ttaatgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagca 42
Query: 121 atgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||| |||||||||
Sbjct: 41 ttgctagaatgacttacattatgaaacgga 12
Score = 87.7 bits (44), Expect = 4e-17
Identities = 116/140 (82%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||||||||||| | | | | |||||||| |||| |||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| |||| | ||||||||||||||| ||| |||||||| | | |||||||||||
Sbjct: 72 tagatatatgtctatatctagattcattaacatctatatgaatataggcaatgctagaat 131
Query: 131 gacttacattgtgaaacgga 150
|||||||||| |||||||||
Sbjct: 132 gacttacattatgaaacgga 151
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 130/149 (87%)
Strand = Plus / Plus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||| | ||||||| ||||| |||||||||||| ||| | | ||||||||| |||
Sbjct: 3 actacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgt 62
Query: 62 taatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaa 121
||||||||||||| | ||||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 63 taatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaa 122
Query: 122 tgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||||||||||||
Sbjct: 123 tgctagaatgacttatattgtgaaacgga 151
Score = 133 bits (67), Expect = 8e-31
Identities = 127/147 (86%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| |||||||||||| |||||| | |||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| ||||||| ||||||||||||||| || |||||||||||| ||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||| |||||||||||||
Sbjct: 38 ttagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 145 bits (73), Expect = 2e-34
Identities = 129/149 (86%), Gaps = 9/149 (6%)
Strand = Plus / Plus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||| | ||||||| |||||||||||||||||| |||||| | |||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 62 taatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaa 121
|||||||||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 63 taatgaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaa 113
Query: 122 tgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||
Sbjct: 114 tgctagaatgacttacattgtgaaacgga 142
Score = 135 bits (68), Expect = 2e-31
Identities = 127/148 (85%), Gaps = 9/148 (6%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||||| |||||| | ||||||||||||| |
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||||| | ||||||||||||| ||||||||||||||| |||||
Sbjct: 90 aatgaatctagaa---------tgtctagattcattaacatcaatatgaatgtgggaaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 145 bits (73), Expect = 2e-34
Identities = 124/140 (88%), Gaps = 2/140 (1%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| |||||||||||| |||||| | || ||||||||| |||||||||
Sbjct: 149 tccgtttcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaatc 90
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
| ||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 89 tggacatatg--cctatctagattcattaacatcaatatgaatgtgggaaatgctagaat 32
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacgga 12
Score = 119 bits (60), Expect = 1e-26
Identities = 126/147 (85%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||||| | ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| | ||| | || |||||||||| |||||||| || ||| ||||||
Sbjct: 65 atgaatctagataggcata--tgtccagattcattaacatcaatataaacgtgggaaatg 122
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||| |||||||||||||
Sbjct: 123 ctagaatgacttatattgtgaaacgga 149
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 129/148 (87%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||||| ||||| | || ||||||||| |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtt 63
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||||| | ||||| | ||||||||||||| |||||||||||||||| |||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 123
Query: 123 gctagaatgacttacattgtgaaacgga 150
|||||||| ||||||||||||||||||
Sbjct: 124 actagaatgtcttacattgtgaaacgga 151
Score = 143 bits (72), Expect = 8e-34
Identities = 131/148 (88%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||| ||||||| ||||||| | |||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaat-gtgagaaat 122
||||||||||||||||||| |||||||||||||||| |||||||| | |||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatttctagtga-aaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 39 actagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 129/148 (87%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| |||||| ||||| |||||||||||| ||||| |||||||||||||||||
Sbjct: 159 ctactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgct 100
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||| ||||||||| ||||||| ||||||||| |||||||||||| || ||||
Sbjct: 99 aatgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
||||||||||||| | |||| ||||||
Sbjct: 39 actagaatgacttatactgtggaacgga 12
Score = 131 bits (66), Expect = 3e-30
Identities = 111/126 (88%)
Strand = Plus / Plus
Query: 25 taagtcattctattatttcctatattcatattgatgctaatgaatctagacatatatacc 84
|||||||||||| ||||| | |||||||||||||||||||||||| |||| | |||||
Sbjct: 26 taagtcattctagtattttccatattcatattgatgctaatgaatttagatagatatata 85
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
| | |||||||||||| |||||||||||| ||||||||| |||||||||||| ||||||
Sbjct: 86 tgtttagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtgg 145
Query: 145 aacgga 150
||||||
Sbjct: 146 aacgga 151
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 128/147 (87%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| | | ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||||| |||||| | ||||||||||||| ||| ||||||||||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacatacattgtgaaacgga 12
Score = 135 bits (68), Expect = 2e-31
Identities = 122/140 (87%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||| ||||||||| ||| | | |||||||| ||||||||||||||
Sbjct: 12 tccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||| |||||||| ||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 72 taggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatgctagaat 131
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacgga 151
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 128/147 (87%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||| ||||||||||| ||| ||||| | |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||||||| |||| ||| ||||||||| | ||| ||||||||||| ||||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacgga 151
Score = 133 bits (67), Expect = 8e-31
Identities = 127/147 (86%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||||| | |||||||| |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| | ||||||| | ||||||||||||| ||| ||||||||||||||||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|| ||||||||||| |||||||||||
Sbjct: 38 ataaaatgacttacaatgtgaaacgga 12
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 128/147 (87%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| |||| ||||||| |||| | ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||||||||| |||||||||||||||| || |||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||| ||||||||| |||||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacgga 12
Score = 119 bits (60), Expect = 1e-26
Identities = 120/140 (85%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| ||||||||| || |||||| | ||||||||| ||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||| | ||||||||||||| |||||||| ||||||| ||||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgctagaat 131
Query: 131 gacttacattgtgaaacgga 150
| |||| |||||||||||||
Sbjct: 132 ggcttatattgtgaaacgga 151
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 122/140 (87%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| ||||| | ||||||||||||| ||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatc 92
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||||||||||| | |||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 91 tagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctagaat 32
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacgga 12
Score = 123 bits (62), Expect = 8e-28
Identities = 120/140 (85%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| || || | ||||||||||| ||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||||||| ||| | |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 72 tagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaat 131
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 139 bits (70), Expect = 1e-32
Identities = 100/110 (90%)
Strand = Plus / Plus
Query: 26 aagtcattctattatttcctatattcatattgatgctaatgaatctagacatatatacct 85
||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||| ||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 86 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgactt 135
|| ||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 107 bits (54), Expect = 5e-23
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 26 aagtcattctattatttcctatattcatattgatgctaatgaatctagacatatatacct 85
||||||||||| |||||| | ||||||||||||| ||||||||||| | | ||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 86 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgactt 135
||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 137 bits (69), Expect = 5e-32
Identities = 122/140 (87%), Gaps = 6/140 (4%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||||||||||||||||| |||||| | ||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||||||| || |||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 72 tagacat------ctgtctagattcattgacatcaatatgaatgtgggaaatgctagaat 125
Query: 131 gacttacattgtgaaacgga 150
|||||||||| |||||||||
Sbjct: 126 gacttacattatgaaacgga 145
Score = 121 bits (61), Expect = 3e-27
Identities = 126/148 (85%), Gaps = 6/148 (4%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| | |||||||||||||||| |||||| | |||||||||||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtc 94
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||||||| || | ||||||||||| ||||||||||||||| |||||
Sbjct: 93 aatgaatctagacagatgt------ctagattcattgacatcaatatgaatgtgggaaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
| ||||||||||||||||||||||||||
Sbjct: 39 gatagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 127/147 (86%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||| |||||||||| | |||||| | ||| ||||||||| |
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
||| |||||||||| ||||||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaacgga 151
Score = 95.6 bits (48), Expect = 2e-19
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||| |||||||||| || |||||| | ||| ||||||||| |||||||||
Sbjct: 151 tccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaatc 92
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | | ||| | ||||||||||| | |||||||| |||||| ||||||| | |||
Sbjct: 91 tagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatgcaaaaat 32
Query: 131 gacttacattgtgaaacgga 150
||||||| ||||||||||||
Sbjct: 31 gacttactttgtgaaacgga 12
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 129 bits (65), Expect = 1e-29
Identities = 122/140 (87%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| ||||||||||| |||||| | ||||||| | ||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaatt 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||||||||||| ||||||||||||||| || | ||||||||||| ||||||||||||
Sbjct: 72 tagacatatata--tatctagattcattaacatgagtatgaatgtgaaaaatgctagaat 129
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 130 gacttacattgtgaaacgga 149
Score = 103 bits (52), Expect = 7e-22
Identities = 124/147 (84%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| | ||||||| | ||| ||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| ||||||| | |||| |||||||| || | |||||||||| ||||||
Sbjct: 96 atgaatctagatatatata--tgtctaaattcattaacatgagtatgaatgtgggaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
| ||||||||||| |||||||||||||
Sbjct: 38 ccagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||||| |||||| | |||||||||||||||| |||||| | |||||||| | ||
Sbjct: 3 actactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgt 62
Query: 62 taatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaa 121
||||||||||||| ||||||| | ||||||||||||| | | ||||||||||| |||
Sbjct: 63 taatgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaa 122
Query: 122 tgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacgga 151
Score = 127 bits (64), Expect = 5e-29
Identities = 127/148 (85%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| | | |||||||| | || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||||||| |||| ||||||||||||||| | | ||||||||||| ||||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 124 ctagaatgacttacattgtgaaacggaa 151
|||||||||||||||| || |||||||
Sbjct: 38 ttagaatgacttacattatggaacggaa 11
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 123 bits (62), Expect = 8e-28
Identities = 65/66 (98%)
Strand = Plus / Minus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tatctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtga 18
Query: 145 aacgga 150
||||||
Sbjct: 17 aacgga 12
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 87 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| ||||| | |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 64 atgaatctaga 74
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 119 bits (60), Expect = 1e-26
Identities = 125/147 (85%), Gaps = 6/147 (4%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| ||||||||| || |||| | | ||| ||||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| |||||| ||| ||||||||| |||||| | |||||||||||||
Sbjct: 92 atgaatctagagatatat------ctaaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||| |||||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacgga 12
Score = 89.7 bits (45), Expect = 1e-17
Identities = 116/140 (82%), Gaps = 6/140 (4%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||||||||||||| || ||||| | ||| | ||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaatgaatt 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| |||| | ||||||||||||| |||||||| |||||| |||||||| |||
Sbjct: 72 tagatatatct------ctagattcattagcatcaatataaatgtggaaaatgctaaaat 125
Query: 131 gacttacattgtgaaacgga 150
|||||| |||||||||||||
Sbjct: 126 gacttatattgtgaaacgga 145
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 119 bits (60), Expect = 1e-26
Identities = 118/139 (84%), Gaps = 10/139 (7%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | ||| ||||| ||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||||||||||| ||||||| ||||||||||||||| |||||||||||||
Sbjct: 72 tagacatatata----------ttcattaacatcaatatgaatgtgggaaatgctagaat 121
Query: 131 gacttacattgtgaaacgg 149
|||||||||||||||||||
Sbjct: 122 gacttacattgtgaaacgg 140
Score = 101 bits (51), Expect = 3e-21
Identities = 117/139 (84%), Gaps = 10/139 (7%)
Strand = Plus / Minus
Query: 12 ccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatct 71
|||||| |||||||||||||||||| |||||| | ||||||||||||| ||||||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat-- 83
Query: 72 agacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaatg 131
||||| | ||||||||||||| || ||||| |||||| ||||||||||||||
Sbjct: 82 ------atata--tgtctagattcattaacattaatataaatgtgggaaatgctagaatg 31
Query: 132 acttacattgtgaaacgga 150
|||||||||||||||||||
Sbjct: 30 acttacattgtgaaacgga 12
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 120/140 (85%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||||| ||||| |||| || | |||||||| |||| |||||||||
Sbjct: 12 tccgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||||||||||| | ||||||||||||| ||| |||||||| |||| ||||||||||
Sbjct: 72 tagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatgctagaaa 131
Query: 131 gacttacattgtgaaacgga 150
| |||||||| |||||||||
Sbjct: 132 gtcttacattatgaaacgga 151
Score = 107 bits (54), Expect = 5e-23
Identities = 126/150 (84%)
Strand = Plus / Minus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||||| ||||||| | |||||||| | ||||| ||| | |||||||||| ||||
Sbjct: 161 aactactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatg 102
Query: 61 ctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaa 120
||||||||||||||| ||||| | ||||||||||||| ||| ||||||||||| | |
Sbjct: 101 ttaatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggca 42
Query: 121 atgctagaatgacttacattgtgaaacgga 150
|| |||||| |||||||||| |||||||||
Sbjct: 41 atactagaaagacttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 117 bits (59), Expect = 5e-26
Identities = 124/148 (83%), Gaps = 12/148 (8%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| | ||||| |||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| | ||||||||||||| ||||||||||||||||||||||
Sbjct: 86 atgaatctaca------------tctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 124 ctagaatgacttacattgtgaaacggaa 151
||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaa 11
Score = 93.7 bits (47), Expect = 7e-19
Identities = 115/140 (82%), Gaps = 12/140 (8%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| ||||| | ||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||||||||| ||||||||| ||| || ||||||||||||
Sbjct: 72 taga------------tgtagattcattaatatcaatataaatatggaaaatgctagaat 119
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 120 gacttacattgtgaaacgga 139
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 125/147 (85%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||||||||||| ||| || |||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||| | || |||||| |||||||| ||| ||||| ||||| | ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacgga 12
Score = 87.7 bits (44), Expect = 4e-17
Identities = 116/140 (82%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||||||||||| ||| || | || ||||| |||| ||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaatt 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| ||| || | ||||||||||||| ||| |||||||| || | |||||||||||
Sbjct: 72 tagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatgctagaat 131
Query: 131 gacttacattgtgaaacgga 150
|||||||||| |||||||||
Sbjct: 132 gacttacattatgaaacgga 151
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 125/147 (85%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||||||||||| ||||||||||||||||| || | ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||| | | ||||| | |||||||||| || || ||||||||||| ||||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||
Sbjct: 125 ctagaatgacttacattatgaaacgga 151
Score = 115 bits (58), Expect = 2e-25
Identities = 124/146 (84%)
Strand = Plus / Minus
Query: 5 actccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaa 64
||||| ||||||| | |||||||||||||||| |||||| | |||||||| || | ||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 65 tgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgc 124
|||||||||||||||||| |||| |||||||| || || |||||||| | |||||||
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 125 tagaatgacttacattgtgaaacgga 150
|||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 117 bits (59), Expect = 5e-26
Identities = 123/147 (83%), Gaps = 13/147 (8%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||||||||||| ||||| ||||||||||||||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||||||||| |||||||||| |||||||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatctagat-------------tatgaatgtgggaaatg 111
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||||| |||||||
Sbjct: 112 ctagaatgacttacattgtaaaacgga 138
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 115 bits (58), Expect = 2e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 86 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 145
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
Query: 146 acggaa 151
||||||
Sbjct: 16 acggaa 11
Score = 85.7 bits (43), Expect = 2e-16
Identities = 114/140 (81%), Gaps = 12/140 (8%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| ||||| | ||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| | ||||||||||| ||||||||| ||| || |||||||| |||
Sbjct: 72 taga------------tgtagattcattaatatcaatataaatatggaaaatgctataat 119
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 120 gacttacattgtgaaacgga 139
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 115 bits (58), Expect = 2e-25
Identities = 124/144 (86%), Gaps = 9/144 (6%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| ||||||||| || |||||| ||||||||||||||| ||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||||||||||| ||||||||||||||| || || |||||| ||||||
Sbjct: 89 atgaatctagacatatat--ctatctagattcatt------aacatcaatgtgggaaatg 38
Query: 124 ctagaatgacttacattgtgaaac 147
|||||| |||||||||||||||||
Sbjct: 37 ctagaa-gacttacattgtgaaac 15
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/97 (87%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 54 attgatgctaatgaatctagacatatatacctatctagattcattagtatcaatatgaat 113
||||||| ||||||||||||| | ||||| | ||||||||||||| ||||||||||||
Sbjct: 48 attgatgttaatgaatctagatagatata--tgtctagattcattaacatcaatatgaat 105
Query: 114 gtgagaaatgctagaatgacttacattgtgaaacgga 150
|| ||||||||| ||||||||| |||||||||||||
Sbjct: 106 atgggaaatgctaaaatgacttatattgtgaaacgga 142
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 113 bits (57), Expect = 7e-25
Identities = 119/140 (85%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||| | ||||||||||||||| |||
Sbjct: 145 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt------atc 92
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||||||||| || ||||||| | |||||| ||| ||||||||||| ||||||||||||
Sbjct: 91 tagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatgctagaat 32
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 3e-15
Identities = 121/148 (81%), Gaps = 6/148 (4%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||||| |||| | | |||||||| |||| |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtt 63
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
||||| | |||| | ||| | | ||||||| ||| |||||||||| || ||||
Sbjct: 64 aatgagtttagatagatacatatgtctagatacat------caatatgaatatggaaaat 117
Query: 123 gctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||||
Sbjct: 118 gctagaatgacttacattgtgaaacgga 145
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 119/140 (85%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
|||||||||||||||||| | || || |||| |||| |||||| | |||| ||||||||
Sbjct: 12 tccgttttacaatgtaagactttttaatattgcctacattcatttagatgttaatgaata 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||||||||| ||| | | ||||||||||| ||| ||||| ||||||| ||||||||||
Sbjct: 72 tagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatgctagaaa 131
Query: 131 gacttacattgtgaaacgga 150
| ||||||||||||||||||
Sbjct: 132 gtcttacattgtgaaacgga 151
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 109 bits (55), Expect = 1e-23
Identities = 122/147 (82%), Gaps = 13/147 (8%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| | ||||||||||||||| ||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||| ||||||| |||| |||||||| |||||||||||||
Sbjct: 85 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacgga 12
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaa 134
Query: 147 cgga 150
||||
Sbjct: 135 cgga 138
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 84 ctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtg 143
|||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 54 ctatctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtg 113
Query: 144 aaacgga 150
|||||||
Sbjct: 114 aaacgga 120
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 118 gaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacgga 12
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| |||||||||||| ||||| | ||||||||||||| |||||||||
Sbjct: 120 tccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaatc 61
Query: 71 taga 74
||||
Sbjct: 60 taga 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 107 bits (54), Expect = 5e-23
Identities = 122/147 (82%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||||||| ||||| || |||| ||| ||| ||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||| |||| |||||||||||||| |||||||||||||||| |||||
Sbjct: 86 atgaatttaga------------tctagattcattagcatcaatatgaatgtgaaaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||| |||||||||||||||||||
Sbjct: 38 ctagaataacttacattgtgaaacgga 12
Score = 75.8 bits (38), Expect = 2e-13
Identities = 118/147 (80%), Gaps = 12/147 (8%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||||||||| |||||| |||| | ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||| ||||| ||||||||| |||||||| ||||| |||||
Sbjct: 65 atgaatctag------------atctaaattcattagcatcaatataaatgtagaaaatg 112
Query: 124 ctagaatgacttacattgtgaaacgga 150
||| ||||| |||||||||||||||||
Sbjct: 113 ctaaaatgatttacattgtgaaacgga 139
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 107 bits (54), Expect = 5e-23
Identities = 122/147 (82%), Gaps = 12/147 (8%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||| ||||| ||||||||| |||||||||||||| |||||
Sbjct: 65 atgaatctag------------atctaaattcattagcatcaatatgaatgtagaaaatg 112
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||| |||||||||||||||||
Sbjct: 113 ctagaatgatttacattgtgaaacgga 139
Score = 107 bits (54), Expect = 5e-23
Identities = 122/147 (82%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||||||| |||||||| |||| ||| ||||||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||| |||| |||||||||||||| |||||||| ||| ||| ||||
Sbjct: 86 atgaatttaga------------tctagattcattagcatcaatataaatatgaaaaata 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 43 tatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatga 102
Query: 145 aacgga 150
||||||
Sbjct: 103 aacgga 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||||||||||| |||||| | |||||||||||| |||||||||
Sbjct: 108 tccgtttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaatc 49
Query: 71 tagacatat 79
|||| ||||
Sbjct: 48 tagatatat 40
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 121 atgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattcta 36
||||||| ||||||| ||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 90 agattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgg 149
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 150 a 150
|
Sbjct: 128 a 128
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 94 tcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaac 15
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| |||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 128 tccgtttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaatc 69
Query: 71 t 71
|
Sbjct: 68 t 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| || |||| || ||||||||||||||| ||||| | |||||||||||||||
Sbjct: 4 ctactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgct 63
Query: 63 aatga 67
|||||
Sbjct: 64 aatga 68
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| | |||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 137 ctactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgct 78
Query: 63 aatgaatctagac 75
|||||||||||||
Sbjct: 77 aatgaatctagac 65
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||||||||| |||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 66 tctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaa 125
Query: 147 cgga 150
||||
Sbjct: 126 cgga 129
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||| | ||||||| ||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatgc 62
Query: 62 ta 63
||
Sbjct: 63 ta 64
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 105 bits (53), Expect = 2e-22
Identities = 118/140 (84%), Gaps = 6/140 (4%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||| | | ||||||||||||| |||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt------atc 65
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||||||||| || ||||||| | |||||| ||||||||||||||| ||| ||||||||
Sbjct: 66 tagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaaggctagaat 125
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 126 gacttacattgtgaaacgga 145
Score = 89.7 bits (45), Expect = 1e-17
Identities = 122/148 (82%), Gaps = 6/148 (4%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||||| ||| | | ||||||||||||| |
Sbjct: 153 ctactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtt 94
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
||||| | |||| | ||| | | ||||||| ||| ||||||||||||| ||||
Sbjct: 93 aatgagtttagatagatacatatgtctagatacat------caatatgaatgtggaaaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 105 bits (53), Expect = 2e-22
Identities = 123/147 (83%), Gaps = 7/147 (4%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| |||||||||||||||||||| | ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||| ||| | ||| || || ||||||| |||||||| |||||| |||||
Sbjct: 65 atgaaactacatctattta-------agtttcattaacatcaatataaatgtgggaaata 117
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 118 ctagaatgacttacattgtgaaacgga 144
Score = 81.8 bits (41), Expect = 3e-15
Identities = 116/140 (82%), Gaps = 7/140 (5%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| ||||||| | ||| ||||||||| ||||||| |
Sbjct: 144 tccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgttaatgaaac 85
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
| || ||| || ||| ||||||| ||||||||||||||| ||||| ||||||
Sbjct: 84 t-----taaatag--atgtagtttcattaacatcaatatgaatgtgggaaataatagaat 32
Query: 131 gacttacattgtgaaacgga 150
|||||| |||||||||||||
Sbjct: 31 gacttatattgtgaaacgga 12
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 103 bits (52), Expect = 7e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 91 gattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 91 gattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | ||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 71 tagacatata 80
||||||||||
Sbjct: 72 tagacatata 81
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | ||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 71 tagacatatatac 83
|||||||||||||
Sbjct: 72 tagacatatatac 84
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 60 tctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 119
Query: 147 cgga 150
||||
Sbjct: 120 cgga 123
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacgga 12
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | ||||||||| | ||||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttcccacattcatattagtactaatgaatc 64
Query: 71 tagacatatat 81
|||||||||||
Sbjct: 63 tagacatatat 53
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 147 cgga 150
||||
Sbjct: 125 cgga 128
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | ||||||||| || |||||||||
Sbjct: 128 tccgtttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaatc 69
Query: 71 tagacatatata 82
||||||||||||
Sbjct: 68 tagacatatata 57
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 105 aatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatatt 56
|||||| ||| ||| |||||||||||||||||| |||||| | |||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 88 ctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 148 gga 150
|||
Sbjct: 14 gga 12
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||||||||||||| || |||||| | |||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatc 71
Query: 71 tag 73
|||
Sbjct: 72 tag 74
Score = 73.8 bits (37), Expect = 6e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 95 cattagtatcaatatgaatgtgagaaatgctaga-atgacttacattgtgaaacgga 150
|||||| ||||||||||||||| ||||||||| | ||||||||||||||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacgga 136
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 101 bits (51), Expect = 3e-21
Identities = 98/116 (84%), Gaps = 12/116 (10%)
Strand = Plus / Minus
Query: 25 taagtcattctattatttcctatattcatattgatgctaatgaatctagacatatatacc 84
|||||||||||| ||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatatat--- 48
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacatt 140
||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 47 ---------tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgactta 136
|||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 55 tctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 122/148 (82%), Gaps = 12/148 (8%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| || |||| |||||||||||||||||| |||||| | ||||||||||||| |
Sbjct: 147 ctactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||| ||||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 87 aatgaaactagacata------------gattcattaacatcaatatgaatgtggaaaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
|||||||||||||||||| |||||||||
Sbjct: 39 gctagaatgacttacattatgaaacgga 12
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 76 tctagtttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 135
Query: 147 c 147
|
Sbjct: 136 c 136
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 123/147 (83%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||||||||||| ||| || | |||||||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||||||| | || |||||| |||||||| ||| |||| ||||| | ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||
Sbjct: 125 ctagaatgacttacattatgaaacgga 151
Score = 79.8 bits (40), Expect = 1e-14
Identities = 115/140 (82%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||||||||||| ||| || | || |||| |||| ||||||||
Sbjct: 151 tccgtttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaatt 92
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| ||| || | ||||||||||||| ||| |||||||||| | |||||||||||
Sbjct: 91 tagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatgctagaat 32
Query: 131 gacttacattgtgaaacgga 150
|||||||||| |||||||||
Sbjct: 31 gacttacattatgaaacgga 12
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||| | ||||| |||| || |||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||||||||||| | | |||| |||||||| ||| |||||||| || | | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||| | ||||||| ||||||||||
Sbjct: 38 ctagaaagtcttacatggtgaaacgga 12
Score = 77.8 bits (39), Expect = 4e-14
Identities = 120/147 (81%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| || ||||||| | ||||| || | || |||||||||| |||| ||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||| |||||| ||| | ||||||||||||| ||| |||||||| || | |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||| | ||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||| | ||||| |||| || | |||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||||||||||| | | |||| |||||||| ||| |||||||| || | | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||| | ||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacgga 12
Score = 93.7 bits (47), Expect = 7e-19
Identities = 122/147 (82%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||| | ||||| || | || |||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||| |||||| ||| | ||||||||||||| ||| ||||||||||| | |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||| | ||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 88 ctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 148 gga 150
|||
Sbjct: 134 gga 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||||||||||||| || |||||| | |||||||||||||||||||||||
Sbjct: 136 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatc 77
Query: 71 tag 73
|||
Sbjct: 76 tag 74
Score = 73.8 bits (37), Expect = 6e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 95 cattagtatcaatatgaatgtgagaaatgctaga-atgacttacattgtgaaacgga 150
|||||| ||||||||||||||| ||||||||| | ||||||||||||||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 84 ctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtg 143
|||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 63 ctatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtg 122
Query: 144 aaacgga 150
|||||||
Sbjct: 123 aaacgga 129
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||||| | ||||||||||||| ||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 64 atgaatctaga 74
|||||||||||
Sbjct: 76 atgaatctaga 66
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 101 tatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 61 tatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
||||||| |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 149 ga 150
||
Sbjct: 118 ga 119
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| | |||||||||||||||| ||||| |||||||||||||| |
Sbjct: 127 ctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatt 68
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 67 aatgaatcta 58
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 105 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
|||||||||||||||| || |||||||||||| ||||||||||||||||||| |||||||
Sbjct: 60 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 119
Query: 145 aacgga 150
||||||
Sbjct: 120 aacgga 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 101 tatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 tatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| |||||||||||| |||||| | ||||||||| ||||||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 64 atgaatctaga 74
|||||||||||
Sbjct: 72 atgaatctaga 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
||||||| |||||||||||||||||| |||||| | ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/149 (83%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||| | ||||||| ||||||||||||||| || |||||| | |||||| | ||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgt 62
Query: 62 taatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaa 121
||||||||| ||||||||||| || |||||||||| ||| |||||||||||| |||
Sbjct: 63 taatgaatcaagacatatatatgcat--agattcattaacatctatatgaatgtgaaaaa 120
Query: 122 tgctagaatgacttacattgtgaaacgga 150
||||| |||||||| |||| |||||||||
Sbjct: 121 tgctaaaatgacttgcattatgaaacgga 149
Score = 87.7 bits (44), Expect = 4e-17
Identities = 89/103 (86%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||| ||||||||||| |||||||| | ||| ||||||||| ||| |
Sbjct: 112 attcatatagatgttaatgaatctatgcatatata--tgtcttgattcattaacatctac 55
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
|||||||||||||||| || |||||||||||| ||||||||||||||||||| |||||||
Sbjct: 77 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 18
Query: 145 aacgga 150
||||||
Sbjct: 17 aacgga 12
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 101 tatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 76 tatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 125
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| |||||||||||| |||||| | ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 64 atgaatctaga 74
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
||||||| |||||||||||||||||| |||||| | ||||||||||||
Sbjct: 125 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/150 (83%)
Strand = Plus / Minus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||||| ||||||| |||||||||| | || || ||| || | ||||| || ||||
Sbjct: 161 aactactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatg 102
Query: 61 ctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaa 120
||||||||||||| |||||| | ||||||||||||| ||| ||||||||||||| |
Sbjct: 101 ttaatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagca 42
Query: 121 atgctagaatgacttacattgtgaaacgga 150
||||||| | | ||||||||||||||||||
Sbjct: 41 atgctaggaagtcttacattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 3e-15
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||||| ||||||| |||||||||| | | ||| ||| | | |||||||| ||||
Sbjct: 3 actactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgt 62
Query: 62 taatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaa 121
||||||||||||||| | ||| ||||||||||||||| ||| || |||||||| | ||
Sbjct: 63 taatgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaa 122
Query: 122 tgctagaatgacttacattgtgaaacgga 150
|| || || | ||||||||||||||||||
Sbjct: 123 tgttaaaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 97.6 bits (49), Expect = 4e-20
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 127
Query: 147 cgga 150
||||
Sbjct: 128 cgga 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| |||||||||||||||||| ||||| | |||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 64 atgaatctagaca 76
|||||||||||||
Sbjct: 79 atgaatctagaca 67
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 69 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 128
Query: 147 cgga 150
||||
Sbjct: 129 cgga 132
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 90 agattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgg 149
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 150 a 150
|
Sbjct: 12 a 12
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 82 atcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacgga 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | ||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatc 71
Query: 71 t 71
|
Sbjct: 72 t 72
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 97.6 bits (49), Expect = 4e-20
Identities = 116/140 (82%), Gaps = 15/140 (10%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | ||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|| ||| ||||||||||||||| |||||||||| ||||||||||||
Sbjct: 72 taaaca--------tatctagattcattaacatcaatatga-------aaatgctagaat 116
Query: 131 gacttacattgtgaaacgga 150
||||||||||||||||||||
Sbjct: 117 gacttacattgtgaaacgga 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Query: 149 ga 150
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 64 atgaatctagaca 76
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 74 acatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgac 133
||||||||| |||||||||||||||| |||||||| ||| |||||||| ||||||||||
Sbjct: 88 acatatatatctatctagattcattatcatcaatataaatatgagaaatactagaatgac 29
Query: 134 ttacattgtgaaacgga 150
||| |||||||||||||
Sbjct: 28 ttatattgtgaaacgga 12
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| |||||||||||| |||||| ||||| ||||||||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagtatttctcatatttatattgatgataatgaatc 71
Query: 71 taga 74
||||
Sbjct: 72 taga 75
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 118 gaaatgctagaatgacttacattgtgaaacgga 150
||||||||| ||||||||||||| |||||||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacgga 121
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 97.6 bits (49), Expect = 4e-20
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
|||||| | ||||||| |||||||||||||||||| ||||| | |||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 121 atgctagaatgacttacattgtgaaacgga 150
|||||||| |||||||||||||||||||||
Sbjct: 75 atgctagattgacttacattgtgaaacgga 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcattcta 36
|||||||| ||||||| ||||||||||||| ||||
Sbjct: 113 actactccctccgtttcacaatgtaagtcaatcta 79
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 86 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 145
|||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaa 17
Query: 146 acgga 150
|||||
Sbjct: 16 acgga 12
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 64 atgaatctaga 74
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 86 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 145
|||||||||||||| |||||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 69 atctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaa 128
Query: 146 acgga 150
|||||
Sbjct: 129 acgga 133
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/148 (83%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| ||||| |||||||||||| ||| || | |||| ||| ||| ||
Sbjct: 157 ctactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatact 98
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
||||||||||| || ||||| | || |||||||||| ||| ||||||||||| | |||
Sbjct: 97 aatgaatctagccacatata--tgtccagattcattaacatctatatgaatgtgggcaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
|||||||||||||| ||| |||||||||
Sbjct: 39 gctagaatgacttatattatgaaacgga 12
Score = 97.6 bits (49), Expect = 4e-20
Identities = 118/140 (84%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | ||| |||||||||||| ||| || | |||||||| |||| |||||||||
Sbjct: 12 tccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
| ||||||||| | ||||||||||||||||| ||| ||||||| | ||| |||||||
Sbjct: 72 tggacatatatg--tggctagattcattagtatctataagaatgtgggcaatcctagaat 129
Query: 131 gacttacattgtgaaacgga 150
|||||| |||||||||||||
Sbjct: 130 gacttatattgtgaaacgga 149
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||||||||| |||||||| ||| |||||||||||| |||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaatc 71
Query: 71 tagacatata 80
||||||||||
Sbjct: 72 tagacatata 81
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 84 atcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacgga 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| ||||||||| || |||| | | ||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatgcta 80
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 91 gattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 91 gattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 80 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 128
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||||| | ||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatc 71
Query: 71 tagaca 76
||||||
Sbjct: 72 tagaca 77
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| ||||||| | |||||||||||||||| |||||| | |||||||||||||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatg 79
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||| | ||||| ||| || | ||||| || ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcccacattcacatagatgctaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||||| ||||| ||| ||||||||||| ||| ||||||||| | | ||||||||||
Sbjct: 72 tagacacatataagtatatagattcattaacatctatatgaatgcgggcaatgctagaaa 131
Query: 131 gacttacattgtgaaacgga 150
| ||||||||||||||||||
Sbjct: 132 gtcttacattgtgaaacgga 151
Score = 77.8 bits (39), Expect = 4e-14
Identities = 120/147 (81%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||| | ||||| ||| || |||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| | | |||| | |||||||||||||| ||| || |||||||| | ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||| | |||||||| |||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||||||||||| |||||| | ||||||||||||| |||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagtatttctcacattcatattgatgttaatgaatc 71
Query: 71 tagacatatat 81
|||||| ||||
Sbjct: 72 tagacaaatat 82
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 105 aatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaa 119
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||||| ||||||| |||||||||||||||||| |||| | | |||||||||||||
Sbjct: 2 aactactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
Query: 61 ctaatgaatctaga 74
|||||||||||||
Sbjct: 62 ttaatgaatctaga 75
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 111 aatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||| |||||| ||||||||||| |||| |||||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacgga 127
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 77 tctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136
Query: 147 cgga 150
||||
Sbjct: 137 cgga 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||||||||||||| || |||||| | ||||||||||||| ||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 64 atgaatctagaca 76
|||||||||||||
Sbjct: 87 atgaatctagaca 75
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 122/147 (82%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||| | ||||| ||| || | |||||| | |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||||||||| || | | ||||||||||| || ||||| ||||| | ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||| | ||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacgga 12
Score = 75.8 bits (38), Expect = 2e-13
Identities = 122/150 (81%)
Strand = Plus / Plus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| | ||||||| |||||||||| | ||||| ||| || | || ||||| |||
Sbjct: 2 aactacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatg 61
Query: 61 ctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaa 120
||||||||||| ||| ||| | | |||||||||||||| ||| | |||||| || | |
Sbjct: 62 ttaatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggca 121
Query: 121 atgctagaatgacttacattgtgaaacgga 150
||||||||| | ||||||||||||||||||
Sbjct: 122 atgctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 93 ttcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 139
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 149 ga 150
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 92 attcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacgga 119
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| | ||||||| |||||||||||||||||| |||||| | ||||||||||||
Sbjct: 129 aactacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgata 70
Query: 61 ctaatgaat 69
||||||||
Sbjct: 69 ttaatgaat 61
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattcta 36
|||||| ||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 93.7 bits (47), Expect = 7e-19
Identities = 109/132 (82%), Gaps = 12/132 (9%)
Strand = Plus / Minus
Query: 19 acaatgtaagtcattctattatttcctatattcatattgatgctaatgaatctagacata 78
||||| |||||||||||| |||| ||||||||||||||||| |||||||||||||
Sbjct: 131 acaatataagtcattctagcatttactatattcatattgatgttaatgaatctaga---- 76
Query: 79 tatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttaca 138
||||||||||||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 75 --------tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttaca 24
Query: 139 ttgtgaaacgga 150
|| |||||||||
Sbjct: 23 ttatgaaacgga 12
Score = 77.8 bits (39), Expect = 4e-14
Identities = 119/148 (80%), Gaps = 12/148 (8%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| | ||||||||||||| || |||||| | ||||||||||||| |
Sbjct: 4 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 63
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
||||||||||| |||||||||||||| |||||||||||| | ||||
Sbjct: 64 aatgaatctag------------atctagattcattaacatcaatatgaatatagtaaat 111
Query: 123 gctagaatgacttacattgtgaaacgga 150
|||||||||||||| |||||| ||||||
Sbjct: 112 gctagaatgacttatattgtggaacgga 139
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 84 ctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtg 143
||||||||||| |||| |||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 72 ctatctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtg 131
Query: 144 aaacgga 150
|||||||
Sbjct: 132 aaacgga 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 119/147 (80%), Gaps = 13/147 (8%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| ||||| ||||| ||||||||| ||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|| |||||||| | || || ||||| ||||||||||||||| ||||||
Sbjct: 85 ataaatctagatagatctatctatc-------------atcaatatgaatgtgggaaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||| |||||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 122/147 (82%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | ||||||||||||| || ||| || | |||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| |||||| | ||||||||||||||| ||| ||||| || || | || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacgga 12
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/150 (82%)
Strand = Plus / Plus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| | ||||||| | |||||||||||||||| || || |||| ||||| ||||
Sbjct: 2 aactacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatg 61
Query: 61 ctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaa 120
||||||||||||| ||| | | | | ||||||||||| ||| ||||||||||| | |
Sbjct: 62 ttaatgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggca 121
Query: 121 atgctagaatgacttacattgtgaaacgga 150
|||||| ||||||||||||| |||||||||
Sbjct: 122 atgctaaaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 93.7 bits (47), Expect = 7e-19
Identities = 109/132 (82%), Gaps = 12/132 (9%)
Strand = Plus / Minus
Query: 19 acaatgtaagtcattctattatttcctatattcatattgatgctaatgaatctagacata 78
|||||||||||||||||| |||||| | ||||||||||||| ||||| |||||
Sbjct: 131 acaatgtaagtcattctagcatttcccacattcatattgatgttaatgtatcta------ 78
Query: 79 tatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttaca 138
||||||||| ||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 77 ------tatctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttaca 24
Query: 139 ttgtgaaacgga 150
||||||||||||
Sbjct: 23 ttgtgaaacgga 12
Score = 91.7 bits (46), Expect = 3e-18
Identities = 120/147 (81%), Gaps = 12/147 (8%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| | | ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||| ||||||| ||| |||| |||| ||||||||||||||| ||||||
Sbjct: 65 atgtatctagatatagatac------------attaacatcaatatgaatgtgggaaatg 112
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||| ||||||
Sbjct: 113 ctagaatgacttacattgtggaacgga 139
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 88 ctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 148 gga 150
|||
Sbjct: 122 gga 124
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||||||||||||||||| |||| | |||||||||||||||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 64 atgaatctag 73
||||||||||
Sbjct: 71 atgaatctag 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| ||||||||| |||||||||||| |||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 122/147 (82%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||| | ||||| ||| || | |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||||||| || ||| |||||| ||||| ||| ||||||||||| | ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||| || | |||||||| |||||||||
Sbjct: 38 ctataaagtcttacattatgaaacgga 12
Score = 77.8 bits (39), Expect = 4e-14
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| ||||||||| |||||| | ||||| | |||||||||||||| ||| ||
Sbjct: 49 attcatatagatgctaataaatctatatatataataatgtctagattcattagcatctat 108
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||| | |||| ||||| | ||||||||||||||||||
Sbjct: 109 atgaatgtgggcaatgttagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 93.7 bits (47), Expect = 7e-19
Identities = 109/132 (82%), Gaps = 12/132 (9%)
Strand = Plus / Plus
Query: 19 acaatgtaagtcattctattatttcctatattcatattgatgctaatgaatctagacata 78
||||| |||||||||||| |||| ||||||||||||||||| |||||||||||||
Sbjct: 20 acaatataagtcattctagcatttactatattcatattgatgttaatgaatctaga---- 75
Query: 79 tatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttaca 138
||||||||||||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 76 --------tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttaca 127
Query: 139 ttgtgaaacgga 150
|| |||||||||
Sbjct: 128 ttatgaaacgga 139
Score = 77.8 bits (39), Expect = 4e-14
Identities = 119/148 (80%), Gaps = 12/148 (8%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| | ||||||||||||| || |||||| | ||||||||||||| |
Sbjct: 147 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 88
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
||||||||||| |||||||||||||| |||||||||||| | ||||
Sbjct: 87 aatgaatctag------------atctagattcattaacatcaatatgaatatagtaaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
|||||||||||||| |||||| ||||||
Sbjct: 39 gctagaatgacttatattgtggaacgga 12
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 93.7 bits (47), Expect = 7e-19
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 104 caatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 caatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacgga 123
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatat 55
|||||| ||||||| |||||||||||||||||| |||| | ||||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaat 69
||||||| |||||||||||||||||| ||||| | |||||||||| || ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatgaat 70
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| || |||| |||||||||||||||||| |||||| | ||||||||||||| ||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 64 atgaatcta 72
|||||||||
Sbjct: 70 atgaatcta 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
||||||||||||||| |||||||| ||||||||| ||||||||||
Sbjct: 56 atcaatatgaatgtggaaaatgctataatgacttatattgtgaaac 11
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 64 atgaatctaga 74
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||
Sbjct: 77 tatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtga 18
Query: 145 aacgga 150
||||||
Sbjct: 17 aacgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaat 65
||||||| ||||| |||||||||||| ||||||||| ||||||||||||| ||||
Sbjct: 131 tccgtttcacaatataagtcattctactatttcctacattcatattgatgttaat 77
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||| ||||| |||||||||||| |||||||||||||
Sbjct: 83 atcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacgga 131
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 51 tatctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatga 110
Query: 145 aacgga 150
||||||
Sbjct: 111 aacgga 116
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||||| ||||||| | |||||||||||||||| |||||||| |||||||||||||
Sbjct: 125 actactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgt 66
Query: 62 taatgaatctaga 74
|||||||||||||
Sbjct: 65 taatgaatctaga 53
Score = 63.9 bits (32), Expect = 6e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 119 aaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgga 12
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 149 ga 150
||
Sbjct: 13 ga 12
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 117
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||||||||||| |||||| | |||||||| |||| |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatat 55
||||||| ||||||| |||||||||||||||||| |||||| | ||||||||
Sbjct: 125 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 65 tgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgc 124
||||||||||||||||||| || |||||||| || ||| |||| ||| ||||||||||
Sbjct: 97 tgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaatgc 38
Query: 125 tagaatgacttacattgtgaaacgga 150
|||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattatgaaacgga 12
Score = 71.9 bits (36), Expect = 3e-12
Identities = 117/144 (81%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||||||||||| ||||| ||||| |||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||| || |||| | |||||||||| || ||| | ||||||||| |||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 124 ctagaatgacttacattgtgaaac 147
||| ||||||||||||| ||||||
Sbjct: 125 ctacaatgacttacattatgaaac 148
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
|||||| ||| |||| ||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 77 tatctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtga 18
Query: 145 aacgga 150
||||||
Sbjct: 17 aacgga 12
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 101 tatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 80 tatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 129
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
|||||| ||||||| |||||||||||||||||| |||||| | ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgat 60
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
||||||| ||||| |||||||||||| |||||| | ||||||||||||
Sbjct: 129 tccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||||||
Sbjct: 63 tatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtga 122
Query: 145 aacgga 150
||||||
Sbjct: 123 aacgga 128
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| |||||||||||| |||||| | ||||||||||||| ||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 64 atgaatctaga 74
|||||||||||
Sbjct: 75 atgaatctaga 65
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacgga 12
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| ||||| |||||||||||| |||| | | |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcattttccacattcatattgatg 61
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
||||| ||||||||| ||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 62 tatcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtga 121
Query: 145 aacgga 150
||||||
Sbjct: 122 aacgga 127
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||||| | |||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacgga 12
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||||||||||||| || |||||| | ||||||||||||| |||||||||
Sbjct: 127 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaatc 68
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcatt 33
|||||||||||||| |||||||||||||||
Sbjct: 5 tactccatccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 149 ga 150
||
Sbjct: 132 ga 133
Score = 83.8 bits (42), Expect = 7e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 105 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| |||||||||||| |||||| | ||||||||||||| ||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 64 atgaatctagacatat 79
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 74 acatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgac 133
|||| |||| |||||||||||||||| ||||||||| | |||| |||||||| ||||||
Sbjct: 47 acatttatatctatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgac 106
Query: 134 ttacattgtgaaacgga 150
|||||||||||||||||
Sbjct: 107 ttacattgtgaaacgga 123
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcc 44
|||||| ||||||| ||||||||||||||| || |||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcc 45
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||| |||||| ||||| ||| ||||||||||||||| |||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacgga 12
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 89 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 137
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacgga 12
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 90 agattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgg 149
|||||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 150 a 150
|
Sbjct: 128 a 128
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 94 tcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| |||||||||||| |||||| | ||||| |||||| |||||||||
Sbjct: 128 tccgtttcacaatataagtcattctagcatttcccacattcacattgatattaatgaatc 69
Query: 71 t 71
|
Sbjct: 68 t 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 aactactccatccgttttacaatgtaagtcattcta 36
||||||||| ||||||| ||||| ||||||||||||
Sbjct: 2 aactactccctccgtttcacaatataagtcattcta 37
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatactagaatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
|||||| ||||||| |||||||||||||||||| |||||| | |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
|||||||| ||||||| ||||| || ||||||||||||| ||||||
Sbjct: 88 atcaatataaatgtgaaaaatgttaaaatgacttacattatgaaac 133
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 59 tctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 118
Query: 147 cgga 150
||||
Sbjct: 119 cgga 122
Score = 83.8 bits (42), Expect = 7e-16
Identities = 78/89 (87%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||||||||||| |||||| | ||||||||||||| ||||| |||
Sbjct: 122 tccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttaatggatc 63
Query: 71 tagacatatatacctatctagattcatta 99
||||||||||| |||||||||| |||||
Sbjct: 62 tagacatatat--ctatctagatccatta 36
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 87.7 bits (44), Expect = 4e-17
Identities = 122/147 (82%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||| | || || ||| | ||||||||| | |||| ||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||||||||| | | ||||||||||||| ||| ||||||||||| | ||||
Sbjct: 96 atgaatctagacatatgtg--tgtctagattcattaacatctatatgaatgtgggcaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||| |||||||||| |||||||||
Sbjct: 38 ctagaaagacttacattatgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 114/140 (81%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||||| ||||| ||| || | |||||||| |||| |||||||||
Sbjct: 12 tccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||||| | ||| | ||||||||||||| ||| | |||||| | || ||||||| ||
Sbjct: 72 tagacacacata--tgtctagattcattaacatctagatgaatataagcaatgctacaaa 129
Query: 131 gacttacattgtgaaacgga 150
| |||||||| |||||||||
Sbjct: 130 gtcttacattatgaaacgga 149
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 87.7 bits (44), Expect = 4e-17
Identities = 122/147 (82%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||| | ||||| ||| |||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||| ||||| | | ||||||||||||| || ||||||||||| ||||
Sbjct: 65 atgaatctag--gtatatgcgtgtctagattcattaacatttatatgaatgtggacaatg 122
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||| | |||||||| |||||||||
Sbjct: 123 ctagaaagtcttacattatgaaacgga 149
Score = 56.0 bits (28), Expect = 2e-07
Identities = 85/103 (82%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| ||| ||||||||||||||| ||| || |||||||||||| ||||||
Sbjct: 112 attcatataaatgttaatgaatctagacacgcata--tacctagattcattaacatcaat 55
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||| | | |||||||||| | |||||||| |||||||||
Sbjct: 54 atgaatataggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 116/140 (82%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||| | ||||| ||| || |||||||| | |||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||||||||| || ||| ||||||||||| ||| ||||| | ||| | ||| ||||||
Sbjct: 72 tagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaatactagaaa 131
Query: 131 gacttacattgtgaaacgga 150
| ||||||||||||||||||
Sbjct: 132 gtcttacattgtgaaacgga 151
Score = 69.9 bits (35), Expect = 1e-11
Identities = 119/147 (80%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||| | ||||| |||| || | | ||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| | | ||| | | ||||||||||||| ||| | |||||| || | ||||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||| | ||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 116/140 (82%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||| | ||||| ||| || | |||||||| |||| |||||||||
Sbjct: 151 tccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatc 92
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| |||||| | ||||||||||||| ||| ||||||||||||| ||||||| ||
Sbjct: 91 tagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatgctaaaaa 32
Query: 131 gacttacattgtgaaacgga 150
| |||||||| |||||||||
Sbjct: 31 gtcttacattatgaaacgga 12
Score = 85.7 bits (43), Expect = 2e-16
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||| ||||||||||||||| | ||| | ||||||||||||| ||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacacacatatatttctagattcattaacatctat 108
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||| | |||||||||| | |||||||| |||||||||
Sbjct: 109 atgaatgtgggcaatgctagaaagtcttacattatgaaacgga 151
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 116/140 (82%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||| | ||||| ||| || | |||||||| |||| |||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|||| |||||| | ||||||||||||| ||| ||||||||||||| ||||||| ||
Sbjct: 72 tagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctaaaaa 131
Query: 131 gacttacattgtgaaacgga 150
| |||||||| |||||||||
Sbjct: 132 gtcttacattatgaaacgga 151
Score = 85.7 bits (43), Expect = 2e-16
Identities = 88/103 (85%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||| ||||||||||||||| | ||| | ||||||||||||| ||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacacacatatatttctagattcattaacatctat 55
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||| | |||||||||| | |||||||| |||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 121/147 (82%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||| | ||||| ||| | |||| ||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| | ||||| || | ||||||||||||| | | | ||||||||| | ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||| | ||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacgga 12
Score = 63.9 bits (32), Expect = 6e-10
Identities = 113/140 (80%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||| | ||||| ||| || | |||||| | | || |||||||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcattacccacattcatttagttgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||||||| | || ||| ||||||||||| ||| ||||| || || ||||||||||
Sbjct: 72 tagacatgtgtatatatttagattcattaacatctatatgtatatggacaatgctagaaa 131
Query: 131 gacttacattgtgaaacgga 150
| ||||||||||||||||||
Sbjct: 132 gtcttacattgtgaaacgga 151
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 92 attcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacgga 107
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaat 69
||||||| |||||||||||||||||| |||||||| ||||||||||||| ||||||||
Sbjct: 107 tccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatgaat 49
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcat 53
|||||| ||||||| |||||||||||||||||| |||||| | ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 84 ctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtg 143
|||||||||||||||| |||||||| | |||| |||||||||||||||||||||||||
Sbjct: 57 ctatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtg 116
Query: 144 aaacgga 150
|||||||
Sbjct: 117 aaacgga 123
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttc 43
|||||| ||||||| |||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttc 44
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||| ||||||||||||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattcta 98
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 84 ctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtg 143
|||||||||||||||| |||||||||||||||| ||||| ||||||| |||||||| ||
Sbjct: 57 ctatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatg 116
Query: 144 aaacgga 150
|||||||
Sbjct: 117 aaacgga 123
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||| |||||||| |||| | ||||||||||||| |||||||||
Sbjct: 123 tccgtttcataatgtaagccattctatcatttttcacattcatattgatgttaatgaatc 64
Query: 71 taga 74
||||
Sbjct: 63 taga 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatat 55
|||||| ||||||| ||||| |||||||||||| |||||| | ||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
||||||||||||||||||||||||| ||| ||| |||||||| ||||| |||||||||||
Sbjct: 34 tatctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtga 93
Query: 145 aa 146
||
Sbjct: 94 aa 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 128 aatgacttacattgtgaaacgga 150
|||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||| ||| ||||||||| ||||| || |||| ||||| |||||||| |||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 64 atgaatctaga 74
|||||||||||
Sbjct: 46 atgaatctaga 36
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 101 tatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 81 tatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 84 ctatctagattcattagtatcaatatgaatgtgagaaatgctaga-atgacttacattgt 142
|||||||||||||||| ||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 79 ctatctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgt 20
Query: 143 gaaacgga 150
||||||||
Sbjct: 19 gaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
||||||| |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 130 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcat-tctattatttcctatattcatattgatgct 62
|||||| ||||||| |||||||||||| |||| |||||| | ||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 63 aatgaatctaga 74
||||||||||||
Sbjct: 65 aatgaatctaga 76
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 83.8 bits (42), Expect = 7e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 105 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 149 ga 150
||
Sbjct: 132 ga 133
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| |||||||||||| |||| | | ||||||||||||| ||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 64 atgaatctagacatat 79
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaat 65
||||||| |||||||||||||||||| |||||| | ||||||||| ||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat 66
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
|||||| ||| |||| ||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 77 tatctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtga 18
Query: 145 aacgga 150
||||||
Sbjct: 17 aacgga 12
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 101 tatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 80 tatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 129
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattcta 36
|||||| ||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
||||||| ||||| |||||||||||| |||||| | ||||||||||||
Sbjct: 129 tccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 149 ga 150
||
Sbjct: 124 ga 125
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| |||||||||||| || ||| | ||||||||||||| |||||||||
Sbjct: 125 tccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatc 66
Query: 71 tagacat 77
|| ||||
Sbjct: 65 taaacat 59
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| ||||||| |||||||||||||||||| |||| | | |||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||||||||| || |||||||||||||||||||||| |||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 149 ga 150
||
Sbjct: 13 ga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||| |||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 82 atcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacgga 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| |||||||||||| ||||| |||| |||||||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 93 ttcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacgga 12
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| | ||||||| |||||| ||||||||||| |||||| | |||||||||||||
Sbjct: 2 aactacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatg 61
Query: 61 ctaatgaa 68
|||||||
Sbjct: 62 ttaatgaa 69
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 83.8 bits (42), Expect = 7e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 105 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 aatataaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 120 aatgctagaatgacttacattgtgaaacggaa 151
|||||||||||||||||||||||| |||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaa 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattcta 37
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattcta 36
||||||| |||||| ||||||||||||||||||
Sbjct: 102 ctactccttccgttccacaatgtaagtcattcta 69
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| |||||| ||||||||||||||| || |||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 64 atgaatctagacat 77
||||||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacgga 125
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||||||||| |||||||| ||| || ||||||||| |||||||||||||||| ||
Sbjct: 75 tctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| |||||||||| ||||||| |||||| | |||||||||||||
Sbjct: 125 tccgtttcacaatgtaagacattctagcatttcccacattcatattgatg 76
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||||| ||||||| |||||||||||||||||| |||||| | |||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatgc 62
Query: 62 t 62
|
Sbjct: 63 t 63
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 113 tgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||| ||||||||||||||| ||||||||| |||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacgga 100
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattcta 36
|||||| ||||||||||||||||| ||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattcta 75
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
|||||| ||||||| |||||||||||||||||| |||||| | |||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatg 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatga 67
||||||| |||||||||||||||||| |||||| | |||||||| |||| ||||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatga 67
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 103 tcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
|||||| ||||||| ||||| |||||||||||| |||||| | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 44.1 bits (22), Expect = 6e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 2 actactccatccgtttt-acaatgtaagtcattctattatttcctatattcatattga 58
|||||| | |||||||| ||||| |||||||||||| |||||| | |||||||||||
Sbjct: 118 actacttcctccgttttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||| ||||||||||||| ||||||||||| | |||||||||| | ||||||||||||||
Sbjct: 56 tctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 115
Query: 147 cgga 150
||||
Sbjct: 116 cgga 119
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 118/144 (81%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | |||||||| | ||||| ||| || | |||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|||||||||| || | ||| | |||||||||||||||||| |||| |||||| | || |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 124 ctagaatgacttacattgtgaaac 147
|||||| | |||||||| ||||||
Sbjct: 38 ctagaaagtcttacattatgaaac 15
Score = 77.8 bits (39), Expect = 4e-14
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 52 atattgatgctaatgaatctagacatatatacctatctagattcattagtatcaatatga 111
|||| ||| ||||||||||||||||||||| | ||||||||||||| || ||||||
Sbjct: 53 atatagatactaatgaatctagacatatatgtgtgcctagattcattagcatatatatga 112
Query: 112 atgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||| | |||||||||| | |||||||| |||||||||
Sbjct: 113 atgtgggcaatgctagaaagtcttacattatgaaacgga 151
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 84 ctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtg 143
||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||| ||
Sbjct: 78 ctatctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatg 19
Query: 144 aaac 147
||||
Sbjct: 18 aaac 15
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| ||||||||| ||||||||||||| |||||||||
Sbjct: 83 atcaatatgaatgtgggaaatgctacaatgacttacattatgaaacgga 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 25 taagtcattctattatttcctatattcatattgatgctaatgaatctaga 74
|||||||||||| |||| | | ||||||| |||||||||||||||||||
Sbjct: 26 taagtcattctagcattttccacattcatactgatgctaatgaatctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| ||||||| | ||||||||||||| || |||||| | |||||||||||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatg 82
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 115/140 (82%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||| | || || ||| || |||||||| | |||| |||||||||
Sbjct: 151 tccgtttcacaatgtaagactttttagcattgcccatattcatttagatgttaatgaatc 92
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||||||||| || | | ||||||||||| || ||||| || |||| ||||||||||
Sbjct: 91 tagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatgctagaaa 32
Query: 131 gacttacattgtgaaacgga 150
| ||||||||||||||||||
Sbjct: 31 gtcttacattgtgaaacgga 12
Score = 61.9 bits (31), Expect = 2e-09
Identities = 118/147 (80%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||| | ||||| ||| | |||| ||||| || | ||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||||||| ||| ||| | | ||||||||||||| ||| | |||||| || | ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
||| || | ||||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 79.8 bits (40), Expect = 1e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 100 gtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 68 gtatcaatatgaatgtggnaaatgctagaataacttacattgtgaaacgga 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 100 gtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 62 gtatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
||||||| ||||||| ||||||||||| |||||| |||| | | ||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
|||||| ||||||| ||||||||||| |||||| |||| | | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 107 tatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 117 agaaatgctagaatgacttacattgtgaaac 147
|||||||||||||||||||||||||||||||
Sbjct: 45 agaaatgctagaatgacttacattgtgaaac 15
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcata 54
||||||| |||||||||||||||||| |||||| | |||||||
Sbjct: 88 tccgtttcacaatgtaagtcattctagcatttcccacattcata 45
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 121/148 (81%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| |||||||||| | ||||| ||| ||||| | | || |||| |
Sbjct: 159 ctactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgtt 100
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||||||||||||| | | ||||||||||| ||| | ||||||||| | |||
Sbjct: 99 aatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggtaat 40
Query: 123 gctagaatgacttacattgtgaaacgga 150
||||||| | ||| |||| |||||||||
Sbjct: 39 gctagaaagtcttgcattatgaaacgga 12
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 103 tcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 107
Score = 73.8 bits (37), Expect = 6e-13
Identities = 47/49 (95%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 59 atcaatatgaatgtg-gaaatgctagaatgacttatattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattga 58
|||||| | ||||||| ||||| |||||||||||| |||||| | |||||||||||
Sbjct: 116 actacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
|||||| ||||||| ||||| |||||||||||| |||||| | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcc-acattcatattgat 59
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 84 ctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtg 143
||||||| |||||||| |||||||||||| || ||||| |||||||||||||||||||
Sbjct: 78 ctatctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtg 19
Query: 144 aaacgga 150
|||||||
Sbjct: 18 aaacgga 12
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||||||||| |||| | ||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacattttccatattcatattgatgttaatgaatg 71
Query: 71 taga 74
||||
Sbjct: 72 taga 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| ||| |||| ||| ||||||||||||| |||||||||
Sbjct: 81 atcaatatgaatatgaaaaatactaaaatgacttacattatgaaacgga 129
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
|||||| ||||||| | ||||||||||||| || ||||| |||||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 120/147 (81%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | ||| |||| | ||||| |||| || |||||||||| |||| ||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||| ||||| ||||| | | ||||||||||||| ||| ||||||||||| |||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 124
Query: 124 ctagaatgacttacattgtgaaacgga 150
||| || | ||||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacgga 151
Score = 69.9 bits (35), Expect = 1e-11
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||| |||||||||||||||||| || ||||||| ||||||| ||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctat 55
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||| || | ||| |||||| | |||| ||| |||||||||
Sbjct: 54 atgaatatgggcaatactagaaagtcttatattatgaaacgga 12
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 100 gtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 62 gtatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 100 gtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 68 gtatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 118
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
||||||| ||||||| ||||||||||| |||||| |||| | | ||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
|||||| ||||||| ||||||||||| |||||| |||| | | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 77.8 bits (39), Expect = 4e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 92 attcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 42/43 (97%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 64 atgaatgtga-aaatgctagaatgacttacattgtgaaacgga 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaat 69
||||||| |||||||||||||||||| |||| | | || |||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttc-acatccatattgatgttaatgaat 69
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||| ||||||||||||||||||
Sbjct: 105 tccgtttcacaatgtaagtcattcta 80
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 92 attcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| |||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 2 actactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgc 61
|||||| | ||||||| |||||||||||||||||| |||| | |||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 62
Query: 62 taatgaat 69
||||||||
Sbjct: 63 taatgaat 70
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| || |||||||||||||||||||||| |||||||||
Sbjct: 74 atcaatatgaatatggaaaatgctagaatgacttacattatgaaacgga 122
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| | |||||||||||||||| |||| | |||||||||||||||
Sbjct: 122 tccgtttcataatgtaagtcattctagcattttccatattcatattgatg 73
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 120/147 (81%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | ||| |||| | ||||| |||| || |||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
||||| ||||| ||||| | | ||||||||||||| ||| ||||||||||| |||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||| || | ||||||||||||||||||
Sbjct: 38 ctaaaaagtcttacattgtgaaacgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||| |||||||||||||||||| || ||||||| ||||||| ||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctat 108
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||| || | ||| |||||| | |||| ||| |||||||||
Sbjct: 109 atgaatatgggcaatactagaaagtcttatattatgaaacgga 151
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 92 attcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||| ||||||||||||||| ||||||||| |||||||| ||||||| ||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 19 acaatgtaagtcattctattatttcctatattcatattgatgctaatgaat 69
|||||| |||||||| || |||||| | ||||||||||||||||||||||
Sbjct: 99 acaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 92 attcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| |||||||| || |||| ||||||||||||||||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacgga 124
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 119 aaatgctagaatgacttacattgtgaaacgga 150
|||||||| |||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacgga 12
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcatt 33
|||||| ||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||| ||||||||||||||||||
Sbjct: 124 tccgtttcacaatgtaagtcattcta 99
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaac 113
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| || ||||| ||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacgga 12
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgat 59
||||||| || |||| |||||||||||||||||| | |||| | ||||||||||||
Sbjct: 124 ctactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
||||||||||||||| ||||||||||||||| ||||| |||| |||||||||| ||||
Sbjct: 58 tatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtga 117
Query: 145 aacgga 150
||||||
Sbjct: 118 aacgga 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgct 62
||||||| ||||||| || |||||||||| |||| |||| | | ||||||||||||| |
Sbjct: 131 ctactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtt 72
Query: 63 aatgaatctagacatatat 81
|||||||||||| ||||||
Sbjct: 71 aatgaatctagatatatat 53
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| |||||||||||| | |||||| ||||||||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacgga 12
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 105 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 112
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| || ||||||||||||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||| ||||||||| ||||| |||||||||||| |||||| |||||||||||||||
Sbjct: 4 ctactacatccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatatt 56
||||||| ||||| |||||||||||| |||||| | |||||||||
Sbjct: 112 tccgtttcacaatataagtcattctagcatttcccacattcatatt 67
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 78 atatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgactt 135
||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 86 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgactt 135
|||||||| ||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 50 atctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 105 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 93 ttcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||| |||| ||| |||||| ||||||||||||||||||| |||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacgga 114
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||| |||||||||||| |||||| | ||| ||| ||||| ||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 64 atgaa 68
|||||
Sbjct: 61 atgaa 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatatt 56
||||||| ||||||||||||||| || |||||| | |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| ||| |||||||||||| |||||||||||||||||||||||
Sbjct: 60 atcaatataaatatgagaaatgctaaaatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| ||| |||||||||||| ||||||||| |||||||||||||
Sbjct: 67 atcaatataaatatgagaaatgctaaaatgacttatattgtgaaacgga 115
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
|||||| ||||||| ||||||||||||||| || ||||| ||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatg 61
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgaaaaatactataatgacttacattgtgaaacgga 12
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 103 tcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||||| |||| ||||||||||||||||| |||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaa 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| ||||||| ||||||||||||||| || ||||| | |||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatg 61
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 73.8 bits (37), Expect = 6e-13
Identities = 79/93 (84%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| ||||| ||||||||||||||||||| | ||||||||||||| || ||
Sbjct: 93 attcatatagatgcaaatgaatctagacatatatgtgtgcctagattcattagcatagat 34
Query: 108 atgaatgtgagaaatgctagaatgacttacatt 140
||||||||| | |||||||||| | ||||||||
Sbjct: 33 atgaatgtgggcaatgctagaaagtcttacatt 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 77/93 (82%)
Strand = Plus / Plus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||||||||||||||| || | ||| | |||||||||||| | ||| ||
Sbjct: 28 attcatatctatgctaatgaatctaggcacacatatatgtctagattcatttgcatctat 87
Query: 108 atgaatgtgagaaatgctagaatgacttacatt 140
||||||||| | |||| ||||| | ||||||||
Sbjct: 88 atgaatgtgggcaatgttagaaagtcttacatt 120
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 91 gattcattagtatcaatatgaatgtgagaaatgctagaatgactt 135
|||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 91 gattcattagtatcaatatgaatgtgagaaatgctagaatga 132
|||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 26 aagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||||||| |||||| | |||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 29 tcattctattatttcctatattcatattgatgctaatgaatc 70
|||||||| |||||| | |||||||||||||||||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| |||||||||||||||||||||||||| ||||| |||||||
Sbjct: 38 atcaatataaatgtgagaaatgctagaatgacttatattgtaaaacgga 86
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||||||||| ||||||||||||
Sbjct: 86 tccgttttacaatataagtcattcta 61
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||| ||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 60 atcactatgaatgtgaaaaatgctagaatgacttacattatgaaacgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
|||||||||| |||| |||| |||||||||| ||||| ||||||||||||||||| |||
Sbjct: 72 tatctagatttattaacatcactatgaatgtgggaaatactagaatgacttacattatga 131
Query: 145 aac 147
|||
Sbjct: 132 aac 134
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 73.8 bits (37), Expect = 6e-13
Identities = 69/79 (87%), Gaps = 3/79 (3%)
Strand = Plus / Minus
Query: 49 ttcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaata 108
||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||
Sbjct: 76 ttcatattgatattaatgaatctagat---tatatctatctagattcattaatatcaata 20
Query: 109 tgaatgtgagaaatgctag 127
|||| ||| ||||||||||
Sbjct: 19 tgaacgtgggaaatgctag 1
Score = 73.8 bits (37), Expect = 6e-13
Identities = 69/79 (87%), Gaps = 3/79 (3%)
Strand = Plus / Plus
Query: 49 ttcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaata 108
||||||||||| ||||||||||||| | ||||| |||||||||||||| ||||||||
Sbjct: 16 ttcatattgatattaatgaatctagatagatata---atctagattcattaatatcaata 72
Query: 109 tgaatgtgagaaatgctag 127
|||| ||| ||||||||||
Sbjct: 73 tgaacgtgggaaatgctag 91
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 114 gtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||||||||||
Sbjct: 83 gtgagaaatgctagaatgacttacattgtgaaacgga 119
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||| |||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 60 atcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacgga 12
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||| ||||||||||||||||||
Sbjct: 119 tccgtttcacaatgtaagtcattcta 94
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||||| ||||||| | |||||||||||||||| |||| || |||| ||||| |||
Sbjct: 2 aactactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagata 61
Query: 61 ctaatgaatctagacatatat 81
|||||||||||||| |||||
Sbjct: 62 ttaatgaatctagacttatat 82
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| |||| ||||| || || | ||| |||||||||||||||| |||||
Sbjct: 75 tctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 120 aatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||| |||||||||
Sbjct: 99 aatgctagaatgacttacattatgaaacgga 129
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||||||| ||| | |||||||||||||||||
Sbjct: 73 atcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacgga 121
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||||||||||||| || |||| | | ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 64 atga 67
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 76 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 124
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| | ||||||| |||||||||||||||||| |||| | |||||||||||||||
Sbjct: 134 aactacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||||||||| |||||| |||| | | ||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatg-tt 63
Query: 64 atgaatctagacat 77
||||||||| ||||
Sbjct: 64 atgaatctaaacat 77
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgg 149
|||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 111 aatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacgga 142
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattcta 36
|||||| ||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattcta 36
|||||| ||||||| ||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattcta 117
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 56 atatgaatgtgagaaatgttagaatgacttacattatgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||||| |||||||||||||||| |||| | | |||| ||| |||| ||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 64 atgaatctagacatata 80
||||||||||||||||
Sbjct: 78 gtgaatctagacatata 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||||| || ||| ||| ||||||| ||||| |||||||||||||||| | |||
Sbjct: 68 tctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaa 127
Query: 147 cgga 150
||||
Sbjct: 128 cgga 131
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 86 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 145
|||||||||||||| || ||||||||| || ||||||||||| |||||||||||||||
Sbjct: 63 atctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaa 122
Query: 146 acgga 150
|||||
Sbjct: 123 acgga 127
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||||| ||||| |||| | ||||||||||| ||| |||||||||
Sbjct: 127 tccgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaatgaatc 68
Query: 71 taga 74
||||
Sbjct: 67 taga 64
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||| ||||| |||||||||||||||| |||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacgga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatat 55
|||||| ||||||| | ||||||||||||||||| |||| | | ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||| ||||||||||| | |||||||||| |||||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||||| ||||| ||| || | |||||||| |||| |||||||||
Sbjct: 12 tccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatc 71
Query: 71 tagacatata 80
||||||||||
Sbjct: 72 tagacatata 81
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||| ||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaa 121
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 21 aatgtaagtcattctattatttcctatattcatattgatgctaatgaatctagacatata 80
|||||||||||||||| ||| | | |||||||| |||| |||||||||||||||||||
Sbjct: 115 aatgtaagtcattctagcattgcacacattcatatagatgttaatgaatctagacatata 56
Query: 81 ta 82
||
Sbjct: 55 ta 54
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatat 55
|||||| ||||||| | |||||||||||||||| ||| |||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatat 56
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 120 aatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||| |||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 103 tcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||| || ||| |||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 120 aatgctagaatgacttacattgtgaaacggaa 151
||||||||||||||||| ||||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaa 98
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattcta 36
|||||| ||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 79 tatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttaca 138
|||| |||| ||||||||||| |||||||| | |||| |||||||||||| |||||||
Sbjct: 83 tatatctatatagattcattaacatcaatataattgtggaaaatgctagaataacttaca 24
Query: 139 ttgtgaaacgga 150
||||||||||||
Sbjct: 23 ttgtgaaacgga 12
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| ||||||||||| |||||| |||| | | | | ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcat 32
|||||||| ||||||| ||||||||||||||
Sbjct: 128 actactccctccgtttcacaatgtaagtcat 98
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 129 atgacttacattgtgaaacgga 150
||||||||||||||||||||||
Sbjct: 98 atgacttacattgtgaaacgga 119
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| ||||||||| || |||| | |||||||||||||| |||||||||
Sbjct: 125 tccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaatc 66
Query: 71 tagacatatata 82
||||||||||||
Sbjct: 65 tagacatatata 54
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| |||||||||||| | |||||||| ||||||||| |||||||||
Sbjct: 62 tctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaa 121
Query: 147 cgga 150
||||
Sbjct: 122 cgga 125
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 71.9 bits (36), Expect = 3e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| | || |||||||||||||||| |||| ||||||||||||||| | | ||
Sbjct: 19 attcatataggtgttaatgaatctagacatctatatatatctagattcattaacacctat 78
Query: 108 atgaatgtgagaaatgctagaatg 131
||||||||| |||||| |||||||
Sbjct: 79 atgaatgtgggaaatgttagaatg 102
Score = 67.9 bits (34), Expect = 4e-11
Identities = 85/102 (83%)
Strand = Plus / Minus
Query: 30 cattctattatttcctatattcatattgatgctaatgaatctagacatatatacctatct 89
||||||| |||||| | |||||||| | || ||||||||||||| ||||||| | |||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 90 agattcattagtatcaatatgaatgtgagaaatgctagaatg 131
|||||||||| | | ||||||||||| |||||||||||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||| |||||||| || |||||| ||||||||||||||| |||| ||||
Sbjct: 129 tccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaatc 70
Query: 71 tagacatatata 82
||||||| ||||
Sbjct: 69 tagacatttata 58
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||
Sbjct: 66 tctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaa 125
Query: 147 cgga 150
||||
Sbjct: 126 cgga 129
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 109 tgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| ||||| ||||||| |||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacgga 12
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcc 44
||||||| ||||||||||| |||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagttattctagtatttcc 45
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||| | || || |||| ||| |||||| | |||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagactttatagtattacctccattcatttagatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
|| |||||| || | |||||||| |||| ||| | ||| ||||| | ||||||||||
Sbjct: 72 taaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatgctagaaa 131
Query: 131 gacttacattgtgaaacgga 150
| ||||||||||||||||||
Sbjct: 132 gtcttacattgtgaaacgga 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 116/147 (78%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| |||||||||| | ||||| ||| || | || ||| | |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 64 atgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatg 123
|| |||||||||||||| | | | ||||||||||| ||| | ||||||| | |||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaata 39
Query: 124 ctagaatgacttacattgtgaaacgga 150
||| || | ||||||||||||||||||
Sbjct: 38 ctataaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||||||||||||||| ||||| |||||||||||| ||| |||||
Sbjct: 69 tctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaa 128
Query: 147 cgga 150
||||
Sbjct: 129 cgga 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | ||| |||||||||||| |||| | | ||||||||||||| |||||||||
Sbjct: 132 tccgtttcataatataagtcattctaacattttccacattcatattgatgttaatgaatc 73
Query: 71 tagacatata 80
||||||||||
Sbjct: 72 tagacatata 63
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||| || ||||||| |||||||||||||||||||||| |||||||||
Sbjct: 60 atcaacataaatgtgaaaaatgctagaatgacttacattatgaaacgga 12
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 3 ctactccatccgttttacaatgtaagtcattcta 36
||||||| ||||||| | ||||||||||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 112 atgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||| |||||||||||||||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 120 aatgctagaatgacttacattgtgaaacgga 150
||||||||||||| |||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacgga 88
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattcta 36
|||||| ||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 96 attagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||| ||||||||| ||||||| |||| |||||||||||| ||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacgga 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctat 37
|||||| ||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctat 38
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 125 tagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||||||||||||||||||||||||| | | ||| ||||||| ||| ||
Sbjct: 114 attcatatagatgctaatgaatctagacatatatatgtgtataggttcattaacatctat 55
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||| |||| | |||||||||| | |||| | | |||||||||
Sbjct: 54 atgattgtgggcaatgctagaaagtcttataatatgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 50 tcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaatat 109
|||||| |||| ||||||| ||| ||| ||||| | |||||||||||||| ||| ||||
Sbjct: 51 tcatatagatgttaatgaacctatacacatatatatgtctagattcattagcatctatat 110
Query: 110 gaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||| | |||||||||| | |||| | | |||||||||
Sbjct: 111 gaatgtgggcaatgctagaaagtcttataatatgaaacgga 151
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 84 ctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtg 143
|||| |||||| |||| |||||||| | |||| |||||||||||||||||||||||||
Sbjct: 66 ctatatagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtg 125
Query: 144 aaacgga 150
|||||||
Sbjct: 126 aaacgga 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 101 tatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||| | ||||| |||||||| |||||||||||||||||||
Sbjct: 61 tatcaatataattgtgaaaaatgctaaaatgacttacattgtgaaa 16
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcattcta 36
|||||||| ||||||| ||||||||||||||||||
Sbjct: 141 actactccctccgtttcacaatgtaagtcattcta 107
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 105 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacgga 102
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatatt 56
||||||| ||||||||||||||| || ||||||| | |||||||||
Sbjct: 102 tccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 128 aatgacttacattgtgaaacgga 150
|||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacgga 12
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcatt 33
|||||| ||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||| |||||||||||| || ||||| ||||||||||||||| || ||
Sbjct: 90 attcatatagatgttaatgaatctaggcacatatatatatctagattcattaacatatat 31
Query: 108 atgaatgtgagaaatgctagaa 129
||||||||| | ||||||||||
Sbjct: 30 atgaatgtgggcaatgctagaa 9
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| ||| ||||||||||||| ||||||| | |||||||||||| ||| ||
Sbjct: 25 attcatatatatgttaatgaatctagatatatatatgtgcctagattcattaacatctat 84
Query: 108 atgaatgtgagaaatgctagaa 129
||||||||| | ||||||||||
Sbjct: 85 atgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||||||||||||||| |||| ||| ||||||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 149 ga 150
||
Sbjct: 122 ga 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||| ||||||||| || ||||| | | ||||||||||||| |||||||||
Sbjct: 123 tccgtttcacaatataagtcattttagtattttccacattcatattgatgttaatgaatc 64
Query: 71 ta 72
||
Sbjct: 63 ta 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||| | | |||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
|||||| ||||||| ||||||||||||||| | ||||| | | |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatg 61
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||| |||||||||||||||||||| | ||||||||||||| ||| ||
Sbjct: 90 attcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatctat 31
Query: 108 atgaatgtgagaaatgctagaa 129
||||||||| | |||||||||
Sbjct: 30 atgaatgtgggtgatgctagaa 9
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||| ||||||||||||||| ||||| | |||||||||||| ||| ||
Sbjct: 25 attcatatagatgttaatgaatctagacacatatatatgtctagattcatttacatctat 84
Query: 108 atgaatgtgagaaatgctagaa 129
||||||||| | |||||||||
Sbjct: 85 atgaatgtgtgtgatgctagaa 106
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 118 gaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||||||
Sbjct: 50 gaaatgctagaatgacttacattgtgaaacgga 82
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 124 ctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattctattatttccta 46
||||||| |||||||||||||||||| ||||||||
Sbjct: 82 tccgtttcacaatgtaagtcattctagcatttccta 47
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 118 gaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 111 aatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||| ||||||||| ||| |||||||||
Sbjct: 45 aatgtgagaaatgctaaaatgacttatattatgaaacgga 84
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| ||||||||||||||| || ||||| | | ||||||||||||| |||| |||
Sbjct: 12 tccgtttcacaatgtaagtcattttagtattttccacattcatattgatgttaataaatt 71
Query: 71 tagacata 78
|| |||||
Sbjct: 72 tatacata 79
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 39 atttcctatattcatattgatgctaatgaatctagacatatata 82
|||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 6 atttcccacattcatattgatgctaatgaaactagacatatata 49
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 39 atttcctatattcatattgatgctaatgaatctagacatatata 82
|||||| | |||||||||||||||||| ||||||||||||||||
Sbjct: 111 atttcccacattcatattgatgctaataaatctagacatatata 68
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 58 atgctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtga 117
|||||||| || ||||||||||||| | |||||||| ||||| |||||||||||||||
Sbjct: 49 atgctaataaaactagacatatata--tgtctagatttattagcatcaatatgaatgtgg 106
Query: 118 gaaatg 123
||||||
Sbjct: 107 gaaatg 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatg 123
||||| |||||||| ||||||||||||||| ||||||
Sbjct: 41 tctagtttcattagcatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 63.9 bits (32), Expect = 6e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 119 aaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||||||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacgga 109
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 119 aaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||| ||||||||||||||
Sbjct: 43 aaatgctagaatgacttgcattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattcta 36
|||||| ||||||| ||||||||||||||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattcta 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 2 actactccatccgttttacaatgtaagtcattcta 36
|||||||| ||||||| |||||| |||||||||||
Sbjct: 3 actactccctccgtttcacaatgcaagtcattcta 37
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
|||||||||||| || | || |||| ||||||||||||| |||||||||||| ||| |||
Sbjct: 77 tatctagattcactaatttccatataaatgtgagaaatgttagaatgacttatattatga 18
Query: 145 aacg 148
||||
Sbjct: 17 aacg 14
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 112 atgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||| ||||||||||||||||||||||| |||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacgga 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 2 actactccatccgttttacaatgtaagtcattcta 36
|||||||| ||||||| | ||||||||||||||||
Sbjct: 130 actactccctccgtttcataatgtaagtcattcta 96
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 63.9 bits (32), Expect = 6e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 119 aaatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||||||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacgga 101
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||| | ||||||||| |||||||||||||||||||||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacgga 12
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcatt 33
|||||| ||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||| ||||||||||||||||||
Sbjct: 101 tccgtttcacaatgtaagtcattcta 76
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 107 tatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||| ||| ||||||| ||||||||||||| |||||||||||||
Sbjct: 88 atatggatgagagaaatcctagaatgacttatattgtgaaacgga 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattattt 42
||||||| |||||||||||||||||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagtattt 43
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 113/140 (80%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| | |||||||| | ||||| ||| ||| |||||||| |||| |||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgtctacattcatatagatgttaatgaatc 71
Query: 71 tagacatatatacctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 130
||||||||||| | | ||||||||||| ||| ||||||||||| || ||||||
Sbjct: 72 tagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaacctagaaa 131
Query: 131 gacttacattgtgaaacgga 150
| |||||||| |||||||||
Sbjct: 132 gtcttacattatgaaacgga 151
Score = 63.9 bits (32), Expect = 6e-10
Identities = 88/104 (84%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||| ||||||||||| ||| | ||| | ||||||||||||| ||| ||
Sbjct: 114 attcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacatctat 55
Query: 108 atgaatgtgaga-aatgctagaatgacttacattgtgaaacgga 150
|||||||| ||| |||||||||| | |||||||| |||||||||
Sbjct: 54 atgaatgt-agacaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||| | |||||||||| |||||||||| | ||||||||||||||
Sbjct: 75 tctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 88 ctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
|||||||||||| ||| ||||| ||||| | |||||||||| | |||||||| ||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 148 gga 150
|||
Sbjct: 138 gga 140
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||| |||| ||| ||||||||||| | |||||||||| | ||||||||||||||
Sbjct: 64 tctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123
Query: 147 cgga 150
||||
Sbjct: 124 cgga 127
Score = 54.0 bits (27), Expect = 6e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 1 aactactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatg 60
||||||| | ||||||| |||||||||| | ||||| ||| || | |||||||| ||||
Sbjct: 137 aactacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatg 78
Query: 61 ctaatgaatctagacatat 79
|||| |||||||||||||
Sbjct: 77 ttaataaatctagacatat 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 101 tatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||| |||||||||||| |||||||||| | |||||| | |||||||||
Sbjct: 61 tatctatatgaatgtgaacaatgctagaaagtcttacaatatgaaacgga 12
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatata 82
|||||||| ||||||||||||||||||||||||||
Sbjct: 94 attcatatagatgctaatgaatctagacatatata 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||||||||| ||| ||||||||||| | |||| ||||| | |||| | | |||||
Sbjct: 68 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 127
Query: 147 cgga 150
||||
Sbjct: 128 cgga 131
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 78/94 (82%), Gaps = 6/94 (6%)
Strand = Plus / Plus
Query: 34 ctattatttcctatattcatattgatgctaatgaatctagacatatatacctatctagat 93
|||| |||||| | ||||||||||||| ||||||||||||||| || |||||||
Sbjct: 1 ctatcatttcccacattcatattgatgtcaatgaatctagacat------ctgtctagat 54
Query: 94 tcattagtatcaatatgaatgtgagaaatgctag 127
||||| ||||||||||||||| ||||||||||
Sbjct: 55 tcattgacatcaatatgaatgtgggaaatgctag 88
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 39 atttcctatattcatattgatgctaatgaatctagaca 76
|||||| | ||||||||||||| ||||||||||||||
Sbjct: 83 atttcccacattcatattgatgtcaatgaatctagaca 46
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 112 atgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||| |||||||||||||||||||||||||| ||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 123 gctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacgga 87
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattcta 36
|||||| ||||||| ||||||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattcta 62
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 52 atattgatgctaatgaatctagacatatatacctatctagattcattagtatcaatatga 111
|||| |||| ||||||||||||| | ||| | ||||||||||||||| |||| | || |
Sbjct: 51 atatagatgttaatgaatctagaaacatacatatatctagattcattaatatctaaataa 110
Query: 112 atgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||| ||||||| || | ||||||||||||||||||
Sbjct: 111 atgtggacaatgctaaaaagtcttacattgtgaaacgga 149
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 86 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 145
|||||||||||||| ||| |||||||| |||| |||||||||| |||||| ||| ||||
Sbjct: 76 atctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaa 17
Query: 146 ac 147
||
Sbjct: 16 ac 15
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 86 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 145
||||||||||||||| ||| |||||||| || | |||||||||| | |||| ||| ||||
Sbjct: 69 atctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaa 128
Query: 146 acgga 150
|||||
Sbjct: 129 acgga 133
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | ||| |||| | ||||| ||| || |||||||||| |||||||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 64 atgaatctaga 74
|||||||||||
Sbjct: 80 atgaatctaga 70
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 105 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 105 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| ||||| ||| ||| |||||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacgga 133
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 60.0 bits (30), Expect = 1e-08
Identities = 120/149 (80%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| || |||| |||||||||| | ||||| ||| || | |||||| | |||| ||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 64 atgaatctagacatatatacctatctagattcattag--tatcaatatgaatgtgagaaa 121
||||||||| |||||| || | | ||||||||||| ||| ||||| ||||||| ||
Sbjct: 65 atgaatctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagcaa 124
Query: 122 tgctagaatgacttacattgtgaaacgga 150
||||| || | ||||||||||||||||||
Sbjct: 125 tgctaaaaagtcttacattgtgaaacgga 153
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
||||||||||| ||| | ||||||||| | |||||||||| | |||||||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaac 15
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||| ||||||||||| | |||||||||| | |||||||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 149 ga 150
||
Sbjct: 132 ga 133
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| || ||| | ||| ||| |||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaa 16
Query: 147 cggaa 151
|||||
Sbjct: 15 cggaa 11
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||||| ||||| || ||||||||| |||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacgga 123
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 102 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||| ||| ||| |||||||||||||| |||||||||||||||||
Sbjct: 49 atcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacgga 97
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 112 atgtgagaaatgctagaatgacttacattgtgaaacg 148
|||||| |||| ||||||||||||| |||||||||||
Sbjct: 50 atgtgaaaaatactagaatgacttatattgtgaaacg 14
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 122 tgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacgga 12
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattcta 36
||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||| ||||| ||||| | ||||||||||||| ||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaa 121
Query: 147 c 147
|
Sbjct: 122 c 122
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 120 aatgctagaatgacttacattgtgaaacgga 150
||||||||||||||||||||| |||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||| |||| ||| ||||||||||| ||||||||||| ||||||||| |||||
Sbjct: 67 tctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaa 126
Query: 147 cgga 150
||||
Sbjct: 127 cgga 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 109 tgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| | ||||||||||| ||||||||| |||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 4 tactccatccgttttacaatgtaagtcattctattatttcctatattcatattgatgcta 63
|||||| ||||||| | ||||||||| |||||| ||| | | |||||||| |||| ||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 64 atgaatctagacata 78
|| ||||||||||||
Sbjct: 77 ataaatctagacata 63
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||| |||||||| ||| ||||||||||| | |||||||||| | |||||||| |||||
Sbjct: 75 tctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||| | |||||||||| | |||||||| |||||||||
Sbjct: 91 atatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 135
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||| | ||||||||| |||||||||| | ||||||||||||||
Sbjct: 75 tctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 11 tccgttttacaatgtaagtcattctattatttcctatattcatattgatgctaatgaatc 70
||||||| |||||||||| | ||||| ||| | | |||||| | |||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcattatccacattcatttagatgttaatgaatc 71
Query: 71 tagacatatata 82
||||||||||||
Sbjct: 72 tagacatatata 83
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
|||||||| |||| ||| ||||||||||| |||||||||| | ||||||||||||||
Sbjct: 70 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaa 129
Query: 147 cgga 150
||||
Sbjct: 130 cgga 133
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 117 agaaatgctagaatgacttacattgtgaaacg 148
|||||||||||||||||||||||| |||||||
Sbjct: 106 agaaatgctagaatgacttacattatgaaacg 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 119 aaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||| ||| |||||||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacgga 12
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 117 agaaatgctagaatgacttaca 138
||||||||||||||||||||||
Sbjct: 90 agaaatgctagaatgacttaca 69
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 92 attcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 147
|||||||| |||| ||||||||||| | || ||||||| | |||||||||||||||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaac 104
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| ||| ||||||||||||||| | ||| | | |||||||||| |||| ||
Sbjct: 49 attcatatatatgttaatgaatctagacacacatatatgtttagattcattgatatctat 108
Query: 108 atgaatgtgagaaatgctagaatgacttacattgtgaaac 147
||||||||| | ||||||| || | |||||||| ||||||
Sbjct: 109 atgaatgtgggcaatgctaaaaagtcttacattatgaaac 148
Score = 50.1 bits (25), Expect = 9e-06
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 63 aatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtgagaaat 122
|||||||||| |||||||| | ||||||||||||| || ||||||||||| | ||
Sbjct: 99 aatgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaag 40
Query: 123 gctagaatgacttacattgtgaaac 147
||||||| | |||||||| ||||||
Sbjct: 39 gctagaaagtcttacattatgaaac 15
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 56.0 bits (28), Expect = 2e-07
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 46 atattcatattgatgctaatgaatctagacatatatacctatctagattcattagtatca 105
|||||||||| ||| |||||||||||| |||| ||| | |||||||||||| |||
Sbjct: 23 atattcatatatatgttaatgaatctaggcatacatatatgcctagattcattaacatct 82
Query: 106 atatgaatgtgagaaatgctagaa 129
||||||||||| | ||||||||||
Sbjct: 83 atatgaatgtgggcaatgctagaa 106
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatat 81
|||||||| |||| |||||||||||| |||||||
Sbjct: 90 attcatatagatgttaatgaatctaggcatatat 57
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 119 aaatgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||| |||||||||||||
Sbjct: 51 aaatgctagaatgacttatattgtgaaacgga 82
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 121 atgctagaatgacttacattgtgaaacgga 150
|||||||||||||||||| |||||||||||
Sbjct: 41 atgctagaatgacttacactgtgaaacgga 12
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 92 attcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| ||| ||||| || |||| ||||||| |||| ||||||||||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacgga 130
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 92 attcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||| ||| ||||| || |||| ||||||| |||| ||||||||||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 54.0 bits (27), Expect = 6e-07
Identities = 67/80 (83%), Gaps = 4/80 (5%)
Strand = Plus / Plus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| ||| ||||||||||||||||||| ||||||||||||||| || ||
Sbjct: 15 attcatatatatgttaatgaatctagacatata----tatctagattcattaacatatat 70
Query: 108 atgaatgtgagaaatgctag 127
||||||||| | ||||||||
Sbjct: 71 atgaatgtgggcaatgctag 90
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||| ||||| ||||| | |||||||||| | |||| |||||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 149 ga 150
||
Sbjct: 128 ga 129
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 89 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 148
||||||||||| ||| ||||| ||||| | |||||||||| | |||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 149 ga 150
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| |||| |||||||||||| || | |||| | ||||||||||||| || ||
Sbjct: 90 attcatatagatgttaatgaatctaggcacacatacatgtctagattcattaacatatat 31
Query: 108 atgaatgtgagaaatgctagaa 129
||||||||| ||||||||||
Sbjct: 30 atgaatgtggacaatgctagaa 9
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaat 107
|||||||| ||| |||||||||||||||| ||| | |||||||||||| ||| ||
Sbjct: 25 attcatatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacatctat 84
Query: 108 atgaatgtgagaaatgctagaa 129
||||||||| | ||||||||||
Sbjct: 85 atgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtga 144
||||||||||||||| ||| ||||||||||| | |||||||||| | |||| | | |||
Sbjct: 87 tatctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctga 146
Query: 145 aacgga 150
||||||
Sbjct: 147 aacgga 152
Score = 48.1 bits (24), Expect = 4e-05
Identities = 85/104 (81%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatatacctatctagattca-ttagtatcaa 106
|||||||| |||| ||||||||||||| |||| || | |||||||| | ||| ||| |
Sbjct: 115 attcatatagatgttaatgaatctagatatatgtaggtgtctagattaatttaacatcta 56
Query: 107 tatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
|||||||||| | |||||||||| | |||| | | |||||||||
Sbjct: 55 tatgaatgtgggtaatgctagaaagtcttataatatgaaacgga 12
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 85 tatctagattcattagtatcaatatgaatgtgagaaatgctagaa 129
||||||||||||||| ||| ||||||||||| | ||||||||||
Sbjct: 49 tatctagattcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||| | |||||||||| | |||||||| |||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||| ||||||||||| |||||||||| | |||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 121
Query: 147 c 147
|
Sbjct: 122 c 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacatatata 82
|||||||| |||| |||||||||||||||| ||||
Sbjct: 88 attcatatagatgttaatgaatctagacatctata 54
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||| | || ||||||| | ||||||||||||||||||
Sbjct: 56 atatgaatgtgggcaacgctagaaagtcttacattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 106 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 150
||||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 69 atatgaatgtgggcaatgctagaaactcttacattgtgaaacgga 113
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||| ||| ||| ||||||||||| |||||||||| | |||||||| |||||
Sbjct: 38 tctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 97
Query: 147 cgga 150
||||
Sbjct: 98 cgga 101
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 119 aaatgctagaatgacttacattgtgaaacgga 150
|||| ||||||||||||||||| |||||||||
Sbjct: 43 aaatactagaatgacttacattatgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 tactccatccgttttacaatgtaagtcattctattattt 42
|||||| ||||||| | |||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattt 43
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||| ||||||||||| | |||||||||| | |||| | | |||||
Sbjct: 56 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 115
Query: 147 cgga 150
||||
Sbjct: 116 cgga 119
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 48 attcatattgatgctaatgaatctagacat 77
|||||||| |||| ||||||||||||||||
Sbjct: 82 attcatatagatgttaatgaatctagacat 53
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 87 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 146
||||||||||||| ||| | ||||||||| | || |||| || | ||||||||||||||
Sbjct: 75 tctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaa 16
Query: 147 cgga 150
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 120 aatgctagaatgacttacattgtgaaacgga 150
|||||||||| | ||||||||||||||||||
Sbjct: 102 aatgctagaaagtcttacattgtgaaacgga 132
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 120 aatgctagaatgacttacattgtgaaacgga 150
|||||||||| | ||||||||||||||||||
Sbjct: 42 aatgctagaaagccttacattgtgaaacgga 12
