miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 78/80 (97%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| |
Sbjct: 158 tacttcctccgtttcaca-atgtaagtcattctaatatttcccacattcatattgatgtt 100
Query: 72 aatgaatctaga 83
||||||| ||||
Sbjct: 99 aatgaatgtaga 88
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggaggaagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtaa 4
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 4e-29
Identities = 77/80 (96%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgttgtt 63
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||| ||||||||| | ||||||||||||| | ||||||||||||||||||||||| |
Sbjct: 158 tactccttccgtttcata-atgtaagtcattccaccatttcccacattcatattgatggt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 127 bits (64), Expect = 4e-29
Identities = 74/76 (97%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 71 taatgaatctagatag 86
||||||||||||||||
Sbjct: 63 taatgaatctagatag 78
Score = 81.8 bits (41), Expect = 2e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || ||||||||||||||||||||||| || ||||||||| |
Sbjct: 156 tacttcctccgtttcaca-atataagtcattctagcatttcccacgtttatattgatgtt 98
Query: 72 aatgaatct 80
|||||||||
Sbjct: 97 aatgaatct 89
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 125 bits (63), Expect = 2e-28
Identities = 73/75 (97%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgc 62
Query: 71 taatgaatctagata 85
|||||||||||||||
Sbjct: 63 taatgaatctagata 77
Score = 111 bits (56), Expect = 2e-24
Identities = 69/72 (95%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||
Sbjct: 152 tactccctccgtttcaca-atataagtcattctagcatttcctacattcatattgatgct 94
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 93 aatgaatctaga 82
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 125 bits (63), Expect = 2e-28
Identities = 76/79 (96%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 136 tactccctccgtttcaca-atgtaagtcattctaacatttcccacattcatattgatgtt 78
Query: 72 aatgaatctagatagatat 90
|||||||||||||||||||
Sbjct: 77 aatgaatctagatagatat 59
Score = 83.8 bits (42), Expect = 5e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattctagcatttcccatattcatattgat 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaag 124
||||||||||||| |||||||| ||||| ||||||
Sbjct: 104 tagaatgacttacattgtgaaacggagggagtaag 138
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 2e-27
Identities = 77/81 (95%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgacgt 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || ||||||||| ||| |||||||||||| ||||||||| |
Sbjct: 158 tactccctccgtttcaca-atctaagtcattttagaatttcccacattaatattgatggt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 119 bits (60), Expect = 1e-26
Identities = 70/72 (97%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 159 agtactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatg 101
Query: 70 ctaatgaatcta 81
|||||||||||
Sbjct: 100 ttaatgaatcta 89
Score = 109 bits (55), Expect = 9e-24
Identities = 68/71 (95%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 64 aatgaatctag 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 76/80 (95%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 158 tactccctccgtatcaca-atgtaagtcattctagcatttcccacattcatattgatatt 100
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 99 aatgaatctagatagatata 80
Score = 89.7 bits (45), Expect = 9e-18
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| |||||||||||| | |||||||||||||| |||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcatttttgcatttcccacatttatattgatgt 62
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 63 taatgaatctaga 75
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 119 bits (60), Expect = 1e-26
Identities = 67/68 (98%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgct 63
Query: 72 aatgaatc 79
||||||||
Sbjct: 64 aatgaatc 71
Score = 111 bits (56), Expect = 2e-24
Identities = 66/68 (97%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgtttcata-atgtaagtcattctagcatttcccacattcatattgatgct 80
Query: 72 aatgaatc 79
||||||||
Sbjct: 79 aatgaatc 72
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 70/72 (97%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 75.8 bits (38), Expect = 1e-13
Identities = 51/54 (94%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatatt 65
|||||||||||||||||| |||||||||||| |||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattatagcattttccacattcatatt 57
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 119 bits (60), Expect = 1e-26
Identities = 70/72 (97%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 149 tactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 90 aatgaatctaga 79
Score = 111 bits (56), Expect = 2e-24
Identities = 69/72 (95%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 119 bits (60), Expect = 1e-26
Identities = 101/112 (90%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | |||||||||||||||||||||||||||||||||||||| |
Sbjct: 115 tacttcctccgtttcata-atgtaagtcattctagcatttcccacattcatattgatatt 57
Query: 72 aatgaatctagatagat-atagaatgacttaccttgtgaaatggaggaagta 122
|||||||||||||| || ||||||||||||| |||||||| ||||| ||||
Sbjct: 56 aatgaatctagatatatgctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 8e-09
Identities = 37/38 (97%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcat 49
|||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcat 41
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 76/80 (95%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 158 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgtt 100
Query: 72 aatgaatctagatagatata 91
|||||||||||||| |||||
Sbjct: 99 aatgaatctagataaatata 80
Score = 101 bits (51), Expect = 2e-21
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagtcattctagcattttccatattcatattgatgt 62
Query: 71 taatgaatcta 81
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 117 bits (59), Expect = 4e-26
Identities = 72/75 (96%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||
Sbjct: 133 gtactccctccgtttcaca-atataagtcattctagcatttcccacattcatattaatgc 75
Query: 71 taatgaatctagata 85
|||||||||||||||
Sbjct: 74 taatgaatctagata 60
Score = 89.7 bits (45), Expect = 9e-18
Identities = 55/57 (96%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 117 bits (59), Expect = 4e-26
Identities = 72/75 (96%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||
Sbjct: 4 gtactccctccgtttcaca-atataagtcattctagcatttcccacattcatattaatgc 62
Query: 71 taatgaatctagata 85
|||||||||||||||
Sbjct: 63 taatgaatctagata 77
Score = 89.7 bits (45), Expect = 9e-18
Identities = 55/57 (96%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 117 bits (59), Expect = 4e-26
Identities = 72/75 (96%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 3 agtactccctccgtttcaca-atgtaagtcattctagcatttcccatattcatattgatg 61
Query: 70 ctaatgaatctagat 84
||||||||||||||
Sbjct: 62 ttaatgaatctagat 76
Score = 97.6 bits (49), Expect = 4e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 140 tacttcctccgtttcata-atgtaagtcattctagcatttcccatattcatattgatgtt 82
Query: 72 aatgaatctagat 84
|||||||||||||
Sbjct: 81 aatgaatctagat 69
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 115 bits (58), Expect = 2e-25
Identities = 71/74 (95%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 141 agtactccctccgtttcaca-atgtaagtcattctagcatttcccatattcatattgatg 83
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 82 ttaatgaatctaga 69
Score = 61.9 bits (31), Expect = 2e-09
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcat 62
|||| ||||||||||| | ||||||||||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcata-atgtaagtcattctagcatttcccatattcat 54
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 115 bits (58), Expect = 2e-25
Identities = 71/74 (95%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 3 agtactccctccgtttcaca-atgtaagtcattctagcatttcccatattcatattgatg 61
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 62 ttaatgaatctaga 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcat 62
|||| ||||||||||| | ||||||||||||||||||||||||| ||||||
Sbjct: 139 tacttcctccgtttcata-atgtaagtcattctagcatttcccatattcat 90
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 77/82 (93%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||| | ||||||||||||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcatttcctatattcatattgatgtt 63
Query: 72 aatgaatctagatagatataga 93
||||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatataga 85
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||| | || |||||||||||||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctagcatattccgcattcatattgatgtt 100
Query: 72 aatgaatctaga 83
||||||| ||||
Sbjct: 99 aatgaatataga 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 76/81 (93%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 159 gtactccctccgtttcaca-atataagtcattctagcatttcccacattcatattgatat 101
Query: 71 taatgaatctagatagatata 91
||||||||||||||| |||||
Sbjct: 100 taatgaatctagatatatata 80
Score = 79.8 bits (40), Expect = 8e-15
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || |||||||||||| | ||| ||||||||||||| ||| |
Sbjct: 5 tacttcctccgtttcaca-atataagtcattctaactttttccacattcatattaatgtt 63
Query: 72 aatgaatctagatagatata 91
|||||||||||||| |||||
Sbjct: 64 aatgaatctagataaatata 83
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 113 bits (57), Expect = 6e-25
Identities = 70/73 (95%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 63 taatgaatctaga 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 113 bits (57), Expect = 6e-25
Identities = 70/73 (95%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactacctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 63 taatgaatctaga 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||| ||||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 141 gtacttcctccgtttcaca-atgtaagtcattctagcattttgtacatacatattgatg 84
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 108 tagaatgacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 76/81 (93%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 4 gtactccttccgtttcaca-atgtaagtcattctaccatttctcacattcatattgatgt 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| | | |||||| ||||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctagcattttctaaattcatgttgatatt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 113 bits (57), Expect = 6e-25
Identities = 76/81 (93%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || ||||||||||||| ||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcaca-atataagtcattctagtatttcccacattcatattgatact 63
Query: 72 aatgaatctagatagatatag 92
|||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatatag 84
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | ||||||||||||| | ||||||||||||||||||||||||
Sbjct: 155 tactccctccgtttcata-atgtaagtcattccaccatttcccacattcatattgatgcc 97
Query: 72 aatgaatctaga 83
|||| |||||||
Sbjct: 96 aatggatctaga 85
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
|||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttatattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 113 bits (57), Expect = 6e-25
Identities = 70/73 (95%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
|||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gtactccctccgttccaca-atgtaagtcattctagcatttcccacattcatattgatgt 99
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 98 taatgaatctaga 86
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| |||||||| |||| ||||||||||||||||||||| | ||||||||||||||| |
Sbjct: 5 tacttcctccgttccaca-atgtaagtcattctagcattttctacattcatattgatgtt 63
Query: 72 aatgaatctaga 83
||||||| ||||
Sbjct: 64 aatgaatgtaga 75
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 76/81 (93%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcaca-atataagtcattctagcatttctcacattcatattgatac 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
Score = 111 bits (56), Expect = 2e-24
Identities = 69/72 (95%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctaacatttaccacattcatattgatgct 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 113 bits (57), Expect = 6e-25
Identities = 73/77 (94%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 2 aagtactccctccgtttcaca-atgtaagtcattctagcatttctcacattcatattgat 60
Query: 69 gctaatgaatctagata 85
|||||||||||||||
Sbjct: 61 attaatgaatctagata 77
Score = 83.8 bits (42), Expect = 5e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 142 tacttcctccgtttcaca-atgtaagtcattctagcatttcccatattcatattgatg 86
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 110 tagaatgacttacattgtgaaacggaggaagta 142
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 76/81 (93%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattctagcattttccacatccatattgatgt 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
Score = 103 bits (52), Expect = 6e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||| || |
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctagtatttcccacattcatattgttgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 69/72 (95%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctagcattttccacattcatattgatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| ||||| |||||||||||||| |||||||||||| |||||
Sbjct: 4 gtacttcctccgtttcaca-atgtatgtcattctagcattgtccacattcatatagatgc 62
Query: 71 taatgaatctag 82
||||||||||||
Sbjct: 63 taatgaatctag 74
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagtaa 159
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 111 bits (56), Expect = 2e-24
Identities = 69/72 (95%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 162 tactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatagtgatgtt 104
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 103 aatgaatctaga 92
Score = 79.8 bits (40), Expect = 8e-15
Identities = 75/85 (88%), Gaps = 5/85 (5%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat----tg 66
||||| ||||||||||||| |||||||||||||||||||||| || ||||||| ||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattctagcatttcgcatattcatacatagtg 62
Query: 67 atgctaatgaatctagatagatata 91
||| |||||||||||||||||||||
Sbjct: 63 atgttaatgaatctagatagatata 87
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 111 bits (56), Expect = 2e-24
Identities = 69/72 (95%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 48.1 bits (24), Expect = 3e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacatt 59
|||| ||||||||||| | ||| ||||||||||| |||||||||||||
Sbjct: 134 tacttcctccgtttcata-atggaagtcattctaacatttcccacatt 88
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 69/72 (95%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatagtgatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 103 bits (52), Expect = 6e-22
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctaacattttccacattcatattgatatt 100
Query: 72 aatgaatctagatagatata 91
|||||||||| |||||||||
Sbjct: 99 aatgaatctaaatagatata 80
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagtaa 159
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 109 bits (55), Expect = 9e-24
Identities = 68/71 (95%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattttagcatttcccacattcatattgatgct 63
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 64 aatgaatctag 74
Score = 89.7 bits (45), Expect = 9e-18
Identities = 62/65 (95%), Gaps = 2/65 (3%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcat-tctagcatttcccacattcatattgatgc 70
|||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||
Sbjct: 143 tactccctccgtttcaca-atgtaagtcatgtttagcatttcccacattcatattgatgc 85
Query: 71 taatg 75
|||||
Sbjct: 84 taatg 80
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 93 aatgacttaccttgtgaaatggaggaagtaag 124
|||||||||| |||||||| ||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtaag 3
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 109 bits (55), Expect = 9e-24
Identities = 68/71 (95%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 143 tacttcctccgtttcaca-atgtaagtcattttagcatttcccacattcatattgatgct 85
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 84 aatgaatctag 74
Score = 89.7 bits (45), Expect = 9e-18
Identities = 62/65 (95%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcat-tctagcatttcccacattcatattgatgc 70
|||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcatgtttagcatttcccacattcatattgatgc 63
Query: 71 taatg 75
|||||
Sbjct: 64 taatg 68
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 93 aatgacttaccttgtgaaatggaggaagtaag 124
|||||||||| |||||||| ||||||||||||
Sbjct: 114 aatgacttacattgtgaaacggaggaagtaag 145
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 109 bits (55), Expect = 9e-24
Identities = 68/71 (95%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 141 gtactccctccgtttcaca-atataagtcattctagcatttcccacattcatattgatgt 83
Query: 71 taatgaatcta 81
|||||||||||
Sbjct: 82 taatgaatcta 72
Score = 87.7 bits (44), Expect = 3e-17
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattaatgt 62
Query: 71 taat 74
||||
Sbjct: 63 taat 66
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 107 bits (54), Expect = 4e-23
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 123 tactccctccgtttcata-atgtaagtcattctagcatttcctacattcatattgatgtt 65
Query: 72 aatgaatctagata 85
||||||||||||||
Sbjct: 64 aatgaatctagata 51
Score = 56.0 bits (28), Expect = 1e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcattt 51
|||| ||||||||||||| |||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcattt 43
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 3 agtactccctccgtttcaca-atgtaagtcattctatcatttcccacattcatattgata 61
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 62 ttaatgaatctaga 75
Score = 87.7 bits (44), Expect = 3e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||||||||||||| ||||||||||| | |
Sbjct: 158 tacttcctccgtttcaca-atgtaagtcattctagcatttctcacattcatatattagtt 100
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 99 aatgaatctagatagatata 80
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggaggaagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 89 atagaatgacttaccttgtgaaatggaggaagta 122
|||||||||||||| |||||||| ||||| ||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 107 bits (54), Expect = 4e-23
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 72 aatgaatctagata 85
|||| |||||||||
Sbjct: 64 aatgtatctagata 77
Score = 91.7 bits (46), Expect = 2e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 146 tacttcctccgttccaca-atgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 72 aatgaatcta 81
|||| |||||
Sbjct: 87 aatgtatcta 78
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 107 bits (54), Expect = 4e-23
Identities = 67/70 (95%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatatagatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 89.7 bits (45), Expect = 9e-18
Identities = 52/53 (98%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 124 tactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 3 agtactccctccgtttcaca-atgtaagtcattctaacatttcccacattcatattgata 61
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 62 ttaatgaatctaga 75
Score = 103 bits (52), Expect = 6e-22
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctagtatttttcacattcatattgatttt 100
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 99 aatgaatctagatagatata 80
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagtaa 159
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 107 bits (54), Expect = 4e-23
Identities = 67/70 (95%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 130 tactccctctgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgtt 72
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 71 aatgaatcta 62
Score = 61.9 bits (31), Expect = 2e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| |||| |||||||| || ||||||||| |||||||| ||||||||||||||||| |
Sbjct: 1 tacttcctctgtttcaca-atataagtcattatagcattttccacattcatattgatgtt 59
Query: 72 aat 74
|||
Sbjct: 60 aat 62
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 76/82 (92%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatatagatgtt 100
Query: 72 aatgaatctagatagatataga 93
||||||||| ||| |||||||
Sbjct: 99 gatgaatctaaatatatataga 78
Score = 81.8 bits (41), Expect = 2e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| ||||||||||| || |||||| ||||||||||| ||||
Sbjct: 4 gtactccctccgtttcacat-tgtaagtcattttatcatttctcacattcatatagatgt 62
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 63 taatgaatctaga 75
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 107 bits (54), Expect = 4e-23
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || |||||||||||| ||||||||||||||||||||||| |
Sbjct: 135 tactccctccgtttcaca-atataagtcattctaacatttcccacattcatattgatgtt 77
Query: 72 aatgaatctagata 85
||||||||||||||
Sbjct: 76 aatgaatctagata 63
Score = 75.8 bits (38), Expect = 1e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||| ||||||||||||| || |||||||||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcaca-atataagtcattctagcattttccacattcatattgatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
|||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttatattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 105 bits (53), Expect = 1e-22
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagttattctagcatttttcacattcatattgatgct 63
Query: 72 aatgaatctagat 84
|||||||||||||
Sbjct: 64 aatgaatctagat 76
Score = 81.8 bits (41), Expect = 2e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||| ||||| |||||||| | ||||| |||||||||||
Sbjct: 146 tactccctccgtttcaca-atgtaaatcattttagcattttctacatttatattgatgct 88
Query: 72 aatgaatctagat 84
||||||| |||||
Sbjct: 87 aatgaatttagat 75
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 105 bits (53), Expect = 1e-22
Identities = 66/69 (95%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatggt 63
Query: 72 aatgaatct 80
|||||||||
Sbjct: 64 aatgaatct 72
Score = 95.6 bits (48), Expect = 1e-19
Identities = 61/64 (95%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 138 gtactccctccgtttcacaaa-gtaagtcattctagcatttcccacattcatattgatgt 80
Query: 71 taat 74
||||
Sbjct: 79 taat 76
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 105 bits (53), Expect = 1e-22
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tactccctccgtttcata-atgtaagtcattctagcatttcccacattcatattgatgtc 94
Query: 72 aatgaatctagatagat 88
|||||||||||| ||||
Sbjct: 93 aatgaatctagacagat 77
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctatcatttcccacattcatattgatgtc 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 89 atagaatgacttaccttgtgaaatggaggaagta 122
|||||||||||||| |||||||| ||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 105 bits (53), Expect = 1e-22
Identities = 66/69 (95%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 150 agtactccccccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatg 92
Query: 70 ctaatgaat 78
||||||||
Sbjct: 91 ttaatgaat 83
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacatttatattaatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 105 bits (53), Expect = 1e-22
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||||
Sbjct: 2 aagtactccctccgtttcaca-atgtaagtcattctagcattttctatattcatattgat 60
Query: 69 gctaatgaatctagata 85
| |||||||||||||||
Sbjct: 61 gttaatgaatctagata 77
Score = 61.9 bits (31), Expect = 2e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || |||||||||||| |||||| ||||||||||||||| |
Sbjct: 138 tacttcctccgtttcaca-atataagtcattctactatttcctacattcatattgatgtt 80
Query: 72 aat 74
|||
Sbjct: 79 aat 77
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattttagcatttcccacattcatattagtgt 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctagcattctccacattcatattaatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 105 bits (53), Expect = 1e-22
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||||||
Sbjct: 129 agtacttcctccgtttcaca-atataagtcattctagcatttctcacattcatattgatg 71
Query: 70 ctaatgaatctagatag 86
||||||||||||||||
Sbjct: 70 ttaatgaatctagatag 54
Score = 63.9 bits (32), Expect = 5e-10
Identities = 42/44 (95%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttc 52
||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 2 aagtacttcctccgtttcaca-atgtaagtcattctagcatttc 44
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 103 bits (52), Expect = 6e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| |
Sbjct: 145 tactccctccgtttcaca-atgtaagtcattctagcattttccatattcatattgatgtt 87
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 86 aatgaatctaga 75
Score = 75.8 bits (38), Expect = 1e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 17 cctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgctaatga 76
||||||||||| | |||||||||||||||||||||| |||||| ||||||||| |||| |
Sbjct: 10 cctccgtttcata-atgtaagtcattctagcatttctcacatttatattgatgttaataa 68
Query: 77 atctag 82
||||||
Sbjct: 69 atctag 74
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 113 tagaatgacttacattgtgaaacggagggagtaa 146
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 103 bits (52), Expect = 6e-22
Identities = 65/68 (95%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 72 aatgaatc 79
||||||||
Sbjct: 64 aatgaatc 71
Score = 97.6 bits (49), Expect = 4e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||
Sbjct: 142 gtactccctccgtttcaca-atgtaattcattctagcatttctcacattcatattgatgt 84
Query: 71 taatgaatc 79
|||||||||
Sbjct: 83 taatgaatc 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 6e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 89.7 bits (45), Expect = 9e-18
Identities = 73/80 (91%), Gaps = 3/80 (3%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| |
Sbjct: 156 tactccctccgtttcaca-atgtaagtcattctagcattt--cacatttatattgatgtt 100
Query: 72 aatgaatctagatagatata 91
||| |||||| |||||||||
Sbjct: 99 aataaatctatatagatata 80
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 103 bits (52), Expect = 6e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattttagcatttctcacatccatattgatgct 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||||||||||||| | || |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatacttatatt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 103 bits (52), Expect = 6e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 146 tactccctcggtttcaca-atgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 72 aatgaatctaga 83
|||||| |||||
Sbjct: 87 aatgaaactaga 76
Score = 91.7 bits (46), Expect = 2e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcata-atgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 103 bits (52), Expect = 6e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgtc 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 91.7 bits (46), Expect = 2e-18
Identities = 56/58 (96%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tactccctccgtttcata-atgtaagtcattctagcatttcccacattcatattgatg 79
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 6e-22
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcattttccacattcgtattgatgtt 63
Query: 72 aatgaatctagatagatata 91
||||| ||||||||||||||
Sbjct: 64 aatgactctagatagatata 83
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || |||||||||||||||||| | | |||||||||||||||
Sbjct: 158 tactccctccgtttcaca-atataagtcattctagcattttctatattcatattgatgct 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 103 bits (52), Expect = 6e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 136 tactccctccgtttcata-atgtaagtcattctagtatttcccatattcatattgatgct 78
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 77 aatgaatctaga 66
Score = 65.9 bits (33), Expect = 1e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||| ||||||| ||||| || |||||||||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagtaattctagtatttctcatattcatattgatgct 63
Query: 72 a 72
|
Sbjct: 64 a 64
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 6e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcatttcccacatttatattggtgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 89.7 bits (45), Expect = 9e-18
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
|||||||||||||| |||| || |||||||||||||||||| |||||||||||||||
Sbjct: 159 gtactccctccgttccaca-atataagtcattctagcatttttcacattcatattgatat 101
Query: 71 taatgaatctagatagatata 91
||||||||||| |||||||||
Sbjct: 100 taatgaatctaaatagatata 80
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 6e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctagcatttctcacattcatattaatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 89.7 bits (45), Expect = 9e-18
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| |||||||||||||||||||| |||| |||||||| ||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattctagcattacccatattcatatggatgt 62
Query: 71 taatgaatctagatagatata 91
|||||||||||| | ||||||
Sbjct: 63 taatgaatctagttggatata 83
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagtaa 159
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 103 bits (52), Expect = 6e-22
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| |||||||||| || |||||||||||||||||||||| |||||||||||||||| |
Sbjct: 5 tacttcctccgtttcgca-atgtaagtcattctagcatttctcacattcatattgatggt 63
Query: 72 aatgaatctagataga 87
||||||||||||||||
Sbjct: 64 aatgaatctagataga 79
Score = 93.7 bits (47), Expect = 6e-19
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||| ||||||||| ||| ||||| ||| |
Sbjct: 157 tactccctccgtttcaca-atgtaagtcattctaacatttcccatatttatattaatgtt 99
Query: 72 aatgaatctagatagatat 90
|||||||||||||| ||||
Sbjct: 98 aatgaatctagatatatat 80
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 6e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |
Sbjct: 156 tactccctccgtttcaca-atgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 97 aatgaatctaga 86
Score = 89.7 bits (45), Expect = 9e-18
Identities = 73/80 (91%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcattt--cacatttatattgatgtt 61
Query: 72 aatgaatctagatagatata 91
||| |||||| |||||||||
Sbjct: 62 aataaatctatatagatata 81
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 103 bits (52), Expect = 6e-22
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || ||||||||| |||||||||||||||||||||| ||| |
Sbjct: 5 tacttcctccgtttcaca-atataagtcattgtagcatttcccacattcatatttatgtt 63
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || |||| ||||||||||||| |||||| ||||||||| |
Sbjct: 158 tactccctccgtttcaca-atataagccattctagcatttttcacatttatattgatgat 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 6e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattatagcattacccacattcatattgatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 103 bits (52), Expect = 6e-22
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || ||||||||| |||||||||||||||||||||| ||| |
Sbjct: 158 tacttcctccgtttcaca-atataagtcattttagcatttcccacattcatattaatgtt 100
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 99 aatgaatctagatagatata 80
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 101 bits (51), Expect = 2e-21
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||
Sbjct: 141 gtactccctccgtttcaca-atataagtcattctagcattttccacattcatattgatgt 83
Query: 71 taatgaatcta 81
|||||||||||
Sbjct: 82 taatgaatcta 72
Score = 87.7 bits (44), Expect = 3e-17
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattaatgt 62
Query: 71 taat 74
||||
Sbjct: 63 taat 66
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 64/67 (95%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctagcattttccacattcatatagatgct 100
Query: 72 aatgaat 78
|||||||
Sbjct: 99 aatgaat 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||| ||||| | | |||||||| ||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctaacattttctatattcatatagatgct 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 101 bits (51), Expect = 2e-21
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||| |
Sbjct: 130 tactccctccgtttcac-catgtaagtcactctaacattttccacattcatattgatgtt 72
Query: 72 aatgaatctagatagatat 90
|||||||||||||| ||||
Sbjct: 71 aatgaatctagatatatat 53
Score = 50.1 bits (25), Expect = 7e-06
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
|||||||||||||||||| ||| |||||| | ||||||||| || ||||||||
Sbjct: 5 tactccctccgtttcaca-atgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 99.6 bits (50), Expect = 9e-21
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcattttccacattcatatcgatgtt 63
Query: 72 aatgaatctagatagata 89
||||| | ||||||||||
Sbjct: 64 aatgagtttagatagata 81
Score = 77.8 bits (39), Expect = 3e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||||||
Sbjct: 153 gtacttcctccgtttcaca-atgtaagtcattctagcattttccatattcatattgatg 96
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 120 tagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 99.6 bits (50), Expect = 9e-21
Identities = 63/66 (95%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 19 tccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgctaatgaat 78
||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 12 tccgtttcaca-atgtaagtcattctagcatttctcacattcatattgatgttaatgaat 70
Query: 79 ctagat 84
||||||
Sbjct: 71 ctagat 76
Score = 83.8 bits (42), Expect = 5e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||| |
Sbjct: 146 tactccctccgtttcaca-atgtaagtcattctagcattttccatatttatattgatatt 88
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 87 aatgaatcta 78
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 99.6 bits (50), Expect = 9e-21
Identities = 63/66 (95%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 19 tccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgctaatgaat 78
||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 12 tccgtttcaca-atgtaagtcattctagcatttctcacattcatattgatgttaatgaat 70
Query: 79 ctagat 84
||||||
Sbjct: 71 ctagat 76
Score = 75.8 bits (38), Expect = 1e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||| |||||||| ||| ||| |||||||| |
Sbjct: 146 tactccctccgtttcaca-atgtaagtcattatagcattttccatatttatattgatatt 88
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 87 aatgaatcta 78
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 99.6 bits (50), Expect = 9e-21
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 5 tactctctccgtttcaca-atgtaagtcattctaacatttcccacattcatattgatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 65/75 (86%), Gaps = 8/75 (10%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
|||||| |||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 144 gtactctctccgtttcaca-atgtaagtcattctagcatt-------ttcatattgatgt 93
Query: 71 taatgaatctagata 85
|||||||||||||||
Sbjct: 92 taatgaatctagata 78
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 99.6 bits (50), Expect = 9e-21
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| |
Sbjct: 152 tactccctccgtttcaca-atgtaagtcattctagccttttccacattcatattgatgtt 94
Query: 72 aatgaatctagatagata 89
||||| | ||||||||||
Sbjct: 93 aatgagtttagatagata 76
Score = 89.7 bits (45), Expect = 9e-18
Identities = 58/61 (95%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 2 aagtacttcctccgtttcaca-atgtaagtcattctagcattttccacattcatattgat 60
Query: 69 g 69
|
Sbjct: 61 g 61
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 99.6 bits (50), Expect = 9e-21
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
Sbjct: 134 tacttcctccgtttcaca-atgtaagtcattttagcatttcccacattcatattgatgtt 76
Query: 72 aatgaatctagata 85
|||||||| |||||
Sbjct: 75 aatgaatcaagata 62
Score = 71.9 bits (36), Expect = 2e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||| ||||||||||| |||||||||||| | |||||| |||||||||||||||||
Sbjct: 3 agtactccatccgtttcaca-atgtaagtcattttggcattttccacattcatattgatg 61
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||
Sbjct: 157 gtactccctccgtttcaca-atgtaagtcattctagcatttttcacattcatactcatgt 99
Query: 71 taatgaatctagatagatata 91
||||||||||||||| |||||
Sbjct: 98 taatgaatctagatatatata 78
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || ||||||||||| |||||||||||||||||| | ||| |
Sbjct: 5 tacttcctccgtttcaca-atataagtcattctggcatttcccacattcatactcatgtt 63
Query: 72 aatgaatctaga 83
||||||| ||||
Sbjct: 64 aatgaatttaga 75
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 97.6 bits (49), Expect = 4e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || ||||||||||||||||||| ||||||||||||||||||
Sbjct: 135 tacttcctccgtttcaca-atataagtcattctagcatttctcacattcatattgatgct 77
Query: 72 aatgaatct 80
|||||||||
Sbjct: 76 aatgaatct 68
Score = 89.7 bits (45), Expect = 9e-18
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctctgtttcacg-atgtaagtcattctagcatttctcacattcatattgatgct 63
Query: 72 aatga 76
|||||
Sbjct: 64 aatga 68
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
|||||||||||| |||||||| |||||||||||
Sbjct: 103 tagaatgacttatattgtgaaacggaggaagtaa 136
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 97.6 bits (49), Expect = 4e-20
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| |||||||| |||||||||||| ||||| | |||||||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagttattctagcattttccacaattatattgatgt 62
Query: 71 taatgaatctagatagatata 91
||||||||||| |||||||||
Sbjct: 63 taatgaatctatatagatata 83
Score = 44.1 bits (22), Expect = 5e-04
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcat 41
|||||||||||||||||| |||||||||||
Sbjct: 126 tactccctccgtttcaca-atgtaagtcat 98
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||||||| || ||||||||||||||||||||||| |
Sbjct: 5 tactccctccgtttcata-atgtaagtcattttaccatttcccacattcatattgatgtt 63
Query: 72 aatgaatctagat 84
|||||||||||||
Sbjct: 64 aatgaatctagat 76
Score = 75.8 bits (38), Expect = 1e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| |||||||| |||| || |||||||||||||||||| | | |||||||||||||
Sbjct: 147 gtacttcctccgttccaca-atataagtcattctagcatttactatattcatattgatgt 89
Query: 71 taatgaatctagat 84
||||||||||||||
Sbjct: 88 taatgaatctagat 75
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 97.6 bits (49), Expect = 4e-20
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| |
Sbjct: 145 tactccctccgtttcaca-atgtaagtcattctagcatttctcatatttatattgatgtt 87
Query: 72 aatgaatctagatagat 88
||| |||||||||||||
Sbjct: 86 aataaatctagatagat 70
Score = 85.7 bits (43), Expect = 1e-16
Identities = 56/59 (94%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattttagcatttcccacattcatattgatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 113 tagaatgacttacattgtgaaacggagggagtaa 146
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 tccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgctaat 74
||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 155 tccctccgtttcaca-atgtaagtcattctagcatttctcacattcatattgatgtcaat 97
Query: 75 gaatctaga 83
|||||||||
Sbjct: 96 gaatctaga 88
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 15 tccctccgtttcacacatgtaagtcattctagcatttcccacattcatattga 67
||||||||||||||| ||||||||||||||||||| || ||||||||||||||
Sbjct: 8 tccctccgtttcaca-atgtaagtcattctagcatntctcacattcatattga 59
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 35 aagtcattctagcatttcccacattcatattgatgctaatgaatctagatagatata 91
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatata 67
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 35 aagtcattctagcatttcccacattcatattgatgctaatgaatctagat 84
||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagat 50
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa
Japonica Group
Length = 148
Score = 97.6 bits (49), Expect = 4e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 3 agtactccctccgtttcaca-atgtaagccattctagcatttcccacattcatattgatg 61
Query: 70 ctaatgaat 78
| ||||||
Sbjct: 62 ttcatgaat 70
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 144 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattgatgtt 86
Query: 72 aatgaatctaga 83
|| ||||||||
Sbjct: 85 cataaatctaga 74
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 112 tagaatgacttacattgtgaaacggaggaagta 144
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||||||| || ||||||||||||||||||||||| |
Sbjct: 146 tactccctccgtttcata-atgtaagtcattttaccatttcccacattcatattgatgtt 88
Query: 72 aatgaatctagat 84
|||||||||||||
Sbjct: 87 aatgaatctagat 75
Score = 75.8 bits (38), Expect = 1e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| |||||||| |||| || |||||||||||||||||| | | |||||||||||||
Sbjct: 4 gtacttcctccgttccaca-atataagtcattctagcatttactatattcatattgatgt 62
Query: 71 taatgaatctagat 84
||||||||||||||
Sbjct: 63 taatgaatctagat 76
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 35 aagtcattctagcatttcccacattcatattgatgctaatgaatctagatagatata 91
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatata 57
Score = 89.7 bits (45), Expect = 9e-18
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 35 aagtcattctagcatttcccacattcatattgatgctaatgaatctaga 83
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaga 62
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||| |||||||||||||| | |||||||||||||||||
Sbjct: 146 tactccctccgtttcaca-atgtaaatcattctagcattttctacattcatattgatgct 88
Query: 72 aatgaatctagat 84
||||||| |||||
Sbjct: 87 aatgaatttagat 75
Score = 89.7 bits (45), Expect = 9e-18
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||| |||| || ||| |||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagtatttttcatatttatattgatgct 63
Query: 72 aatgaatctagat 84
|||||||||||||
Sbjct: 64 aatgaatctagat 76
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 97.6 bits (49), Expect = 4e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 8 gaagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattga 67
|||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||
Sbjct: 1 gaagtactccctccgtttcaca-atgtaagtcattttagcattttccacattcatattga 59
Query: 68 tgctaatga 76
|| ||||||
Sbjct: 60 tgttaatga 68
Score = 69.9 bits (35), Expect = 8e-12
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||||||||||||||||| |||||| | ||| |||||||| |||||||||||||||||
Sbjct: 129 gtactccctccgtttcaca-atgtaatttattttagcattttccacattcatattgatg 72
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 97.6 bits (49), Expect = 4e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||| | |||||||||||||||||||||| || |||||||||||||
Sbjct: 4 gtactccctccgtttcata-atgtaagtcattctagcatttctcatattcatattgatgt 62
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 63 taatgaatctaga 75
Score = 75.8 bits (38), Expect = 1e-13
Identities = 51/54 (94%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcata 63
|||||| ||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 147 agtacttcctccgttttaca-atgtaagtcattctagcatttcccacattcata 95
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 97.6 bits (49), Expect = 4e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 148 gtactccctccgtttcaca-atgtaagtcattttagtatttctcacattcatattgatgt 90
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 89 taatgaatctaga 77
Score = 56.0 bits (28), Expect = 1e-07
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
|||||||||| |||||||| |||||||||||| ||| |||| |||||| |||||||||
Sbjct: 4 gtactccctctgtttcaca-atgtaagtcattttagtatttgtcacatttatattgatgt 62
Query: 71 taat 74
||||
Sbjct: 63 taat 66
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 35 aagtcattctagcatttcccacattcatattgatgctaatgaatctagatagatata 91
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatata 54
Score = 89.7 bits (45), Expect = 9e-18
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 35 aagtcattctagcatttcccacattcatattgatgctaatgaatctaga 83
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctaga 49
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| | |||||||||| |||||||||||||||| |||||||||
Sbjct: 159 gtacttcctccgtttcacaaa-gtaagtcattttagcatttcccacatttatattgatgt 101
Query: 71 taatgaatctagataga 87
|||||||||||||||||
Sbjct: 100 taatgaatctagataga 84
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| | |||||||||| | |||||||||||||| ||||||||| |
Sbjct: 5 tactccctccgtttcacaaa-gtaagtcatttttgcatttcccacatttatattgatgtt 63
Query: 72 aatgaatctaga 83
|||||||||||
Sbjct: 64 tatgaatctaga 75
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 129 tacttcctccgtttcata-atgtaagtcattctagcatttcccacattcatattgatgtt 71
Query: 72 aatgaatctaga 83
|||| |||||||
Sbjct: 70 aatggatctaga 59
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 95.6 bits (48), Expect = 1e-19
Identities = 74/80 (92%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcat-tctagcatttcccacattcatattgatgc 70
|||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcccctctaacatttcccacattcatattgatgt 63
Query: 71 taatgaatctagatagatat 90
||||||||||||||||||||
Sbjct: 64 taatgaatctagatagatat 83
Score = 81.8 bits (41), Expect = 2e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 137 tacttcctccgtttcaca-atgtaagtcattctagcatttcccatattcatattgat 82
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 105 tagaatgacttacattgtgaaacggaggaagtaa 138
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagacattctagtatttcccacattcatattgatatt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 71.9 bits (36), Expect = 2e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||| |||| | | ||||||||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagtattttcactagaaatattgatgtt 63
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatata 83
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 95.6 bits (48), Expect = 1e-19
Identities = 58/60 (96%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcatttcccacgttcatattgatgct 63
Score = 60.0 bits (30), Expect = 8e-09
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccaca 57
|||||||||||||| ||| |||||| ||||||||||||||||||||
Sbjct: 107 tactccctccgttttaca-atgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 8 gaagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattga 67
|||||||||||||||||||| | |||||||||||||||||||| || |||||||||| ||
Sbjct: 1 gaagtactccctccgtttcata-atgtaagtcattctagcattaccaacattcatataga 59
Query: 68 tgctaatgaatctaga 83
|| |||||||||||||
Sbjct: 60 tgttaatgaatctaga 75
Score = 67.9 bits (34), Expect = 3e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | |||||||||||||||||||| ||||||| |||| |||| |
Sbjct: 158 tacttcctccgtttcata-atgtaagtcattctagcattgcccacatatatatagatgtt 100
Query: 72 aatgaatctagata 85
||||||| ||||||
Sbjct: 99 aatgaatttagata 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaag 124
||||||||||||| || ||||| ||||||||||||
Sbjct: 126 tagaatgacttacattatgaaacggaggaagtaag 160
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | ||||||||||||||||||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcata-atgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 87.7 bits (44), Expect = 3e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | ||||||||||||||| ||| ||||| ||||||||||||
Sbjct: 158 tactccctccgtttcata-atgtaagtcattctactattgttcacatccatattgatgct 100
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 99 aatgaatctagatagatata 80
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||| |
Sbjct: 157 tactccctccgtttcaca-atgtaagtcattctaatattttccacattcatattgatgtt 99
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 98 aatgaatctaga 87
Score = 87.7 bits (44), Expect = 3e-17
Identities = 73/80 (91%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||| |
Sbjct: 5 tactccctccgttttaca-atgtaagttattctagt-tttcccacattcatattgatatt 62
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 63 aatgaatctagatagatata 82
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || ||||||||| |||||||| ||||||| |||||||||||
Sbjct: 152 tactccctccgtttcaca-atataagtcattttagcattttccacatttatattgatgct 94
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 93 aatgaatctaga 82
Score = 85.7 bits (43), Expect = 1e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| |||||||||||| ||||||||| |||||| | ||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattttagcatttctcacatttacattgatgc 62
Query: 71 taatgaatctagata 85
|||||||| ||||||
Sbjct: 63 taatgaatttagata 77
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| |||||||||||| | || |
Sbjct: 158 tactccctccgtttcaca-atgtaagtcattctagcattttccacattcatataggtgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 31 atgtaagtcattctagcatttcccacattcatattgatgctaatgaatctagatagatat 90
||||||||||||||| |||||||||||||||||| | || ||||||||||||||| ||||
Sbjct: 23 atgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatatat 82
Query: 91 aga 93
|||
Sbjct: 83 aga 85
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagtaa 159
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | ||
Sbjct: 130 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatattagtact 72
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 71 aatgaatctaga 60
Score = 67.9 bits (34), Expect = 3e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagttattctagcatttctcacattcatat 56
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 98 tagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | ||||||||||||||||||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcata-atgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 87.7 bits (44), Expect = 3e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||||||||||| |||| ||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcata-atgtaagtcattctagtatttttcacatccatatcgatgct 100
Query: 72 aatgaatctagatagatata 91
|||||||||||||| |||||
Sbjct: 99 aatgaatctagataaatata 80
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||| |
Sbjct: 149 tactccctccgtttcaca-atataagtcattttagcatttcccatattcatattgatgtt 91
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 90 aatgaatctaga 79
Score = 63.9 bits (32), Expect = 5e-10
Identities = 72/83 (86%), Gaps = 8/83 (9%)
Strand = Plus / Plus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||| |||| |||||||| ||||||||| |||||||||||||||| ||||||
Sbjct: 2 aagtacttcctctgtttcaca-atgtaagtc-ttctagcatttcccac------attgat 53
Query: 69 gctaatgaatctagatagatata 91
| |||||||||||||||||||||
Sbjct: 54 gttaatgaatctagatagatata 76
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||||||||||| |||| |||||||||||| |||||||||||| ||| |||||||||||
Sbjct: 5 tactccctccgttccaca-atgtaagtcattatagcatttcccatatttatattgatgct 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 83.8 bits (42), Expect = 5e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcaca-atgtaagacattctagcatttcccacattcatattgatg 76
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 135 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatatttatatt 77
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 76 aatgaatctaga 65
Score = 83.8 bits (42), Expect = 5e-16
Identities = 52/54 (96%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatatt 65
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccatttcaca-atgtaagtcattctagcatttcccacattcatatt 57
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaatggagggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 103 tagaatgacttacattgtgaaacggaggaagta 135
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 6e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 114 tacttcctccgtttcaca-atgtaagtcattctagcatttcctacattcatattgatgtt 56
Query: 72 aatgaat 78
|||||||
Sbjct: 55 aatgaat 49
Score = 87.7 bits (44), Expect = 3e-17
Identities = 51/52 (98%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcat 62
||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 93.7 bits (47), Expect = 6e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 131 tactccctccgtttcaca-atgtaagtcattctatcatttttcacgttcatattgatgct 73
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 72 aatgaatctag 62
Score = 52.0 bits (26), Expect = 2e-06
Identities = 45/50 (90%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 15 tccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
||||||||||||||| || |||||||||||| |||||| || ||||||||
Sbjct: 8 tccctccgtttcaca-atataagtcattctatcatttctcaaattcatat 56
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 89 atagaatgacttaccttgtgaaatggaggaagta 122
|||||||||||||| |||||||| ||||| ||||
Sbjct: 98 atagaatgacttacattgtgaaacggagggagta 131
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 93.7 bits (47), Expect = 6e-19
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcatttcccacatttatattgatatt 63
Query: 72 aatgaatctagatagatat 90
||| ||| |||||| ||||
Sbjct: 64 aataaatttagataaatat 82
Score = 81.8 bits (41), Expect = 2e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||| ||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcaca-atataagtcattctagcatttcccacattcatattgat 81
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtaa 4
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 93.7 bits (47), Expect = 6e-19
Identities = 57/59 (96%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagtcattctagcatttcccacattcatatcgatg 61
Score = 89.7 bits (45), Expect = 9e-18
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||| |
Sbjct: 130 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcatatcgatgtt 72
Query: 72 aatga 76
|||||
Sbjct: 71 aatga 67
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 98 tagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 91.7 bits (46), Expect = 2e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcata-atgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 91.7 bits (46), Expect = 2e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| |
Sbjct: 149 tactccctcggtttcaca-atgtaagtcattctagcatttctcacattcatattgatgtt 91
Query: 72 aatgaa 77
||||||
Sbjct: 90 aatgaa 85
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 91.7 bits (46), Expect = 2e-18
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 34 taagtcattctagcatttcccacattcatattgatgctaatgaatctaga 83
||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctaga 55
Score = 87.7 bits (44), Expect = 3e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 31 atgtaagtcattctagcatttcccacattcatattgatgctaatgaat 78
|||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2 atgtaagtcattctagcatttctcacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 91.7 bits (46), Expect = 2e-18
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| ||||| | ||||||||| |
Sbjct: 139 tactccctccgtttcaca-atgtaagtcattctagcattttccacaattatattgatgtt 81
Query: 72 aatgaatctagatagata 89
||| |||||| |||||||
Sbjct: 80 aataaatctatatagata 63
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||||||| ||||||| |||||||||||| |||||||| |||| | ||||||||
Sbjct: 4 gtactccctccatttcaca-atgtaagtcattttagcatttttcacaattatattgat 60
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 93 aatgacttaccttgtgaaatggaggaagta 122
|||||||||| |||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 91.7 bits (46), Expect = 2e-18
Identities = 56/58 (96%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcattttccacattcatattgatg 61
Score = 91.7 bits (46), Expect = 2e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || |||||||||||||||| ||||||||||||||||||| |
Sbjct: 132 tacttcctccgtttcaca-atataagtcattctagcatatcccacattcatattgatgtt 74
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 73 aatgaatcta 64
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 91.7 bits (46), Expect = 2e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| |
Sbjct: 2 aagtacttcctccgtttcaca-atgtaagtcattctagcatttctcacattcatattgct 60
Query: 69 gctaatgaat 78
| ||||||||
Sbjct: 61 gttaatgaat 70
Score = 73.8 bits (37), Expect = 5e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
|||||||||||||||||| ||||||||||||||||||||| ||| ||||||||
Sbjct: 130 tactccctccgtttcaca-atgtaagtcattctagcattttccatattcatat 79
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 91.7 bits (46), Expect = 2e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcaca-atgcaagtcattctagcatttcccacattcatattgatgtt 63
Query: 72 aatgaa 77
||||||
Sbjct: 64 aatgaa 69
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 89.7 bits (45), Expect = 9e-18
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 tccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgctaat 74
||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| |||
Sbjct: 135 tccctccgtttcaca-atgtaagtcattctagcatttctcacattcatatttatgtcaat 77
Query: 75 gaatctaga 83
|||||||||
Sbjct: 76 gaatctaga 68
Score = 85.7 bits (43), Expect = 1e-16
Identities = 53/55 (96%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 15 tccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 8 tccctccgtttcaca-atgtaagtcattctagcatttctcacattcatattgatg 61
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 89.7 bits (45), Expect = 9e-18
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 34 taagtcattctagcatttcccacattcatattgatgctaatgaatctagatag 86
|||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 26 taagtcattctagcattttccacattcatactgatgctaatgaatctagatag 78
Score = 83.8 bits (42), Expect = 5e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||
Sbjct: 138 tactccctccgtttcata-atgtaagtcattgtagcatttcccacattcatattgatg 82
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 89.7 bits (45), Expect = 9e-18
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 35 aagtcattctagcatttcccacattcatattgatgctaatgaatc 79
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 83.8 bits (42), Expect = 5e-16
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 38 tcattctagcatttcccacattcatattgatgctaatgaatc 79
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 89.7 bits (45), Expect = 9e-18
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
|||||||||| |||||| | |||||||||||||||| |||||||||||||||| |||||
Sbjct: 145 gtactccctctgtttcata-atgtaagtcattctagtatttcccacattcatagtgatgt 87
Query: 71 taatgaatctagatagatata 91
|||| |||||||||| |||||
Sbjct: 86 taataaatctagatatatata 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||||||||||||||||| |||||||||| ||||| |
Sbjct: 5 tacttcctccgtttcata-atgtaagtcattctagcatttttcacattcatagtgatgtt 63
Query: 72 aat 74
|||
Sbjct: 64 aat 66
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| || ||||| |||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggaggaagtaa 4
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 89.7 bits (45), Expect = 9e-18
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| || ||||||||||||| ||||| || ||| |||||||||
Sbjct: 4 gtacttcctccgtttcaca-atataagtcattctagtatttctcatatttatattgatga 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttc 52
||||||||||||||||| | |||||||||||| |||||||||
Sbjct: 129 gtactccctccgtttcata-atgtaagtcattgtagcatttc 89
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 89.7 bits (45), Expect = 9e-18
Identities = 55/57 (96%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atataagtcattctagcatttcccacattcatattgat 60
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 34 taagtcattctagcatttcccacattcatattga 67
||||||||||||||||||||||||||||||||||
Sbjct: 94 taagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||| ||||||||| || ||| |||||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattttagcatttctcatatttatattgatgct 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 81.8 bits (41), Expect = 2e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || ||||||||| |||||||| |||||||||||||||||||
Sbjct: 139 tactccctccgtttcaca-atataagtcattttagcattttccacattcatattgatgct 81
Query: 72 a 72
|
Sbjct: 80 a 80
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||||||||||||||| |||| |||||||| |||| |
Sbjct: 158 tactccctccgtttcata-atgtaagtcattctagcattacccatattcatatagatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 75.8 bits (38), Expect = 1e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | |||||||||||||||||||| ||||||| ||||| |||| |
Sbjct: 5 tacttcctccgtttcata-atgtaagtcattctagcattgcccacatacatatagatgtt 63
Query: 72 aatgaatctagata 85
||||||| ||||||
Sbjct: 64 aatgaatttagata 77
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 87.7 bits (44), Expect = 3e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||| |||||||| ||| | |||||||||| |
Sbjct: 130 tacttcctccgtttcaca-atgtaagtcattttagcatttttcacgtacatattgatgtt 72
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 71 aatgaatctagatagatata 52
Score = 60.0 bits (30), Expect = 8e-09
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
||||||||||||||| ||| |||||||||||| ||| |||||||||||| ||||
Sbjct: 4 gtactccctccgtttaaca-atgtaagtcattttagtatttcccacatttatat 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 93 aatgacttaccttgtgaaatggaggaagtaa 123
|||||||||| |||||||| |||||||||||
Sbjct: 101 aatgacttacattgtgaaacggaggaagtaa 131
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||| | |||||||||||| ||||||| ||||||||||||| ||||
Sbjct: 160 agtactccctccgtttcata-atgtaagtcattttagcattgcccacattcatatagatg 102
Query: 70 ctaatgaatcta 81
|||||||||||
Sbjct: 101 gtaatgaatcta 90
Score = 67.9 bits (34), Expect = 3e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||||||||||||| || |||| || ||||| |||| |
Sbjct: 5 tacttcctccgtttcata-atgtaagtcattctagccttacccatatgcatatagatgtt 63
Query: 72 aatgaatctagata 85
||||||||||||||
Sbjct: 64 aatgaatctagata 77
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| | ||||| |||| ||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcaca-atgtaagactttctaacattgcccacattcatatagatgct 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||| | ||||||| | || ||||||| ||||||||||||| |||||
Sbjct: 4 gtacttcctccgtttcata-atgtaagactttatagcattacccacattcatatagatgc 62
Query: 71 taatgaatcta 81
|||| ||||||
Sbjct: 63 taataaatcta 73
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | |||||||||||||||| ||||| |||||||||||||||| |
Sbjct: 5 tacttcctccgtttcata-atgtaagtcattctagtatttctcacattcatattgatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 67.9 bits (34), Expect = 3e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatatt 65
|||||||||| ||||| | |||||||||||||||||||||| ||||||||||||
Sbjct: 130 tactccctccatttcata-atgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 87.7 bits (44), Expect = 3e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||| ||||||||||||| ||||||||| ||||||||||| ||| ||||||||| ||
Sbjct: 137 aagtacttcctccgtttcaca-atgtaagtccttctagcattttccatattcatattaat 79
Query: 69 gctaatgaatctagat 84
| ||||||||||||||
Sbjct: 78 gttaatgaatctagat 63
Score = 65.9 bits (33), Expect = 1e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
|||||||||||||||| | ||||||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcata-atgtaagtcattctatcattttccacattcatat 56
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 85.7 bits (43), Expect = 1e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctaacattttccatattcatattgatgtt 63
Query: 72 aatgaatctagatag 86
||||||| |||||||
Sbjct: 64 aatgaatgtagatag 78
Score = 58.0 bits (29), Expect = 3e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||||||||||||||| | |||||||||||| ||| |||| || ||||||||||||
Sbjct: 139 aagtactccctccgtttcata-atgtaagtcattttagtatttttcatattcatattgat 81
Query: 69 g 69
|
Sbjct: 80 g 80
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 85.7 bits (43), Expect = 1e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
Sbjct: 126 tacttcctccgtttcaca-atgtaagtcattctagcatttccaacattcatattgatatt 68
Query: 72 aatgaat 78
|||||||
Sbjct: 67 aatgaat 61
Score = 83.8 bits (42), Expect = 5e-16
Identities = 52/54 (96%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagtcattctagcatttcccacgttcatat 56
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 94 tagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 13 actccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgcta 72
||||||||||||||| | |||||||||||||||||||||||||||||||||| || | ||
Sbjct: 157 actccctccgtttcata-atgtaagtcattctagcatttcccacattcatatggaggtta 99
Query: 73 atgaatctaga 83
||||||||||
Sbjct: 98 gtgaatctaga 88
Score = 79.8 bits (40), Expect = 8e-15
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | ||||||||||||||||||||||| | |||||||| || | |
Sbjct: 5 tactccctccgtttcata-atgtaagtcattctagcatttcctatattcatatagaggtt 63
Query: 72 aatgaatctagatagatata 91
| |||||||| |||||||||
Sbjct: 64 agtgaatctatatagatata 83
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 85.7 bits (43), Expect = 1e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcattttccacatttatattgatatt 63
Query: 72 aatgaatctagatagatat 90
||| ||| |||||| ||||
Sbjct: 64 aataaatttagataaatat 82
Score = 81.8 bits (41), Expect = 2e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||| ||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcaca-atataagtcattctagcatttcccacattcatattgat 81
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtaa 4
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 85.7 bits (43), Expect = 1e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 72 aatgaat 78
|||||||
Sbjct: 64 aatgaat 70
Score = 67.9 bits (34), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||| |||||||||| | ||||||||||||||||||||| ||| |||||||||||||
Sbjct: 129 tactctctccgtttcata-atgtaagtcattctagcattttccatattcatattgatg 73
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 1e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||| ||| | ||||||||| |
Sbjct: 130 tacttcctccgtttcaca-atgtaagtcattctagcatttttcacgtatatattgatgtt 72
Query: 72 aatgaatctagatagatat 90
|||||||||||||||||||
Sbjct: 71 aatgaatctagatagatat 53
Score = 67.9 bits (34), Expect = 3e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
||||||||||||||| ||| |||||||||||||||| ||||| |||||||||||
Sbjct: 4 gtactccctccgtttaaca-atgtaagtcattctagtatttctcacattcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 98 tagaatgacttacattgtgaaacggaggaagtaa 131
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 1e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||| ||||||| ||||| |||||||||||||||| |
Sbjct: 130 tacttcctccgtttcata-atgtaagccattctatcatttttcacattcatattgatgtt 72
Query: 72 aatgaatctagatagatat 90
|||||||||||||||||||
Sbjct: 71 aatgaatctagatagatat 53
Score = 81.8 bits (41), Expect = 2e-15
Identities = 51/53 (96%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
|||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 83.8 bits (42), Expect = 5e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||| ||||||||||| | ||||||||| |||||||||| ||||||||||||| ||||
Sbjct: 3 agtacttcctccgtttcata-atgtaagtctttctagcattgcccacattcatatagatg 61
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 62 ttaatgaatctaga 75
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 83.8 bits (42), Expect = 5e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||| ||||||||||| | ||||||||| |||||||||| ||||||||||||| ||||
Sbjct: 3 agtacttcctccgtttcata-atgtaagtctttctagcattgcccacattcatatagatg 61
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 62 ttaatgaatctaga 75
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 83.8 bits (42), Expect = 5e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattga 67
|||||||||||||||||||| |||||||||||||||||||||||||| || |||||||
Sbjct: 3 agtactccctccgtttcaca-atgtaagtcattctagcatttcccacgtttatattga 59
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 83.8 bits (42), Expect = 5e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||||||||||||||||| || |||||||||||| |
Sbjct: 126 tactccctccgtttcata-atgtaagtcattctagcatttctcatattcatattgatatt 68
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 67 aatgaatcta 58
Score = 60.0 bits (30), Expect = 8e-09
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatatt 65
|||| ||||||||||||| || |||||||||||||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcaca-atataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 34 taagtcattctagcatttcccacattcatattgatgctaatgaatctagatagatata 91
||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||||
Sbjct: 26 taagtcattctagtattttccatattcatattgatgctaatgaatttagatagatata 83
Score = 83.8 bits (42), Expect = 5e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||||||||||| |||| || |||||||||||| |||||| || |||||||||||||||
Sbjct: 158 tactccctccgttccaca-atataagtcattctaacatttctcatattcatattgatgct 100
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||||||||||||||| || | |||||||| |||| |
Sbjct: 158 tactccctccgtttcata-atgtaagtcattctagcattgcctatattcatatagatgtt 100
Query: 72 aatgaatctagata 85
||||||||||||||
Sbjct: 99 aatgaatctagata 86
Score = 75.8 bits (38), Expect = 1e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | |||||||||||||||||| | | ||||||||||| |||| |
Sbjct: 5 tacttcctccgtttcata-atgtaagtcattctagcaatgctcacattcatatggatgtt 63
Query: 72 aatgaatctagata 85
||||||||||||||
Sbjct: 64 aatgaatctagata 77
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 125 tactccctccgtttcaca-atgtaagttattctagcatttnccacattcatattgat 70
Score = 81.8 bits (41), Expect = 2e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 83.8 bits (42), Expect = 5e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagtatttctcacattcatattgatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||||||| |||||| | |||||||||||| || ||||| |||||| |||||||||
Sbjct: 143 tactccctctgtttcata-atgtaagtcattttaacatttttcacatttatattgatg 87
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 83.8 bits (42), Expect = 5e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || |||||||||||| |||||||||||||||||||||| |
Sbjct: 5 tactccctccgtttcaca-atataagtcattctattatttcccacattcatattgatgtt 63
Query: 72 aatgaa 77
||||||
Sbjct: 64 aatgaa 69
Score = 83.8 bits (42), Expect = 5e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||||||| |||||||||||| ||||||||| |
Sbjct: 151 tacttcctccgtttcaca-atgtaagtcattctagtatttcccacatttatattgatgtt 93
Query: 72 aatgaa 77
||||||
Sbjct: 92 aatgaa 87
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 119 tagaatgacttacattgtgaaacggaggaagta 151
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 83.8 bits (42), Expect = 5e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagttattctagcattttccacattcatattgatg 61
Score = 75.8 bits (38), Expect = 1e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||||||
Sbjct: 131 tacttcctccgtttcaca-atgtaagtcattctagcattttccatattcatattgatg 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 99 tagaatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 83.8 bits (42), Expect = 5e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || |||||||||||||||||||||||||| ||| ||||| |
Sbjct: 121 tactccctccgtttcaca-atctaagtcattctagcatttcccacatttatactgatgtt 63
Query: 72 aatgaa 77
||||||
Sbjct: 62 aatgaa 57
Score = 77.8 bits (39), Expect = 3e-14
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatatt 65
||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 83.8 bits (42), Expect = 5e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcatttctcacattcatattgatg 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcat 49
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 111 tactccctccgtttcaca-atgtaagtcaatctagcat 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 81.8 bits (41), Expect = 2e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 123 tactccctctgtttcaca-atgtaagtcattctagcacttcccacattcatattgat 68
Score = 65.9 bits (33), Expect = 1e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | |||||||||||| ||||| || ||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcata-atgtaagtcattttagcactttccacattcatattgatgtt 63
Query: 72 aatga 76
|||||
Sbjct: 64 aatga 68
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 2e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagttattctagcattttccacattcatattgat 60
Score = 81.8 bits (41), Expect = 2e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 125 tactccctccgtttcaca-atgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 81.8 bits (41), Expect = 2e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || |||||||||||||||||||||||||||| |||||| |
Sbjct: 135 tacttcctccgtttcaca-atataagtcattctagcatttcccacattcacattgatatt 77
Query: 72 aatgaatct 80
|||||||||
Sbjct: 76 aatgaatct 68
Score = 73.8 bits (37), Expect = 5e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||||||||||||||||| || ||||||||||||||||||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcaca-atataagtcattctagcatttcacacattcacattgat 60
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 81.8 bits (41), Expect = 2e-15
Identities = 51/53 (96%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattctagcatttcccacatttatat 56
Score = 79.8 bits (40), Expect = 8e-15
Identities = 47/48 (97%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacatt 59
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 149 tactccctccgtttcaca-atgtaagtcattctagcatttcccacatt 103
Score = 65.9 bits (33), Expect = 1e-10
Identities = 43/45 (95%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 20 ccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
|||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 98 ccgtttcaca-atgtaagtcattctagcatttcccacatttatat 55
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 79.8 bits (40), Expect = 8e-15
Identities = 47/48 (97%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacat 58
||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagtcattctagcatttcccacat 50
Score = 54.0 bits (27), Expect = 5e-07
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatt 50
|||||||||||||||||| |||||| |||||||||||||
Sbjct: 95 tactccctccgtttcaca-atgtaaatcattctagcatt 58
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| | |||||||||| |||| |||||| | ||||||
Sbjct: 158 tactccctccgtttcaca-atgtaagactttctagcattgcccaaattcatttagatgct 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 60.0 bits (30), Expect = 8e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||| | |||||||||| ||||||| ||||| ||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagactttctagcattgcccacatacatataaatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 79.8 bits (40), Expect = 8e-15
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||| ||||||||||||||||||| | |||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattttagcatttcccacattcatgtagatgtt 63
Query: 72 aatgaatc 79
||||||||
Sbjct: 64 aatgaatc 71
Score = 69.9 bits (35), Expect = 8e-12
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||| | ||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 157 gtactccctccgtttcata-atgcaagtcattttagcatttttcacattcatatagatgt 99
Query: 71 taatgaatcta 81
|||||||||||
Sbjct: 98 taatgaatcta 88
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| | |||||| ||| ||||||||||||| |||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagactttctagtattgcccacattcatatagatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||||| ||||||| | |||||| | | |||| |||||||| ||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagactttctagtactgcccatattcatatagatgt 62
Query: 71 taatgaatctaga 83
|||||||| ||||
Sbjct: 63 taatgaatttaga 75
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 79.8 bits (40), Expect = 8e-15
Identities = 50/52 (96%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcata 63
|||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 95 tacttcctccgtttcaca-atgtaagtcattctagcatttcccacattcata 45
Score = 60.0 bits (30), Expect = 8e-09
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttc 52
|||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 4 gtactccctctgtttcaca-atgtaagtcattctagcatttc 44
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 63 tagaatgacttacattgtgaaacggaggaagta 95
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 79.8 bits (40), Expect = 8e-15
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 35 aagtcattctagcatttcccacattcatattgatgctaatgaat 78
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 92 aagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 73.8 bits (37), Expect = 5e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcat 62
|||||||||||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 3 agtactccctccgtttcaca-atgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||||||||||||||| || | |||||||| |||| |
Sbjct: 5 tactccctccgtttcata-atgtaagtcattctagcattgcctatattcatatagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 75.8 bits (38), Expect = 1e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | |||||||||||||||||| | | ||||||||||| |||| |
Sbjct: 158 tacttcctccgtttcata-atgtaagtcattctagcaatgctcacattcatatggatgtt 100
Query: 72 aatgaatctagata 85
||||||||||||||
Sbjct: 99 aatgaatctagata 86
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||| |||||||| |||||||||||| ||||||||||||| |
Sbjct: 136 tacttcctccgtttcaca-atgcaagtcattttagcatttcccatattcatattgatgtt 78
Query: 72 aatgaatctaga 83
||| ||||||||
Sbjct: 77 aataaatctaga 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattca 61
||||| ||||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagttattctagtatttcccacattca 53
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 79.8 bits (40), Expect = 8e-15
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattga 67
|||| ||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 114 tacttcctccgtttcaca-atataagtcattctagcatttcccacattcatattga 60
Score = 73.8 bits (37), Expect = 5e-13
Identities = 54/57 (94%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
|||||||||||||||||| || |||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atataagtcattctagcattt-ccacattcatattgat 59
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | || |||||||||||| ||||| ||||||||||||||||| |
Sbjct: 139 tacttcctccgtttcata-atataagtcattctaacattttccacattcatattgatgtt 81
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 80 aatgaatctaga 69
Score = 60.0 bits (30), Expect = 8e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||| | ||||||||||||||||||||| |||||| || ||||||
Sbjct: 5 tactccctccgtttcata-atgtaagtcattctagcatttttcacatttatgttgatg 61
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | ||||||| | |||||||||| ||||||||||||| |||||
Sbjct: 158 tactccctccgtttcata-atgtaagactttctagcattgcccacattcatatatatgct 100
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 99 aatgaatctag 89
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 31 atgtaagtcattctagcatttcccacattcatattgatgctaatgaatctaga 83
||||||| | ||||||| || |||||||| |||| ||| ||||||||||||||
Sbjct: 23 atgtaagactttctagcgttgcccacatttatatagatactaatgaatctaga 75
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 77.8 bits (39), Expect = 3e-14
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatatt 65
||||| ||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 120 gtacttcctccgtttcaca-atataagtcattctagcatttcccacattcatatt 67
Score = 69.9 bits (35), Expect = 8e-12
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 19 tccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||||||||| || |||||||||||||||||||||| |||||||||||||
Sbjct: 12 tccgtttcaca-atataagtcattctagcatttcccatattcatattgatg 61
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 77.8 bits (39), Expect = 3e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||| | ||||||| | |||||||||| ||||||||||||| ||||
Sbjct: 141 gtactccctccgtttcata-atgtaagactttctagcattgcccacattcatatagatgt 83
Query: 71 taatgaatcta 81
|||||||||||
Sbjct: 82 taatgaatcta 72
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 77.8 bits (39), Expect = 3e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || ||||||||||||| ||| ||||||||| ||| ||| ||
Sbjct: 156 tactccctccgtttcaca-atataagtcattctaggattgcccacattcttatagatact 98
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 97 aatgaatctag 87
Score = 71.9 bits (36), Expect = 2e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 17 cctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgctaatga 76
||||||||||| | || ||||||||||||||||| ||||||||||||| |||| ||||||
Sbjct: 10 cctccgtttcata-atataagtcattctagcattgcccacattcatatagatgttaatga 68
Query: 77 atct 80
||||
Sbjct: 69 atct 72
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 75.8 bits (38), Expect = 1e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||| | || |||| | |||||||||| |||| |||||||| |||||
Sbjct: 141 gtactccctccgtttcata-atataagactttctagcattacccatattcatatagatgc 83
Query: 71 taatgaatctagat 84
||||||||||||||
Sbjct: 82 taatgaatctagat 69
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 34 taagtcattctagcatttcccacattcatattgatgctaatgaatctagat 84
|||||| |||||||||| | || |||||||| |||| ||||||||||||||
Sbjct: 26 taagtctttctagcattgctcatattcatatagatgttaatgaatctagat 76
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 1e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||| || ||||| |||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcaca-atataagttattctagcatttcccacattcacattgatg 61
Score = 58.0 bits (29), Expect = 3e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttc 52
|||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcaca-atgtaagtcattctagcatttc 87
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 94 tagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| | |||||||||| ||| ||||||||| |||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagactttctagcattgcccgcattcatatagatgtt 100
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||| | |||||||||| |||||||||| || ||||||
Sbjct: 5 tacttcctccgtttcata-atgtaagactttctagcattgcccacattcacatagatgct 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 75.8 bits (38), Expect = 1e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||||||||||||||| | ||||||| | |||||||||| ||||||| ||||| |||
Sbjct: 150 aagtactccctccgtttcata-atgtaagactttctagcattgcccacatacatatagat 92
Query: 69 gctaatgaatctag 82
| ||||||||||||
Sbjct: 91 gttaatgaatctag 78
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||| | |||||||||| | |||||||| | |||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagactttctagcattgctcacattcacttagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 75.8 bits (38), Expect = 1e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || ||||||||| ||| |||| ||||||||||||||||| |
Sbjct: 130 tacttcctccgtttcaca-atataagtcattttagtattttccacattcatattgatgtt 72
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 71 aatgaatcta 62
Score = 67.9 bits (34), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||| |||||||||||| | | |||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcatttttgtattttccacattcatattgatg 61
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 73.8 bits (37), Expect = 5e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 31 atgtaagtcattctagcatttcccacattcatattgatgctaatgaatctaga 83
|||||||||||||||||||| | ||||||||||| |||| |||||||||||||
Sbjct: 114 atgtaagtcattctagcattgcacacattcatatagatgttaatgaatctaga 62
Score = 58.0 bits (29), Expect = 3e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
|||||||||||||||| | |||||||||||||||||||| || | ||||||||
Sbjct: 5 tactccctccgtttcata-atgtaagtcattctagcattacctatattcatat 56
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| || ||||||||||||||||
Sbjct: 100 tagaatgacttacattatgaaatggaggaagta 132
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 73.8 bits (37), Expect = 5e-13
Identities = 47/49 (95%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacatt 59
||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 117 gtactccctccgtttcaca-atgtaagtcattctagcattttccacatt 70
Score = 58.0 bits (29), Expect = 3e-08
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattc 60
|||||||||||||||||| ||| ||||||||||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcaca-atgcaagtcattctagcattttccatattc 52
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 5e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||| | ||||||| | |||||||||| || | |||||||||||||
Sbjct: 3 agtactccctccgtttcata-atgtaagactttctagcattgcctatattcatattgatg 61
Query: 70 ctaatgaatctag 82
||||||||||||
Sbjct: 62 ttaatgaatctag 74
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||| | |||||||||| |||||||||||| ||| |
Sbjct: 156 tacttcctccgtttcata-atgtaagactttctagcattgtccacattcatataaatgtt 98
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 97 aatgaatctaga 86
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 73.8 bits (37), Expect = 5e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 43 ctagcatttcccacattcatattgatgctaatgaatctagatagatata 91
|||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1 ctagcatttcccacgttcatattgatattaatgaatctagatagatata 49
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 43 ctagcatttcccacattcatattgatgctaatgaatctagat 84
|||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 91 ctagcatttcccacgttcatattgatattaatgaatctagat 50
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||| ||||||||||| |||||||||||| |||| |
Sbjct: 137 tactccctccgtttcata-atgtaagttattctagcattgtccacattcatatagatgtt 79
Query: 72 aatgaatctaga 83
||| ||||||||
Sbjct: 78 aataaatctaga 67
Score = 58.0 bits (29), Expect = 3e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | |||||||| ||||||||||| |||||||||| || ||||||
Sbjct: 5 tacttcctccgtttcata-atgtaagttattctagcattgcccacattcacatagatgct 63
Query: 72 a 72
|
Sbjct: 64 a 64
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | ||||||| | |||||||||| ||||||||||||| |||| |
Sbjct: 5 tactccctccgtttcata-atgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 72 aatgaatctaga 83
||||||| ||||
Sbjct: 64 aatgaatttaga 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||||||||||||||| | ||||||| | |||||||||| ||||||||||||| ||||
Sbjct: 143 gtactccctccgtttcata-atgtaagactttctagcattgcccacattcatatagatg 86
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcat 62
||||||||||||||||||| |||||||||||| ||||||||||| |||||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagtcattttagcatttcccgcattcat 54
Score = 60.0 bits (30), Expect = 8e-09
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccaca 57
|||| ||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 108 tacttcctccgtttcaca-atgtaagtcattctagcattttccaca 64
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 76 tagaatgacttacattgtgaaacggaggaagta 108
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| | |||||| ||| |||| |||||||| |||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagactttctagtattgcccatattcatatagatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
|||||||||||||||||| |||||||| | |||||| | | |||| |||||||| ||||
Sbjct: 4 gtactccctccgtttcac-catgtaagactttctagtactgcccatattcatatagatgt 62
Query: 71 taatgaatctaga 83
|||||||| ||||
Sbjct: 63 taatgaatttaga 75
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| | |||||||||| |||||||||||| |||| |
Sbjct: 140 tactccctccgtttcaca-atgtaagactttctagcattgtccacattcatatagatgtt 82
Query: 72 aatgaatctaga 83
||| ||||||||
Sbjct: 81 aataaatctaga 70
Score = 44.1 bits (22), Expect = 5e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||| ||||||| | || ||||||| ||| |||||||| ||||
Sbjct: 5 tactccctccgtttcaca-atgtaagactttttagcattatccatattcatatagatg 61
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||||||| |||||| | |||||| ||||||||||||| ||||||| ||||| |||| |
Sbjct: 132 tactccctctgtttcata-atgtaaatcattctagcattgcccacatgcatatagatgtt 74
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 73 aatgaatctaga 62
Score = 50.1 bits (25), Expect = 7e-06
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
|||| ||||||||||| | |||||||||||||||||||| |||| || |||||
Sbjct: 5 tacttcctccgtttcata-atgtaagtcattctagcattacccatatgcatat 56
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 8 gaagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattga 67
||||||||||||| |||||| | ||||||| | |||||||||| |||||||||||| ||
Sbjct: 136 gaagtactccctctgtttcata-atgtaagactttctagcattgtccacattcatataga 78
Query: 68 tgctaatgaatctaga 83
|| |||||||||||||
Sbjct: 77 tgttaatgaatctaga 62
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 71.9 bits (36), Expect = 2e-12
Identities = 62/68 (91%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattctagcattt-tcacatccatattgatgt 61
Query: 71 taatgaat 78
||||||||
Sbjct: 62 taatgaat 69
Score = 56.0 bits (28), Expect = 1e-07
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Minus
Query: 16 ccctccgtttcacacatgtaagtcattctagcattt 51
|||||||||||||| |||||||||||||||||||||
Sbjct: 108 ccctccgtttcaca-atgtaagtcattctagcattt 74
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| | | |||||||| | ||||||||||| |||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagacttcctagcattgctcacattcatatagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 69.9 bits (35), Expect = 8e-12
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| | || || |||| |||||||||| || |||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagactttttaacattgcccacattcacatagatgtt 100
Query: 72 aatgaatctagatagatat 90
|||||||||||||| ||||
Sbjct: 99 aatgaatctagatatatat 81
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||| | |||||||||| ||||||||||||| |||| |
Sbjct: 134 tacttcctccgtttcaca-atgtaagactttctagcattgcccacattcatatagatgtt 76
Query: 72 aatgaatctaga 83
||| ||||||||
Sbjct: 75 aataaatctaga 64
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||| | |||||||||| ||||||||||||| |||| |
Sbjct: 158 tacttcctccgtttcata-atgtaagactttctagcattgcccacattcatatagatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||| | ||||||| | || ||||||| | ||||||||||| ||||
Sbjct: 4 gtactccctccgtttcata-atgtaagactttttagcattcctcacattcatatagatgt 62
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 63 taatgaatctaga 75
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||||||||||||| |||||| ||||| ||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcatttctcacatttatattaatgtt 63
Query: 72 aatg 75
||||
Sbjct: 64 aatg 67
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatt 50
|||||| |||||| |||| ||||||||||||||||||||
Sbjct: 101 tactccttccgttccaca-atgtaagtcattctagcatt 64
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||| | |||||||||| ||||||||||||| |||| |
Sbjct: 5 tacttcctccgtttcata-atgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||| | ||||||| | || ||||||| | ||||||||||| ||||
Sbjct: 159 gtactccctccgtttcata-atgtaagactttttagcattgctcacattcatatagatgt 101
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 100 taatgaatctaga 88
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||||| |||||| ||| ||||||||||||| |||| |
Sbjct: 5 tacttcctccgtttcata-atgtaagtctttctagtattgcccacattcatatagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | ||||||| | |||||||||| | || |||||||| |||| |
Sbjct: 158 tactccctccgtttcata-atgtaagactttctagcattgctcatattcatatagatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 69.9 bits (35), Expect = 8e-12
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||| ||||||| |||||| ||||| |||||||| || ||| |||||||| |
Sbjct: 107 gtactccctccatttcaca-atgtaaatcattttagcatttttcatatttatattgatac 49
Query: 71 taatgaatctagata 85
|||||||||||||||
Sbjct: 48 taatgaatctagata 34
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 69.9 bits (35), Expect = 8e-12
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||||||||||||||||| |||||||||||| ||||||||| || ||| |||||||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagtcattttagcatttctcatatttatattgatg 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||| ||||||||||||| || ||||||||| ||||||||| || ||| |||||||||
Sbjct: 122 tacttcctccgtttcaca-atataagtcattttagcatttctcatatttatattgatg 66
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 69.9 bits (35), Expect = 8e-12
Identities = 45/47 (95%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacat 58
|||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtttcata-atgtaagtcattctagcatttcccacat 83
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 69.9 bits (35), Expect = 8e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctaga 83
|||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 130 ttctagcattgcccacattcatatagatgctaatgaatctaga 88
Score = 44.1 bits (22), Expect = 5e-04
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | | |||| | |||||||||| |||||| |||||| |||| |
Sbjct: 5 tactccctccgtttcata-ttataagactttctagcattgcccacaatcatatagatgtt 63
Query: 72 aatgaa 77
||||||
Sbjct: 64 aatgaa 69
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 69.9 bits (35), Expect = 8e-12
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 17 cctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgctaatga 76
||||||||||||| || ||||||||| |||||||| || ||||||||||||| ||||||
Sbjct: 127 cctccgtttcaca-atataagtcattttagcattttccgtattcatattgatgataatga 69
Query: 77 atctaga 83
|||||||
Sbjct: 68 atctaga 62
Score = 61.9 bits (31), Expect = 2e-09
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 22 gtttcacacatgtaagtcattctagcatttcccacattcatat 64
|||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 15 gtttcaca-atgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 69.9 bits (35), Expect = 8e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 39 cattctagcatttcccacattcatattgatgctaatgaatctagatagatataga 93
||||||| |||||||||||||||||| | || ||||||||||||||| |||||||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatataga 48
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 39 cattctagcatttcccacattcatattgatgctaatgaatctaga 83
||||||||||||| |||||||||||| | || |||||||||||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctaga 45
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 69.9 bits (35), Expect = 8e-12
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
||||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||||
Sbjct: 160 gtactccctccgtttcagat-tataagactttctagcattgcccacattcatatagatgt 102
Query: 71 taatgaatctagata 85
|||||||||||||||
Sbjct: 101 taatgaatctagata 87
Score = 44.1 bits (22), Expect = 5e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||||
Sbjct: 5 tactccctccgtttcatat-tataagactttctagcattacccacattcatatagatg 61
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 69.9 bits (35), Expect = 8e-12
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| |||||||||||| ||| |||| ||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattttagtattttccacattcatattgatgtt 63
Query: 72 aat 74
|||
Sbjct: 64 aat 66
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 93 aatgacttaccttgtgaaatggaggaagtaa 123
|||||||||| |||||||| |||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 69.9 bits (35), Expect = 8e-12
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||||||||||||||||| ||| || ||||||||| |
Sbjct: 131 tacttcctccgtttcaca-atgtaagtcattctagcatttttcacgtttatattgatgtt 73
Query: 72 aatgaat 78
|||||||
Sbjct: 72 aatgaat 66
Score = 58.0 bits (29), Expect = 3e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcattt 51
||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagtcattttagcattt 43
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 99 tagaatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 67.9 bits (34), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||| |||||||||||| ||| |||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattatagtatttttcacattcatattgatg 61
Score = 56.0 bits (28), Expect = 1e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattga 67
|||||||||| ||||| | |||||||||||||||| |||| ||||||||||||||
Sbjct: 116 tactccctccatttcata-atgtaagtcattctagtatttttcacattcatattga 62
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 43 ctagcatttcccacattcatattgatgctaatgaatctagatagat 88
||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctagacagat 43
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 47 catttcccacattcatattgatgctaatgaatctaga 83
||||||||||||||||||||||| ||||||||||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctaga 41
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 67.9 bits (34), Expect = 3e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||||||| |||||||| ||||||| | |||||||||| ||||||||||| | |||| |
Sbjct: 5 tactccctctgtttcaca-atgtaagactttctagcattacccacattcatttagatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 67.9 bits (34), Expect = 3e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatatt 65
|||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||
Sbjct: 109 tacttcctccgtttcaca-atgtaagtcattttagtatttcccacattcatatt 57
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 93 aatgacttaccttgtgaaatggaggaagtaaga 125
|||||||||| |||||||| |||||||||||||
Sbjct: 80 aatgacttacattgtgaaacggaggaagtaaga 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcatt 42
||||||||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtttcaca-atgtaagtcatt 34
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||||||||||||||||||| || ||| |||| |||| |
Sbjct: 5 tactccctccgtttcata-atgtaagtcattctagcatttctcatattgatatagatgtt 63
Query: 72 aatgaatcta 81
| ||||||||
Sbjct: 64 agtgaatcta 73
Score = 48.1 bits (24), Expect = 3e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||||||| |||||| | |||||||||||| |||||||| |||||||| | |||| |
Sbjct: 158 tactccctctgtttcata-atgtaagtcattgtagcatttttcacattcacttggatgtt 100
Query: 72 aatgaatctaga 83
| ||||||||||
Sbjct: 99 agtgaatctaga 88
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 67.9 bits (34), Expect = 3e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || |||| | |||||||||| ||||||| ||||| |||| |
Sbjct: 136 tactccctccgtttcaca-atataagactttctagcattacccacatacatatagatgtt 78
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 77 aatgaatcta 68
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 67.9 bits (34), Expect = 3e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || |||| | |||||||||| ||||||| ||||| |||| |
Sbjct: 5 tactccctccgtttcaca-atataagactttctagcattacccacatacatatagatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||||| ||||||| | |||||||||| ||||||| ||| | ||||
Sbjct: 160 agtactccctccgtttcaca-atgtaagactttctagcattgcccacatacatttagatg 102
Query: 70 ctaatgaatctaga 83
|||| ||||||||
Sbjct: 101 ttaataaatctaga 88
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 67.9 bits (34), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||| | ||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 5 tactccctccgtttcata-atgtaagtcattctaacatttctcacattcatatggatg 61
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||| | | ||||||||||||||| ||||| |||||||| ||| |||| |
Sbjct: 138 tactccctccgttttata-atgtaagtcattctaacattttccacattcgtatggatgtt 80
Query: 72 aatgaatctaga 83
| ||||||||||
Sbjct: 79 agtgaatctaga 68
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctagata 85
|||||||||| ||||||||||||| |||| |||||||||||||||
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctagata 49
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctaga 83
||||| |||| ||||||||||||| |||| |||||||||||||
Sbjct: 108 ttctaacattgcccacattcatatggatgttaatgaatctaga 66
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 47 catttcccacattcatattgatgctaatgaatctaga 83
||||||||||||||||||||||||||||||| |||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactaga 41
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 47 catttcccacattcatattgatgctaatgaatctaga 83
|||||||||||||||||||||||||||| ||||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctaga 76
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 65.9 bits (33), Expect = 1e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 19 tccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgctaatgaat 78
||||||||||| ||||||| | |||||||||| ||||||||||||| ||| |||||||||
Sbjct: 119 tccgtttcaca-atgtaagactttctagcattgcccacattcatatggatactaatgaat 61
Query: 79 ctaga 83
||||
Sbjct: 60 ttaga 56
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||||||||||||||||| ||||||| | |||||||||| ||| || ||||| |||
Sbjct: 161 aagtactccctccgtttcaca-atgtaagactttctagcattgtccatatacatatagat 103
Query: 69 gctaatgaatcta 81
| |||||||||||
Sbjct: 102 gttaatgaatcta 90
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||| | |||||||||| ||||||||||| | | || |
Sbjct: 5 tacttcctccgtttcaca-atgtaagactttctagcattacccacattcatttagttgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| ||||||
Sbjct: 138 tactccctccgtttcatat-tataagactttctatcattgcccacattcatatagatgct 80
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 79 aatgaatctaga 68
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 63.9 bits (32), Expect = 5e-10
Identities = 94/112 (83%), Gaps = 7/112 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||| |||||||||||| |||| |||||| ||||||||
Sbjct: 108 tacttcctccgtttcaca-atgcaagtcattctagtatttttcacatttatattgat--- 53
Query: 72 aatgaatctagatagatatagaatgacttaccttgtgaaatggaggaagtaa 123
|| |||||||| | ||||||||||||||| |||||||| ||||| |||||
Sbjct: 52 -attaatctagaca--tatagaatgacttacattgtgaaacggagggagtaa 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattcta 45
|||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcaca-atgtaagtcattcta 37
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| | || ||| ||| |||||||||||| |||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagactttttaggattgtccacattcatatagatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 56.0 bits (28), Expect = 1e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||| | || |||| | |||||| ||| |||| |||||||| ||||
Sbjct: 3 agtactccctccgtttcata-atataagactttctagtattgcccatattcatatagatg 61
Query: 70 ctaatgaatctagata 85
||||||| |||||||
Sbjct: 62 ttaatgaacctagata 77
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 31 atgtaagtcattctagcatttcccacattcatattgatgctaatgaatctag 82
||||||| | |||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 2 atgtaagactttctagcattgcccacattcatatctatgctaatgaatctag 53
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 31 atgtaagtcattctagcatttcccacattcatattgatgctaatgaatctaga 83
||||||| | ||||| |||| ||||||||||||| ||||| ||||||||||||
Sbjct: 119 atgtaagactttctaacattgcccacattcatatagatgcaaatgaatctaga 67
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||| | |||||||||| |||||||||| | |||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagactttctagcattatccacattcatttagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 63.9 bits (32), Expect = 5e-10
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcata 63
|||| ||||||||||||| |||||||||||||||| |||| |||||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagtattttccacattcata 55
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| || ||||||||||||| ||||| | ||| ||||| || |
Sbjct: 139 tacttcctccgtttcaca-atataagtcattctaggatttctctcatccatataattgtt 81
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 80 aatgaatctaga 69
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 63.9 bits (32), Expect = 5e-10
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| |||||||||| ||||||||||||| ||||||
Sbjct: 120 tactccctccgtttcaca-atgtaagagtttctagcattgcccacattcatatagatgct 62
Score = 54.0 bits (27), Expect = 5e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||| ||||||||||||| ||||||| | ||||||| || ||||||||||||| ||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagactttctagcgttgcccacattcatatagatg 61
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||| | |||||||||| |||| |||||| | |||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagactttctagcattgcccatattcatttagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 60.0 bits (30), Expect = 8e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| | |||||| ||| ||||| | ||||| |||| |
Sbjct: 158 tactccctccgtttcaca-atgtaagactttctagtattgcccacgtacatatggatgtt 100
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| | || ||| ||| |||||||||||| |||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagactttttaggattgtccacattcatatagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 56.0 bits (28), Expect = 1e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||||||||||||||||| | || |||| | |||||| ||| |||| |||||||| ||||
Sbjct: 160 agtactccctccgtttcata-atataagactttctagtattgcccatattcatatagatg 102
Query: 70 ctaatgaatctagata 85
||||||| |||||||
Sbjct: 101 ttaatgaacctagata 86
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||||||||||||||| | ||||||| | |||||||||| ||||||||||||| ||||
Sbjct: 4 gtactccctccgtttcata-atgtaagactttctagcattgcccacattcatatagatg 61
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | |||||| | || ||||||| ||||||||||||| |||| |
Sbjct: 142 tactccctccgtttcata-atgtaaaactttttagcattgcccacattcatatagatgtt 84
Query: 72 aatgaatctaga 83
||||||| ||||
Sbjct: 83 aatgaatttaga 72
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 61.9 bits (31), Expect = 2e-09
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacat 58
|||| |||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgttccaca-atgtaagtcattctagcatttcccacat 50
Score = 58.0 bits (29), Expect = 3e-08
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagc 47
||||||||||||||||||| |||||||||||||||||
Sbjct: 95 gtactccctccgtttcaca-atgtaagtcattctagc 60
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 15 tccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgctaat 74
||||||||||||||| || ||||||||||||||||||| || || |||||||| ||||
Sbjct: 8 tccctccgtttcaca-atataagtcattctagcatttctcatatagatattgatattaat 66
Query: 75 gaatcta 81
|||||||
Sbjct: 67 gaatcta 73
Score = 54.0 bits (27), Expect = 5e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
||||| ||||||||||||| || ||||||||| |||||||| ||||||||| ||||||
Sbjct: 138 gtacttcctccgtttcaca-atataagtcattttagcatttttcacattcatgttgatg 81
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctagatagatata 91
|||||||||| ||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatata 59
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctag 82
|||||||||| ||||||||||||| |||| ||||||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctag 65
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctaga 83
|||||||||| ||||||||||||| |||| |||||||||||||
Sbjct: 98 ttctagcattgcccacattcatatagatgttaatgaatctaga 56
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 8e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||| | |||||||||| | ||||| ||||| |||| |
Sbjct: 158 tacttcctccgtttcaca-atgtaagactttctagcattgctcacatacatatagatgtt 100
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 60.0 bits (30), Expect = 8e-09
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatatt 65
|||| ||||||||||||| |||||||| ||| ||| ||||||||||||||||||
Sbjct: 140 tacttcctccgtttcaca-atgtaagttattgtagaatttcccacattcatatt 88
Score = 44.1 bits (22), Expect = 5e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatatt 65
|||| ||||||||||||| |||||||| ||| || ||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagttattgtataatttctcacattcatatt 57
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 60.0 bits (30), Expect = 8e-09
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 18 ctccgtttcacacatgtaagtcattctagcatttcccacatt 59
|||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 83 ctccgtttcaca-atgtaagtcattctagcatttcctacatt 43
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctag 46
|||| ||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctag 38
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||| ||||||
Sbjct: 57 tagaatgacttacattgtgaaacggagtaagtaa 90
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 60.0 bits (30), Expect = 8e-09
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttc 52
||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcaca-atgtaagtcattctagcatttc 44
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 60.0 bits (30), Expect = 8e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatg 69
|||| ||||||||| ||| || ||||||||||||||||||| |||||| |||||||||
Sbjct: 93 tacttcctccgttttaca-atataagtcattctagcatttctcacatttatattgatg 37
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctag 82
|||||||||| ||||||||||||| |||| ||||||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctag 65
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctaga 83
|||||||||| |||||||||||| ||| |||||||||||||
Sbjct: 9 ttctagcattgtccacattcatatatatgttaatgaatctaga 51
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctagatagatat 90
|||||||||| ||||||||||||| |||| ||||||||||| ||| ||||
Sbjct: 33 ttctagcattgcccacattcatatagatgttaatgaatctatatatatat 82
Score = 60.0 bits (30), Expect = 8e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| |||| |
Sbjct: 160 tactccctccgtttcatat-tataagactttctagcattgcccacattcatatagatgtt 102
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 101 aatgaatcta 92
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctag 82
|||||||||| ||||||||||||| |||| ||||||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctag 65
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctag 82
|||||||||| |||| |||||||| ||| ||||||||||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctag 50
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 60.0 bits (30), Expect = 8e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||| ||||| | ||||||| | |||||||||| |||||||||||| |||| |
Sbjct: 5 tactccctccatttcata-atgtaagactttctagcattgtccacattcatatagatgtt 63
Query: 72 aatgaatctagata 85
||| ||||||||||
Sbjct: 64 aataaatctagata 77
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatcta 81
|||||||||| ||||||||||||| |||| |||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 58.0 bits (29), Expect = 3e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 tccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgctaat 74
||||||||||||| | ||||||| | |||||||||| |||||||||||| |||| |||
Sbjct: 105 tccctccgtttcata-atgtaagactttctagcattgtccacattcatatagatgttaac 47
Query: 75 gaatctaga 83
|||||||||
Sbjct: 46 gaatctaga 38
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 58.0 bits (29), Expect = 3e-08
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattc 60
|||| ||||||||||||| |||||||||||||||||| || ||||||||
Sbjct: 5 tacttcctccgtttcaca-atgtaagtcattctagcactttccacattc 52
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatcta 81
|||||||||| ||||||||||||| |||| |||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||||||||||||||||| ||||||| | |||||||||| | || || ||||| ||
Sbjct: 2 aagtactccctccgtttcaca-atgtaagactttctagcattgctcatatacatatagac 60
Query: 69 gctaatgaatcta 81
| |||||||||||
Sbjct: 61 gttaatgaatcta 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||| | || ||||||| |||| |||||| | |||| |
Sbjct: 158 tacttcctccgtttcaca-atgtaagactttttagcattgcccatattcatttagatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgat 68
||||||| ||||||||||| | ||| ||| | |||||||||| ||||||||||| | |||
Sbjct: 2 aagtacttcctccgtttcata-atgcaagactttctagcattacccacattcatttagat 60
Query: 69 gctaatgaatcta 81
| |||||||||||
Sbjct: 61 gttaatgaatcta 73
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcattt 51
|||||||||||||||||| |||||| ||||||||||||||
Sbjct: 104 tactccctccgtttcaca-atgtaaatcattctagcattt 66
Score = 46.1 bits (23), Expect = 1e-04
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 9 aagtactccctccgtttcacacatgtaagtcattctagcattt 51
||||||||||| ||||||||| || ||||||||||||| ||||
Sbjct: 2 aagtactcccttcgtttcaca-atataagtcattctagtattt 43
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 43 ctagcatttcccacattcatattgatgctaatgaatctagatagatat 90
|||||||| ||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctagatatatat 43
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||| | ||||||| | |||||||||| | |||||||||| |||| |
Sbjct: 5 tacttcctccgtttcata-atgtaagactttctagcattgtctacattcatatagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | ||||||| | |||||| || |||||||||||| |||| |
Sbjct: 158 tactccctccgtttcata-atgtaagactttctaggtttgtccacattcatatagatgtt 100
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | ||||||||||||||| ||| |||| || ||||| ||| |
Sbjct: 5 tactccctccgtttcata-atgtaagtcattctaatattgcccatatgcatatagatatt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatat 64
||||| ||||||||||| | |||||||||||||||||||| | ||||||||||
Sbjct: 137 gtacttcctccgtttcata-atgtaagtcattctagcattgtctacattcatat 85
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||| |
Sbjct: 132 tactccctccgtttcaaat-tataagactttctagcattacccacattcatatatatgtt 74
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 73 aatgaatctaga 62
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
||||||||| |||||| | ||||||| | |||||||||| |||||||| ||| |||| |
Sbjct: 5 tactccctcagtttcata-atgtaagactttctagcattgcccacatttttatggatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 31 atgtaagtcattctagcatttcccacattcatat 64
||||||| | |||||||||| |||||||||||||
Sbjct: 112 atgtaagactttctagcattgcccacattcatat 79
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 56.0 bits (28), Expect = 1e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||| ||||| | || |||||||||||||||||| ||| ||| |||||||||||
Sbjct: 139 tactccctccatttcata-atataagtcattctagcattttccatatttatattgatgct 81
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacat 58
|||||||||||||||| | |||||||||||||||| |||| ||||||
Sbjct: 5 tactccctccgtttcata-atgtaagtcattctagtattttccacat 50
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||| ||||||||||||| ||||||| | || |||| || ||||||||||| | |||| |
Sbjct: 5 tacttcctccgtttcaca-atgtaagactttgtagcgttgcccacattcatttagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 66/79 (83%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| || |||| | || ||||| | ||||||| |||| |||| |
Sbjct: 154 tactccctccgtttcaca-atataagactttttagcactacccacatacataaagatgtt 96
Query: 72 aatgaatctagatagatat 90
|||||||||| ||| ||||
Sbjct: 95 aatgaatctaaatacatat 77
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctaga 83
||||||||| ||||||||||||| |||| |||||||||||||
Sbjct: 9 ttctagcatcacccacattcatatagatgttaatgaatctaga 51
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 41 ttctagcatttcccacattcatattgatgctaatgaatctag 82
|||||||||| ||||||||||||| |||| ||| ||||||||
Sbjct: 33 ttctagcattgcccacattcatatagatgttaacgaatctag 74
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgct 71
|||||||||||||||||| ||||||| |||||||||| ||||||| | || |||| |
Sbjct: 5 tactccctccgtttcaca-atgtaagattttctagcattgcccacatatacatagatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 50.1 bits (25), Expect = 7e-06
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttcccac 56
|||||||||||||||| | || |||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcata-atataagtcattctagcattttccac 48
Score = 50.1 bits (25), Expect = 7e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcacacatgtaagtcattctagcatttc 52
|||||||| ||||||| | ||||||||||||||||||||||
Sbjct: 146 tactcccttcgtttcata-atgtaagtcattctagcatttc 107
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 31 atgtaagtcattctagcatttcccacattcatattgatgctaatgaatctaga 83
||||||| | ||||||| || ||||||||||||| ||| |||||||||||||
Sbjct: 23 atgtaagactttctagccttgcccacattcatatatatgttaatgaatctaga 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccgtttcacacatgtaagtcattctagcatttcccacattcatattgatgc 70
|||||||||| |||||| | ||||||| | || ||||||| ||||||||||||| |||
Sbjct: 159 gtactccctcggtttcata-atgtaagactttttagcattgcccacattcatatagatat 101
Query: 71 taatgaatcta 81
||||||||||
Sbjct: 100 caatgaatcta 90
