miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 75/80 (93%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgtt 63
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||| |||||||||| |||||||||||| |
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccaca-ttcatattgatgtt 100
Query: 72 aatgaatctaga 83
||||||| ||||
Sbjct: 99 aatgaatgtaga 88
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggaggaagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtaa 4
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 6e-22
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||||||||| ||||||||| || |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgttgtt 63
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 63.9 bits (32), Expect = 5e-10
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
||||||||||| | ||||||||||| |||||||||||| |||||||||||||
Sbjct: 138 gtaagtcattccaccatttcccaca-ttcatattgatggtaatgaatctaga 88
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 6e-22
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgt 62
Query: 71 taatgaatctagatag 86
||||||||||||||||
Sbjct: 63 taatgaatctagatag 78
Score = 65.9 bits (33), Expect = 1e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||| ||| ||||||||| |
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccac-gtttatattgatgtt 98
Query: 72 aatgaatct 80
|||||||||
Sbjct: 97 aatgaatct 89
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 101 bits (51), Expect = 2e-21
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | ||||||||||||||||||||||||| |||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgc 62
Query: 71 taatgaatctagata 85
|||||||||||||||
Sbjct: 63 taatgaatctagata 77
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||||||||| ||| ||||||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctaca-ttcatattgatgct 94
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 93 aatgaatctaga 82
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 101 bits (51), Expect = 2e-21
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||| ||||||||||| |||||||||||| |
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccaca-ttcatattgatgtt 78
Query: 72 aatgaatctagatagatat 90
|||||||||||||||||||
Sbjct: 77 aatgaatctagatagatat 59
Score = 60.0 bits (30), Expect = 8e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
||||| |||||| ||||| | ||||||||||||||||||||||| | |||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccata-ttcatattgat 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaag 124
||||||||||||| |||||||| ||||| ||||||
Sbjct: 104 tagaatgacttacattgtgaaacggagggagtaag 138
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | ||||||||||||||||||||||||| |||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgacgt 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||| ||| |||||||||| || ||||||||| |
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccaca-ttaatattgatggt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||||| ||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 159 agtactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatg 101
Query: 70 ctaatgaatcta 81
|||||||||||
Sbjct: 100 ttaatgaatcta 89
Score = 85.7 bits (43), Expect = 1e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgtt 63
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 64 aatgaatctag 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||| |
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccaca-ttcatattgatatt 100
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 99 aatgaatctagatagatata 80
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | |||||||||| | |||||||||||| || |||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcatttttgcatttcccaca-tttatattgatgt 62
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 63 taatgaatctaga 75
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 95.6 bits (48), Expect = 1e-19
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgct 63
Query: 72 aatgaatc 79
||||||||
Sbjct: 64 aatgaatc 71
Score = 87.7 bits (44), Expect = 3e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccaca-ttcatattgatgct 80
Query: 72 aatgaatc 79
||||||||
Sbjct: 79 aatgaatc 72
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatatt 65
||||||||||| ||||| | |||||||||| |||||||| ||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccaca-ttcatatt 57
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 95.6 bits (48), Expect = 1e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgtt 91
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 90 aatgaatctaga 79
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 95.6 bits (48), Expect = 1e-19
Identities = 83/92 (90%), Gaps = 2/92 (2%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctagatagat-at 90
||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || |
Sbjct: 95 gtaagtcattctagcatttcccaca-ttcatattgatattaatgaatctagatatatgct 37
Query: 91 agaatgacttaccttgtgaaatggaggaagta 122
|||||||||||| |||||||| ||||| ||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcat 48
||||||||||| ||||| | |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgtt 100
Query: 72 aatgaatctagatagatata 91
|||||||||||||| |||||
Sbjct: 99 aatgaatctagataaatata 80
Score = 77.8 bits (39), Expect = 3e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| | ||||||||||||||||||| ||| | ||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccata-ttcatattgatgt 62
Query: 71 taatgaatcta 81
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 93.7 bits (47), Expect = 6e-19
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| | |||||||||||||||||||||||| |||||||| ||||
Sbjct: 133 gtactccctccgtttcacaatataagtcattctagcatttcccaca-ttcatattaatgc 75
Query: 71 taatgaatctagata 85
|||||||||||||||
Sbjct: 74 taatgaatctagata 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
|||| |||||| ||||| | ||||||||||||||||||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgat 60
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 93.7 bits (47), Expect = 6e-19
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| | |||||||||||||||||||||||| |||||||| ||||
Sbjct: 4 gtactccctccgtttcacaatataagtcattctagcatttcccaca-ttcatattaatgc 62
Query: 71 taatgaatctagata 85
|||||||||||||||
Sbjct: 63 taatgaatctagata 77
Score = 65.9 bits (33), Expect = 1e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
|||| |||||| ||||| | ||||||||||||||||||||||||| |||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgat 77
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 93.7 bits (47), Expect = 6e-19
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||||| ||||| | ||||||||||||||||||||||| | ||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttcccata-ttcatattgatg 61
Query: 70 ctaatgaatctagat 84
||||||||||||||
Sbjct: 62 ttaatgaatctagat 76
Score = 73.8 bits (37), Expect = 5e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctagat 84
||||||||||||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 120 gtaagtcattctagcatttcccata-ttcatattgatgttaatgaatctagat 69
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 91.7 bits (46), Expect = 2e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||||| ||||| | ||||||||||||||||||||||| | ||||||||||||
Sbjct: 141 agtactccctccgtttcacaatgtaagtcattctagcatttcccata-ttcatattgatg 83
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 82 ttaatgaatctaga 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttccca 54
|||||||||||||||||||||||
Sbjct: 25 gtaagtcattctagcatttccca 47
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 91.7 bits (46), Expect = 2e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||||| ||||| | ||||||||||||||||||||||| | ||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttcccata-ttcatattgatg 61
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 62 ttaatgaatctaga 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttccca 54
|||||||||||||||||||||||
Sbjct: 119 gtaagtcattctagcatttccca 97
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||| | | |||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctata-ttcatattgatgtt 63
Query: 72 aatgaatctagatagatataga 93
||||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatataga 85
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||| | || || |||||||||||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgca-ttcatattgatgtt 100
Query: 72 aatgaatctaga 83
||||||| ||||
Sbjct: 99 aatgaatataga 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| | |||||||||||||||||||||||| |||||||||||
Sbjct: 159 gtactccctccgtttcacaatataagtcattctagcatttcccaca-ttcatattgatat 101
Query: 71 taatgaatctagatagatata 91
||||||||||||||| |||||
Sbjct: 100 taatgaatctagatatatata 80
Score = 56.0 bits (28), Expect = 1e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||||| | ||| ||||| |||||||| ||| |
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccaca-ttcatattaatgtt 63
Query: 72 aatgaatctagatagatata 91
|||||||||||||| |||||
Sbjct: 64 aatgaatctagataaatata 83
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 89.7 bits (45), Expect = 9e-18
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgt 62
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 63 taatgaatctaga 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 89.7 bits (45), Expect = 9e-18
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 gtactacctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgt 62
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 63 taatgaatctaga 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 108 tagaatgacttacattgtgaaacggaggaagta 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcattt 50
||||| |||||| ||||| | |||||||||||||||||||
Sbjct: 141 gtacttcctccgtttcacaatgtaagtcattctagcattt 102
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||||| |||| ||||| | ||||||||||||| |||||| |||| ||||||||||||
Sbjct: 4 gtactccttccgtttcacaatgtaagtcattctaccatttctcaca-ttcatattgatgt 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||| | | | ||||| ||||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttcta-aattcatgttgatatt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 89.7 bits (45), Expect = 9e-18
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||| |||||||||| ||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccaca-ttcatattgatact 63
Query: 72 aatgaatctagatagatatag 92
|||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatatag 84
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | ||||||||||| | ||||||||||| |||||||||||||
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccaca-ttcatattgatgcc 97
Query: 72 aatgaatctaga 83
|||| |||||||
Sbjct: 96 aatggatctaga 85
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
|||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttatattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 89.7 bits (45), Expect = 9e-18
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| | ||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 157 gtactccctccgttccacaatgtaagtcattctagcatttcccaca-ttcatattgatgt 99
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 98 taatgaatctaga 86
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
||||||||||||||||||| | ||| |||||||||||| |||||||| ||||
Sbjct: 25 gtaagtcattctagcattttctaca-ttcatattgatgttaatgaatgtaga 75
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | ||||||||||||||||||| |||| ||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagcatttctcaca-ttcatattgatac 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccaca-ttcatattgatgct 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 89.7 bits (45), Expect = 9e-18
Identities = 70/77 (90%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 9 aagtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
|||||||||||||| ||||| | |||||||||||||||||||| |||| |||||||||||
Sbjct: 2 aagtactccctccgtttcacaatgtaagtcattctagcatttctcaca-ttcatattgat 60
Query: 69 gctaatgaatctagata 85
|||||||||||||||
Sbjct: 61 attaatgaatctagata 77
Score = 60.0 bits (30), Expect = 8e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||| |||||| ||||| | ||||||||||||||||||||||| | ||||||||||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccata-ttcatattgatg 86
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 110 tagaatgacttacattgtgaaacggaggaagta 142
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | ||||||||||||||||||| ||||| | ||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccaca-tccatattgatgt 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||| |||||||||| ||||||||| || |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccaca-ttcatattgttgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 70/77 (90%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| |||||||||||| |||||||||||||| || |||||||||
Sbjct: 159 gtacttcctccgtttcacaaagtaagtcattttagcatttcccaca-tttatattgatgt 101
Query: 71 taatgaatctagataga 87
|||||||||||||||||
Sbjct: 100 taatgaatctagataga 84
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| |||||||||||| | |||||||||||| || ||||||||| |
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccaca-tttatattgatgtt 63
Query: 72 aatgaatctaga 83
|||||||||||
Sbjct: 64 tatgaatctaga 75
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 87.7 bits (44), Expect = 3e-17
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 138 gtactccctccgtttcacaaagtaagtcattctagcatttcccaca-ttcatattgatgt 80
Query: 71 taat 74
||||
Sbjct: 79 taat 76
Score = 81.8 bits (41), Expect = 2e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatggt 63
Query: 72 aatgaatct 80
|||||||||
Sbjct: 64 aatgaatct 72
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||| ||||| |||||||||||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccaca-ttcatattgatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | ||| |||||||||||||| ||||| ||||||| |||||
Sbjct: 4 gtacttcctccgtttcacaatgtatgtcattctagcattgtccaca-ttcatatagatgc 62
Query: 71 taatgaatctag 82
||||||||||||
Sbjct: 63 taatgaatctag 74
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagtaa 159
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatagtgatgtt 104
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 103 aatgaatctaga 92
Score = 60.0 bits (30), Expect = 8e-09
Identities = 71/84 (84%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccaca---gttcatattga 67
||||| |||||| ||||| | |||||||||||||||||||| || | | |||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtga 63
Query: 68 tgctaatgaatctagatagatata 91
|| |||||||||||||||||||||
Sbjct: 64 tgttaatgaatctagatagatata 87
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||| ||||| |||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccaca-ttcatattgatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatagtgatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 79.8 bits (40), Expect = 8e-15
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccaca-ttcatattgatatt 100
Query: 72 aatgaatctagatagatata 91
|||||||||| |||||||||
Sbjct: 99 aatgaatctaaatagatata 80
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagtaa 159
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 85.7 bits (43), Expect = 1e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||| |||||||||||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccaca-ttcatattgatgct 63
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 64 aatgaatctag 74
Score = 65.9 bits (33), Expect = 1e-10
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcat-tctagcatttcccacagttcatattgatgc 70
||||||||||| ||||| | ||||||||| | |||||||||||||| |||||||||||||
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccaca-ttcatattgatgc 85
Query: 71 taatg 75
|||||
Sbjct: 84 taatg 80
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 93 aatgacttaccttgtgaaatggaggaagtaag 124
|||||||||| |||||||| ||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtaag 3
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 85.7 bits (43), Expect = 1e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||||| |||||||| |||| ||||| ||||| |||||||||||| |
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccaca-ttcatattgatgtt 72
Query: 72 aatgaatctagatagatat 90
|||||||||||||| ||||
Sbjct: 71 aatgaatctagatatatat 53
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 85.7 bits (43), Expect = 1e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||| |||||||||||||| ||||||||||||||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccaca-ttcatattgatgct 85
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 84 aatgaatctag 74
Score = 65.9 bits (33), Expect = 1e-10
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcat-tctagcatttcccacagttcatattgatgc 70
||||||||||| ||||| | ||||||||| | |||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccaca-ttcatattgatgc 63
Query: 71 taatg 75
|||||
Sbjct: 64 taatg 68
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 93 aatgacttaccttgtgaaatggaggaagtaag 124
|||||||||| |||||||| ||||||||||||
Sbjct: 114 aatgacttacattgtgaaacggaggaagtaag 145
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 85.7 bits (43), Expect = 1e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcatttcccaca-ttcatattgatgt 83
Query: 71 taatgaatcta 81
|||||||||||
Sbjct: 82 taatgaatcta 72
Score = 63.9 bits (32), Expect = 5e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | ||||||||||||||||||||||||| |||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattaatgt 62
Query: 71 taat 74
||||
Sbjct: 63 taat 66
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 83.8 bits (42), Expect = 5e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | ||||||||||||||||||||| ||| |||||||||||| |
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctaca-ttcatattgatgtt 65
Query: 72 aatgaatctagata 85
||||||||||||||
Sbjct: 64 aatgaatctagata 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcattt 50
|||| |||||| ||||| | |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||||| ||||| | ||||||||||||| ||||||||||| |||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctatcatttcccaca-ttcatattgata 61
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 62 ttaatgaatctaga 75
Score = 63.9 bits (32), Expect = 5e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||||||||||||| |||| ||||||| | |
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcaca-ttcatatattagtt 100
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 99 aatgaatctagatagatata 80
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggaggaagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 89 atagaatgacttaccttgtgaaatggaggaagta 122
|||||||||||||| |||||||| ||||| ||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 83.8 bits (42), Expect = 5e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||| ||||| |||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccaca-ttcatattgatgtt 63
Query: 72 aatgaatctagata 85
|||| |||||||||
Sbjct: 64 aatgtatctagata 77
Score = 67.9 bits (34), Expect = 3e-11
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatcta 81
||||||||||||||||||||||||| |||||||||||| ||||| |||||
Sbjct: 126 gtaagtcattctagcatttcccaca-ttcatattgatgttaatgtatcta 78
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 83.8 bits (42), Expect = 5e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||||||||| ||||||| |||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatatagatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccaca 56
||||||||||| ||||| | |||||||||||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccaca 80
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 83.8 bits (42), Expect = 5e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 34 aagtcattctagcatttcccacagttcatattgatgctaatgaatctagatagatata 91
||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 123 aagtcattctagcatttcccaca-ttcatattgatgttaatgtatctagatagatata 67
Score = 69.9 bits (35), Expect = 8e-12
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 34 aagtcattctagcatttcccacagttcatattgatgctaatgaatctagat 84
||||||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 1 aagtcattctagcatttcccaca-ttcatattgatgttaatgtatctagat 50
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 83.8 bits (42), Expect = 5e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 34 aagtcattctagcatttcccacagttcatattgatgctaatgaatctagatagatata 91
|||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcaca-ttcatattgatgttaatgaatctagatagatata 57
Score = 75.8 bits (38), Expect = 1e-13
Identities = 48/50 (96%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 34 aagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 110 aagtcattctagcatttcccaca-ttcatattgatgttaatgaatctaga 62
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||||| ||||| | ||||||||||||| ||||||||||| |||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctaacatttcccaca-ttcatattgata 61
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 62 ttaatgaatctaga 75
Score = 79.8 bits (40), Expect = 8e-15
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||| |||| |||| ||||||||||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcaca-ttcatattgatttt 100
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 99 aatgaatctagatagatata 80
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagtaa 159
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 83.8 bits (42), Expect = 5e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||| | ||||| | ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgtt 72
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 71 aatgaatcta 62
Score = 44.1 bits (22), Expect = 5e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 33 taagtcattctagcatttcccacagttcatattgatgctaat 74
||||||||| |||||||| ||||| |||||||||||| ||||
Sbjct: 22 taagtcattatagcattttccaca-ttcatattgatgttaat 62
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||||||||| ||||||| |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatatagatgtt 100
Query: 72 aatgaatctagatagatataga 93
||||||||| ||| |||||||
Sbjct: 99 gatgaatctaaatatatataga 78
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| |||||||||| || |||||| |||| ||||||| ||||
Sbjct: 4 gtactccctccgtttcacattgtaagtcattttatcatttctcaca-ttcatatagatgt 62
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 63 taatgaatctaga 75
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 83.8 bits (42), Expect = 5e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||| ||||||||||| |||||||||||| |
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccaca-ttcatattgatgtt 77
Query: 72 aatgaatctagata 85
||||||||||||||
Sbjct: 76 aatgaatctagata 63
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||| |||||| ||||| | |||||||||||||||||| ||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccaca-ttcatattgatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
|||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttatattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 83.8 bits (42), Expect = 5e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 34 aagtcattctagcatttcccacagttcatattgatgctaatgaatctagatagatata 91
||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||
Sbjct: 110 aagtcattctagcatttcccaca-ttcatattgatgttaatgaatctaaatagatata 54
Score = 75.8 bits (38), Expect = 1e-13
Identities = 48/50 (96%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 34 aagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 1 aagtcattctagcatttcccaca-ttcatattgatgttaatgaatctaga 49
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 81.8 bits (41), Expect = 2e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||| |||||||||||| |||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcaca-ttcatattgatgct 63
Query: 72 aatgaatctagat 84
|||||||||||||
Sbjct: 64 aatgaatctagat 76
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||| ||||| |||||||| | ||| || |||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacattt-atattgatgct 88
Query: 72 aatgaatctagat 84
||||||| |||||
Sbjct: 87 aatgaatttagat 75
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 81.8 bits (41), Expect = 2e-15
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| | |||||| |||||||||||| ||||| || |||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaatt-atattgatgt 62
Query: 71 taatgaatctagatagatata 91
||||||||||| |||||||||
Sbjct: 63 taatgaatctatatagatata 83
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 81.8 bits (41), Expect = 2e-15
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccaca-ttcatattgatgtc 94
Query: 72 aatgaatctagatagat 88
|||||||||||| ||||
Sbjct: 93 aatgaatctagacagat 77
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||| ||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccaca-ttcatattgatgtc 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 89 atagaatgacttaccttgtgaaatggaggaagta 122
|||||||||||||| |||||||| ||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 81.8 bits (41), Expect = 2e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||| ||| ||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 150 agtactccccccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatg 92
Query: 70 ctaatgaat 78
||||||||
Sbjct: 91 ttaatgaat 83
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| || ||||| ||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-tttatattaatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 81.8 bits (41), Expect = 2e-15
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 9 aagtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
|||||||||||||| ||||| | ||||||||||||||||||| | | | |||||||||||
Sbjct: 2 aagtactccctccgtttcacaatgtaagtcattctagcattttctata-ttcatattgat 60
Query: 69 gctaatgaatctagata 85
| |||||||||||||||
Sbjct: 61 gttaatgaatctagata 77
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | |||||||||| |||||||||||||| |||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccaca-ttcatattagtgt 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||||||| ||||| |||||||| ||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccaca-ttcatattaatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 81.8 bits (41), Expect = 2e-15
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||||| |||||| ||||| | ||||||||||||||||||| |||| ||||||||||||
Sbjct: 129 agtacttcctccgtttcacaatataagtcattctagcatttctcaca-ttcatattgatg 71
Query: 70 ctaatgaatctagatag 86
||||||||||||||||
Sbjct: 70 ttaatgaatctagatag 54
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 9 aagtactccctccggttcaccaagtaagtcattctagcatttc 51
||||||| |||||| ||||| | ||||||||||||||||||||
Sbjct: 2 aagtacttcctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||| ||| | |||||||||||| |
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccata-ttcatattgatgtt 87
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 86 aatgaatctaga 75
Score = 54.0 bits (27), Expect = 5e-07
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctag 82
|||||||||||||||||||| |||| || ||||||||| |||| |||||||
Sbjct: 25 gtaagtcattctagcatttctcaca-tttatattgatgttaataaatctag 74
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 113 tagaatgacttacattgtgaaacggagggagtaa 146
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 79.8 bits (40), Expect = 8e-15
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgtt 63
Query: 72 aatgaatc 79
||||||||
Sbjct: 64 aatgaatc 71
Score = 73.8 bits (37), Expect = 5e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| | |||| ||||||||||||||| |||| ||||||||||||
Sbjct: 142 gtactccctccgtttcacaatgtaattcattctagcatttctcaca-ttcatattgatgt 84
Query: 71 taatgaatc 79
|||||||||
Sbjct: 83 taatgaatc 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||| ||||||||||| | |||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccata-ttcatattgatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 67.9 bits (34), Expect = 3e-11
Identities = 69/80 (86%), Gaps = 3/80 (3%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||||||||| || || ||||||||| |
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttcaca---tttatattgatgtt 100
Query: 72 aatgaatctagatagatata 91
||| |||||| |||||||||
Sbjct: 99 aataaatctatatagatata 80
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||| ||||||||| |||| | ||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcaca-tccatattgatgct 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| |||||| | || |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatacttatatt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||| | ||||| | ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgtt 88
Query: 72 aatgaatctaga 83
|||||| |||||
Sbjct: 87 aatgaaactaga 76
Score = 67.9 bits (34), Expect = 3e-11
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatcta 81
||||||||||||||||||| ||||| |||||||||||| |||||||||||
Sbjct: 25 gtaagtcattctagcattttccaca-ttcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgtc 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 67.9 bits (34), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccaca-ttcatattgatg 79
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 79.8 bits (40), Expect = 8e-15
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccac-gttcatattgatgct 63
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacag 57
||||||||||| || || | |||| |||||||||||||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccacag 62
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||| ||||| ||| |||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccaca-ttcgtattgatgtt 63
Query: 72 aatgaatctagatagatata 91
||||| ||||||||||||||
Sbjct: 64 aatgactctagatagatata 83
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||||||| | | | ||||||||||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctata-ttcatattgatgct 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | |||||||||||||| |||||||| | ||||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccata-ttcatattgatgct 78
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 77 aatgaatctaga 66
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||||||||| || |||||| || |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccaca-tttatattggtgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 65.9 bits (33), Expect = 1e-10
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| | ||| | |||||||||||||||||| |||| |||||||||||
Sbjct: 159 gtactccctccgttccacaatataagtcattctagcatttttcaca-ttcatattgatat 101
Query: 71 taatgaatctagatagatata 91
||||||||||| |||||||||
Sbjct: 100 taatgaatctaaatagatata 80
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||||||||| |||| |||||||| ||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcaca-ttcatattaatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 65.9 bits (33), Expect = 1e-10
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | |||||||||||||||||| |||| | ||||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattacccata-ttcatatggatgt 62
Query: 71 taatgaatctagatagatata 91
|||||||||||| | ||||||
Sbjct: 63 taatgaatctagttggatata 83
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagtaa 159
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 79.8 bits (40), Expect = 8e-15
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctagataga 87
|||||||||||||||||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 25 gtaagtcattctagcatttctcaca-ttcatattgatggtaatgaatctagataga 79
Score = 69.9 bits (35), Expect = 8e-12
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||| ||||||||| | || ||||| ||| |
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccata-tttatattaatgtt 99
Query: 72 aatgaatctagatagatat 90
|||||||||||||| ||||
Sbjct: 98 aatgaatctagatatatat 80
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||| ||||||||||| | |||||||||||| |
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccata-ttcatattgatgtt 98
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 97 aatgaatctaga 86
Score = 67.9 bits (34), Expect = 3e-11
Identities = 69/80 (86%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||||||||| || || ||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcaca---tttatattgatgtt 61
Query: 72 aatgaatctagatagatata 91
||| |||||| |||||||||
Sbjct: 62 aataaatctatatagatata 81
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||| |||||||||||||| |||||||| ||| |
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccaca-ttcatatttatgtt 63
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||| ||||||||||||| |||| || ||||||||| |
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacattt-atattgatgat 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||| ||||||| |||||| |||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccaca-ttcatattgatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 79.8 bits (40), Expect = 8e-15
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||| |||||||||||||| |||||||| ||| |
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccaca-ttcatattaatgtt 100
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 99 aatgaatctagatagatata 80
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 77.8 bits (39), Expect = 3e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| | |||||||||||||||||| ||||| ||||||||||||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcattttccaca-ttcatattgatgt 83
Query: 71 taatgaatcta 81
|||||||||||
Sbjct: 82 taatgaatcta 72
Score = 63.9 bits (32), Expect = 5e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | ||||||||||||||||||||||||| |||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattaatgt 62
Query: 71 taat 74
||||
Sbjct: 63 taat 66
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccaca-ttcatatagatgct 100
Query: 72 aatgaat 78
|||||||
Sbjct: 99 aatgaat 93
Score = 60.0 bits (30), Expect = 8e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||| ||||| | | | ||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctata-ttcatatagatgct 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 77.8 bits (39), Expect = 3e-14
Identities = 49/51 (96%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 33 taagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 104 taagtcattctagcatttctcaca-ttcatattgatgctaatgaatctaga 55
Score = 69.9 bits (35), Expect = 8e-12
Identities = 45/47 (95%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaat 78
|||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 4 gtaagtcattctagcatttctcaca-ttcatattgatgctaatgaat 49
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 77.8 bits (39), Expect = 3e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcac-gttcatattgatgct 73
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 72 aatgaatctag 62
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 89 atagaatgacttaccttgtgaaatggaggaagta 122
|||||||||||||| |||||||| ||||| ||||
Sbjct: 98 atagaatgacttacattgtgaaacggagggagta 131
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 75.8 bits (38), Expect = 1e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||| ||||| ||||||| |||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccaca-ttcatatcgatgtt 63
Query: 72 aatgaatctagatagata 89
||||| | ||||||||||
Sbjct: 64 aatgagtttagatagata 81
Score = 54.0 bits (27), Expect = 5e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||| |||||| ||||| | ||||||||||||||||||| ||| | ||||||||||||
Sbjct: 153 gtacttcctccgtttcacaatgtaagtcattctagcattttccata-ttcatattgatg 96
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 120 tagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 75.8 bits (38), Expect = 1e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 19 tccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgctaatgaat 78
|||| ||||| | |||||||||||||||||||| |||| |||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcaca-ttcatattgatgttaatgaat 70
Query: 79 ctagat 84
||||||
Sbjct: 71 ctagat 76
Score = 60.0 bits (30), Expect = 8e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||| ||| | || |||||||| |
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccata-tttatattgatatt 88
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 87 aatgaatcta 78
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 75.8 bits (38), Expect = 1e-13
Identities = 51/54 (94%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 33 taagtcattctagcatttcccacagttcatattgatgctaatgaatctagatag 86
|||||||||||||||||| ||||| |||||| ||||||||||||||||||||||
Sbjct: 26 taagtcattctagcattttccaca-ttcatactgatgctaatgaatctagatag 78
Score = 60.0 bits (30), Expect = 8e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||| |||| | |||||||||| |||||||||||||| ||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccaca-ttcatattgatg 82
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 75.8 bits (38), Expect = 1e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 19 tccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgctaatgaat 78
|||| ||||| | |||||||||||||||||||| |||| |||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcaca-ttcatattgatgttaatgaat 70
Query: 79 ctagat 84
||||||
Sbjct: 71 ctagat 76
Score = 52.0 bits (26), Expect = 2e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||| |||||||| ||| | || |||||||| |
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccata-tttatattgatatt 88
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 87 aatgaatcta 78
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 75.8 bits (38), Expect = 1e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||| ||||| || ||||||||| |
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaatt-atattgatgtt 81
Query: 72 aatgaatctagatagata 89
||| |||||| |||||||
Sbjct: 80 aataaatctatatagata 63
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 93 aatgacttaccttgtgaaatggaggaagta 122
|||||||||| |||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 75.8 bits (38), Expect = 1e-13
Identities = 45/46 (97%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 34 aagtcattctagcatttcccacagttcatattgatgctaatgaatc 79
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccaca-ttcatattgatgctaatgaatc 45
Score = 69.9 bits (35), Expect = 8e-12
Identities = 42/43 (97%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 37 tcattctagcatttcccacagttcatattgatgctaatgaatc 79
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 87 tcattctagcatttcccaca-ttcatattgatgctaatgaatc 46
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 75.8 bits (38), Expect = 1e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||| ||||| ||||| | ||||||||||||| ||||||||||| |||||||||||| |
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccaca-ttcatattgatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/75 (82%), Gaps = 8/75 (10%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||| ||||| ||||| | ||||||||||||||||||| |||||||||||
Sbjct: 144 gtactctctccgtttcacaatgtaagtcattctagcattt--------tcatattgatgt 93
Query: 71 taatgaatctagata 85
|||||||||||||||
Sbjct: 92 taatgaatctagata 78
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 75.8 bits (38), Expect = 1e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||| ||| ||||| |||||||||||| |
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccaca-ttcatattgatgtt 94
Query: 72 aatgaatctagatagata 89
||||| | ||||||||||
Sbjct: 93 aatgagtttagatagata 76
Score = 65.9 bits (33), Expect = 1e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 9 aagtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
||||||| |||||| ||||| | ||||||||||||||||||| ||||| |||||||||||
Sbjct: 2 aagtacttcctccgtttcacaatgtaagtcattctagcattttccaca-ttcatattgat 60
Query: 69 g 69
|
Sbjct: 61 g 61
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 75.8 bits (38), Expect = 1e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||| |||||||||||||| |||||||||||| |
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccaca-ttcatattgatgtt 76
Query: 72 aatgaatctagata 85
|||||||| |||||
Sbjct: 75 aatgaatcaagata 62
Score = 48.1 bits (24), Expect = 3e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||||||| |||| ||||| | |||||||||| | |||||| ||||| ||||||||||||
Sbjct: 3 agtactccatccgtttcacaatgtaagtcattttggcattttccaca-ttcatattgatg 61
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 5e-13
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| | ||||||||||||||||||| |||| |||||| | |||
Sbjct: 157 gtactccctccgtttcacaatgtaagtcattctagcatttttcaca-ttcatactcatgt 99
Query: 71 taatgaatctagatagatata 91
||||||||||||||| |||||
Sbjct: 98 taatgaatctagatatatata 78
Score = 48.1 bits (24), Expect = 3e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||| |||||||||||| |||||| | ||| |
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccaca-ttcatactcatgtt 63
Query: 72 aatgaatctaga 83
||||||| ||||
Sbjct: 64 aatgaatttaga 75
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 73.8 bits (37), Expect = 5e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||| | ||||| | |||||||||||||||||||| |||| ||||||||||||||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcaca-ttcatattgatgct 63
Query: 72 aatga 76
|||||
Sbjct: 64 aatga 68
Score = 73.8 bits (37), Expect = 5e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||| |||| ||||||||||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcaca-ttcatattgatgct 77
Query: 72 aatgaatct 80
|||||||||
Sbjct: 76 aatgaatct 68
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
|||||||||||| |||||||| |||||||||||
Sbjct: 103 tagaatgacttatattgtgaaacggaggaagtaa 136
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 73.8 bits (37), Expect = 5e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | |||||||||| || ||||||||||| |||||||||||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccaca-ttcatattgatgtt 63
Query: 72 aatgaatctagat 84
|||||||||||||
Sbjct: 64 aatgaatctagat 76
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 33 taagtcattctagcatttcccacagttcatattgatgctaatgaatctagat 84
|||||||||||||||||| | | | |||||||||||| ||||||||||||||
Sbjct: 125 taagtcattctagcatttactata-ttcatattgatgttaatgaatctagat 75
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 73.8 bits (37), Expect = 5e-13
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||||||||| || | || ||||||||| |
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcata-tttatattgatgtt 87
Query: 72 aatgaatctagatagat 88
||| |||||||||||||
Sbjct: 86 aataaatctagatagat 70
Score = 61.9 bits (31), Expect = 2e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||| |||||| ||||| | |||||||||| |||||||||||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccaca-ttcatattgatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 113 tagaatgacttacattgtgaaacggagggagtaa 146
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 5e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 tccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgctaat 74
|||||||| ||||| | |||||||||||||||||||| |||| |||||||||||| |||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcaca-ttcatattgatgtcaat 97
Query: 75 gaatctaga 83
|||||||||
Sbjct: 96 gaatctaga 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 15 tccctccggttcaccaagtaagtcattctagcatttcccacagttcatattga 67
|||||||| ||||| | ||||||||||||||||| || |||| ||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcaca-ttcatattga 59
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa
Japonica Group
Length = 148
Score = 73.8 bits (37), Expect = 5e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||||| ||||| | ||||| ||||||||||||||||||| ||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagccattctagcatttcccaca-ttcatattgatg 61
Query: 70 ctaatgaat 78
| ||||||
Sbjct: 62 ttcatgaat 70
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattgatgtt 86
Query: 72 aatgaatctaga 83
|| ||||||||
Sbjct: 85 cataaatctaga 74
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 112 tagaatgacttacattgtgaaacggaggaagta 144
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 73.8 bits (37), Expect = 5e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | |||||||||| || ||||||||||| |||||||||||| |
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccaca-ttcatattgatgtt 88
Query: 72 aatgaatctagat 84
|||||||||||||
Sbjct: 87 aatgaatctagat 75
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 33 taagtcattctagcatttcccacagttcatattgatgctaatgaatctagat 84
|||||||||||||||||| | | | |||||||||||| ||||||||||||||
Sbjct: 26 taagtcattctagcatttactata-ttcatattgatgttaatgaatctagat 76
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 73.8 bits (37), Expect = 5e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||| |||||||||||||| | ||| ||||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctaca-ttcatattgatgct 88
Query: 72 aatgaatctagat 84
||||||| |||||
Sbjct: 87 aatgaatttagat 75
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||| |||| || | || |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatattt-atattgatgct 63
Query: 72 aatgaatctagat 84
|||||||||||||
Sbjct: 64 aatgaatctagat 76
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 73.8 bits (37), Expect = 5e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 8 gaagtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattga 67
||||||||||||||| ||||| | |||||||||| |||||||| ||||| ||||||||||
Sbjct: 1 gaagtactccctccgtttcacaatgtaagtcattttagcattttccaca-ttcatattga 59
Query: 68 tgctaatga 76
|| ||||||
Sbjct: 60 tgttaatga 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||||||||||| ||||| | |||| | ||| |||||||| ||||| ||||||||||||
Sbjct: 129 gtactccctccgtttcacaatgtaatttattttagcattttccaca-ttcatattgatg 72
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 73.8 bits (37), Expect = 5e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| |||| | |||||||||||||||||||| || | ||||||||||||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcatttctcata-ttcatattgatgt 62
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 63 taatgaatctaga 75
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccaca 56
|||||| |||||| || || | |||||||||||||||||||||||||
Sbjct: 147 agtacttcctccgttttacaatgtaagtcattctagcatttcccaca 101
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 73.8 bits (37), Expect = 5e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| ||||| | |||||||||| ||| ||||| |||| ||||||||||||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcaca-ttcatattgatgt 90
Query: 71 taatgaatctaga 83
|||||||||||||
Sbjct: 89 taatgaatctaga 77
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 71.9 bits (36), Expect = 2e-12
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
||||||||||||||||||||||||| |||||||||||| ||||| |||||||
Sbjct: 109 gtaagtcattctagcatttcccaca-ttcatattgatgttaatggatctaga 59
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 71/80 (88%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcat-tctagcatttcccacagttcatattgatgc 70
||||||||||| ||||| | ||||||| |||| ||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccaca-ttcatattgatgt 63
Query: 71 taatgaatctagatagatat 90
||||||||||||||||||||
Sbjct: 64 taatgaatctagatagatat 83
Score = 58.0 bits (29), Expect = 3e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
|||| |||||| ||||| | ||||||||||||||||||||||| | |||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccata-ttcatattgat 82
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 105 tagaatgacttacattgtgaaacggaggaagtaa 138
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||| |||||||| |||||||||| ||||||||||| |
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccaca-ttcatattgatatt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 56.0 bits (28), Expect = 1e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||| |||| | || ||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcactagaa-atattgatgtt 63
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatata 83
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||| |||||||| ||| || |||||||||| |
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcac-gtacatattgatgtt 72
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 71 aatgaatctagatagatata 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 93 aatgacttaccttgtgaaatggaggaagtaa 123
|||||||||| |||||||| |||||||||||
Sbjct: 101 aatgacttacattgtgaaacggaggaagtaa 131
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccaca 56
|||||||||||| || || | |||||||||| ||| ||||||||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattttagtatttcccaca 49
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 8 gaagtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattga 67
||||||||||||||| |||| | |||||||||||||||||| || ||| ||||||| ||
Sbjct: 1 gaagtactccctccgtttcataatgtaagtcattctagcattaccaaca-ttcatataga 59
Query: 68 tgctaatgaatctaga 83
|| |||||||||||||
Sbjct: 60 tgttaatgaatctaga 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaag 124
||||||||||||| || ||||| ||||||||||||
Sbjct: 126 tagaatgacttacattatgaaacggaggaagtaag 160
Score = 44.1 bits (22), Expect = 5e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctagata 85
|||||||||||||||||| |||||| | |||| |||| |||||||| ||||||
Sbjct: 138 gtaagtcattctagcattgcccaca-tatatatagatgttaatgaatttagata 86
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | ||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccaca-ttcatatcgatgcc 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 60 catattgatgctaatgaatctagatagatata 91
||||||||||||||||||||||||||||||||
Sbjct: 111 catattgatgctaatgaatctagatagatata 80
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||| |||| ||||| |||||||||||| |
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccaca-ttcatattgatgtt 99
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 98 aatgaatctaga 87
Score = 63.9 bits (32), Expect = 5e-10
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| || || | |||||| ||||||| ||||||||| ||||||||||| |
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccaca-ttcatattgatatt 62
Query: 72 aatgaatctagatagatata 91
||||||||||||||||||||
Sbjct: 63 aatgaatctagatagatata 82
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||| |||||||| ||||| || |||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacattt-atattgatgct 94
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 93 aatgaatctaga 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | |||||||||| ||||||||| |||| || | ||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttctcacattt-acattgatgc 62
Query: 71 taatgaatctagata 85
|||||||| ||||||
Sbjct: 63 taatgaatttagata 77
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||| ||||| ||||||| | || |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccaca-ttcatataggtgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 67.9 bits (34), Expect = 3e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctagatagatata 91
||||||||||||| ||||||||||| ||||||| | || ||||||||||||||| |||||
Sbjct: 25 gtaagtcattctaacatttcccaca-ttcatataggtgttaatgaatctagatatatata 83
Query: 92 ga 93
||
Sbjct: 84 ga 85
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagtaa 159
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| |||||||| | ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatattagtact 72
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 71 aatgaatctaga 60
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 98 tagaatgacttacattgtgaaacggaggaagta 130
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccaca 56
||||| |||||| ||||| | |||||| ||||||||||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagcatttctcaca 49
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | ||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccaca-ttcatatcgatgcc 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 63.9 bits (32), Expect = 5e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | |||||||||||||| |||| |||| | ||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcaca-tccatatcgatgct 100
Query: 72 aatgaatctagatagatata 91
|||||||||||||| |||||
Sbjct: 99 aatgaatctagataaatata 80
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||| |||||||||||| | |||||||||||| |
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccata-ttcatattgatgtt 91
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 90 aatgaatctaga 79
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 63 attgatgctaatgaatctagatagatata 91
||||||| |||||||||||||||||||||
Sbjct: 48 attgatgttaatgaatctagatagatata 76
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| | ||| | |||||||||| |||||||||||| | || |||||||||||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccata-tttatattgatgct 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 60.0 bits (30), Expect = 8e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||| |||||| ||||| | ||||| ||||||||||||||||||| ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccaca-ttcatattgatg 76
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| |||||||| || |
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatatttatatt 77
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 76 aatgaatctaga 65
Score = 60.0 bits (30), Expect = 8e-09
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatatt 65
|||||||||| ||||| | ||||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccaca-ttcatatt 57
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaatggagggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 103 tagaatgacttacattgtgaaacggaggaagta 135
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 8e-12
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 33 taagtcattctagcatttcccacagttcatattgatgctaatgaatctagatagatata 91
||||||||||||| |||| ||| | ||||||||||||||||||||| ||||||||||||
Sbjct: 26 taagtcattctagtattttccata-ttcatattgatgctaatgaatttagatagatata 83
Score = 60.0 bits (30), Expect = 8e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| | ||| | |||||||||||| |||||| || | ||||||||||||||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcata-ttcatattgatgct 100
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 69.9 bits (35), Expect = 8e-12
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||| ||| |||||||||||| |
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctaca-ttcatattgatgtt 56
Query: 72 aatgaat 78
|||||||
Sbjct: 55 aatgaat 49
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccaca 56
|||||||||||| ||||| | |||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccaca 49
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 82 tagaatgacttacattgtgaaacggaggaagta 114
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 69.9 bits (35), Expect = 8e-12
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||||||||| || |||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccaca-tttatattgatatt 63
Query: 72 aatgaatctagatagatat 90
||| ||| |||||| ||||
Sbjct: 64 aataaatttagataaatat 82
Score = 58.0 bits (29), Expect = 3e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
|||| |||||| ||||| | |||||||||||||||||||||||| |||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccaca-ttcatattgat 81
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtaa 4
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 69.9 bits (35), Expect = 8e-12
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||| ||| || ||||||||| |
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcac-gtatatattgatgtt 72
Query: 72 aatgaatctagatagatat 90
|||||||||||||||||||
Sbjct: 71 aatgaatctagatagatat 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||||||||||
Sbjct: 98 tagaatgacttacattgtgaaacggaggaagtaa 131
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccaca 56
|||||||||||| || || | |||||||||||||| ||||| ||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattctagtatttctcaca 49
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 69.9 bits (35), Expect = 8e-12
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||||||||||| ||||| | ||||||||||||||||||||||||| ||||||| ||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatatcgatg 61
Score = 65.9 bits (33), Expect = 1e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||||||| ||||||| |||| |
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca-ttcatatcgatgtt 72
Query: 72 aatga 76
|||||
Sbjct: 71 aatga 67
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 98 tagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccaca 56
|||||||||||| ||||| | |||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccaca 49
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatt 49
||||||||||| ||||| | |||| |||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 67.9 bits (34), Expect = 3e-11
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatcta 81
||||||||||||||||||| ||||| |||||||||||| |||||||||||
Sbjct: 25 gtaagtcattctagcattttccaca-ttcatattgatgttaatgaatcta 73
Score = 67.9 bits (34), Expect = 3e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||| | ||||| | |||||||||||||||||||| |||| |||||||||||| |
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcaca-ttcatattgatgtt 91
Query: 72 aatgaa 77
||||||
Sbjct: 90 aatgaa 85
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccac 55
||||||||||||| ||||| | ||||||||||||||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttcccac 48
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatat 64
|||||||||||| ||||| | |||||||||||||||||||||||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccac-gttcatat 56
Score = 61.9 bits (31), Expect = 2e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||||| ||| ||||||||||| |
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaaca-ttcatattgatatt 68
Query: 72 aatgaat 78
|||||||
Sbjct: 67 aatgaat 61
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 94 tagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 67.9 bits (34), Expect = 3e-11
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 42 ctagcatttcccacagttcatattgatgctaatgaatctagatagatata 91
|||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 1 ctagcatttcccac-gttcatattgatattaatgaatctagatagatata 49
Score = 54.0 bits (27), Expect = 5e-07
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 42 ctagcatttcccacagttcatattgatgctaatgaatctagat 84
|||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 91 ctagcatttcccac-gttcatattgatattaatgaatctagat 50
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||| ||||| | ||||||||||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccaca-ttcatattgatg 61
Score = 67.9 bits (34), Expect = 3e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||||||||| ||||||| |||||||||||| |
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccaca-ttcatattgatgtt 74
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 73 aatgaatcta 64
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 67.9 bits (34), Expect = 3e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 9 aagtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
||||||| |||||| ||||| | |||||||||||||||||||| |||| ||||||||| |
Sbjct: 2 aagtacttcctccgtttcacaatgtaagtcattctagcatttctcaca-ttcatattgct 60
Query: 69 gctaatgaat 78
| ||||||||
Sbjct: 61 gttaatgaat 70
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcattt 50
||||||||||| ||||| | |||||||||||||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattt 92
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 67.9 bits (34), Expect = 3e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | | ||||||||||||||||||||||| |||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccaca-ttcatattgatgtt 63
Query: 72 aatgaa 77
||||||
Sbjct: 64 aatgaa 69
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 65.9 bits (33), Expect = 1e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 tccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgctaat 74
|||||||| ||||| | |||||||||||||||||||| |||| |||||||| ||| |||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcaca-ttcatatttatgtcaat 77
Query: 75 gaatctaga 83
|||||||||
Sbjct: 76 gaatctaga 68
Score = 61.9 bits (31), Expect = 2e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 15 tccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||||||| ||||| | |||||||||||||||||||| |||| ||||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcaca-ttcatattgatg 61
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 65.9 bits (33), Expect = 1e-10
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||| | |||| | |||||||||||||| |||||||||| |||||| |||||
Sbjct: 145 gtactccctctgtttcataatgtaagtcattctagtatttcccaca-ttcatagtgatgt 87
Query: 71 taatgaatctagatagatata 91
|||| |||||||||| |||||
Sbjct: 86 taataaatctagatatatata 66
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| || ||||| |||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggaggaagtaa 4
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 1e-10
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||| |||||| ||||| | ||||||||||||| ||||| || | || |||||||||
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagtatttctcatattt-atattgatga 62
Query: 71 taatgaatctagatagatata 91
|||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatata 83
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 65.9 bits (33), Expect = 1e-10
Identities = 43/45 (95%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 34 aagtcattctagcatttcccacagttcatattgatgctaatgaat 78
|||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 92 aagtcattttagcatttcccaca-ttcatattgatgctaatgaat 49
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccaca 56
||||||||||||| ||||| | |||| ||||||||||||||| ||||
Sbjct: 3 agtactccctccgtttcacaatgtaactcattctagcatttctcaca 49
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccaca 56
||||||||||| ||||| | |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccaca 49
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccaca 56
||||||||||| ||||| | |||||||||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccaca 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccaca 56
|||||||||||||||||||||||||
Sbjct: 86 gtaagtcattctagcatttcccaca 62
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 65.9 bits (33), Expect = 1e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
||||||||||| ||||| | |||||||||||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccaca-ttcatattgat 60
Score = 54.0 bits (27), Expect = 5e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 33 taagtcattctagcatttcccacagttcatattga 67
|||||||||||||||||||||||| ||||||||||
Sbjct: 94 taagtcattctagcatttcccaca-ttcatattga 61
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||| ||||||||| || | || |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatattt-atattgatgct 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 58.0 bits (29), Expect = 3e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccaca-ttcatattgatgct 81
Query: 72 a 72
|
Sbjct: 80 a 80
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | |||||||||||||||||| |||| | ||||||| |||| |
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccata-ttcatatagatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctagata 85
|||||||||||||||||| |||||| | ||||| |||| |||||||| ||||||
Sbjct: 25 gtaagtcattctagcattgcccaca-tacatatagatgttaatgaatttagata 77
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||||| |||| | |||||||||| ||||||| |||||| ||||||| ||||
Sbjct: 160 agtactccctccgtttcataatgtaagtcattttagcattgcccaca-ttcatatagatg 102
Query: 70 ctaatgaatcta 81
|||||||||||
Sbjct: 101 gtaatgaatcta 90
Score = 44.1 bits (22), Expect = 5e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctagata 85
||||||||||||||| || |||| | | ||||| |||| |||||||||||||||
Sbjct: 25 gtaagtcattctagccttacccata-tgcatatagatgttaatgaatctagata 77
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||| | ||||| |||| |||||| ||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccaca-ttcatatagatgct 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 63.9 bits (32), Expect = 5e-10
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
|||||||||||||| ||||| |||| |||||||||||| |||||||||||||
Sbjct: 25 gtaagtcattctagtatttctcaca-ttcatattgatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 5e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatatt 65
|||||||||||||||||||| |||| ||||||||
Sbjct: 110 gtaagtcattctagcatttctcaca-ttcatatt 78
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 63.9 bits (32), Expect = 5e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 aagtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
||||||| |||||| ||||| | ||||||| ||||||||||| ||| | |||||||| ||
Sbjct: 137 aagtacttcctccgtttcacaatgtaagtccttctagcattttccata-ttcatattaat 79
Query: 69 gctaatgaatctagat 84
| ||||||||||||||
Sbjct: 78 gttaatgaatctagat 63
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||| ||||| ||| | |||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccata-ttcatattgatgtt 63
Query: 72 aatgaatctagatag 86
||||||| |||||||
Sbjct: 64 aatgaatgtagatag 78
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 13 actccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgcta 72
|||||||||| |||| | ||||||||||||||||||||||||| ||||||| || | ||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccaca-ttcatatggaggtta 99
Query: 73 atgaatctaga 83
||||||||||
Sbjct: 98 gtgaatctaga 88
Score = 56.0 bits (28), Expect = 1e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | ||||||||||||||||||||| | | ||||||| || | |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctata-ttcatatagaggtt 63
Query: 72 aatgaatctagatagatata 91
| |||||||| |||||||||
Sbjct: 64 agtgaatctatatagatata 83
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||||||||| ||||| || |||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccaca-tttatattgatatt 63
Query: 72 aatgaatctagatagatat 90
||| ||| |||||| ||||
Sbjct: 64 aataaatttagataaatat 82
Score = 58.0 bits (29), Expect = 3e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
|||| |||||| ||||| | |||||||||||||||||||||||| |||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccaca-ttcatattgat 81
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| ||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtaa 4
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||| ||| | |||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccata-ttcatattgatgtt 63
Query: 72 aatgaat 78
|||||||
Sbjct: 64 aatgaat 70
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||||||||||| ||| | ||||||||||||
Sbjct: 109 gtaagtcattctagcattttccata-ttcatattgatg 73
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 61.9 bits (31), Expect = 2e-09
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 33 taagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
|||||||||||| ||||| ||||| |||||||||||| |||||||||||||
Sbjct: 118 taagtcattctaacattttccaca-ttcatattgatgttaatgaatctaga 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcattt 50
||||||||||| |||| | |||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctagatagatat 90
||||| ||||||| ||||| |||| |||||||||||| ||||||||||||||||||||
Sbjct: 110 gtaagccattctatcatttttcaca-ttcatattgatgttaatgaatctagatagatat 53
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccaca 56
||||||||||| ||||| | ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccaca 49
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 60.0 bits (30), Expect = 8e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||||| |||||| |||| | ||||||| |||||||||| |||||| ||||||| ||||
Sbjct: 3 agtacttcctccgtttcataatgtaagtctttctagcattgcccaca-ttcatatagatg 61
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 62 ttaatgaatctaga 75
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 8e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||||| |||||| |||| | ||||||| |||||||||| |||||| ||||||| ||||
Sbjct: 3 agtacttcctccgtttcataatgtaagtctttctagcattgcccaca-ttcatatagatg 61
Query: 70 ctaatgaatctaga 83
|||||||||||||
Sbjct: 62 ttaatgaatctaga 75
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccaca 56
|||||||||||| ||||| | ||||||||||||||||||| |||||
Sbjct: 117 gtactccctccgtttcacaatgtaagtcattctagcattttccaca 72
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcattt 50
||||||||||| ||||| | | |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattt 43
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 60.0 bits (30), Expect = 8e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | |||||||||||||||||||| || | ||||||||||| |
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcata-ttcatattgatatt 68
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 67 aatgaatcta 58
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 8e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | |||||||||||||||||| || | | ||||||| |||| |
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctata-ttcatatagatgtt 100
Query: 72 aatgaatctagata 85
||||||||||||||
Sbjct: 99 aatgaatctagata 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctagata 85
|||||||||||||||| | | |||| ||||||| |||| |||||||||||||||
Sbjct: 25 gtaagtcattctagcaatgctcaca-ttcatatggatgttaatgaatctagata 77
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 60.0 bits (30), Expect = 8e-09
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
||||||||||| ||||| | |||||| |||||||||||| ||||| |||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccaca-ttcatattgat 70
Score = 58.0 bits (29), Expect = 3e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
||||||||||| ||||| | |||||| |||||||||||| ||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccaca-ttcatattgat 60
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 60.0 bits (30), Expect = 8e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||| ||||| | |||||||||||||| ||||| |||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcaca-ttcatattgatg 61
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 60.0 bits (30), Expect = 8e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||| |||||||||| |||||||||||| |
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccaca-ttcatattgatgtt 63
Query: 72 aatgaa 77
||||||
Sbjct: 64 aatgaa 69
Score = 60.0 bits (30), Expect = 8e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||||||| |||||||||| || ||||||||| |
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccaca-tttatattgatgtt 93
Query: 72 aatgaa 77
||||||
Sbjct: 92 aatgaa 87
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 119 tagaatgacttacattgtgaaacggaggaagta 151
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 60.0 bits (30), Expect = 8e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||| ||||| | |||||| |||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccaca-ttcatattgatg 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||| |||||| ||||| | ||||||||||||||||||| ||| | ||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccata-ttcatattgatg 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 99 tagaatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 60.0 bits (30), Expect = 8e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||||||||||||||||||||||| || ||| ||||| |
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccaca-tttatactgatgtt 63
Query: 72 aatgaa 77
||||||
Sbjct: 62 aatgaa 57
Score = 54.0 bits (27), Expect = 5e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatatt 65
||||| |||||| ||||| | |||||||||| |||||||||||||| ||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccaca-ttcatatt 57
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 60.0 bits (30), Expect = 8e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
|||| |||||| ||||| | |||||||||||||||||||| |||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcaca-ttcatattgatg 61
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 58.0 bits (29), Expect = 3e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
||||||||| | ||||| | |||||||||||||||| |||||||| |||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccaca-ttcatattgat 68
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 58.0 bits (29), Expect = 3e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
||||||||||| ||||| | |||||| |||||||||||| ||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccaca-ttcatattgat 60
Score = 58.0 bits (29), Expect = 3e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
||||||||||| ||||| | |||||| |||||||||||| ||||| |||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccaca-ttcatattgat 70
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccaca 56
||||||||||| |||| | |||||||||||||||||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccaca 84
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 58.0 bits (29), Expect = 3e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||||||||||||||||| |||| |||||| |
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccaca-ttcacattgatatt 77
Query: 72 aatgaatct 80
|||||||||
Sbjct: 76 aatgaatct 68
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccaca 56
||||||||||| ||||| | ||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacaca 49
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccaca 56
|||| |||||| ||||| | |||||||||||||||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccaca 51
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttc 51
|||||||||| | ||||| | ||||||||||||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattctagcatttc 44
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 63 tagaatgacttacattgtgaaacggaggaagta 95
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||| | |||||||||| |||| | ||||| | ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgccca-aattcatttagatgct 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
|||||||||||||||||| | |||| ||||||| |||| |||||||||||||
Sbjct: 112 gtaagtcattctagcattgcacaca-ttcatatagatgttaatgaatctaga 62
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| || ||||||||||||||||
Sbjct: 100 tagaatgacttacattatgaaatggaggaagta 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatt 49
||||||||||| |||| | ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctaga 83
|||||||||| |||||| ||||||| ||||||||||||||||||
Sbjct: 130 ttctagcattgcccaca-ttcatatagatgctaatgaatctaga 88
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||| |||||||||||||| ||||| | |||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccaca-ttcatgtagatgtt 63
Query: 72 aatgaatc 79
||||||||
Sbjct: 64 aatgaatc 71
Score = 46.1 bits (23), Expect = 1e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| |||| | | |||||||| |||||||| |||| ||||||| ||||
Sbjct: 157 gtactccctccgtttcataatgcaagtcattttagcatttttcaca-ttcatatagatgt 99
Query: 71 taatgaatcta 81
|||||||||||
Sbjct: 98 taatgaatcta 88
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||| | |||||| ||| |||||| ||||||| |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccaca-ttcatatagatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 56.0 bits (28), Expect = 1e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 38 cattctagcatttcccacagttcatattgatgctaatgaatctagatagatataga 93
||||||| ||||||||||| ||||||| | || ||||||||||||||| |||||||
Sbjct: 102 cattctaacatttcccaca-ttcatataggtgttaatgaatctagatatatataga 48
Score = 44.1 bits (22), Expect = 5e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 38 cattctagcatttcccacagttcatattgatgctaatgaatctaga 83
||||||||||||| ||||| ||||||| | || |||||||||||||
Sbjct: 1 cattctagcattttccaca-ttcatataggtgttaatgaatctaga 45
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | |||||||||||||||||| || | | ||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctata-ttcatatagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctagata 85
|||||||||||||||| | | |||| ||||||| |||| |||||||||||||||
Sbjct: 138 gtaagtcattctagcaatgctcaca-ttcatatggatgttaatgaatctagata 86
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | | |||||||| |||||||||||| | |||||||||||| |
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccata-ttcatattgatgtt 78
Query: 72 aatgaatctaga 83
||| ||||||||
Sbjct: 77 aataaatctaga 66
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 33 taagtcattctagcatttcccacagttcatattgatgctaatgaatct 80
||||||||||||||||| |||||| ||||||| |||| ||||||||||
Sbjct: 26 taagtcattctagcattgcccaca-ttcatatagatgttaatgaatct 72
Score = 54.0 bits (27), Expect = 5e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||||||||||| ||| |||||| ||| ||| ||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccaca-ttcttatagatact 98
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 97 aatgaatctag 87
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattga 67
|||| |||||| ||||| | |||||||||||||||||||||||| ||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccaca-ttcatattga 60
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcc 52
||||||||||| ||||| | ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcc 45
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 42 ctagcatttcccacagttcatattgatgctaatgaatctagatagat 88
||||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 88 ctagcatttcccaca-ttcatattgatgtcaatgaatctagacagat 43
Score = 44.1 bits (22), Expect = 5e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 46 catttcccacagttcatattgatgctaatgaatctaga 83
||||||||||| |||||||||||| ||||||||||||
Sbjct: 5 catttcccaca-ttcatattgatgtcaatgaatctaga 41
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | ||||| | |||||||||| |||||| ||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccaca-ttcatatatatgct 100
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 99 aatgaatctag 89
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttccc 53
|||||||||||| ||||| | |||||||||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttccc 46
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccaca 56
|||| |||||| ||||| | ||||||||||||||||||| |||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 76 tagaatgacttacattgtgaaacggaggaagta 108
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 54.0 bits (27), Expect = 5e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatatt 65
||||| |||||| ||||| | |||||||||||||||||||||||| ||||||||
Sbjct: 120 gtacttcctccgtttcacaatataagtcattctagcatttcccaca-ttcatatt 67
Score = 50.1 bits (25), Expect = 7e-06
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 33 taagtcattctagcatttcccacagttcatattgatg 69
|||||||||||||||||||||| | ||||||||||||
Sbjct: 26 taagtcattctagcatttcccata-ttcatattgatg 61
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 54.0 bits (27), Expect = 5e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||||||||||||| ||| ||| ||||||||| |
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcac-gtttatattgatgtt 73
Query: 72 aatgaat 78
|||||||
Sbjct: 72 aatgaat 66
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 99 tagaatgacttacattgtgaaacggaggaagta 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcattt 50
|||||||||||| ||||| | |||||||||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 54.0 bits (27), Expect = 5e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| |||| | ||||| | |||||||||| |||||| ||||||| ||||
Sbjct: 141 gtactccctccgtttcataatgtaagactttctagcattgcccaca-ttcatatagatgt 83
Query: 71 taatgaatcta 81
|||||||||||
Sbjct: 82 taatgaatcta 72
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctagata 85
|||||||||| |||||| ||||||| |||| |||||||||||||||
Sbjct: 5 ttctagcattgcccaca-ttcatatggatgttaatgaatctagata 49
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 52.0 bits (26), Expect = 2e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
|||||||||||| |||| | |||| | |||||||||| |||| | ||||||| |||||
Sbjct: 141 gtactccctccgtttcataatataagactttctagcattacccata-ttcatatagatgc 83
Query: 71 taatgaatctagat 84
||||||||||||||
Sbjct: 82 taatgaatctagat 69
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 52.0 bits (26), Expect = 2e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 46 catttcccacagttcatattgatgctaatgaatctaga 83
||||||||||| |||||||||||||||||||| |||||
Sbjct: 5 catttcccaca-ttcatattgatgctaatgaaactaga 41
Score = 52.0 bits (26), Expect = 2e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 46 catttcccacagttcatattgatgctaatgaatctaga 83
||||||||||| ||||||||||||||||| ||||||||
Sbjct: 112 catttcccaca-ttcatattgatgctaataaatctaga 76
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||| ||||| | ||||| |||||||||||||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccaca-ttcacattgatg 61
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 94 tagaatgacttacattgtgaaacggaggaagta 126
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttc 51
|||| |||||| ||||| | ||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttc 87
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||| | |||||||||| ||| || ||||||| |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgca-ttcatatagatgtt 100
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 48.1 bits (24), Expect = 3e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctaga 83
|||||||||| |||||| |||| || ||||||||||||||||||
Sbjct: 33 ttctagcattgcccaca-ttcacatagatgctaatgaatctaga 75
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 52.0 bits (26), Expect = 2e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 9 aagtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgat 68
|||||||||||||| |||| | ||||| | |||||||||| |||||| | ||||| |||
Sbjct: 150 aagtactccctccgtttcataatgtaagactttctagcattgcccaca-tacatatagat 92
Query: 69 gctaatgaatctag 82
| ||||||||||||
Sbjct: 91 gttaatgaatctag 78
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctagata 85
|||||||||| |||||| ||||||| |||| |||||||||||||||
Sbjct: 131 ttctagcattgcccaca-ttcatatagatgttaatgaatctagata 87
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | ||||||||| ||| |||| ||||| |||||||||||| |
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccaca-ttcatattgatgtt 72
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 71 aatgaatcta 62
Score = 44.1 bits (22), Expect = 5e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||| ||||| | |||||||||| | | |||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccaca-ttcatattgatg 61
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttc 51
|||||||||||| ||||| | |||||||||| |||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttc 44
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 87 atatagaatgacttaccttgtgaaatggaggaagtaa 123
|||||||||||||||| |||||||| ||||| |||||
Sbjct: 40 atatagaatgacttacattgtgaaacggagggagtaa 4
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 18 ctccggttcaccaagtaagtcattctagcatttcc 52
||||| ||||| | |||||||||||||||||||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcatttcc 49
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| |||||||| |||| ||||||
Sbjct: 57 tagaatgacttacattgtgaaacggagtaagtaa 90
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 50.1 bits (25), Expect = 7e-06
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||||| |||| | ||||| | |||||||||| || | | ||||||||||||
Sbjct: 3 agtactccctccgtttcataatgtaagactttctagcattgcctata-ttcatattgatg 61
Query: 70 ctaatgaatctag 82
||||||||||||
Sbjct: 62 ttaatgaatctag 74
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 93 aatgacttaccttgtgaaatggaggaagtaaga 125
|||||||||| |||||||| |||||||||||||
Sbjct: 80 aatgacttacattgtgaaacggaggaagtaaga 112
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcattt 50
||||| |||||| ||||| | |||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 16 ccctccggttcaccaagtaagtcattctagcattt 50
||||||| ||||| | |||||||||||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattt 74
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttc 51
||||| |||||| ||||| | ||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccaca 56
|||||||||||||||||||||||||
Sbjct: 25 gtaagtcattctagcatttcccaca 49
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagc 46
|||||||||||| ||||| | |||||||||||||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccaca 56
|||| |||||| ||||| | |||||||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcaca 49
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttaccttgtgaaatggaggaagta 122
||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 48.1 bits (24), Expect = 3e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctaga 83
||||| |||| |||||| ||||||| ||||||||||||||||||
Sbjct: 110 ttctatcattgcccaca-ttcatatagatgctaatgaatctaga 68
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 48.1 bits (24), Expect = 3e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | |||||| ||||||||||| ||||| ||||||| |||| |
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccaca-ttcatatagatgtt 79
Query: 72 aatgaatctaga 83
||| ||||||||
Sbjct: 78 aataaatctaga 67
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 48.1 bits (24), Expect = 3e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| |||| | ||||| | |||||||||| |||||| ||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccaca-ttcatatagatgtt 63
Query: 72 aatgaatctaga 83
||||||| ||||
Sbjct: 64 aatgaatttaga 75
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||| | |||||| ||| |||| | ||||||| |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccata-ttcatatagatgtt 100
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 48.1 bits (24), Expect = 3e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||| | |||||||||| ||||| ||||||| |||| |
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccaca-ttcatatagatgtt 82
Query: 72 aatgaatctaga 83
||| ||||||||
Sbjct: 81 aataaatctaga 70
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
|||| ||||||||||||| |||||| | ||||| |||| |||||||||||||
Sbjct: 112 gtaaatcattctagcattgcccaca-tgcatatagatgttaatgaatctaga 62
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 8 gaagtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattga 67
||||||||||||| | |||| | ||||| | |||||||||| ||||| ||||||| ||
Sbjct: 136 gaagtactccctctgtttcataatgtaagactttctagcattgtccaca-ttcatataga 78
Query: 68 tgctaatgaatctaga 83
|| |||||||||||||
Sbjct: 77 tgttaatgaatctaga 62
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttc 51
||||||||||| |||| | ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||| | | |||||||| | |||| ||||||| |||| |
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcaca-ttcatatagatgtt 63
Query: 72 aatgaatctaga 83
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 66/79 (83%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||| | || || |||| |||||| |||| || |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccaca-ttcacatagatgtt 100
Query: 72 aatgaatctagatagatat 90
|||||||||||||| ||||
Sbjct: 99 aatgaatctagatatatat 81
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctaga 83
|||||||||| |||||| ||||||| |||| |||||||||||||
Sbjct: 130 ttctagcattgcccaca-ttcatatagatgttaatgaatctaga 88
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctagatagatata 91
|||||||||| |||||| ||||||| ||| ||||||||||||||| |||||
Sbjct: 9 ttctagcattgcccaca-ttcatatatatgttaatgaatctagatatatata 59
Score = 46.1 bits (23), Expect = 1e-04
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctag 82
|||||||||| |||||| ||||||| |||| ||||||||||||
Sbjct: 106 ttctagcattgcccaca-ttcatatagatgttaatgaatctag 65
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 48.1 bits (24), Expect = 3e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctaga 83
|||||||||| |||||| ||||||| |||| |||||||||||||
Sbjct: 98 ttctagcattgcccaca-ttcatatagatgttaatgaatctaga 56
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctaga 83
|||||||||| |||||| ||||||| |||| |||||||||||||
Sbjct: 33 ttctagcattgcccaca-ttcatatagatgttaatgaatctaga 75
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
||||||| |||||| ||| |||||| ||||||| |||| |||||||||||||
Sbjct: 25 gtaagtctttctagtattgcccaca-ttcatatagatgttaatgaatctaga 75
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 gtactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgc 70
||||||||||| ||||| | |||| ||||| |||||||| || | || |||||||| |
Sbjct: 107 gtactccctccatttcacaatgtaaatcattttagcatttttcatattt-atattgatac 49
Query: 71 taatgaatctagata 85
|||||||||||||||
Sbjct: 48 taatgaatctagata 34
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctag 82
|||||||||| |||||| ||||||| ||||||||||||||||
Sbjct: 12 ttctagcattgcccaca-ttcatatctatgctaatgaatctag 53
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcattt 50
||||||||||| ||||| | |||| ||||||||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcattt 66
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 33 taagtcattctagcatttcccacagttcatattgatgctaatgaatctaga 83
||||||||| |||||||| || | |||||||||||| |||||||||||||
Sbjct: 111 taagtcattttagcattttccgta-ttcatattgatgataatgaatctaga 62
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 gtaagtcattctagcatttccc 53
||||||||||||||||||||||
Sbjct: 25 gtaagtcattctagcatttccc 46
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctag 82
|||||||||| |||||| ||||||| |||| ||||||||||||
Sbjct: 106 ttctagcattgcccaca-ttcatatagatgttaatgaatctag 65
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 46.1 bits (23), Expect = 1e-04
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctagatagatat 90
|||||||||| |||||| ||||||| |||| ||||||||||| ||| ||||
Sbjct: 33 ttctagcattgcccaca-ttcatatagatgttaatgaatctatatatatat 82
Score = 44.1 bits (22), Expect = 5e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatcta 81
|||||||||| |||||| ||||||| |||| |||||||||||
Sbjct: 132 ttctagcattgcccaca-ttcatatagatgttaatgaatcta 92
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatctag 82
|||||||||| |||||| ||||||| |||| ||||||||||||
Sbjct: 106 ttctagcattgcccaca-ttcatatagatgttaatgaatctag 65
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 93 aatgacttaccttgtgaaatggaggaagtaa 123
|||||||||| |||||||| |||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtaa 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 54/63 (85%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
|||| |||||| ||||| | |||||||||| ||| |||| ||||| |||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccaca-ttcatattgatgtt 63
Query: 72 aat 74
|||
Sbjct: 64 aat 66
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 10 agtactccctccggttcaccaagtaagtcattctagcatttcccaca 56
||||||||||||| ||||| | ||||| | |||||||||| ||||||
Sbjct: 160 agtactccctccgtttcacaatgtaagactttctagcattgcccaca 114
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatcta 81
|||||||||| |||||| ||||||| |||| |||||||||||
Sbjct: 104 ttctagcattgcccaca-ttcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 44.1 bits (22), Expect = 5e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||| ||||| | |||||||||| ||| |||| |||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcaca-ttcatattgatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 90 tagaatgacttaccttgtgaaatggaggaagtaa 123
||||||||||||| || ||||||||||| |||||
Sbjct: 84 tagaatgacttacattatgaaatggagggagtaa 117
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 44.1 bits (22), Expect = 5e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||| | ||||| | ||||| | |||||||||| |||||| ||||| | |||| |
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccaca-ttcatttagatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 40 ttctagcatttcccacagttcatattgatgctaatgaatcta 81
|||||||||| |||||| ||||||| |||| |||||||||||
Sbjct: 104 ttctagcattgcccaca-ttcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||| | |||||||||| |||||| | ||||| |||| |
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccaca-tacatatagatgtt 78
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 77 aatgaatcta 68
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | |||| | |||||||||| |||||| | ||||| |||| |
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccaca-tacatatagatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatgct 71
||||||||||| ||||| | ||||| | |||||| ||| ||||| || ||||| |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccac-gtacatatggatgtt 100
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 44.1 bits (22), Expect = 5e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 12 tactccctccggttcaccaagtaagtcattctagcatttcccacagttcatattgatg 69
||||||||||| |||| | ||||||||||||| |||||| |||| ||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcaca-ttcatatggatg 61
