miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 192 bits (97), Expect = 1e-48
Identities = 142/156 (91%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||| ||||||||||| |||||| | ||||||| ||||| |||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 98 atgaatctagatagatatatat--gtctagattcattaacatcaatataaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
||| ||||||||||||||||||||||||||||||
Sbjct: 40 tgcaaaaatgacttacattgtgaaacggaggaagta 5
Score = 155 bits (78), Expect = 2e-37
Identities = 132/149 (88%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | |||||| ||| ||||||||||||| | |||||| ||||||||||||||| ||
Sbjct: 72 tagacatatatatctat--ctagattcattaatatcaatatgaatgtgggaaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||| ||||||| ||||
Sbjct: 130 atgacttacattgtgatacggagggagta 158
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 192 bits (97), Expect = 1e-48
Identities = 142/156 (91%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||||
Sbjct: 65 atgaatctagatag--atatatatgtctacattcattaacatcaatatgaatgtgggaaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
| | |||||||||||||||||||||||||||||||
Sbjct: 123 tattagaatgacttacattgtgaaacggaggaagta 158
Score = 170 bits (86), Expect = 4e-42
Identities = 134/149 (89%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| || |||||| ||||| ||||||||||||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatgaatg 92
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | |||||| ||| ||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 91 tagacatatatatctat--ctagattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 186 bits (94), Expect = 6e-47
Identities = 142/156 (91%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | |||||| ||||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|| |||||| |||||||||||| ||||||||||||||||| |||||| ||| |||||||
Sbjct: 98 ataaatctatatagatatatat--gtctagattcattaacatcaatatgaatatgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||||||||||||||||||||| ||||
Sbjct: 40 tgcttgaatgacttacattgtgaaacggagggagta 5
Score = 155 bits (78), Expect = 2e-37
Identities = 138/156 (88%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||||| ||||||| | ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||| | |||||||| | | |||||| ||||||| |||||||||||| ||||
Sbjct: 65 atgaatctag--acatatatatctatatagatttattaacatcaatataaatgt--gaaa 120
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||| ||||
Sbjct: 121 tgctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 186 bits (94), Expect = 6e-47
Identities = 142/156 (91%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | |||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|| |||||| |||||||| ||||||||||||||||||||| |||||| ||| |||||||
Sbjct: 63 ataaatctatatagatat--atatgtctagattcattaacatcaatatgaatatgggaaa 120
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||||||||||||||||||||| ||||
Sbjct: 121 tgcttgaatgacttacattgtgaaacggagggagta 156
Score = 155 bits (78), Expect = 2e-37
Identities = 138/156 (88%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||||| ||||||| | ||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||| | |||||||| | | |||||| ||||||| |||||||||||| ||||
Sbjct: 96 atgaatctag--acatatatatctatatagatttattaacatcaatataaatgt--gaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 184 bits (93), Expect = 2e-46
Identities = 141/156 (90%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| ||||||| | ||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||| |||||||||||| ||||||||||||||||| || ||| |||||||||||
Sbjct: 98 atgaatctaaatagatatatat--gtctagattcattaacatcactatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| ||||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||| | |||||||| | | |||||||||||| | |||||| ||||||| |||
Sbjct: 65 atgaatctag--acatatatatctatttagattcattaatatcaatatgaatgtggaaaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|| | |||||||||||||||||||||||||| ||||
Sbjct: 123 tgttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 1e-44
Identities = 135/149 (90%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||| | |||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacatccatattgatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||||||||||| ||||||||||||||||||||| |||||| |||||||||||| || ||
Sbjct: 72 tagatagatat--atatgtctagattcattaacaacaatatgaatgtgggaaatactaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
Score = 163 bits (82), Expect = 9e-40
Identities = 139/157 (88%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| |||||| | |||||| ||||| |||||| ||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtt 100
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||||||||| | |||||| ||| ||||||||||||||| |||||| |||||| ||
Sbjct: 99 aatgaatctagacatatatatctat--ctagattcattaacatcaatatggatgtggaaa 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||||||||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 140/156 (89%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| |||||| |||||| ||| |||||| | ||||| ||||| |||||||| |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 98 atgaatctaaatagatatatat--gtctagattcattaacaccaatataaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||| | |||||||| | | |||||||||||| | |||||| |||||| |||
Sbjct: 65 atgaatctag--acatatatatctatttagattcattaatatcaatatgaatgtgaaaaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||| |||||| |||||||| ||||
Sbjct: 123 tgctagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 140/156 (89%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||| | | ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||| || |||||||| | |||||||||||||||| |||||| |||||||||||
Sbjct: 65 atgaatcta--tacatatatatttatctagattcattaacatcaatatgaatgtgggaaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggaggaagta 158
Score = 170 bits (86), Expect = 4e-42
Identities = 134/149 (89%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| |||||||||||||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 92
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||| |||||||| || |||||||||||||| |||||| ||| ||| ||||||| ||
Sbjct: 91 tagataaatatatat--gtatagattcattaacatcaatatgaatatggaaaatgctaga 34
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 9e-43
Identities = 135/150 (90%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| |||||| | ||||||| ||||| |||||| ||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtt 63
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
||||||||||||||| |||||||||||||||||||||| || |||||| ||||||||||
Sbjct: 64 aatgaatctagatag--atatatatgtctagattcattaccatcaatatgaatgtgggaa 121
Query: 121 atgcttgaatgacttacattgtgaaacgga 150
||| | |||||||||||||| |||||||||
Sbjct: 122 atggtggaatgacttacattatgaaacgga 151
Score = 168 bits (85), Expect = 1e-41
Identities = 139/156 (89%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | ||||||| ||||| ||||||||| ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | |||||| ||| ||||||||||||||| |||||| |||||||||||
Sbjct: 98 atgaatctagacatatatatctat--ctagattcattaacaacaatatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 172 bits (87), Expect = 9e-43
Identities = 139/156 (89%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 65 atgaatctagatag----gcatatgtccagattcattaacatcaatataaacgtgggaaa 120
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||| ||||||||||||||||||||
Sbjct: 121 tgctagaatgacttatattgtgaaacggaggaagta 156
Score = 135 bits (68), Expect = 2e-31
Identities = 129/149 (86%), Gaps = 4/149 (2%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| |||||| | ||||||| || ||||||||||||||||||||||
Sbjct: 149 tccgtttcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaatc 90
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
| || | || ||| ||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 89 tggacatatgcctat----ctagattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 168 bits (85), Expect = 1e-41
Identities = 140/156 (89%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| ||||| ||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||| | | ||| ||| || ||||||||||||||| |||||| |||||||||||
Sbjct: 97 atgaatctaaaca--tatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 165 bits (83), Expect = 2e-40
Identities = 133/149 (89%), Gaps = 3/149 (2%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||| | ||| |||||| |||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 72 tagc---acatacatatgtttagattcattaacatcaatatgaatgtgggaaatgctaga 128
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 129 atgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 168 bits (85), Expect = 1e-41
Identities = 139/156 (89%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| |||||| || ||||||| |||||| ||||||||| ||||| |||| | |||||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||| |||
Sbjct: 65 atgaatctagata--tatatagatgtctagattcattaacacctatatgaatgtggaaaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||| ||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagta 158
Score = 131 bits (66), Expect = 3e-30
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||| | ||||| |||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | ||||||||| ||||||||||||||||| |||| |||||||||||
Sbjct: 98 atgaatctagacatctatatatat--ctagattcattaacacctatatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacgga 150
|| | |||||||||||||| || ||||||
Sbjct: 40 tgttagaatgacttacattatggaacgga 12
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 163 bits (82), Expect = 9e-40
Identities = 136/156 (87%), Gaps = 11/156 (7%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| ||||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| ||||||||||||||||||| |||||| |||||||||||
Sbjct: 89 atgaatctaga-----------atgtctagattcattaacatcaatatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 133 bits (67), Expect = 8e-31
Identities = 127/149 (85%), Gaps = 11/149 (7%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | |||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 72 tagacat-----------tctagattcattaacatcaatatgaatgtgggaaatgctaga 120
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 121 atgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 163 bits (82), Expect = 9e-40
Identities = 138/156 (88%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| ||||||||| | ||||||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||||| |||| | | ||||||||||||| || |||||| |||||| ||||
Sbjct: 97 atgaatctagatatatat---tctatctagattcattaccatcaatatgaatgtgagaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||||||||||||||| |||||||||||||||
Sbjct: 40 tgctagaatgacttacattgcgaaacggaggaagta 5
Score = 149 bits (75), Expect = 1e-35
Identities = 131/149 (87%), Gaps = 3/149 (2%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
|||||||| |||||||| |||||| | |||||| ||||| ||||||||| |||||||||
Sbjct: 12 tccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||||| |||||| |||||||||||||||| ||||||||| ||||||||| | ||
Sbjct: 72 tagataga---atatatatctagattcattaacattaatataaatatgggaaatgttaga 128
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 129 atgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 133/149 (89%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||||| ||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||||||| ||||| ||||||| ||||||||||| |||||| |||| || | ||||| ||
Sbjct: 72 tagatag--atatagatgtctatattcattaacatcaatatgaatgcggaatatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
Score = 139 bits (70), Expect = 1e-32
Identities = 136/157 (86%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| |||||| | ||| | | |||| |||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtt 100
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
||||||| |||| | ||||| ||| ||||||||||||||| |||||| ||| | ||||
Sbjct: 99 aatgaatatagacatctatatctat--ctagattcattaacatcaatatgaatataggaa 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||||||||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 133/149 (89%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| ||||| | ||||||| ||||| ||||| |||||||||||||
Sbjct: 151 tccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatc 92
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||||||||||||||| ||||||||||||||||| |||||| |||||||| |||||| |
Sbjct: 91 tagatagatatatat--gtctagattcattaacatcaatatgaatgtgggtaatgctata 34
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 153 bits (77), Expect = 8e-37
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| ||||| | |||| || ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | |||||| ||| ||||||||||||||| ||||| |||||||||||
Sbjct: 65 atgaatctagacatatatatctat--ctagattcattaacattaatatgaatgtgggaaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||||||||| ||||||||||||||||||||
Sbjct: 123 tgctaaaatgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 133/149 (89%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
|||||||||||| |||| ||||| | ||||||| |||||||||||||||||||||||||
Sbjct: 151 tccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaatc 92
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||||| |||||| |||||||||||| |||| ||||||||||||||||||||| |
Sbjct: 91 tagatagaaatatat--gtctagattcataaacatcaatataaatgtgggaaatgcaaaa 34
Query: 129 atgacttacattgtgaaacggaggaagta 157
||||||||| |||||||||||||| ||||
Sbjct: 33 atgacttactttgtgaaacggagggagta 5
Score = 155 bits (78), Expect = 2e-37
Identities = 138/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| |||||||||||| |||| ||||| ||||||| |||||||||||||||||
Sbjct: 4 atactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtt 63
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
||||||||||| | |||| | ||| ||||||||||||||| |||||||||||||||||
Sbjct: 64 tatgaatctagacatatatttctat--ctagattcattaacatcaatataaatgtgggaa 121
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||| |||||||||||||||||||
Sbjct: 122 atgctaaaatgacttactttgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 161 bits (81), Expect = 3e-39
Identities = 138/156 (88%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | |||||| ||||| ||||||||||||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||||||| ||||||||||||||||||||||| | ||| || ||| | | |||
Sbjct: 65 atgaatctagatag--atatatatgtctagattcattaatatcaacatgaatttagaaaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||| ||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagta 158
Score = 141 bits (71), Expect = 3e-33
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| |||||| | ||||| ||| ||| || ||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatt 100
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||||||||| | |||||| ||| ||||||||||||||| |||||| |||||| |||
Sbjct: 99 aatgaatctagacatatatatctat--ctagattcattaacatcaatatgaatgtgagaa 42
Query: 121 atgcttgaatgacttacattgtgaaacgga 150
||| | ||||||||||||||||||||||||
Sbjct: 41 atggtagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 161 bits (81), Expect = 3e-39
Identities = 138/156 (88%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | |||| ||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||||||||||||||| ||||||||||||||| | |||||| |||||||||||
Sbjct: 98 atgaatctagatagatatatat--gtctagattcattaatatcaatatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|| | |||||||||||||||||||||||||| ||||
Sbjct: 40 tgttagaatgacttacattgtgaaacggagggagta 5
Score = 153 bits (77), Expect = 8e-37
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| ||||||||| ||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||| | |||||||| | |||||||||||||| | |||||| |||||| |||
Sbjct: 65 atgaatctag--acatatatatctatctagattcattaaaatcaatatgaatgtgaaaaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
| || |||||||||||||||||||||||||| ||||
Sbjct: 123 tactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 161 bits (81), Expect = 3e-39
Identities = 138/156 (88%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | |||| | ||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | |||||| ||| |||||||||||||||| ||||| |||||||||||
Sbjct: 98 atgaatctagacatatatatctat--ctagattcattaacactaatatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||||||||||||||||||||||||||||||
Sbjct: 40 tgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 155 bits (78), Expect = 2e-37
Identities = 132/149 (88%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| ||||| | ||||||| ||||| ||||| ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||| ||
Sbjct: 72 tagatagatat--atatgtctagattcattaacattaatatgaatgtggagaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 159 bits (80), Expect = 1e-38
Identities = 132/149 (88%), Gaps = 4/149 (2%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
|||||| |||||||||| |||||| | ||||| ||||||| ||||||||||||||||||
Sbjct: 12 tccgttccacaatgtaagtcattctagcattttctacattcatattgatgttaatgaat- 70
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| ||||||||||||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 71 ---gtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctaga 127
Query: 129 atgacttacattgtgaaacggaggaagta 157
||||||||||||||| |||||||| ||||
Sbjct: 128 atgacttacattgtggaacggagggagta 156
Score = 157 bits (79), Expect = 5e-38
Identities = 137/156 (87%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| |||||| |||||||||| |||||| | ||||||| ||||| ||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | |||||||||||| ||||||||||| |||||| ||||| | |||
Sbjct: 96 atgaatctagaca----tatatatgtctacattcattaacatcaatatgaatgtagaaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||||||||||||||||| |||||||||||||
Sbjct: 40 tgctagaatgacttacattgtggaacggaggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 132/149 (88%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| |||||| ||| ||| | ||||| ||||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctaactttttccacattcatattaatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||| |||||||||| ||||||||||||| | |||||| ||||||||||||||| ||
Sbjct: 72 tagataaatatatatat--ctagattcattaatatcaatatgaatgtgggaaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||| ||||||||||||||| ||||
Sbjct: 130 atgacttatattgtgaaacggagggagta 158
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||| ||| |||||| | ||||||| ||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||||| |||||||| | |||||||||||||||| ||||| ||||||| |||
Sbjct: 98 atgaatctagat--atatatatttatctagattcattaacattaatatgaatgtggaaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
| | |||||||||| ||||||||||||||||||||
Sbjct: 40 agttagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 132/149 (88%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| ||||||| |||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||||||| |||||||| ||||||||||||| || |||||| |||||||||||| || |
Sbjct: 72 tagatag--atatatatttctagattcattaccatcaatattaatgtgggaaattctaaa 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||| ||||||||||||||| ||||
Sbjct: 130 atgacttagattgtgaaacggagggagta 158
Score = 153 bits (77), Expect = 8e-37
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||| ||| ||||| | |||||| ||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | |||||| ||| |||||||||||||| |||||| |||||||||||
Sbjct: 98 atgaatctagaaatatatatctat--ctagattcattaacgtcaatatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 153 bits (77), Expect = 8e-37
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| ||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||| | |||||||| | ||||||||||||||| |||| |||||| ||||
Sbjct: 65 atgaatctag--acatatatatctatctagattcattaactaatatatgaatgtgagaaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggaggaagta 158
Score = 147 bits (74), Expect = 5e-35
Identities = 131/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | |||||| ||||| |||| |||||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttctcacattcatatattagttaatgaatc 92
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||||||||||||||| ||||||||||||||| | |||||| ||||||||||||| | ||
Sbjct: 91 tagatagatatatat--gtctagattcattaatatcaatatgaatgtgggaaatgataga 34
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 153 bits (77), Expect = 8e-37
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| ||||||| | ||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | |||||| ||| |||||||||||| | |||||| |||||| ||||
Sbjct: 98 atgaatctagacatatatatctat--ctagattcattagtatcaatatgaatgtgagaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||| ||||||||||||||||||||
Sbjct: 40 tgctagaatgacttatattgtgaaacggaggaagta 5
Score = 147 bits (74), Expect = 5e-35
Identities = 131/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| |||||| | |||||| ||||| |||||||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttctcacattcatattgatactaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||||||||||| |||||||||||||||||| || |||||| ||||||| ||||| | ||
Sbjct: 72 tagatagatat--atatgtctagattcattagcatcaatatgaatgtggtaaatgttaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 149 bits (75), Expect = 1e-35
Identities = 135/156 (86%), Gaps = 8/156 (5%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||| ||| |||||| | ||||||||||||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | |||| |||||||||||| || |||||| |||||||||||
Sbjct: 92 atgaatctagacatatat--------ctagattcattagcatcaatatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 135 bits (68), Expect = 2e-31
Identities = 128/149 (85%), Gaps = 8/149 (5%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| ||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||| ||||||||||||||||| || |||||| ||||| ||||||||| ||
Sbjct: 72 tagata--------tatgtctagattcattagcatcaatatgaatgtaggaaatgctaga 123
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||| ||||||||||||||| ||||
Sbjct: 124 atgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 149 bits (75), Expect = 1e-35
Identities = 128/148 (86%), Gaps = 12/148 (8%)
Strand = Plus / Minus
Query: 10 ccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatct 69
|||||||||||||||| |||||| | ||||||| ||||| ||||||||||||||||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat-- 83
Query: 70 agatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaa 129
||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 82 ----------atatatgtctagattcattaacattaatataaatgtgggaaatgctagaa 33
Query: 130 tgacttacattgtgaaacggaggaagta 157
||||||||||||||||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggaggaagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 119/141 (84%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||||||||| |||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | |||||| ||||||||| |||||| ||||||||||||||| ||
Sbjct: 72 tagacatatatat------------tcattaacatcaatatgaatgtgggaaatgctaga 119
Query: 129 atgacttacattgtgaaacgg 149
|||||||||||||||||||||
Sbjct: 120 atgacttacattgtgaaacgg 140
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 137/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| ||||| | ||||| | ||||| ||||| || ||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatt 63
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
||| ||| ||| || |||| ||||||||||||||||||||| |||||| ||||||||||
Sbjct: 64 aataaatttagctaaatat--atatgtctagattcattaacatcaatatgaatgtgggaa 121
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||||||||||||||||||| ||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggagggagta 158
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| ||||| ||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | |||||| || ||| ||| ||||| | ||||| ||||||| |||
Sbjct: 98 atgaatctagacatatatatttag--ctaaatttattaatataaatatgaatgtggaaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||||||||||||||||||||||||| ||||
Sbjct: 40 tgctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 131/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | |||| || | ||| |||| ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattacccatattcatatggatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||| | ||||| ||||||||||||||||||||| ||||| |||||| |||||||| ||
Sbjct: 72 tagttggatat--atatgtctagattcattaacattaatatgaatgtgagaaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | |||||| ||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | |||||| | ||||||||||||||| | |||| ||| |||| ||
Sbjct: 98 atgaatctagacatatatatccaa--ctagattcattaacatccatatgaatatgggtaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 131/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| ||||| | ||||||| ||||| ||||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||||||||||| |||||||||||||||||| || ||||||||||||| ||||||| ||
Sbjct: 72 tagatagatat--atatgtctagattcattatcatcaatataaatgtgaaaaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
||| |||| ||||||||||||||| ||||
Sbjct: 130 atggcttatattgtgaaacggagggagta 158
Score = 139 bits (70), Expect = 1e-32
Identities = 136/157 (86%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||| ||| ||||| | ||||| ||||||||||||||| |
Sbjct: 159 atactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgat 100
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||||||||| | |||||| ||| ||||||||||||||| ||||| ||||||||||
Sbjct: 99 aatgaatctagacatatatatctat--ctagattcattaacataaatatgaatgtgggaa 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| ||||||||| ||||||||||||||||||||
Sbjct: 41 atgctacaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||| ||| |||||| | ||||| ||| ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | |||||| ||| ||||| ||||||||| ||||| ||||||| |||
Sbjct: 98 atgaatctagacatatatatctat--ctagagtcattaacatcaatacgaatgtggaaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 130/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||| | ||||| ||||||||||||||| ||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatgactc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||||||||||| |||||||||||||||||| || |||||| ||| | | ||||||| ||
Sbjct: 72 tagatagatat--atatgtctagattcattagcatcaatatgaatatagaaaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||| ||||||||||||||| ||||
Sbjct: 130 atgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||| | ||||| ||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| |||||||||| |||||||||||| || | |||| ||||||| ||
Sbjct: 98 atgaatctagact--tatatatatgcctagattcattagcatctatatgaatgtggacaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||||||| |||||||||||||||||||||||
Sbjct: 40 tgctagaatgacatacattgtgaaacggaggaagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
|||||||||||||||| |||||| | |||| | ||||| |||| |||| |||||||||
Sbjct: 12 tccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||| | |||||||| ||||||||||||||||| |||||| ||||||| ||||||| ||
Sbjct: 72 taggca--tatatataagtctagattcattaacatcaatatgaatgtggaaaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 145 bits (73), Expect = 2e-34
Identities = 97/104 (93%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 54 tgatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatataaat 113
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||| |||
Sbjct: 61 tgatgttaatgaatctagatagatat--atatgtctagattcattaacatcactatgaat 118
Query: 114 gtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 119 gtgggaaatgctagaatgacttacattgtgaaacggagggagta 162
Score = 135 bits (68), Expect = 2e-31
Identities = 138/160 (86%), Gaps = 6/160 (3%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| ||||| ||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 62 atgaatctagatagatatatatatgtctagattcattaacacca----atataaatgtgg 117
|||||||||| | |||||||| | |||||||||||||||| || ||| ||| ||
Sbjct: 102 atgaatctag--acatatatatctatctagattcattaacatcactatgtatgaatatgc 45
Query: 118 gaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 141 bits (71), Expect = 3e-33
Identities = 134/156 (85%), Gaps = 8/156 (5%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | ||||||| ||||| |||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| |||| ||||||||||||| ||| |||||| |||||||||||
Sbjct: 92 atgaatctagacagat--------gtctagattcattgacatcaatatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|| | |||||||||||||||||||||||||||||||
Sbjct: 40 tgatagaatgacttacattgtgaaacggaggaagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 127/149 (85%), Gaps = 8/149 (5%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| |||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | | |||||||||||||| ||| |||||| ||||||||||||||| ||
Sbjct: 72 tagaca--------tctgtctagattcattgacatcaatatgaatgtgggaaatgctaga 123
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||| ||||||||||| ||||
Sbjct: 124 atgacttacattatgaaacggagggagta 152
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 139 bits (70), Expect = 1e-32
Identities = 137/157 (87%), Gaps = 3/157 (1%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||| ||||||||| | |||| | ||||| ||||| |||||||| ||
Sbjct: 4 atactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatt 62
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| ||
Sbjct: 63 aatgaatctagatagatat--atatgtctagattcattaacatcaatatgaatgtggaaa 120
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
|| | |||||||||||||||||||||||||| ||||
Sbjct: 121 atattagaatgacttacattgtgaaacggagggagta 157
Score = 131 bits (66), Expect = 3e-30
Identities = 136/157 (86%), Gaps = 3/157 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| |||||| || |||| | ||||| |||||||||||
Sbjct: 158 atactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtt 99
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
||||||||||| | |||||||| | |||||||||||||| | |||||| ||||||||||
Sbjct: 98 aatgaatctag--acatatatatctatctagattcattaatatcaatatgaatgtgggaa 41
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
| || |||| ||||||||||| ||||||||| ||||
Sbjct: 40 a-actagaataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 136/157 (86%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| |||||| | ||||||| ||||| |||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 100
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
||||||||| ||| |||||| ||||||||||||||||||| | |||| |||||| |||
Sbjct: 99 gatgaatctaaata--tatatagatgtctagattcattaacatctatatgaatgtgagaa 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||| | ||||||||||| ||||||||||||| ||||
Sbjct: 41 atgataaaatgacttacaatgtgaaacggagggagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||| ||||| ||||| | |||||| ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | ||||||||| | |||||||| |||| | |||| |||||||||||
Sbjct: 65 atgaatctagacatctatatatattt--agattcatcaacatctatatgaatgtgggaaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||| ||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 99/108 (91%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 50 atattgatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatat 109
|||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||
Sbjct: 53 atattgatgttaatgaatctagatagatat--atatgtctagattcattaatatcaatat 110
Query: 110 aaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||||||| || ||||| |||||||||||||||||||| ||||
Sbjct: 111 gaatgtgggaaatactagaatgtcttacattgtgaaacggagggagta 158
Score = 107 bits (54), Expect = 5e-23
Identities = 132/157 (84%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| ||||| | |||||| ||||| |||||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatt 100
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
||||||||||| | |||||||| | |||||||||||||||| |||||| | | ||
Sbjct: 99 aatgaatctag--acatatatatctatctagattcattaacatcaatatttctagtgaaa 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
|| || |||||||||||||||||||||||||| ||||
Sbjct: 41 atactagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| ||||| | |||||| |||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | ||||||| ||||||||||||||| | | ||| |||||||||||
Sbjct: 98 atgaatctagaca--tatatatccgtctagattcattaatataagtatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| ||| | || ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| ||||| |||||||||||||||||| || |||||| ||||| |||||||| |
Sbjct: 72 tagacggatat--atatgtctagattcattagcatcaatatggatgtgagaaatgctaaa 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 131/151 (86%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | ||||||||| ||| |||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||| |||||||| ||||||||||||||| |||| | |||| |||||||||||
Sbjct: 65 gtgaatctatatagatat--atatgtctagattcactaacctccatatgaatgtgggaaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggagg 152
|||| |||||||||||||| |||||||||||
Sbjct: 123 tgctagaatgacttacattatgaaacggagg 153
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 3 actccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaa 62
||||| ||||||||| ||||||| |||||| | ||||||| ||||| |||| || ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 63 tgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaat 122
|||||||||| | |||||| ||| | ||||||| |||| | |||| ||| | ||||||
Sbjct: 97 tgaatctagacatatatatctatat--agattcactaacctctatatgaatataggaaat 40
Query: 123 gcttgaatgacttacattgtgaaacggaggaagta 157
||| |||||||||||||| ||||||||||| ||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 133 bits (67), Expect = 8e-31
Identities = 134/156 (85%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||| ||||| ||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||||| |||||||||||| ||||||||||| | ||| |||||||||||
Sbjct: 96 atgaatctagata----tatatatgtctaaattcattaacatgagtatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
||| |||||||||| ||||||||||||||||||||
Sbjct: 40 tgccagaatgacttatattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 125/149 (83%), Gaps = 4/149 (2%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| |||||| ||||||| ||||| ||| | ||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaat- 70
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| |||||||| |||||||||||||||| | ||| |||||| ||||||| ||
Sbjct: 71 ---ttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgctaga 127
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 128 atgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 135/157 (85%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| |||||| ||||||| ||| ||| |||| |||| |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgct 63
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||||||| || |||||||||| || |||||||| || | |||| ||||||| ||
Sbjct: 64 aatgaatcta--tacgcatatatatgtttaaattcattagcatctatatgaatgtggaaa 121
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||||||||||||||||||| ||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 130/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| |||||| | ||||| | ||||| |||| |||| |
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgct 100
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
||||||| | | | |||||||| || ||||||||||| || | |||| ||| | | ||
Sbjct: 99 aatgaattt--aaacatatatatgcgtatagattcattagcatctatatgaatatagaaa 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||| | |||||||||||||||||||||||||| ||||
Sbjct: 41 atgttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 131 bits (66), Expect = 3e-30
Identities = 99/109 (90%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 27 tcattcaaacatttcctacatttatattgatgttaatgaatctagatagatatatatatg 86
|||||| | |||||| ||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 4 tcattctagcatttctcacattcatattgatgttaatgaatctagatagatat--atatg 61
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
|||||||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 62 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 107 bits (54), Expect = 5e-23
Identities = 96/109 (88%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 27 tcattcaaacatttcctacatttatattgatgttaatgaatctagatagatatatatatg 86
|||||| | ||||||| ||||| ||||||||||||||||||||||| | |||||| |||
Sbjct: 107 tcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatctat- 49
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
||||||||||||||| |||||| |||||| |||||||| |||||||||
Sbjct: 48 -ctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 131 bits (66), Expect = 3e-30
Identities = 99/109 (90%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 27 tcattcaaacatttcctacatttatattgatgttaatgaatctagatagatatatatatg 86
|||||| | ||||||| ||||| ||||||||||||||||||||| |||||||||||| |
Sbjct: 107 tcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat--g 50
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
|||||||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 49 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 107 bits (54), Expect = 5e-23
Identities = 96/109 (88%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 27 tcattcaaacatttcctacatttatattgatgttaatgaatctagatagatatatatatg 86
|||||| | ||||||| ||||| ||||||||||||||||||||||| | |||||| |||
Sbjct: 4 tcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatt 63
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
| ||||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 64 t--agattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | |||| || ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | | || ||||| ||| ||||||||||| | ||||| ||||||| ||
Sbjct: 65 atgaatctagacacacatctatat--ctaaattcattaacatctatatatatgtgggcaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||| ||||||||||||||||
Sbjct: 123 tgctagaatgacttacattatgaaacggaggaagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 127/149 (85%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| |||||| | |||| || |||| ||||| |||||||||||||
Sbjct: 151 tccgtttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaatt 92
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||| || || | |||||||||||||||||| | |||| ||||| || |||||| ||
Sbjct: 91 tagata--tagatgtgtgtctagattcattaacatctatatgaatgttggtaatgctaga 34
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||| ||||||||||| ||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 129 bits (65), Expect = 1e-29
Identities = 74/77 (96%)
Strand = Plus / Minus
Query: 81 tatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacatt 140
|||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 141 gtgaaacggaggaagta 157
|||||||||||||||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 69 taga 72
||||
Sbjct: 72 taga 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 132 acttacattgtgaaacggaggaagta 157
||||||||||||||||||||| ||||
Sbjct: 82 acttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | |||| |||| ||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||||| | | |||||| ||||||||||||||| | |||| |||||| | |
Sbjct: 98 atgaatctagatatagacatatat--ctagattcattaacatccatatgaatgtgagcat 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||| ||||||||||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/149 (83%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| |||||| | || | | ||||| |||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||| || | ||||| ||||||||||||||| | |||| ||| | || |||||| ||
Sbjct: 72 tagatatatgtctatat--ctagattcattaacatctatatgaatataggcaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||| ||||||||||| ||||
Sbjct: 130 atgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 125 bits (63), Expect = 2e-28
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 79 tatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttaca 138
|||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 139 ttgtgaaacggaggaagta 157
|||||||||||||| ||||
Sbjct: 23 ttgtgaaacggaggtagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 69 taga 72
||||
Sbjct: 72 taga 75
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 119 aaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| |||||||||||||||||||||||||||||||
Sbjct: 102 aaatgctagaatgacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 123 bits (62), Expect = 8e-28
Identities = 133/156 (85%), Gaps = 8/156 (5%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | | ||| | ||||| ||||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||| | |||||||||| |||| |||||||| ||| |||||| ||||||| |||
Sbjct: 92 atgagtttagatagatacatat--gtctagatacat------caatatgaatgtggaaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 123/149 (82%), Gaps = 8/149 (5%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||| | ||||| |||||||||| |||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt------atc 65
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | || ||| ||| ||| | ||||||||| |||||| ||||||| ||| ||| ||
Sbjct: 66 tagacatatgtatctat--ctaaactcattaacatcaatatgaatgtggaaaaggctaga 123
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 124 atgacttacattgtgaaacggagggagta 152
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 121 bits (61), Expect = 3e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 73 tagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatga 132
|||||| |||||||||||||| |||||||| |||||| ||||||||||||||| ||||||
Sbjct: 45 tagatagatatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatga 104
Query: 133 cttacattgtgaaacggaggaagta 157
|||||||| ||||||||||||||||
Sbjct: 105 cttacattatgaaacggaggaagta 129
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| |||||| | ||||||| ||||| ||||||||||||||| |||
Sbjct: 122 tccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttaatggatc 63
Query: 69 taga 72
||||
Sbjct: 62 taga 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 132 acttacattgtgaaacggaggaagta 157
||||||||||||||||||||| ||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 121 bits (61), Expect = 3e-27
Identities = 95/106 (89%), Gaps = 4/106 (3%)
Strand = Plus / Plus
Query: 52 attgatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatataa 111
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |
Sbjct: 48 attgatgttaatgaatctagatagatat----atgtctagattcattaacatcaatatga 103
Query: 112 atgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|| ||||||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 104 atatgggaaatgctaaaatgacttatattgtgaaacggagggagta 149
Score = 95.6 bits (48), Expect = 2e-19
Identities = 130/156 (83%), Gaps = 11/156 (7%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||| ||| ||||| | ||||||| | ||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||| |||| |||||| | ||||||||||||||| || |||||||||||
Sbjct: 89 atgaatc----tagacatatatctatctagattcattaac------atcaatgtgggaaa 40
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||| ||||||||||||||||| |||||||||
Sbjct: 39 tgctagaa-gacttacattgtgaaacagaggaagta 5
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | |||| |||| ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | | | |||||| ||||||||||||||| | |||| |||||| | |
Sbjct: 65 atgaatctagacatagacatatat--ctagattcattaacatccatatgaatgtgagcat 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||| ||||||||||||||||
Sbjct: 123 tgctagaatgacttacattatgaaacggaggaagta 158
Score = 107 bits (54), Expect = 5e-23
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| |||||| | || | | ||||| |||| ||||||||||||||
Sbjct: 151 tccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatc 92
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||| ||| | |||||||||||||||||||| | |||| ||| | || |||||| ||
Sbjct: 91 tagata--tatgtctatgtctagattcattaacatctatatgaatataggcaatgctaga 34
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||| ||||||||||| ||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 123/144 (85%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | |||||| ||||| |||||||||| ||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatc 92
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||| | |||||| |||||||||||||| | |||||| |||||| || ||||| ||
Sbjct: 91 tag--acatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 129 atgacttacattgtgaaacggagg 152
||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
Score = 117 bits (59), Expect = 5e-26
Identities = 123/144 (85%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||| || ||||| ||||||| | ||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | || ||||||||||||||||||| ||| |||||| |||||| |||||||| ||
Sbjct: 72 tagaca--tacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129
Query: 129 atgacttacattgtgaaacggagg 152
||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 117 bits (59), Expect = 5e-26
Identities = 133/157 (84%), Gaps = 8/157 (5%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||| ||| ||||| | ||||| | ||||||||||||||| |
Sbjct: 153 atactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgct 94
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||||||||| ||||||| ||| |||||||| || |||| |||||||| |||
Sbjct: 93 aatgaatctaga--gatatat------ctaaattcattagcatcaatgtaaatgtgagaa 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| ||||||||||||||||||||||||||||||
Sbjct: 41 atgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 124/149 (83%), Gaps = 8/149 (5%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| ||||| | |||||| ||||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaatgaatt 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||| ||| ||||||||||||| || |||||||||||||| ||||||| |
Sbjct: 72 tagata--------tatctctagattcattagcatcaatataaatgtggaaaatgctaaa 123
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||| ||||||||||||||| ||||
Sbjct: 124 atgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 117 bits (59), Expect = 5e-26
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 79 tatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttaca 138
|||||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 139 ttgtgaaacggaggaagta 157
|||||||||||||||||||
Sbjct: 117 ttgtgaaacggaggaagta 135
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 105 aatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| ||||| || ||||||||||
Sbjct: 128 tccgtttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaatc 69
Query: 69 taga 72
||||
Sbjct: 68 taga 65
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatatt 54
||||||| ||| ||||||||||||| |||||| | ||||||| ||||| |||||
Sbjct: 4 atactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 115 bits (58), Expect = 2e-25
Identities = 132/156 (84%), Gaps = 8/156 (5%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||| | ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||| | ||||||| ||| |||||||||||| ||| |||||| ||| ||| |||
Sbjct: 65 atgagtttagatag--atacatatgtctagat------acatcaatatgaatatggaaaa 116
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||||||||||||||
Sbjct: 117 tgctagaatgacttacattgtgaaacggaggaagta 152
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 94 tcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggagga 153
||||||||| | |||| ||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 154 agta 157
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 133/157 (84%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||| ||||||| |||||| | |||| || | ||| |||| ||||||
Sbjct: 159 atactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtt 100
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||||||||| | | || ||||| ||| ||||||||||| | |||| ||||||| |
Sbjct: 99 aatgaatctagacacacatctatat--ctaaattcattaacatctatatgtatgtgggca 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||||||| ||||||||||||||||
Sbjct: 41 atgctagaatgacttacattatgaaacggaggaagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| |||||| | |||| || |||| |||| |||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaatt 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||| || || | |||||||||||||||||| | |||| ||| |||| |||||| ||
Sbjct: 72 tagata--tagatgtgtgtctagattcattaacatctatatgaatatgggtaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||| ||||||||||| ||||
Sbjct: 130 atgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 115 bits (58), Expect = 2e-25
Identities = 130/157 (82%), Gaps = 14/157 (8%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| |||||| | ||||| | ||||| |||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||| ||||||||| ||||| |||||||| |||||| ||||||||||
Sbjct: 64 aatgtatctagata--------------tagatacattaacatcaatatgaatgtgggaa 109
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| ||||||||||||||||| |||||||||||||
Sbjct: 110 atgctagaatgacttacattgtggaacggaggaagta 146
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
||||||| |||||||| |||||| ||||||| ||||||| ||||||||||||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacat 139
|||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 140 tgtgaaacggaggaagta 157
||||||||||||||||||
Sbjct: 113 tgtgaaacggaggaagta 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||| |||||||| |||| ||||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| ||||| | |||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttcccacattcatattagtactaatgaatc 64
Query: 69 taga 72
||||
Sbjct: 63 taga 60
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 62 atgaatctagatagatat 79
||||||||||||||||||
Sbjct: 76 atgaatctagatagatat 59
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 126 cggagggagta 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 58 caatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
||||||||||||||||| |||||| | ||||||| | ||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 113 bits (57), Expect = 7e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtga 144
|||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 145 aacggaggaagta 157
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| |||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatc 71
Query: 69 taga 72
||||
Sbjct: 72 taga 75
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 99 aacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
|||||| ||||||||| ||||||| |||||| | ||||||| ||||| |||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 96/108 (88%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 50 atattgatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatat 109
||||||||| |||||||||||||||||||||||| ||||||||||||| || | ||||
Sbjct: 110 atattgatgctaatgaatctagatagatatatat--gtctagattcattggcatcgatat 53
Query: 110 aaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| ||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 52 gaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 129/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||| ||||||| |||||| | ||||| | ||||| |||| ||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
||||||||||| | |||||||| | ||||||||||||| || |||||| ||||| |
Sbjct: 64 aatgaatctag--acatatatatctatctagattcattagcatcaatatggatgtgaaca 121
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
|| | |||||||||||||| ||||||||||| ||||
Sbjct: 122 atagtagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 113 bits (57), Expect = 7e-25
Identities = 126/149 (84%), Gaps = 5/149 (3%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| |||||| | |||||| ||||| |||||||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagtatttcccacattcatattgatactaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||||||||| |||||||| |||| || |||||| ||||||||||||| | ||
Sbjct: 72 tagatagatata-----gtctagatccattggcatcaatatgaatgtgggaaatggtgga 126
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||| ||||||||||| ||||
Sbjct: 127 atgacttacattatgaaacggagggagta 155
Score = 111 bits (56), Expect = 3e-24
Identities = 131/156 (83%), Gaps = 5/156 (3%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | ||||||| ||||| ||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||| ||||||| ||||| | ||||||||||||| | |||||| |||||||||||
Sbjct: 95 atggatctagac-----tatatctatctagattcattagtatcaatatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
| || |||||||||| ||||||||||||||||||||
Sbjct: 40 tactagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 113 bits (57), Expect = 7e-25
Identities = 131/157 (83%), Gaps = 9/157 (5%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||| ||| |||||| | |||||| ||||| |||||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtt 63
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||| ||| || || || || |||||||||| |||||||||||||||||
Sbjct: 64 aatgaaactacatctattta---------agtttcattaacatcaatataaatgtgggaa 114
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
|| || |||||||||||||||||||||||||||||||
Sbjct: 115 atactagaatgacttacattgtgaaacggaggaagta 151
Score = 95.6 bits (48), Expect = 2e-19
Identities = 124/149 (83%), Gaps = 9/149 (6%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | |||||| ||||||||||||||||||||||| |
Sbjct: 144 tccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgttaatgaaac 85
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
| || ||| ||| ||| |||||||||| |||||| |||||||||||| | ||
Sbjct: 84 t-------taaatagatg--tagtttcattaacatcaatatgaatgtgggaaataataga 34
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||| ||||||||||||||| ||||
Sbjct: 33 atgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 91 gattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacgga 150
|||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 151 ggaagta 157
|||||||
Sbjct: 11 ggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 91 gattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacgga 150
|||||||||||| |||||| |||||| |||||||| |||||| |||||||||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 151 ggaagta 157
|| ||||
Sbjct: 135 gggagta 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 107 bits (54), Expect = 5e-23
Identities = 129/157 (82%), Gaps = 14/157 (8%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| |||||| | ||||| | | |||||||||||| ||
Sbjct: 147 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatt 88
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||||||| || ||||||||||||||| |||||| |||||| |||
Sbjct: 87 aatgaatctacat--------------ctagattcattaacatcaatatgaatgtgagaa 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||||||||||||||||| ||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaagaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 122/149 (81%), Gaps = 14/149 (9%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | |||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||||| |||||||||||| | |||||||||| ||| ||||||| ||
Sbjct: 72 tagatg--------------tagattcattaatatcaatataaatatggaaaatgctaga 117
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 118 atgacttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 107 bits (54), Expect = 5e-23
Identities = 84/93 (90%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 65 aatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgc 124
||||||||||||||||||| ||||||||||||||||| |||||| ||| || |||||||
Sbjct: 95 aatctagatagatatatat--gtctagattcattaacatcaatatgaatatgagaaatgc 38
Query: 125 ttgaatgacttacattgtgaaacggaggaagta 157
| |||||||||||||| ||||||||||| ||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/156 (80%), Gaps = 15/156 (9%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | |||||| | ||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | |||||| ||| ||||||| || |||||||||||
Sbjct: 65 atgaatctagacatatatatctat--ctagatt-------------atgaatgtgggaaa 109
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||| ||||||||||||||
Sbjct: 110 tgctagaatgacttacattgtaaaacggaggaagta 145
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtga 144
|||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 145 aacggaggaagta 157
|||||||| ||||
Sbjct: 127 aacggagggagta 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| | ||| ||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 79 atgaatctaga 69
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 115 tgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 105 bits (53), Expect = 2e-22
Identities = 127/155 (81%), Gaps = 15/155 (9%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||| | | ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| ||||||| ||||||| ||||||||||||| ||||
Sbjct: 85 atgaatctaga---------------ctagatttattaacatcaatataaatgtgagaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagt 156
|||| |||||||||||||| |||||||||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggaagt 6
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 86 gtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaa 145
||||||||||||||||| |||||| ||| ||| ||||||| |||||||||||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 146 acggaggaagta 157
||||||| ||||
Sbjct: 134 acggagggagta 145
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 81 tatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacatt 140
||||||||||||||||||| || |||||||||| || |||||||| |||||||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 141 gtgaaacggaggaagta 157
|||||||||||||||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| ||||| | |||||| | ||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaatc 71
Query: 69 taga 72
||||
Sbjct: 72 taga 75
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||| ||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 86 caatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 128/156 (82%), Gaps = 14/156 (8%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| || |||||||||||||| |||||| | ||||||| ||||| ||||||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||| ||||| | |||||||||||||| |||||| ||||||| |||
Sbjct: 86 atgaaactagaca--------------tagattcattaacatcaatatgaatgtggaaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||| ||||||||||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 83 tatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgt 142
||||||||| |||||||||| |||||| ||||||||||||||| ||||||||||||||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 131
Query: 143 gaaacggaggaagta 157
||||| |||| ||||
Sbjct: 132 gaaaccgagggagta 146
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtga 144
|||||||||| || |||| |||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 145 aacggaggaagta 157
|||||||||||||
Sbjct: 132 aacggaggaagta 144
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 92 attcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggag 151
|||||| |||| |||||| ||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 152 gaagta 157
| ||||
Sbjct: 10 ggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| ||||||||||| || ||||
Sbjct: 137 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttcataaatc 78
Query: 69 taga 72
||||
Sbjct: 77 taga 74
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtga 144
|||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 145 aacggaggaagta 157
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| | ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 115 tgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 97 tgggaaatgctagaatgacttacattatgaaacggaggaagta 139
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | |||| |||| |||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||||| |||||||| ||||||||||||| || | |||| ||||||| |||
Sbjct: 98 atgaatctagataaatatatat--gtctagattcattggcatcgatatgaatgtggaaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||| ||||||||||| ||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 130/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||| ||||||| |||||| | ||||| | ||||| |||| ||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||||||||| | |||||| ||| |||||||||||| || | |||| ||||| ||
Sbjct: 64 aatgaatctagacatatatatttat--ctagattcattagcatcgatatggatgtgaaaa 121
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
|| || |||||||||||||| ||||||||||| ||||
Sbjct: 122 atactagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| | || |||||| || ||||| | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||||| ||||| | |||||||||||||||||| | |||| |||||| | ||
Sbjct: 98 atgaatctagata--tatatgtgtgtctagattcattaacatctatatgaatgtgagcaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| | | | |||||||||||||||||||| ||||
Sbjct: 40 tgctaggaagtcttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 128/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| | | | | |||| | ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | | ||||||| |||||||||||||||| | || | |||||||| ||
Sbjct: 65 atgaatctagacacacatatata--tctagattcattaacatctatgtgaatgtgggcaa 122
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|| | || | |||||||||||||||||||| ||||
Sbjct: 123 tgttaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 105 bits (53), Expect = 2e-22
Identities = 92/104 (88%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 28 cattcaaacatttcctacatttatattgatgttaatgaatctagatagatatatatatgt 87
||||| ||||||||| ||||| |||| | |||||||||||||||||| |||||| ||||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagata--tatatagatgt 45
Query: 88 ctagattcattaacaccaatataaatgtgggaaatgcttgaatg 131
||||||||||||||||| |||| ||||||| ||||||| |||||
Sbjct: 44 ctagattcattaacacctatatgaatgtggaaaatgctagaatg 1
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| | |||||||||||||||| | ||||||||| ||||||||||||||||
Sbjct: 17 acattcatataggtgttaatgaatctagacatctatatatat--ctagattcattaacac 74
Query: 104 caatataaatgtgggaaatg 123
| |||| |||||||||||||
Sbjct: 75 ctatatgaatgtgggaaatg 94
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 95/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 50 atattgatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatat 109
|||| |||||||||||||||||| | |||||||| ||||||||||||||||| | ||||
Sbjct: 110 atatagatgttaatgaatctagacacatatatat--gtctagattcattaacatctatat 53
Query: 110 aaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| ||| || ||| |||||||||| ||||||||||||||||
Sbjct: 52 gaatgtgggcaatactagaaagacttacattatgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/149 (83%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| || ||| | ||| || ||||| |||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | ||||||| |||||||||||||||||| | |||| ||| || | |||||| ||
Sbjct: 72 tagaca--tatatatgtgtctagattcattaacatctatatgaatatgagcaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
| | |||||||| ||||||||||| ||||
Sbjct: 130 aagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 90 agattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacgg 149
|||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 150 aggaagta 157
||||||||
Sbjct: 12 aggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 96 attaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaag 155
||||||| |||||| ||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 156 ta 157
||
Sbjct: 136 ta 137
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||||| ||||| ||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatc 71
Query: 69 t 69
|
Sbjct: 72 t 72
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| |||||||||||| |||| |||||| | ||||||| ||||| ||||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 62 at 63
||
Sbjct: 77 at 76
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 7e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 78 atatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttac 137
|||||||||||| |||||||||||| | | || ||||||||||||||| ||||||||||
Sbjct: 84 atatatatgtcttgattcattaacatctacatgaatgtgggaaatgctaaaatgacttac 25
Query: 138 attgtgaaacggaggaagta 157
||||||||||||||||||||
Sbjct: 24 attgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 123/149 (82%), Gaps = 4/149 (2%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| ||||| | ||||||| ||||| || | ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||| ||||||||| |||||||||||||| | |||| |||||| ||||||| |
Sbjct: 72 ----aagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatgctaaa 127
Query: 129 atgacttacattgtgaaacggaggaagta 157
||||||| |||| ||||||||||| ||||
Sbjct: 128 atgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 103 bits (52), Expect = 7e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattg 141
|||| |||||||||||||| | |||||| ||||||||||||||| ||||||||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 142 tgaaacggaggaagta 157
||||||||||||||||
Sbjct: 100 tgaaacggaggaagta 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| |||||| | ||||||| ||||| |||||||| ||||||||||
Sbjct: 108 tccgtttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaatc 49
Query: 69 tagata 74
||||||
Sbjct: 48 tagata 43
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||||||||||||||||||| ||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattc 32
|||||| ||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattc 35
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 7e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattg 141
|||||| |||||||||||||| |||||| ||||||||||||||| |||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 142 tgaaacggaggaagta 157
||||||||||| ||||
Sbjct: 125 tgaaacggagggagta 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 96 attaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaag 155
||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 156 ta 157
||
Sbjct: 6 ta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||| ||| |||||| | ||||||| ||||| ||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 62 atgaatcta 70
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| |||||| |||||||| ||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 147 cggaggaagta 157
|||| ||||||
Sbjct: 15 cggaagaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 121/149 (81%), Gaps = 14/149 (9%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | |||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | |||||||||||| | |||||||||| ||| ||||||| |
Sbjct: 72 taga--------------tgtagattcattaatatcaatataaatatggaaaatgctata 117
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 118 atgacttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 91 gattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacgga 150
|||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 151 ggaagta 157
|||||||
Sbjct: 128 ggaagta 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| ||||| | ||||||| ||||| |||||||||||||||||||
Sbjct: 127 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaatc 68
Query: 69 tagata 74
|||||
Sbjct: 67 aagata 62
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacgga 150
|||||| ||||||| |||||| |||||||||||||||||||||||
Sbjct: 58 caatatgaatgtggaaaatgccaaaatgacttacattgtgaaacgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcatt 31
|||||||||||||||||||||||| |||||
Sbjct: 5 tactccatccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||| | ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 109 taaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||||| | ||||||||| |||| ||||||||||||||||
Sbjct: 86 taaatgtgggaaatgttagaatgacttccattatgaaacggaggaagta 134
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| ||| ||||||||||| |||||||||||||| |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 147 cggaggaagta 157
|||||||||||
Sbjct: 130 cggaggaagta 140
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| | ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 62 atgaatctagat 73
||||||||||||
Sbjct: 65 atgaatctagat 76
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| |||||| | ||||||| | ||| |||||||||||||||||||
Sbjct: 133 tccgtttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaatc 74
Query: 69 tagat 73
|||||
Sbjct: 73 tagat 69
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| |||||| |||||||| |||||||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 147 cggaggaagta 157
|||||||||||
Sbjct: 117 cggaggaagta 127
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| |||||| | |||||| ||||| |||||||||||||||||||
Sbjct: 120 tccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaatc 61
Query: 69 tagatag 75
|||||||
Sbjct: 60 tagatag 54
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 118 gaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 88 ctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaac 147
|||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 148 ggaggaagta 157
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| ||||| | ||||||| ||||| ||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatc 71
Query: 69 tag 71
|||
Sbjct: 72 tag 74
Score = 63.9 bits (32), Expect = 6e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 95 cattaacaccaatataaatgtgggaaatgcttga-atgacttacattgtgaaacggagga 153
||||| || |||||| ||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 139
Query: 154 agta 157
||||
Sbjct: 140 agta 143
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 99.6 bits (50), Expect = 1e-20
Identities = 127/156 (81%), Gaps = 15/156 (9%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | |||||| | ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|| ||||||||||||| ||| ||| || |||||| |||||||||||
Sbjct: 85 ataaatctagatagatctatctat---------------catcaatatgaatgtgggaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||||||||||||||||||||||||||||||
Sbjct: 40 tgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||| ||||||| |||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 75 tctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 135 cggagggagta 145
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 92 attcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggag 151
||||||||||| |||||| ||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 152 gaagta 157
||||||
Sbjct: 109 gaagta 114
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaat 67
||||||||||||||||| |||||| | ||||||||||||| ||||||||||||||||||
Sbjct: 107 tccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatgaat 49
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 111 aatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 51 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatt 48
|||||| ||||||||||||||||| |||||| | ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 51
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 88 ctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaac 147
|||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 148 ggaggaagta 157
||||||||||
Sbjct: 134 ggaggaagta 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| ||||| | ||||||| ||||| ||||||||| |||||||||
Sbjct: 136 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatc 77
Query: 69 tag 71
|||
Sbjct: 76 tag 74
Score = 63.9 bits (32), Expect = 6e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 95 cattaacaccaatataaatgtgggaaatgcttga-atgacttacattgtgaaacggagga 153
||||| || |||||| ||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 9
Query: 154 agta 157
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattg 141
|||||| |||||||||||||| |||||| ||||||||||||| | |||||||||||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 142 tgaaacggag 151
||||||||||
Sbjct: 20 tgaaacggag 11
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc 71
Query: 69 ta 70
||
Sbjct: 72 ta 73
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 84 atgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtg 143
|||| |||||||||||||| |||||| ||||||||| ||||| |||||||||| ||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 144 aaacggaggaagta 157
||||||||||||||
Sbjct: 119 aaacggaggaagta 132
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 99 aacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||| ||||||| ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| |||||| | ||| ||| ||||| |||||||||||||||||||
Sbjct: 125 tccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatc 66
Query: 69 ta 70
||
Sbjct: 65 ta 64
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
|||||| ||||||||||||||||| |||||| | ||||| | ||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacat 139
|||| |||||||||||||||||| |||||| |||||| ||||| || |||||||||||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 140 tgtgaaacggaggaagta 157
| ||||||||||||||||
Sbjct: 22 tatgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| |||||| | ||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagtatttctcacattcatattgatgttaatgaatc 71
Query: 69 taga 72
||||
Sbjct: 72 taga 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 105 aatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||| |||||||| |||||||||||||| ||||| ||||| ||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 92 attcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggag 151
||||||||||| |||||| |||||| |||||||| |||||||||||||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 152 gaagta 157
||||||
Sbjct: 10 gaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||| ||| ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaat 67
||||||||||||||||| |||||| | |||||| ||||| |||||| |||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatgaat 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattc 32
||||||| ||||||||||||||||| ||||||
Sbjct: 131 atactccctccgtttcacaatgtaagtcattc 100
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||| ||| |||||| ||||||||| ||||| |||||||||||
Sbjct: 136 atactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtt 77
Query: 61 aatgaatctagata 74
||||||||||||||
Sbjct: 76 aatgaatctagata 63
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| ||||||||||||| | |||||||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 125 cggagggagta 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 98 taacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
||||||||||||| ||| |||||| | ||||| | ||||| ||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | ||||||||||||| ||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 62 atgaatctagata 74
|||||||||||||
Sbjct: 63 atgaatctagata 51
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| ||||| ||||||||| |||||||||||||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 113 cggagggagta 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 119 aaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| |||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 81 tatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacatt 140
|||||||||||||||||||||| | |||| |||||||| |||||| ||| ||||||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 141 gtgaaacggaggaagta 157
||||||||||||||||
Sbjct: 21 atgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| || ||| | |||| || ||||| |||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatc 71
Query: 69 taga 72
||||
Sbjct: 72 taga 75
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 89 tagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacg 148
|||||||||||||| |||||| ||||||| ||||||| |||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 149 gaggaagta 157
|||||||||
Sbjct: 13 gaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 93 ttcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggagg 152
|||||||||| |||||| |||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaaccgagg 144
Query: 153 aagta 157
||||
Sbjct: 145 gagta 149
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 89 tagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacg 148
|||||||||||||| | |||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 149 gaggaagta 157
|||| ||||
Sbjct: 13 gagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 62 atgaatcta 70
|||||||||
Sbjct: 65 atgaatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatat 53
|||||| ||||||||||||||||| |||||| | ||||||| ||||| ||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 94/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 50 atattgatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatat 109
|||| |||||||||||||||| ||| |||| | ||||||||||||||||||| | | ||
Sbjct: 110 atatagatgttaatgaatctaaata--tatacacatgtctagattcattaacaactaaat 53
Query: 110 aaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| |||||| ||| | |||||||||||||||||||||||||
Sbjct: 52 gaatgtgggtaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 120/149 (80%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| | ||| | |||| || ||||| || | | ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcattacccacattcatttagttgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | | ||||||| | ||||||||||||| | |||| || ||| |||||| ||
Sbjct: 72 tagacatgtgtatatattt--agattcattaacatctatatgtatatggacaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
| | |||||||||||||||||||| ||||
Sbjct: 130 aagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 89 tagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacg 148
|||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 149 gaggaagta 157
|||| ||||
Sbjct: 122 gagggagta 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| || |||||||||||||| |||||| | ||||||| ||||| ||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 62 atgaatcta 70
|||||||||
Sbjct: 70 atgaatcta 62
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 93 ttcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggagg 152
|||||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 153 aagta 157
|||||
Sbjct: 9 aagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaa 66
|||||||||||||| || |||||| | ||||||| ||||| |||||||||||||||||
Sbjct: 12 tccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatgaa 69
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 81 tatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacatt 140
|||||||||||||||||||||| |||||| ||||||| ||||| | |||||||||| |||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 141 gtgaaacggaggaagta 157
||||||||||||||||
Sbjct: 123 atgaaacggaggaagta 139
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||| ||| |||||| ||||||| | ||||| |||||||||||||||||||
Sbjct: 132 tccgtttcataatataagtcattctaacattttccacattcatattgatgttaatgaatc 73
Query: 69 taga 72
||||
Sbjct: 72 taga 69
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 98 taacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| ||| ||||||||| ||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 64 taacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 81 tatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacatt 140
|||||||||||||||||| ||| ||||| |||||| |||||||| ||||||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 141 gtgaaacggagg 152
||||||||||||
Sbjct: 122 gtgaaacggagg 133
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggagg 152
|||||| |||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 58 caatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | |||||| ||||| ||||| |||| ||||||||
Sbjct: 131 tccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaatc 72
Query: 69 taga 72
||||
Sbjct: 71 taga 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgt 59
||||||||||||||||| |||||| | |||||| ||||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattg 141
|||||| |||||||||||||| |||||| ||||||| ||||||| |||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 142 tgaaacggaggaagta 157
||||||||||| ||||
Sbjct: 125 tgaaacggagggagta 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 96 attaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaag 155
||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 156 ta 157
||
Sbjct: 6 ta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||| ||| |||||| | ||||| | ||||| ||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 62 atgaatcta 70
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 78 atatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttac 137
||||||||||||||||||||||||| | |||| |||||| | |||||| |||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 138 attgtgaaacggaggaagta 157
||| ||||| ||||||||||
Sbjct: 113 attatgaaatggaggaagta 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 120 aatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| |||||||||||||| ||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 13 tttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatctaga 72
||||| ||||||| |||||| | |||| | ||||| |||| ||||||||||||||||||
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatctaga 62
Query: 73 tagatatat 81
| ||||||
Sbjct: 61 catatatat 53
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 94 tcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggagga 153
||||||||| | |||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 154 agta 157
||||
Sbjct: 127 agta 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 97 ttaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagt 156
|||||| | |||| ||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 157 a 157
|
Sbjct: 5 a 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 62 a 62
|
Sbjct: 65 a 65
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatga 65
||||||||||||||||| |||||| | ||||||| ||||| |||| |||||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatga 67
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 91 gattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacgga 150
||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 151 ggaagta 157
|| ||||
Sbjct: 11 gggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 91 gattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacgga 150
||||||||| || |||||| ||||||||||||||| |||||||||||||| |||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 151 ggaagta 157
|| ||||
Sbjct: 132 gggagta 138
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| ||||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 62 atgaatc 68
|||||||
Sbjct: 65 atgaatc 71
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||| ||| ||||| | |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||||| |||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 62 atgaatctagatagatat 79
|| ||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 83 caatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
||||||||||||| ||| |||||| | ||||||| ||||| ||||||||
Sbjct: 129 tccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| ||||||| | ||| ||||||| ||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 147 cggaggaagta 157
|||||||||||
Sbjct: 120 cggaggaagta 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| | ||||| || | ||||||||||||||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatgaatc 64
Query: 69 tagatagatat 79
|||||||||||
Sbjct: 63 tagatagatat 53
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||| ||||| || |||||||||||||||| ||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 98/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| |||||||||||||||||| | | |||||| | |||||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatctagacacacatatattt--ctagattcattaacat 104
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
| |||| |||||||| |||||| ||| | |||||||| ||||||||||||||||
Sbjct: 105 ctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/149 (82%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| | ||| | |||| || ||||| |||| ||||||||||||||
Sbjct: 151 tccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatc 92
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | ||||| | |||||||||||||||||| | |||| |||||| | |||||| |
Sbjct: 91 tagaaa--tatatgtgtgtctagattcattaacatctatatgaatgtgaggaatgctaaa 34
Query: 129 atgacttacattgtgaaacggaggaagta 157
| | |||||||| ||||||||||| ||||
Sbjct: 33 aagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 95 cattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaa 154
|||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 155 gta 157
|||
Sbjct: 7 gta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatg 64
||||||||||||||||| |||||| | |||||| ||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgttaatg 67
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 120 aatgcttgaatgacttacattgtgaaacgga 150
|||||| ||||||||||||||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacgga 94
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 79 tatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttaca 138
|||| ||||||||||| ||||||| |||||| ||| ||||||||||| |||||||| ||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 139 ttgtgaaacggaggaagta 157
|||||||||||||||||||
Sbjct: 118 ttgtgaaacggaggaagta 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 111 aatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||||||| || |||| ||||||||||||||||||||||||||
Sbjct: 51 aatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
|||||||||||||| || ||||| | ||||||| | ||| |||||||||||||| ||||
Sbjct: 129 tccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaatc 70
Query: 69 taga 72
||||
Sbjct: 69 taga 66
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 98/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| |||||||||||||||||| | | |||||| | |||||||||||||||
Sbjct: 116 acattcatatagatgttaatgaatctagacacacatatattt--ctagattcattaacat 59
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
| |||| |||||||| |||||| ||| | |||||||| ||||||||||||||||
Sbjct: 58 ctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/149 (82%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| | ||| | |||| || ||||| |||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | ||||| | |||||||||||||||||| | |||| |||||| | |||||| |
Sbjct: 72 tagaaa--tatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctaaa 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
| | |||||||| ||||||||||| ||||
Sbjct: 130 aagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||| | |||||| |||||| |||||||| ||||||||||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 95 cattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaa 154
|||| ||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaa 139
Query: 155 gta 157
|||
Sbjct: 140 gta 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | |||||| ||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 62 atgaatctagata 74
|||||||||||||
Sbjct: 65 atgaatctagata 77
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 89/103 (86%), Gaps = 4/103 (3%)
Strand = Plus / Minus
Query: 55 gatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatataaatg 114
|||||||||||||||||| | ||| | |||||||||||||||||| | |||| ||||
Sbjct: 103 gatgttaatgaatctagaca----tatgtgtgtctagattcattaacatctatatgaatg 48
Query: 115 tgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||| ||| |||||||||| ||||||||||||||||
Sbjct: 47 tgggcaatgctagaaagacttacattatgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 78/94 (82%), Gaps = 4/94 (4%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| || ||| | |||| || ||||| |||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaaca 102
|||| | | |||||||||||||||||||||
Sbjct: 72 ----tagacacacatatgtctagattcattaaca 101
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 58 caatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
||||||||||||| || ||||| ||||||||||||||| |||||||||| |||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 122 cggagggagta 132
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||| ||| |||||| | ||||||| ||||| ||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 62 atgaatctagata 74
|||||||||||||
Sbjct: 72 atgaatctagata 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
||||||||||||||||| |||||| | ||||||| ||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 92 attcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggag 151
||||||||| | |||||| ||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 152 gaagta 157
||||||
Sbjct: 121 gaagta 126
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 114 gtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 48 gtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaat 67
||||||||||||||||| |||||| | ||||||| ||||| |||||||| |||||||||
Sbjct: 119 tccgtttcacaatgtaagtcattctagcatttccaacattcatattgatattaatgaat 61
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcc 42
|||||| ||||||||||||||||| |||||| | |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcc 45
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/149 (83%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| |||||| | | || || | || |||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagccttacccatatgcatatagatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||||| || | |||||| ||||||||||| || | |||| |||||||| |||||| |
Sbjct: 72 tagata--tagacatatgtttagattcattaccatctatatgaatgtgggcaatgctaaa 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||| ||||||||||| ||||
Sbjct: 130 atgacttacattatgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| ||||| | |||| || ||||| |||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||| | | || | ||||| ||||||||||||||| | |||| || |||| ||
Sbjct: 98 atgaatctaaacatatgtctatat--ctagattcattaacatctatatgcatatgggtaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
||| |||||||||||||| ||||||||||||||||
Sbjct: 40 ggctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 92 attcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggag 151
||||||||||| |||||| ||| ||| ||||||| |||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 152 gaagta 157
||||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaat 67
||||||||||||||||| |||||| | ||||| | | ||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat 70
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggag 151
|||||| ||| ||| ||||||| |||||||||||||| ||||||||||
Sbjct: 76 caatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 79 caatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
||||||||||||| || ||||| ||||||||||||||| |||||||||| |||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||| ||| |||||| | ||||||| ||||| ||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 62 atgaatctagata 74
|||||||||||||
Sbjct: 65 atgaatctagata 77
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
||||||||||||||||| |||||| | ||||||| ||||| ||||||||
Sbjct: 125 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 130/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| | ||| | ||| || || | |||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtt 100
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||||||| ||| ||| |||| ||||||||||||||||| | | || ||| |||| |
Sbjct: 99 aatgaatctaaatacatacatat--gtctagattcattaacatctaaatgaatatgggca 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| ||| | |||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 120/149 (80%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| | ||| | |||| || | ||| || | ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | || ||| ||| | ||||||||||||| | |||| | ||||| ||| || ||
Sbjct: 72 tagacatatgtatgtattt--agattcattaacatccatatgtacgtgggcaatactaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
| | |||||||||||||||||||| ||||
Sbjct: 130 aagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 76 atatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
||||| ||||||||||||| ||||||| | |||| |||||||| |||||| ||| | |||
Sbjct: 53 atatagatatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtctt 112
Query: 136 acattgtgaaacggaggaagta 157
||||||||||||||||||||||
Sbjct: 113 acattgtgaaacggaggaagta 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| | ||| | |||| || ||||| |||| ||||||||| ||||
Sbjct: 127 tccgtttcacaatgtaagactttctagcattgcccacattcatatagatgttaataaatc 68
Query: 69 taga 72
||||
Sbjct: 67 taga 64
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 76 atatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
|||||||| | ||||||||||||| || |||||||||| || ||||| || |||||||||
Sbjct: 86 atatatatctatctagattcattatcatcaatataaatatgagaaatactagaatgactt 27
Query: 136 acattgtgaaacggaggaagta 157
| ||||||||||||||||||||
Sbjct: 26 atattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| |||||| | ||||| | ||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagtatttctcatatttatattgatgataatgaatc 71
Query: 69 tagatagatatatat 83
|||||||||||||||
Sbjct: 72 tagatagatatatat 86
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 118 gaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| ||||||||||||| ||||||||||| ||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 92 attcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggag 151
||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 152 gaagta 157
||||||
Sbjct: 126 gaagta 131
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaat 67
||||||||||||||||| |||||| | ||||| || |||||||||||||||||||||
Sbjct: 124 tccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaatgaat 66
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 119 aaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| ||||||||||||||||||||||||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcatt 31
|||||| ||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 84 atgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtg 143
|||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 144 aaacggaggaagta 157
|||||||| ||||
Sbjct: 18 gaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 79 caatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| |||||| |||||||||| ||||| | ||||||| | ||||||||||||| |
Sbjct: 4 atactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgct 63
Query: 61 aatgaatctaga 72
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgt 59
||||||||||||||||| ||||| | ||||||| ||||| ||||||||||
Sbjct: 125 tccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/156 (80%), Gaps = 14/156 (8%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| ||||| | ||||| ||||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||| |||| ||||||||||||| || |||||| |||||| |||
Sbjct: 86 atgaatttaga--------------tctagattcattagcatcaatatgaatgtgaaaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||| ||||||||||||||||||||| ||||
Sbjct: 40 tgctagaataacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||| |||||||| || |||||||||||| | ||||||| ||||| |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaa 135
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 136 cggagggagta 146
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 89 tagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacg 148
|||||||||||||| |||||||| ||||| ||||||| |||| |||||||||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 149 gaggaagta 157
|||| ||||
Sbjct: 13 gagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| | |||| | ||||| | ||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 62 atgaatctagatagatata 80
||||||||| |||||||||
Sbjct: 65 atgaatctatatagatata 83
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||| ||||
Sbjct: 98 atgacttacattgtgaaacggagggagta 126
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/156 (80%), Gaps = 14/156 (8%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| ||||| | ||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| |||||||||||||||| |||||| ||| | | |||
Sbjct: 65 atgaatctaga--------------tctagattcattaacatcaatatgaatatagtaaa 110
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||| |||||| |||||||||||||
Sbjct: 111 tgctagaatgacttatattgtggaacggaggaagta 146
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| ||||||||||||| | ||||||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| |||||| |||||| ||| |||||| |||||||| | ||| ||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||| | | |||||| ||| ||| |||||||| || |||||| ||| ||| |||
Sbjct: 98 atgaatctaaacatatatatctat--ctaaattcattagcatcaatatgaatatggaaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
| || |||||||||| | |||| |||||||||||||
Sbjct: 40 tactagaatgacttatactgtggaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 93/108 (86%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 50 atattgatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatat 109
||||||||| |||||||| ||||||||||||||| || ||||||||||| || ||||||
Sbjct: 53 atattgatgctaatgaatttagatagatatatat--gtttagattcattagcatcaatat 110
Query: 110 aaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||| || |||||| | |||||||||| |||||| |||||||| ||||
Sbjct: 111 gaatatgagaaatgttagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 89 tagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacg 148
|||||| ||||||| |||||||| ||||| ||||||| ||||||||||||||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 149 gaggaagta 157
|||| ||||
Sbjct: 131 gagggagta 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||| | ||| ||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 62 atgaatctagatagata 78
|| |||||| |||||||
Sbjct: 79 ataaatctatatagata 63
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| |||| ||||||| ||||||||||||||||||| ||||| ||||
Sbjct: 58 caatataattgtgaaaaatgctaaaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/156 (80%), Gaps = 14/156 (8%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| ||||| | ||||||| ||||| ||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| |||||||||||||||| |||||| ||| | | |||
Sbjct: 86 atgaatctaga--------------tctagattcattaacatcaatatgaatatagtaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||| |||||| |||||||||||||
Sbjct: 40 tgctagaatgacttatattgtggaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| ||||||||||||| | ||||||||||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 136 cggagggagta 146
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| | ||| | |||| || |||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||| ||| ||||| | |||||||||||||| || | || | |||||||| ||
Sbjct: 98 atgaatctatatacttatatgt--gtctagattcattagcatctatgtgaatgtgggcaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||| | |||||||| ||||||||||||||||
Sbjct: 40 tgctagaaagtcttacattatgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 121/149 (81%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| | ||| | |||| || ||||| | || |||| |||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcccacattcacatagatgctaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|||| | ||||| ||| | ||||||||||||| | |||| |||| ||| |||||| ||
Sbjct: 72 tagacacatataagtatat--agattcattaacatctatatgaatgcgggcaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
| | |||||||||||||||||||| ||||
Sbjct: 130 aagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/156 (80%), Gaps = 14/156 (8%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||| ||||||| ||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||| |||| ||||||||||||| || |||||||||| || |||
Sbjct: 86 atgaatttaga--------------tctagattcattagcatcaatataaatatgaaaaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
| || |||||||||||||||||||||||||| ||||
Sbjct: 40 tactagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||| |||||||| || |||||| ||||| | ||||||| |||||| |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 136 cggagggagta 146
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 93 ttcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggagg 152
|||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 153 aagta 157
||||
Sbjct: 117 gagta 121
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 105 aatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||| ||| |||||| | ||||||| ||||||||| |||||||
Sbjct: 122 atactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtt 63
Query: 61 aatgaa 66
||||||
Sbjct: 62 aatgaa 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatatt 54
||||||||||||||||| ||||| | ||||||| ||||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtga 144
|||||||||||||||||| |||||| |||||| ||||| || |||||||||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 145 aacggaggaagta 157
|||||||| ||||
Sbjct: 135 aacggagggagta 147
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| ||||| | ||||| ||||| ||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 87 atgaatctaga 77
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 96 attaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaag 155
||||||| ||||||||||||| |||| || |||||||||||||||||||| |||| ||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaacagagggag 7
Query: 156 ta 157
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||| ||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 62 atgaatctagata 74
|||||||||||||
Sbjct: 65 atgaatctagata 77
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| ||| | | ||||||| ||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 96 attaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaag 155
||||||| |||||| ||||| |||||| | |||||||||| ||||||||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 156 ta 157
||
Sbjct: 137 ta 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaat 63
||||||||||||| ||| |||||| | |||||||||||| ||||||||||||||
Sbjct: 131 tccgtttcacaatataagtcattctactatttcctacattcatattgatgttaat 77
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 90 agattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacgg 149
|||||||||| || |||||| |||||| |||||||| |||||||||| ||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 150 aggaagta 157
||||||||
Sbjct: 128 aggaagta 135
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 94 tcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggagga 153
|||||| || |||||| |||||| |||||||| ||||||||||||| ||||||| ||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 154 agta 157
||||
Sbjct: 8 agta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| |||||| | |||||| ||||| ||||||||| |||||||||
Sbjct: 128 tccgtttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaatc 69
Query: 69 t 69
|
Sbjct: 68 t 68
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 78 atatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttac 137
||||||||||||||||||||||||| | | || ||||||| |||||| ||| | |||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 138 attgtgaaacggaggaagta 157
||||||||||||||||||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 90 agattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacgg 149
||||||||||| | |||| | ||||||||||||||| |||||||||| ||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 150 aggaagta 157
||||||||
Sbjct: 128 aggaagta 135
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 94 tcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggagga 153
||||||| | |||| | |||||| |||||||| |||||||||| |||||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 154 agta 157
||||
Sbjct: 8 agta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| |||||| | ||||||| ||||| | |||||| ||||||||||
Sbjct: 128 tccgtttcacaatataagtcattctagcatttcccacattcacattgatattaatgaatc 69
Query: 69 t 69
|
Sbjct: 68 t 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||| ||| |||||| | |||||| ||||| | |||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 62 atga 65
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 107 tataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 99 tataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacgg 149
|||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatat 53
||||||| ||||||||||||||||| |||||| | ||||||| ||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttata 52
||||||| ||||||||||||||||| |||||| | ||||||| |||||||||
Sbjct: 150 atactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 10 ccgtttcacaatgtaactcattcaaacatttcctacatttatat 53
|||||||||||||||| |||||| | ||||||| ||||||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcat-tcaaacatttcctacatttatattgatgtt 60
|||||| ||||||||||||||||| || || ||||||||| ||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 61 aatgaatctagatagatat 79
|||||||||||||||||||
Sbjct: 65 aatgaatctagatagatat 83
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 84 caatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttga-atgacttacattgtgaa 145
|||||||||||||||| |||||| ||||||||||||| | || |||||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 146 acggaggaagta 157
||||||| ||||
Sbjct: 16 acggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
||||||||||||||||| |||||| | ||||||| | ||| ||||||||
Sbjct: 130 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||| ||||||||||| |||||| ||| ||| ||||| | ||||||||||||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 147 cggaggaagta 157
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| |||||| ||||||| | | ||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacattttccatattcatattgatgttaatgaatg 71
Query: 69 tagatag 75
|||||||
Sbjct: 72 tagatag 78
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 128 aatgacttacattgtgaaacggaggaagta 157
||||||||||||| ||||||||||| ||||
Sbjct: 107 aatgacttacattatgaaacggagggagta 136
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 128/156 (82%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| | ||| | |||| |||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|||||||||| || ||| |||||||||||||||||| |||| ||||||| ||
Sbjct: 65 atgaatctaggta----tatgcgtgtctagattcattaacatttatatgaatgtggacaa 120
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||| | |||||||| ||||||||||||||||
Sbjct: 121 tgctagaaagtcttacattatgaaacggaggaagta 156
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 88 ctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaac 147
||||||||||||||| |||||| ||| | || |||||| ||| | |||||||| ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaac 15
Query: 148 ggaggaagta 157
||||| ||||
Sbjct: 14 ggagggagta 5
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||| ||| ||||| | |||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 83 caatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| |||||| | ||||| | |||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 62 atgaatctagatagatat 79
|| ||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
||||||||||||| ||| |||||| | ||||||| ||||| ||||||||
Sbjct: 129 tccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 78 atatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttac 137
|||||||||||||||||||||| || |||||| ||| || ||||||| |||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 138 attgtgaaacggaggaagt 156
|||||||||||||||||||
Sbjct: 113 attgtgaaacggaggaagt 131
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||| |||||||||| ||||||||||||||||||||| ||| |||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaacagagaaagta 5
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 111 aatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 49 aatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 118 gaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| ||||||||||||||||||||| |||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatt 48
||||||||||||||||| |||||| | ||||||| |||||
Sbjct: 88 tccgtttcacaatgtaagtcattctagcatttcccacatt 49
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacat 139
||||||||| ||||||||||||| | |||| |||||||| |||||| |||||||||| ||
Sbjct: 82 atatatgtccagattcattaacatctatatgaatgtgggcaatgctagaatgacttatat 23
Query: 140 tgtgaaacggaggaa 154
| |||||||||||||
Sbjct: 22 tatgaaacggaggaa 8
Score = 71.9 bits (36), Expect = 2e-12
Identities = 121/149 (81%), Gaps = 4/149 (2%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||| ||| |||||| | |||| || ||||| |||| ||||||||||||||
Sbjct: 12 tccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
| || | ||||| || |||||||||||| | | ||| |||||||| ||| || ||
Sbjct: 72 tggaca----tatatgtggctagattcattagtatctataagaatgtgggcaatcctaga 127
Query: 129 atgacttacattgtgaaacggaggaagta 157
|||||||| ||||||||||||||| ||||
Sbjct: 128 atgacttatattgtgaaacggagggagta 156
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| ||||| ||| ||| ||||||| ||| ||||||||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 147 cggaggaagta 157
|||||||||||
Sbjct: 124 cggaggaagta 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| || ||| | ||||| | | ||| ||||| |||||||||||||
Sbjct: 127 tccgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaatgaatc 68
Query: 69 tagatagatatatat 83
||||| ||||||||
Sbjct: 67 tagatgaatatatat 53
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||||||| ||||| | |||||||||||||| ||||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 129/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| | ||| | |||| || | ||| || | |||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgct 100
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||||||||| | ||| ||| ||| |||||||||||||| |||| ||||||| |
Sbjct: 99 aatgaatctagaca--tatgtatgtgtttagattcattaacatttatatgtatgtgggca 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| ||| | |||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 121/149 (81%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| | ||| | |||| || |||| |||| |||||||||||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcattgcccacatacatataaatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
|| | | ||| |||| |||||||||||||| || | | || ||| |||| |||||| ||
Sbjct: 72 taaacacatacatat--gtctagattcattagcatctaaatgaatttgggcaatgctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
| | |||||||||||||||||||| ||||
Sbjct: 130 aagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||| |||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 58 caatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattga 56
|||||| ||||||||||||||||| |||||| | ||||||| || ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 120 aatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| |||||||||| ||||||||||||| ||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaagaagta 104
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| |||||||||| |||||| ||| || ||||||| | ||||| ||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 62 atgaatctagatagatat 79
||||||||||||| ||||
Sbjct: 70 atgaatctagatatatat 53
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacat 139
|||||| |||||||||||||||| |||||| ||||||| ||||| | || ||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 140 tgtgaaacggaggaagta 157
|||||||||||| ||||
Sbjct: 113 ggtgaaacggagggagta 130
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacat 139
||||||||||||||||||||||| | |||| |||||||| ||| || ||| | |||||||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacat 140
Query: 140 tgtgaaacggaggaagta 157
||||||||||||| ||||
Sbjct: 141 tgtgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 127/156 (81%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| | ||| | ||| || ||||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | ||||| |||||| ||||||||||| | |||| ||| |||| |
Sbjct: 98 atgaatctagaca--tatatgcgtgtctaaattcattaacatctatatgaatatgggcag 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
| || ||| | |||||||||||||||||||| ||||
Sbjct: 40 tactagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 83.8 bits (42), Expect = 7e-16
Identities = 93/109 (85%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 49 tatattgatgttaatgaatctagatagatatatatatgtctagattcattaacaccaata 108
||||| |||||||||||||||||| | ||| |||||| ||||||||||||| | | | |
Sbjct: 50 tatatagatgttaatgaatctagaaacatacatatat--ctagattcattaatatctaaa 107
Query: 109 taaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||| |||||| || | |||||||||||||||||||||||||
Sbjct: 108 taaatgtggacaatgctaaaaagtcttacattgtgaaacggaggaagta 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 94/114 (82%), Gaps = 4/114 (3%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
|||||||| | ||| ||||||||||||||| |||| ||| | ||||||||||||||||
Sbjct: 114 acatttatttagatattaatgaatctagat--atatgtatgtttctagattcattaacat 57
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
| |||| |||||| |||| | ||| | |||||||| ||||||||||| ||||
Sbjct: 56 c--tatatatgtggacaatggtagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| |||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 58 caatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgt 59
||||||||||||||||| |||||| | |||||| ||||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| || ||||||||||||||||||||||| ||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagta 111
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 61 caatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 60.0 bits (30), Expect = 9e-09
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||| ||||||| |||||||||| ||||||||||||||| ||||
Sbjct: 57 caatatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
||||||| ||||||||||||| ||| |||||| | ||||||| ||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctagcatttcc-acattcatattgat 59
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattga 56
||||||||||||| ||| |||||| | ||||||| ||||| |||||||
Sbjct: 107 tccgtttcacaatataagtcattctagcatttcccacattcatattga 60
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 92/108 (85%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 50 atattgatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatat 109
|||| |||||||||||| ||||||| |||| ||||||||||||||||||||| | ||||
Sbjct: 53 atatagatgttaatgaacctagata--tatacatatgtctagattcattaacatctatat 110
Query: 110 aaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| ||| || || | |||||||||||||||||||| ||||
Sbjct: 111 gaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 94/114 (82%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| |||||||||||||||||| | || ||||||| |||| ||||||||||
Sbjct: 116 acattcatatagatgttaatgaatctagacatatgtatatat--ctaggttcattaacat 59
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
| |||| ||| |||| ||| || ||| | |||| ||| ||||||||||| ||||
Sbjct: 58 ctatatgaatatgggcaatactagaaagtcttatattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 105 aatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||| ||||||| |||||||||| ||||||||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 89 tagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacg 148
|||||||||||| | |||||| ||| || |||||||| |||||||||||||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 149 gaggaagta 157
|||| ||||
Sbjct: 118 gagggagta 126
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | |||||| | ||| |||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 62 atgaatcta 70
|||||||||
Sbjct: 66 atgaatcta 58
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatatt 54
||||||||||||| ||| |||||| | ||||| | |||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 105 aatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| ||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacgga 150
|||||| ||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 58 caatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatg 58
|||| ||||||||||||||| ||| |||||| | ||||||| | ||| |||||||||
Sbjct: 5 tactacatccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatatt 54
||||||||||||| ||| |||||| | ||||||| ||||| |||||
Sbjct: 112 tccgtttcacaatataagtcattctagcatttcccacattcatatt 67
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 130/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| | ||| |||||| || ||||| |||| |||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgct 100
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
|||||||||||| | ||| ||||| | |||||| |||| || | |||| |||||||| |
Sbjct: 99 aatgaatctagaca-ttat-tatatatatagatttattagcatctatatgaatgtgggta 42
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| || | |||||||| ||||||||||||||||
Sbjct: 41 atgctataaagtcttacattatgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 84 atgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtg 143
|||||||||||||||| || | |||| |||||||| |||| | ||| | |||||||||||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtg 144
Query: 144 aaacggaggaagta 157
||||||||| ||||
Sbjct: 145 aaacggagggagta 158
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 92/108 (85%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 50 atattgatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatat 109
|||| |||||||||||| ||||||| |||| ||||||||||||||||||||| | ||||
Sbjct: 110 atatagatgttaatgaacctagata--tatacatatgtctagattcattaacatctatat 53
Query: 110 aaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| ||| || || | |||||||||||||||||||| ||||
Sbjct: 52 gaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 94/114 (82%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| ||||||||||||||||| | |||| ||||| ||||| ||||||||||
Sbjct: 47 acattcatatagatgttaatgaatctag--acatatgtatatatctaggttcattaacat 104
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
| |||| ||| |||| ||| || ||| | |||| ||| ||||||||||| ||||
Sbjct: 105 ctatatgaatatgggcaatactagaaagtcttatattatgaaacggagggagta 158
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 128/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| | ||| |||||| |||| | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | ||||||| ||| |||||||||||||| | | || |||||||| ||
Sbjct: 98 atgaatctagaca--tatatatgtgtttagattcattaacatctaaatgaatgtgggtaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||| | ||| |||| ||||||||||||||||
Sbjct: 40 tgctagaaagtcttgcattatgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 atatatatgtctagattcattaaca 102
|||||||||||||||||||||||||
Sbjct: 79 atatatatgtctagattcattaaca 103
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 89 tagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacg 148
|||||||||||||| |||||| ||||||| |||| || ||||||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 149 gaggaagta 157
|||||||||
Sbjct: 122 gaggaagta 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 128 aatgacttacattgtgaaacggaggaagta 157
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| ||||| | |||| | ||||| |||||||||||||||||||
Sbjct: 123 tccgtttcacaatataagtcattttagtattttccacattcatattgatgttaatgaatc 64
Query: 69 ta 70
||
Sbjct: 63 ta 62
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcatt 31
||||||| ||||||||||||||||| |||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 57 atataattgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 111 aatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 51 aatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcatt 31
|||||| ||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 86 gtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaa 145
|||||||||||||| || |||||| ||| |||||||| || |||||||||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 146 acggaggaagta 157
||||||| ||||
Sbjct: 125 acggagggagta 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| | |||||| | ||| ||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 76 atgaatctaga 66
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||| || ||||| || |||| ||||||||||||||||||||||||||
Sbjct: 58 caatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 94 tcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggagga 153
||||| ||| ||||||||||||| |||||||| |||||||||| ||||| ||||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 154 agta 157
||||
Sbjct: 90 agta 93
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatga 65
||||||| ||||| ||| |||||| | |||||| |||||||||||||||| |||||
Sbjct: 86 tccgttttacaatataagtcattctagcatttctcacatttatattgatgtaaatga 30
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 78 atatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttac 137
|||||||| |||||||| ||||||| || ||| |||||||||||| || |||||||||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 138 attgtgaaacggaggaagta 157
||| |||||| |||| ||||
Sbjct: 125 attatgaaacagagggagta 144
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 96 attaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaag 155
||||||| || ||| |||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 156 ta 157
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 94 tcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggagga 153
||||||||| |||||| ||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 154 agta 157
||||
Sbjct: 8 agta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| ||||| | ||||| | ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 62 atga 65
||||
Sbjct: 65 atga 68
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 98 taacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||| ||||||| ||||||| ||| | ||||||||||||||||||| ||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| | ||| | ||||| | ||||| ||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 107 tataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||| ||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 39 tataaatgtaggaaatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttata 52
||||||||||||||||| |||||| | |||||||||||||||||
Sbjct: 82 tccgtttcacaatgtaagtcattctagcatttcctacatttata 39
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 127 gaatgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| | ||| ||||||| |||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 147 cggaggaagta 157
|||||||||||
Sbjct: 120 cggaggaagta 130
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||||||| || ||||||||||||||| ||||||||| ||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||||||| ||||| | ||||| || | |||||||||||||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaatgaatc 64
Query: 69 tagatagatata 80
||||||||||||
Sbjct: 63 tagatagatata 52
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 96/114 (84%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| ||||||||||||||| | | | | |||||||||||||||||||||||
Sbjct: 116 acattcatatagatgttaatgaatct--aaacacacatatatgtctagattcattaacat 59
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
| |||| ||||| | |||||| ||| | |||||||| ||||||||||||||||
Sbjct: 58 ctatatgaatgtagacaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 121/149 (81%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| | ||| | |||| ||||||| |||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgtctacattcatatagatgttaatgaatc 71
Query: 69 tagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttga 128
||| | |||||| | ||| |||||||||||||| | |||| ||||||| || || ||
Sbjct: 72 tag--acatatatgtgtgtttagattcattaacatctatatgaatgtggacaaacctaga 129
Query: 129 atgacttacattgtgaaacggaggaagta 157
| | |||||||| ||||||||||| ||||
Sbjct: 130 aagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 99 aacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||| ||| ||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 84 atgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtg 143
|||| ||||||||| |||| |||||| ||||||| ||||||| |||| ||||||||||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 144 aaacggaggaagta 157
||||||||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| | |||| | ||||| | ||||| |||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt 63
Query: 61 aatgaatcta 70
|||||||||
Sbjct: 64 -atgaatcta 72
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||||||||||||| |||||| | ||||| | | ||| |||||||||||
Sbjct: 124 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 83 tatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgt 142
||||| || ||| ||||||| |||||| ||||||| |||| || |||||||||||||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 143 gaaacggaggaagta 157
|||||||||||||||
Sbjct: 19 gaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaat 63
||||||||||||||||| ||||| | |||| | ||||| ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagtattttccacattcatattgatgttaat 66
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 128 aatgacttacattgtgaaacggaggaagta 157
|||| |||||||||||||||||||| ||||
Sbjct: 81 aatggcttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| |||||| |||||| ||||| | ||||| |||||||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 147 cggaggaagta 157
|||||||||||
Sbjct: 120 cggaggaagta 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| ||||||||||||||| |||||||||| ||||||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||| ||||||| ||||| | ||||| ||||| |||||||||||||||||||
Sbjct: 123 tccgtttcataatgtaagccattctatcatttttcacattcatattgatgttaatgaatc 64
Query: 69 tagatagatat 79
|||||||||||
Sbjct: 63 tagatagatat 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatat 53
|||||| ||||||||||||| ||| |||||| | ||||||| ||||| ||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 112 atgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacat 47
|||||| ||||||||||||||||| |||||| | ||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 120 aatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| |||||| ||||||||||||||||||| ||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattc 32
||||||| ||||||||||||||||| ||||||
Sbjct: 96 atactccctccgtttcacaatgtaaatcattc 65
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| || |||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 58 caatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatg 58
|||||| ||||||||||||||||| |||||| | ||||||| || || |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 113 tgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||| |||||| ||||||||| ||||||||| ||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagggagta 107
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacat 139
||||||||||||||||||||||| | |||| ||| |||| ||| || ||| | |||||||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacat 140
Query: 140 tgtgaaacggaggaagta 157
||||||||||||| ||||
Sbjct: 141 tgtgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 125/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| | ||| | ||| || | ||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
||||||||||| | ||||| |||||| ||||||||||| | |||| ||| |||| |
Sbjct: 98 atgaatctagaca--tatatgcgtgtctaaattcattaacatctatatgaatatgggcag 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
| || ||| | ||||||| |||||||||||| ||||
Sbjct: 40 tactagaaagtcttacatggtgaaacggagggagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 92 attcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggag 151
||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 152 gaagta 157
||||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 119 aaatgcttgaatgacttacattgtgaaacggagg 152
||||||| ||||||||||||||||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggagg 107
Score = 54.0 bits (27), Expect = 6e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaat 67
||||||||||||||||| |||||| | ||||| | |||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttc-acatccatattgatgttaatgaat 69
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 112 atgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 127 gaatgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||||| ||||
Sbjct: 64 gaatgacttacattgtgaaacggagggagta 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattc 32
|||||| ||||||||||||||||| ||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattc 64
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 128/157 (81%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||| ||||||| |||||| | |||||| | ||| |||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtt 63
Query: 61 aatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaa 120
| |||||||| || | |||||||||||||||||| ||||| | | | |||||| ||
Sbjct: 64 agtgaatctaagta--tgtatatatgtctagattcactaacatccaagtgaatgtgaaaa 121
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| ||||||||||||| |||||| |||| ||||
Sbjct: 122 atgctacaatgacttacattatgaaacagagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 89 tagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacg 148
|||||||| ||||| | |||| ||| || |||||||| |||||||||||||| |||||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 149 gaggaagta 157
|||| ||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 75.8 bits (38), Expect = 2e-13
Identities = 95/114 (83%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| |||||||||||||||| | | | | |||||| | ||||||||||||||
Sbjct: 118 acattcatatagatgttaatgaatctatacacacacatatatatatagattcattaacat 59
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
| |||| |||||||| |||||| ||| | |||| | | ||||||||||||||||
Sbjct: 58 ctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 95/114 (83%)
Strand = Plus / Plus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| |||||||||||||||| ||| |||| | | ||| ||||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatctatatatatatgtgtgtgtatagattcattaacat 106
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
| |||| |||||||| |||||| ||| | |||| | | ||||||||||| ||||
Sbjct: 107 ctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 160
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||||||||||| |||||||||| ||||||||||||||| ||||
Sbjct: 58 caatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 51/55 (92%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtg-aaacggaggaagta 157
|||||| ||||||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct: 62 caatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagta 116
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
||||||| ||||||||||||| ||| |||||| | ||||||| ||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 97 ttaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagt 156
|||||| |||||||||| || |||||||| ||||||||||||||||||||||||| |||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 157 a 157
|
Sbjct: 5 a 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 97 ttaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagt 156
|||||| |||||||||| || |||||||| ||||||||| |||||||||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 157 a 157
|
Sbjct: 122 a 122
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| ||||| | |||||| | ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 62 a 62
|
Sbjct: 65 a 65
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaa 62
||||||||||||| ||| ||||| | |||||| | |||||||||||||||||
Sbjct: 115 tccgtttcacaatataagtcattttagcatttctcatatttatattgatgttaa 62
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgactta 136
|||||||||||||||||||| || |||||| |||||| |||||||| ||||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 92 attcattaacaccaatataaatgtgggaaatgcttgaatgacttacatt 140
|||||||| || |||||| |||||| |||||||| ||||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 27 tcattcaaacatttcctacatttatattgatgttaatgaatctaga 72
|||||| | |||||| ||||| ||||||||| |||||||||||||
Sbjct: 100 tcattctagcatttctcacattcatattgatgctaatgaatctaga 55
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 91/108 (84%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 50 atattgatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatat 109
|||| |||||||||||| ||| || | |||||||||||||||||||||| || | ||||
Sbjct: 53 atatagatgttaatgaaccta--tacacatatatatgtctagattcattagcatctatat 110
Query: 110 aaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| |||||| ||| | |||| | | ||||||||||||||||
Sbjct: 111 gaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 158
Score = 54.0 bits (27), Expect = 6e-07
Identities = 93/114 (81%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| |||| ||||||||||||| | ||||||| ||| ||| ||||||||||
Sbjct: 116 acattcatatagatgctaatgaatctagaca--tatatatgtgtataggttcattaacat 59
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
| |||| | |||||| |||||| ||| | |||| | | ||||||||||| ||||
Sbjct: 58 ctatatgattgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 81 tatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacatt 140
|||||||||||||||||||||| |||| ||| | ||||| || |||||||||| |||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 141 gtgaaacggaggaagta 157
|||||||||||||||||
Sbjct: 123 gtgaaacggaggaagta 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 111 aatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| |||| || |||||||||||||||||||||||||||||||
Sbjct: 51 aatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 105 aatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 128 aatgacttacattgtgaaacggaggaagta 157
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcatt 31
|||||| ||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 94 tcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggagga 153
||||||||| |||||| ||||||| || |||| ||||||||||||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 154 agta 157
||||
Sbjct: 8 agta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| |||||||||| |||| ||||||||||||||||||||| |||| ||||
Sbjct: 70 caatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
|||||| || |||||||||||||| |||||| | || |||| ||||| ||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 77 atatagatgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 81 tatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacatt 140
||||| |||||||||| ||| | ||||||||||| |||||| | |||||||||| |||
Sbjct: 81 tatatatctagattcactaatttccatataaatgtgagaaatgttagaatgacttatatt 22
Query: 141 gtgaaacggaggaagta 157
||||||| ||||||||
Sbjct: 21 atgaaacgaaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 11 cgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatcta 70
||||||| ||| ||| |||||| |||||||| |||||||||| || ||| ||||||||
Sbjct: 14 cgtttcataatataagtcattctaacatttctcacatttatatggaaattagtgaatcta 73
Query: 71 gata 74
||||
Sbjct: 74 gata 77
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattg 141
||||||||||||||||||||| | | || ||| |||| |||||| || | |||||||||
Sbjct: 83 atatgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattg 142
Query: 142 tgaaacggaggaagta 157
||||||||||||||||
Sbjct: 143 tgaaacggaggaagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 85/103 (82%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 55 gatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatataaatg 114
|||||||||||||||||| | ||| ||| ||| ||||||||||||| | |||| ||
Sbjct: 105 gatgttaatgaatctagaca--tatgtatgtgtttagattcattaacgtctatatgtata 48
Query: 115 tgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|| | |||||| ||| | |||||||||||||||||||| ||||
Sbjct: 47 tgagcaatgctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 118 gaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 118 gaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 98 taacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||| | ||||||||||||||| |||| ||||| ||||||||||||||| ||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||| ||| | |||| | ||||||| ||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 87/103 (84%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 55 gatgttaatgaatctagatagatatatatatgtctagattcattaacaccaatataaatg 114
|||||||||||||||| | | ||| |||||||||||||| ||||||| | | || |||
Sbjct: 58 gatgttaatgaatctaaaca--tatgtatatgtctagatttattaacatctaaatgtatg 115
Query: 115 tgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||| ||| | |||||||||||||||||||| ||||
Sbjct: 116 tgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 126/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| | ||| | |||| || |||| || | |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatataaatgtgggaaa 121
|| ||||||| | ||||| |||||| |||||||||||||| | | || |||| || ||
Sbjct: 98 ataaatctag--acatatacatatgtttagattcattaacatctaaatgaatggaggtaa 41
Query: 122 tgcttgaatgacttacattgtgaaacggaggaagta 157
| || || | |||||||||||||||||||||||||
Sbjct: 40 tactataaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattg 141
||||||||||||||||||||| | | || |||||||| || ||| || | |||||||||
Sbjct: 80 atatgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattg 21
Query: 142 tgaaacggaggaagta 157
||||||||||||||||
Sbjct: 20 tgaaacggaggaagta 5
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 83 tatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgt 142
|||||||||||| ||||||| | |||| ||||||| |||||| |||| ||||||||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 143 gaaacggaggaagta 157
|||||||||| ||||
Sbjct: 123 gaaacggagggagta 137
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 111 aatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| |||||| |||| ||||||||| ||||||||||||||||
Sbjct: 51 aatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 111 aatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 119 aaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| ||||||||| |||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattc 32
|||||| ||||||||||||||||| ||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattc 86
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
||||||||||||| || || ||| ||||||| ||||||| |||||||||| ||| |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 147 cggaggaagta 157
| |||||||||
Sbjct: 15 cagaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||||||||||| ||||||||||||| ||||||||||| ||||
Sbjct: 85 caatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatctag 71
|||||| ||| ||| |||||| | ||||| | ||||| ||| ||||| ||||||||||||
Sbjct: 15 gtttcataatataagtcattctagcattttccacattcatactgatgctaatgaatctag 74
Query: 72 atag 75
||||
Sbjct: 75 atag 78
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 111 aatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| || |||| |||||||||||||||||||||||||||||||
Sbjct: 51 aatgtggaaagtgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 27 tcattcaaacatttcctacatttatattgatgttaatgaatctagatagatatat 81
|||||| | ||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 120 tcattctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 78 atatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
|||||| | ||||||| |||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 69.9 bits (35), Expect = 1e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||| ||||||| |||| ||||||||||||||||||||| ||||
Sbjct: 72 caatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||| ||||||| |||| ||||||||||||||||||||| ||||
Sbjct: 58 caatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
||||||| ||||||||||||||||| | |||| | ||||| | ||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 50.1 bits (25), Expect = 9e-06
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
|||||| ||||||||||||||||| | |||| | ||||| | ||||| ||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/70 (88%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 56 atgttaatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgt 115
||||||||||||||||||| ||||||| || ||||||||||||||| | |||| |||||
Sbjct: 35 atgttaatgaatctagata--tatatatgtgcctagattcattaacatctatatgaatgt 92
Query: 116 gggaaatgct 125
||| ||||||
Sbjct: 93 gggcaatgct 102
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| ||||||||||||||||| | |||||||||| |||||||||||||||
Sbjct: 92 acattcatatagatgttaatgaatctaggcacatatatatat--ctagattcattaacat 35
Query: 104 caatataaatgtgggaaatgct 125
|||| |||||||| ||||||
Sbjct: 34 atatatgaatgtgggcaatgct 13
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 97/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 41 cctacatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaa 100
|||||||| || | ||||||||||||| |||| | ||| || ||| ||||||||||||
Sbjct: 44 cctacattcatttagatgttaatgaatatagaca--tatgtacgtgtttagattcattaa 101
Query: 101 caccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|| | |||| ||||| | |||||| ||| | |||||||||||||||||||||||||
Sbjct: 102 catctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||| |||| || ||||||||| |||||||||||||||||||||
Sbjct: 55 caatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 127 gaatgacttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||||| ||||
Sbjct: 35 gaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattc 32
|||||| ||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattc 35
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacat 139
|||| |||||||||||||||||| ||| ||||| || ||||||| ||||||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 140 tgtgaaacggaggaagta 157
||||||||||| ||||||
Sbjct: 22 tgtgaaacggaagaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| ||||| | ||||| | ||||| ||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatc 71
Query: 69 tagatagatat 79
|||| ||||||
Sbjct: 72 tagacagatat 82
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacat 139
|||||||||||||||||||| | | ||||||||||||| || ||| ||| | |||||||
Sbjct: 82 atatatgtctagattcattagtatctatataaatgtgggcaacgctagaaagtcttacat 23
Query: 140 tgtgaaacggaggaagta 157
| |||||| |||||||||
Sbjct: 22 tatgaaacagaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 94/114 (82%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
|||||||||| ||| ||||||||||||| | ||||| | || |||||||||||| ||
Sbjct: 47 acatttatatagatactaatgaatctagaca--tatatgtgtgcctagattcattagcat 104
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||| |||||| ||| | |||||||| ||||||||||| ||||
Sbjct: 105 atatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||| ||||||| |||| ||||||||||||||||||||| ||||
Sbjct: 58 caatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||||||| ||||||| |||| ||||||||||||||||||||| ||||
Sbjct: 72 caatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
||||||| ||||||||||||||||| | |||| | ||||| | ||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgat 57
|||||| ||||||||||||||||| | |||| | ||||| | ||||| ||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 67.9 bits (34), Expect = 4e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 72 atagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatg 131
|||||| ||| | |||||||||| ||||||| | |||| ||||||| |||||| ||| |
Sbjct: 55 atagatgtatgtgtgtctagatttattaacatctatatgaatgtggacaatgctagaaag 114
Query: 132 acttacattgtgaaacggaggaagta 157
|||||||||||||||||||| ||||
Sbjct: 115 tcttacattgtgaaacggagggagta 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||||||||||| | ||| | |||| | ||||| |||| |||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 62 atgaatctaga 72
|| ||||||||
Sbjct: 80 ataaatctaga 70
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 88 ctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaac 147
|||||||||||| || |||||| || ||| ||||| | |||||||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 148 ggaggaagta 157
||||| ||||
Sbjct: 122 ggagggagta 131
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| |||||| | ||||| || || ||||||||| |
Sbjct: 132 atactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgct 73
Query: 61 aatgaatctag 71
|||||||||||
Sbjct: 72 aatgaatctag 62
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 118 gaaatgcttgaatgacttacattgtgaaacggagg 152
|||||| | |||||||||| |||||||||||||||
Sbjct: 44 gaaatgatagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 76 atatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
||||| |||||| |||||||||||||| | |||| ||||||| |||||| ||| | |||
Sbjct: 55 atatacatatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtctt 114
Query: 136 acattgtgaaacggaggaagta 157
| ||||||||||||||| ||||
Sbjct: 115 atattgtgaaacggagggagta 136
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 76 atatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
||||| |||||| |||||||||||||| | |||| ||||||| |||||| ||| | |||
Sbjct: 86 atatacatatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtctt 27
Query: 136 acattgtgaaacggaggaagta 157
| ||||||||||||||| ||||
Sbjct: 26 atattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/90 (84%), Gaps = 5/90 (5%)
Strand = Plus / Plus
Query: 36 catttcctacatttatattgatgttaatgaatctagatagatatatatatgtctagattc 95
||||||| || || |||||||| |||||||||||||||||||||| |||||||||
Sbjct: 5 catttcccacgttcatattgatattaatgaatctagatagatata-----atctagattc 59
Query: 96 attaacaccaatataaatgtgggaaatgct 125
||||| | |||||| || ||||||||||||
Sbjct: 60 attaatatcaatatgaacgtgggaaatgct 89
Score = 60.0 bits (30), Expect = 9e-09
Identities = 75/90 (83%), Gaps = 5/90 (5%)
Strand = Plus / Minus
Query: 36 catttcctacatttatattgatgttaatgaatctagatagatatatatatgtctagattc 95
||||||| || || |||||||| ||||||||||||||| ||||| | |||||||||
Sbjct: 87 catttcccacgttcatattgatattaatgaatctagat-----tatatctatctagattc 33
Query: 96 attaacaccaatataaatgtgggaaatgct 125
||||| | |||||| || ||||||||||||
Sbjct: 32 attaatatcaatatgaacgtgggaaatgct 3
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| |||||| ||||| || |||||||||||||||||||||||||| ||||
Sbjct: 58 caatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatg 58
||||||| ||||||||||||||||| |||||| | ||||| ||||| |||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatg 58
||||||| || |||||| ||||||| ||||| ||||||| |||||||||||||||
Sbjct: 144 atactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 104 caatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||| ||||| | ||||||||||||| |||||| |||| ||||
Sbjct: 90 caatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 84 atgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtg 143
||||||||||||||||||| | |||| |||||||| |||||| ||| | |||| | | ||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatg 112
Query: 144 aaacggaggaagta 157
||||||||||||||
Sbjct: 113 aaacggaggaagta 126
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 83 tatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgt 142
|||||||||||||||||||| | |||||||| ||| |||||| ||| | |||||||| |
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattat 122
Query: 143 gaaacggag 151
|||||||||
Sbjct: 123 gaaacggag 131
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||||||||| |||||| ||| | |||||||| |||||||||| |||||
Sbjct: 56 atataaatgtgggcaatgctagaaagtcttacattatgaaacggagaaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 46 atttatattgatgttaatgaatctaga 72
|||||||| ||||||||||||||||||
Sbjct: 93 atttatatagatgttaatgaatctaga 67
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 105 aatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 132 acttacattgtgaaacggaggaagta 157
||||||||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtga 144
|||||| ||||||||||| | |||| |||||||| |||||| ||| | |||||||| |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 145 aacggaggaagta 157
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||| ||||||| | ||| | |||| || ||||| |||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 61 aatgaatctaga 72
||||||| ||||
Sbjct: 64 aatgaatttaga 75
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||| |||||| ||| | |||||||| ||||||||||| ||||
Sbjct: 91 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 81 tatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacatt 140
||||||| |||||||||||||| | || || ||||||| |||||| ||| ||||||||
Sbjct: 81 tatatgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacatt 22
Query: 141 gtgaaacggaggaagta 157
|||||||||||| ||||
Sbjct: 21 gtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| ||||||||||||||||| ||| | |||| || |||| || || ||||||
Sbjct: 4 atactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtt 63
Query: 61 aatgaatcta 70
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtga 144
|||||||||||||||||| | | | |||||| | |||||| ||| | ||||||||||||
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 145 aacggaggaagta 157
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 88 ctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaac 147
||||||||||||||| | |||| ||||||| |||||| ||| | |||||||| ||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 148 ggaggaagta 157
||||| ||||
Sbjct: 138 ggagggagta 147
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 89 tagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacg 148
|||||||||||||| | |||| |||||||| |||||| ||| | |||||||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 149 gaggaagta 157
|||| ||||
Sbjct: 132 gagggagta 140
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| | ||| | |||| || ||||| |||| |||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 62 atgaatcta 70
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 81 tatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacatt 140
|||||||||||||||| ||||| | ||| ||||||| ||||| | ||||||||||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Query: 141 gtgaaacggaggaagta 157
| ||||||||| ||||
Sbjct: 122 ataaaacggagggagta 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||| |||||| | |||||||||||||| ||||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattg 141
|||||| |||||||||||||| | | || |||||||| |||||| ||| | |||||||||
Sbjct: 80 atatgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattg 21
Query: 142 tgaaacggaggaagta 157
|||||| |||| ||||
Sbjct: 20 tgaaacagagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 126/158 (79%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| || |||||||||||||| | ||| | |||| || ||||| || | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 62 atgaatctagatagatatatatatgtctagattcattaacaccaatata--aatgtggga 119
|||||||| | | |||| ||| ||| |||||||||||||| ||||| ||||| |
Sbjct: 65 atgaatct--aaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagc 122
Query: 120 aatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| || | |||||||||||||||||||| ||||
Sbjct: 123 aatgctaaaaagtcttacattgtgaaacggagggagta 160
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 86 gtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaa 145
||||||||||||||||| | |||| ||||||| |||||| |||||| ||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 146 acggaggaagta 157
|| |||| ||||
Sbjct: 121 acagagggagta 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 115 tgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||| |||||||||||||| ||||||||||||||||
Sbjct: 47 tgggtaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtt 60
||||||| || |||||| ||||||| |||||| | |||| || |||| |||| ||||||
Sbjct: 133 atactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtt 74
Query: 61 aatgaatctaga 72
||||||||||||
Sbjct: 73 aatgaatctaga 62
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 78 atatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttac 137
||||| ||||||||||||||||||| | |||| ||||||| |||||| ||| | |||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttac 112
Query: 138 attgtgaaacggaggaagta 157
||| |||||| |||| ||||
Sbjct: 113 attatgaaacagagggagta 132
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 78 atatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttac 137
||||||||||||||||||||||||| |||| |||||||| |||||| ||| | ||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttat 112
Query: 138 attgtgaaacggaggaagta 157
| | ||||||||||| ||||
Sbjct: 113 aatttgaaacggagggagta 132
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 89 tagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacg 148
|||||||||||| | |||||| || || |||||||| |||||||||| |||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 149 gagg 152
||||
Sbjct: 13 gagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 98 taacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||| ||| || |||||| ||||||| ||||||||| ||||||||||||||||||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||||||||| ||| |||||| | |||||| | || |||||||| ||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaatc 71
Query: 69 ta 70
||
Sbjct: 72 ta 73
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/75 (86%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| ||||| |||||||||||| | ||||||| ||||||||||||||||||
Sbjct: 92 acattcatatagatgtaaatgaatctagaca--tatatatgtgtctagattcattaacat 35
Query: 104 caatataaatgtggg 118
| |||| ||||||||
Sbjct: 34 ctatatgaatgtggg 20
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| ||||||||||||||||| | | ||||||||||||||||||||| |||
Sbjct: 23 acattcatatagatgttaatgaatctag--acacatatatatgtctagattcatttacat 80
Query: 104 caatataaatgtg 116
| |||| ||||||
Sbjct: 81 ctatatgaatgtg 93
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 71/84 (84%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 44 acatttatattgatgttaatgaatctagata----gatatatatatgtctagattcatta 99
||||| |||| |||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 19 acattcatatggatgttaatgaatctagatatatggatattaatgtgtctagattcatta 78
Query: 100 acaccaatataaatgtgggaaatg 123
||| | |||| |||||||| ||||
Sbjct: 79 acatccatatgaatgtgggcaatg 102
Score = 60.0 bits (30), Expect = 9e-09
Identities = 81/96 (84%), Gaps = 4/96 (4%)
Strand = Plus / Minus
Query: 34 aacatttcctacatttatattgatgttaatgaatctagatagat--atat--atatgtct 89
|||||| || ||||| |||| |||||||||||||||||| | || |||| |||| |||
Sbjct: 104 aacattgcccacattcatatggatgttaatgaatctagacacattaatatccatatatct 45
Query: 90 agattcattaacaccaatataaatgtgggaaatgct 125
||||||||||||| | |||| |||||||| ||||||
Sbjct: 44 agattcattaacatccatatgaatgtgggcaatgct 9
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 73 tagatatatatatgtctagattcattaacaccaatataaatgtgggaaatg 123
|||| ||||||||||||||||| |||| || |||||| |||||||||||||
Sbjct: 62 tagacatatatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 78 atatatatgtctagattcattaacaccaatataaatgtgggaaatg 123
|||||||||||||| ||||||| || |||||| |||||||||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 83 tatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgt 142
|||||||| |||||||| | | |||| |||||||| |||||| ||| | ||||||||||
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgt 111
Query: 143 gaaacggaggaagta 157
|||||||| ||||||
Sbjct: 112 gaaacggatgaagta 126
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 73/88 (82%), Gaps = 8/88 (9%)
Strand = Plus / Minus
Query: 36 catttcctacatttatattgatgttaatgaatctagatagatatatatatgtctagattc 95
||||||| ||||| |||||||||| |||||||||||| |||| ||||||||||
Sbjct: 84 catttcccacattcatattgatgtcaatgaatctagacagat--------gtctagattc 33
Query: 96 attaacaccaatataaatgtgggaaatg 123
||| ||| |||||| |||||||||||||
Sbjct: 32 attgacatcaatatgaatgtgggaaatg 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacaccaatataaatgtgggaaatgct 125
|||||||||||||| ||| |||||| |||||||||||||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatgct 86
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| | ||| ||||||||| |||||| ||| | |||||||| |||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 147 cggaggaagta 157
| |||| ||||
Sbjct: 15 ctgagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| || |||||| ||||||| | ||| | |||| || |||||| ||| |||||||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgtta 64
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 111 aatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| |||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 51 aatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 92 attcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggag 151
|||||||| || |||||| ||||||||||||||| |||||||| ||||||| |||| |
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacgagg 108
Query: 152 gaagta 157
||||||
Sbjct: 109 gaagta 114
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttc 41
|||||| |||||||||||||||||||||||| | ||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttc 44
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 128 aatgacttacattgtgaaacggaggaagta 157
||||||||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
||||||||||||| | |||||||||| || ||||||| ||||| |||||||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Query: 147 cggaggaagta 157
||||| ||||
Sbjct: 96 tggagggagta 106
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||| ||||||||||||| ||||| | ||||| | |||||||||||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 62 atgaatctagata 74
|||||||||||||
Sbjct: 46 atgaatctagata 34
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 76 atatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
|||||||||||||||||||||||| || | |||| |||||||| |||| | ||| | |||
Sbjct: 57 atatatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctt 116
Query: 136 acattgtgaaacggaggaagta 157
| | | ||||||||||| ||||
Sbjct: 117 ataatatgaaacggagggagta 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatat 85
||||| |||| |||| ||||||||||||| | ||||||||||
Sbjct: 96 acattcatatagatgctaatgaatctagacatatatatatat 55
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 60.0 bits (30), Expect = 9e-09
Identities = 73/86 (84%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 72 atagatatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatg 131
|||||| || |||||| |||||||| ||||| | | || ||||||| || |||| ||| |
Sbjct: 55 atagatgtacatatgtttagattcaataacatctaaatgaatgtggcaa-tgctagaaag 113
Query: 132 acttacattgtgaaacggaggaagta 157
|||||||||||||||||||||||||
Sbjct: 114 tcttacattgtgaaacggaggaagta 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 120 aatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||| | |||| ||||||||||||||||||||
Sbjct: 42 aatgctagaaaggcttagattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 76 atatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
|||||| |||| |||||||| |||||| | |||| |||||||| |||||| ||| | |||
Sbjct: 86 atatatgtatgcctagattcgttaacatctatatgaatgtgggcaatgctagaaagtctt 27
Query: 136 acattgtgaaacggaggaagta 157
| | | ||||||||||||||||
Sbjct: 26 ataatatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 76 atatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
|||||||| ||| |||||||||||||| | ||||| ||||||| |||| | ||| | |||
Sbjct: 53 atatatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtctt 112
Query: 136 acattgtgaaacggaggaagta 157
| ||||| ||||||||| ||||
Sbjct: 113 atattgtaaaacggaggtagta 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 9 tccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgttaatgaatc 68
||||||| ||||| ||| | ||| |||||| || |||| ||||| ||||||||||||||
Sbjct: 127 tccgttttacaatataagactttctaacattgcccacatatatatagatgttaatgaatc 68
Query: 69 tagatagatatatata 84
|| | | |||||||||
Sbjct: 67 taaacacatatatata 52
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 76 atatatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
|||||| | |||||||||||||||||| |||| |||||||| || ||| ||| | |||
Sbjct: 86 atatatgtgtgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtctt 27
Query: 136 acattgtgaaacggaggaagta 157
||||| |||||| |||||||||
Sbjct: 26 acattatgaaaccgaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 83/102 (81%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 56 atgttaatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgt 115
|||||||||||||||| | | | |||||||| |||||||||| | | | |||| |||||
Sbjct: 59 atgttaatgaatctag--acacacatatatgtttagattcattgatatctatatgaatgt 116
Query: 116 gggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
||| |||||| || | |||||||| |||||| |||| ||||
Sbjct: 117 gggcaatgctaaaaagtcttacattatgaaaccgagggagta 158
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 120 aatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| |||||||||||||| ||||||||||||||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagta 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacat 139
||||| ||||||||||||||| | | |||| || |||| ||| | |||||||||||||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 140 tgtgaaacggaggaagta 157
| ||||||||||| ||||
Sbjct: 22 tatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 2 tactccatccgtttcacaatgtaactcattcaaacatttcctacatttatattgatgtta 61
|||||| ||||||||| ||||||| |||||| || ||| || | || |||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 91 gattcattaacaccaatataaatgtgggaaatgcttgaatgactt 135
||||||||| || |||||| ||||||||||||||| |||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 91 gattcattaacaccaatataaatgtgggaaatgcttgaatga 132
||||||||| || |||||| ||||||||||||||| ||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 121 atgcttgaatgacttacattgtgaaacggaggaagta 157
||||| |||||||||||| ||||||||||||||||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 119 aaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| |||||||||| |||||||||||||| |||||
Sbjct: 51 aaatgctagaatgacttatattgtgaaacggagtaagta 89
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 78 atatatatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttac 137
||||||||||||||||||||| ||| |||| |||||||| |||| | ||| | ||||
Sbjct: 84 atatatatgtctagattcattgacatatatatgaatgtgggcaatgttagaaagtcttat 25
Query: 138 attgtgaaacggaggaagta 157
| | ||||||||||||||||
Sbjct: 24 aatatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtga 144
||||||||||| |||||| | |||| ||||||| |||||| ||| | |||||||| |||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 145 aacggagg 152
||||||||
Sbjct: 96 aacggagg 103
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||| || ||| ||| | |||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 106 atataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||| |||||||| |||||| ||| |||||||||||||||||||| ||||
Sbjct: 69 atatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 56.0 bits (28), Expect = 1e-07
Identities = 95/115 (82%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattca-ttaaca 102
||||| |||| ||||||||||||||||||| |||| || |||||||||| | ||||||
Sbjct: 117 acattcatatagatgttaatgaatctagat--atatgtaggtgtctagattaatttaaca 60
Query: 103 ccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
| |||| |||||||| |||||| ||| | |||| | | ||||||||||| ||||
Sbjct: 59 tctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattg 141
|||| |||||||||||||||| | |||| |||||||| |||||| ||| | |||| | |
Sbjct: 84 atatatctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatc 143
Query: 142 tgaaacggaggaagta 157
||||||||||| ||||
Sbjct: 144 tgaaacggagggagta 159
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
|||||||||||||||| | |||| ||| || | |||||| ||| |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 147 cggaggaagta 157
| |||||||||
Sbjct: 15 cagaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 87 tctagattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaa 146
||||||||||||| || | |||| ||| |||| |||||| ||| | |||| ||| |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 147 cggaggaagta 157
|||||| ||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 90 agattcattaacaccaatataaatgtgggaaatgcttgaatgacttacattgtgaaacgg 149
||||||||||||| | | |||||||||| ||| || ||| | |||||||||||||||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacgg 110
Query: 150 agg 152
|||
Sbjct: 111 agg 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 120 aatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| ||| | |||||||||||||||||||| ||||
Sbjct: 42 aatgctagaaagccttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 119 aaatgcttgaatgacttacattgtgaaacggaggaagta 157
||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 66 aaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 atactccatccgtttcacaatgtaactcattc 32
||||||| ||||||||||||||||| ||||||
Sbjct: 105 atactccctccgtttcacaatgtaaatcattc 74
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 107 tataaatgtgggaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||| |||| ||||||| |||||||||| ||| ||||||||||| ||||
Sbjct: 55 tataaaggtggaaaatgctagaatgacttatattatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 118 gaaatgcttgaatgacttacattgtgaaacggaggaagta 157
|||||||| |||||||||||||| ||||||| ||| ||||
Sbjct: 107 gaaatgctagaatgacttacattatgaaacgaagggagta 146
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 56 atgttaatgaatctagatagatatatatatgtctagattcattaacaccaatataaatgt 115
|||||||||||||||| | || ||||||| ||||||||||||||| | |||| |||||
Sbjct: 35 atgttaatgaatctaggca--tacatatatgcctagattcattaacatctatatgaatgt 92
Query: 116 gggaaatgct 125
||| ||||||
Sbjct: 93 gggcaatgct 102
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/59 (86%), Gaps = 2/59 (3%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaaca 102
||||| |||| ||||||||||||||||| |||||| |||| |||||||||||||||
Sbjct: 92 acattcatatagatgttaatgaatctag--gcatatatgtatgcctagattcattaaca 36
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 54.0 bits (27), Expect = 6e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| |||||||||||||||| | | | |||| | ||| ||||||||||||||
Sbjct: 118 acattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaacat 59
Query: 104 caatataaatgtggg 118
| |||| ||||||||
Sbjct: 58 ctatatgaatgtggg 44
Score = 54.0 bits (27), Expect = 6e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 44 acatttatattgatgttaatgaatctagatagatatatatatgtctagattcattaacac 103
||||| |||| |||||||||||||||| | | | |||| | ||| ||||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaacat 106
Query: 104 caatataaatgtggg 118
| |||| ||||||||
Sbjct: 107 ctatatgaatgtggg 121
