miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 119 bits (60), Expect = 7e-27
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||| |||||||||||||||| | |||| |||||||||||||||||||||| |||||||
Sbjct: 14 atttctcacattcatattgatgttaatgaatctagatagatatatatgtctagattcatt 73
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||||||||||||||| |||||||||||||
Sbjct: 74 aacatcaatatgaatgtgggaaatgctagaat 105
Score = 103 bits (52), Expect = 4e-22
Identities = 83/92 (90%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | |||| |||||| | |||||| | |||| |||||||
Sbjct: 97 atttcccacattcatattgatgttaatgaatctagacatatatatctatctagattcatt 38
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||||||||||||||||||||||||
Sbjct: 37 aacatcaatatgaatgtgagaaatgctagaat 6
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 119 bits (60), Expect = 7e-27
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | |||| |||| ||||||||||||||||| |||||||
Sbjct: 97 atttcccacattcatattgatgttaatgaatctaaatagatatatatgtctagattcatt 38
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||||||||||||||| |||||||||||||
Sbjct: 37 aacatcaatatgaatgtgggaaatgctagaat 6
Score = 87.7 bits (44), Expect = 2e-17
Identities = 81/92 (88%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | |||| |||||| | |||||| | | || |||||||
Sbjct: 14 atttcccacattcatattgatgttaatgaatctagacatatatatctatttagattcatt 73
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||||||||||||||| |||||||||||||
Sbjct: 74 aacatcaatatgaatgtgggaaatgctagaat 105
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 4e-25
Identities = 79/85 (92%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||||||||||||||||| || | |||| |||||||||||||||||||||| |||||||
Sbjct: 40 atttcccacattcatattgttgttaatgaatctagatagatatatatgtctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatg 92
|||||||||||||||||| ||||||
Sbjct: 100 accatcaatatgaatgtgggaaatg 124
Score = 87.7 bits (44), Expect = 2e-17
Identities = 81/92 (88%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | |||| |||||| | |||||| | |||| |||||||
Sbjct: 123 atttcccacattcatattgatggtaatgaatctagacatatatatctatctagattcatt 64
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| || ||||||||||||| |||||||||||||
Sbjct: 63 aacaacaatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 78/84 (92%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | |||| |||||||||||||||||||||| |||||||
Sbjct: 40 atttcccacattcatattgatgttaatgaatctagatagatatatatgtctacattcatt 99
Query: 68 accatcaatatgaatgtgagaaat 91
| |||||||||||||||| |||||
Sbjct: 100 aacatcaatatgaatgtgggaaat 123
Score = 89.7 bits (45), Expect = 6e-18
Identities = 82/93 (88%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 8 tatttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcat 66
||||||||||||||||||||||| | |||| | |||| | |||||| | |||| ||||||
Sbjct: 124 tatttcccacattcatattgatgttaatgaatgtagacatatatatctatctagattcat 65
Query: 67 taccatcaatatgaatgtgagaaatgctagaat 99
|| |||||||||||||||| |||||||||||||
Sbjct: 64 taacatcaatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 84/92 (91%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||| ||| | |||| |||||||||||||||||||||| |||||||
Sbjct: 40 atttcccacattcatatttatgttaatgaatctagatagatatatatgtctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||| ||||||| ||||||||||||
Sbjct: 100 atcatcaatataaatgtgaaaaatgctagaat 131
Score = 60.0 bits (30), Expect = 6e-09
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 15 cacattcatattgatgctgatga-tctagatagatatatatgtctatattcattaccatc 73
|||||| ||||||||| | |||| |||||| | |||||| | |||| |||||||| |||
Sbjct: 117 cacatttatattgatgataatgaatctagacatatatatctatctagattcattaacata 58
Query: 74 aatatgaatgtgagaaatgcta 95
|||||||||||| |||||||||
Sbjct: 57 aatatgaatgtgggaaatgcta 36
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 87/96 (90%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtcta 59
||||||| |||||||||||||||||| ||| | |||| ||||||||||||||||||||||
Sbjct: 131 attttagcatttcccacattcatattaatgttaatgaatctagatagatatatatgtcta 72
Query: 60 tattcattaccatcaatatgaatgtgagaaatgcta 95
|||||||| |||||||||||||||| | |||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggtaatgcta 36
Score = 71.9 bits (36), Expect = 1e-12
Identities = 73/84 (86%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 13 cccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattacca 71
|||||||||||||||||| | |||| |||||| | |||||| | |||| |||||||| ||
Sbjct: 44 cccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaaca 103
Query: 72 tcaatatgaatgtgagaaatgcta 95
| |||||||||||| |||||||||
Sbjct: 104 ttaatatgaatgtgggaaatgcta 127
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 4e-22
Identities = 86/96 (89%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 5 tagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtctatatt 63
|||||||| ||| ||||||||||||||| |||| | ||||||||||||||||| || |||
Sbjct: 36 tagtattttccatattcatattgatgctaatgaatttagatagatatatatgtttagatt 95
Query: 64 cattaccatcaatatgaatgtgagaaatgctagaat 99
||||| ||||||||||||| ||||||||| ||||||
Sbjct: 96 cattagcatcaatatgaatatgagaaatgttagaat 131
Score = 56.0 bits (28), Expect = 9e-08
Identities = 77/92 (83%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||| || ||||||||||||||| |||| |||| | | |||||| | |||| |||||||
Sbjct: 123 atttctcatattcatattgatgctaatgaatctaaacatatatatctatctaaattcatt 64
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||||||| || |||| |||||||
Sbjct: 63 agcatcaatatgaatatggaaaatactagaat 32
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 4e-22
Identities = 83/92 (90%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||| ||||||||||||||| || |||| |||||||||||||||||||||| |||||||
Sbjct: 40 atttctcacattcatattgatactaatgaatctagatagatatatatgtctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||||||||||||||| ||||| ||||||
Sbjct: 100 agcatcaatatgaatgtggtaaatgttagaat 131
Score = 95.6 bits (48), Expect = 1e-19
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||| ||||||||||||||||||| |||| |||||| | |||||| | |||| |||||||
Sbjct: 123 atttaccacattcatattgatgctaatgaatctagacatatatatctatctagattcatt 64
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||||||||||||||||||||||||||||
Sbjct: 63 agtatcaatatgaatgtgagaaatgctagaat 32
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 101 bits (51), Expect = 2e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||
Sbjct: 94 atctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgctag 35
Query: 97 aat 99
|||
Sbjct: 34 aat 32
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 7e-21
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||||||||||||||||||| | |||| |||||||||||||||||||||| |||||||
Sbjct: 123 atttcccacattcatattgatattaatgaatctagatagatatatatgtctagattcatt 64
Query: 68 accatcaatatgaatgtgagaaatgc 93
| ||||||||| |||||| |||||||
Sbjct: 63 aacatcaatataaatgtgggaaatgc 38
Score = 79.8 bits (40), Expect = 6e-15
Identities = 80/92 (86%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||| ||||||||| | |||| |||||| | |||||| | |||| |||||||
Sbjct: 40 atttcccacatttatattgatgttaatgaatctagacatatatatctatctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||||||||| |||||||||||||
Sbjct: 100 aatatcaatatgaatgtgggaaatgctagaat 131
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 97.6 bits (49), Expect = 3e-20
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 10 tttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatta 68
|||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||
Sbjct: 40 tttcccacattcatattgatattaatgaatctagatagatatatatgtctagattcatta 99
Query: 69 ccatcaatatgaatgtg 85
||||||||||||||||
Sbjct: 100 acatcaatatgaatgtg 116
Score = 63.9 bits (32), Expect = 4e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 8 tatttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcat 66
||||| ||||||||||||||||| | |||| |||||| | |||||| | |||| ||||||
Sbjct: 123 tattttccacattcatattgatgttaatgaatctagacatatatatctatctagattcat 64
Query: 67 taccatcaatatgaatgtgagaaa 90
|| ||||||||||||||| ||||
Sbjct: 63 taatatcaatatgaatgtgggaaa 40
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 76/84 (90%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||| | | |||| ||||||||||||||||| |||| |||||||
Sbjct: 40 atttcccacattcatattgacgttaatgaatctagatagatatatatttctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaat 91
||||||||||| |||||| |||||
Sbjct: 100 accatcaatattaatgtgggaaat 123
Score = 87.7 bits (44), Expect = 2e-17
Identities = 87/100 (87%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtcta 59
||||||| |||||||||||| ||||||||| | |||| |||||| | |||||| | ||||
Sbjct: 131 attttagaatttcccacattaatattgatggtaatgaatctagaaatatatatctatcta 72
Query: 60 tattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| | |||||||||||||| |||||||||||||
Sbjct: 71 gattcattaacgtcaatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 85/96 (88%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 5 tagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtctatatt 63
|||||||| ||||||||||||||| | |||| |||||||||||||||||||||| |||
Sbjct: 127 tagtatttttcacattcatattgattttaatgaatctagatagatatatatgtctagatt 68
Query: 64 cattaccatcaatatgaatgtgagaaatgctagaat 99
||||| ||||||||||||||| |||||| ||||||
Sbjct: 67 cattaatatcaatatgaatgtgggaaatgttagaat 32
Score = 71.9 bits (36), Expect = 1e-12
Identities = 79/92 (85%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||||||||||||||||||| | |||| |||||| | |||||| | |||| |||||||
Sbjct: 40 atttcccacattcatattgatattaatgaatctagacatatatatctatctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||||||||||||||| |||| |||||||
Sbjct: 100 aaaatcaatatgaatgtgaaaaatactagaat 131
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | |||| |||||||| |||||||||| || |||||||
Sbjct: 123 atttcccacattcatattgatgttaatgaatctagataaatatatatgtatagattcatt 64
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||||||| || ||||||||||||
Sbjct: 63 aacatcaatatgaatatggaaaatgctagaat 32
Score = 71.9 bits (36), Expect = 1e-12
Identities = 79/92 (85%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||| ||| ||||||||||||| | |||| |||| | | |||||| | |||| |||||||
Sbjct: 40 attttccatattcatattgatgttaatgaatctatacatatatatttatctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||||||||||||||| |||||||||||||
Sbjct: 100 aacatcaatatgaatgtgggaaatgctagaat 131
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||| |||||||||||||||| | |||| |||| ||||||||||||||||| |||||||
Sbjct: 123 attttccacattcatattgatattaatgaatctaaatagatatatatgtctagattcatt 64
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||| |||||||||| |||||||||||||
Sbjct: 63 aacatcactatgaatgtgggaaatgctagaat 32
Score = 56.0 bits (28), Expect = 9e-08
Identities = 77/92 (83%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||| ||||| | |||| |||||| | |||||| | | || |||||||
Sbjct: 40 atttcccacattcatagtgatgttaatgaatctagacatatatatctatttagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||||||||| ||||| ||||||
Sbjct: 100 aatatcaatatgaatgtggaaaatgttagaat 131
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 88/100 (88%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 attttagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtcta 59
||||||| |||||||||||||||||| || | |||| ||||||||||||||||||||||
Sbjct: 32 attttagcatttcccacattcatattagtgttaatgaatctagatagatatatatgtcta 91
Query: 60 tattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| ||| |||||||||||| |||||||||||
Sbjct: 92 gattcattaacattaatatgaatgtggagaatgctagaat 131
Score = 54.0 bits (27), Expect = 3e-07
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 14 ccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattaccat 72
||||||||||||| ||| | |||| |||||| | |||||| | |||| |||||||| ||
Sbjct: 118 ccacattcatattaatgttaatgaatctagacatatatatctatctagattcattaacac 59
Query: 73 caatatgaatgtgagaaatgcta 95
|||||||||||| |||||||||
Sbjct: 58 taatatgaatgtgggaaatgcta 36
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||| |||||| |||||||||| | |||| |||||||||||||||||||||| |||||||
Sbjct: 40 attttccacatccatattgatgttaatgaatctagatagatatatatgtctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| || ||||||||||||| ||||| |||||||
Sbjct: 100 aacaacaatatgaatgtgggaaatactagaat 131
Score = 79.8 bits (40), Expect = 6e-15
Identities = 83/96 (86%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 5 tagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtctatatt 63
||||||||||||||||||||||| || | |||| |||||| | |||||| | |||| |||
Sbjct: 127 tagtatttcccacattcatattgttgttaatgaatctagacatatatatctatctagatt 68
Query: 64 cattaccatcaatatgaatgtgagaaatgctagaat 99
||||| |||||||||| ||||| ||||||||||||
Sbjct: 67 cattaacatcaatatggatgtggaaaatgctagaat 32
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 93.7 bits (47), Expect = 4e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
||||||||||||||||||||||| |||||||| ||||| |||||||||| ||||||||||
Sbjct: 73 atctagatagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctag 132
Query: 97 aat 99
|||
Sbjct: 133 aat 135
Score = 48.1 bits (24), Expect = 2e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
|||||||||||||||| ||||| | ||| ||||||| | |||||| | |||| |||||||
Sbjct: 127 atttcccacattcatagtgatgttaatgaatctagacatatatatctatctagattcatt 68
Query: 68 accatcaatatg 79
| ||||| ||||
Sbjct: 67 aacatcactatg 56
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 77/86 (89%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 15 cacattcatattgatgctgatga-tctagatagatatatatgtctatattcattaccatc 73
||||| |||||||||||| |||| |||||||||||||||||||||| ||||||| ||||
Sbjct: 117 cacatccatattgatgctaatgaatctagatagatatatatgtctagattcattggcatc 58
Query: 74 aatatgaatgtgagaaatgctagaat 99
||||||||||| ||||||||||||
Sbjct: 57 gatatgaatgtggaaaatgctagaat 32
Score = 54.0 bits (27), Expect = 3e-07
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
|||| |||||||||||| ||||| ||| ||||||| | |||||| | |||| |||||||
Sbjct: 40 attttccacattcatatcgatgccaatgaatctagacatatatatctatctagattcatt 99
Query: 68 accatcaatatgaatgtga 86
| |||||||||| ||||||
Sbjct: 100 agcatcaatatggatgtga 118
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 83/94 (88%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtcta 59
||||||| |||||||||||| ||||||||| | |||| |||||||||| |||||||||||
Sbjct: 131 attttagcatttcccacatttatattgatgttaatgaatctagatagaaatatatgtcta 72
Query: 60 tattcattaccatcaatatgaatgtgagaaatgc 93
|||||| | ||||||||| |||||| |||||||
Sbjct: 71 gattcataaacatcaatataaatgtgggaaatgc 38
Score = 63.9 bits (32), Expect = 4e-10
Identities = 75/88 (85%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
|||||||||||| ||||||||| | ||| ||||||| | |||| | | |||| |||||||
Sbjct: 40 atttcccacatttatattgatgtttatgaatctagacatatatttctatctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgcta 95
| ||||||||| |||||| |||||||||
Sbjct: 100 aacatcaatataaatgtgggaaatgcta 127
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 89.7 bits (45), Expect = 6e-18
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||||||||||||||| |||| |||||| |||| ||| ||||| ||||||| |||||||
Sbjct: 123 atttcccacattcatatagatgttgatgaatctaaatatatatagatgtctagattcatt 64
Query: 68 accatcaatatgaatgtgagaaatg 92
| |||| ||||||||||||||||||
Sbjct: 63 aacatctatatgaatgtgagaaatg 39
Score = 56.0 bits (28), Expect = 9e-08
Identities = 77/92 (83%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||| ||||||||||| |||| | |||| |||||| | ||||||| | || ||||||
Sbjct: 40 atttctcacattcatatagatgttaatgaatctagacatctatatatatttagattcatc 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||| ||||||||||| |||||||||||||
Sbjct: 100 aacatctatatgaatgtgggaaatgctagaat 131
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 2e-17
Identities = 81/92 (88%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||| |||||||| |||||||| | |||| |||||||||||||||||||||| |||||||
Sbjct: 40 attttccacattcgtattgatgttaatgactctagatagatatatatgtctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||||||| | ||||||||||||
Sbjct: 100 agcatcaatatgaatatagaaaatgctagaat 131
Score = 61.9 bits (31), Expect = 1e-09
Identities = 71/83 (85%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 18 attcatattgatgctgatga-tctagatagatatatatgtctatattcattaccatcaat 76
||||||||||||||| |||| |||||| | |||||| | |||| | |||||| |||||||
Sbjct: 114 attcatattgatgctaatgaatctagacatatatatctatctagagtcattaacatcaat 55
Query: 77 atgaatgtgagaaatgctagaat 99
| ||||||| ||||||||||||
Sbjct: 54 acgaatgtggaaaatgctagaat 32
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 87.7 bits (44), Expect = 2e-17
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 13 cccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattacca 71
|||| |||||||| |||| | |||| ||||| | |||||||||||||| |||||||| ||
Sbjct: 44 cccatattcatatggatgttaatgaatctagttggatatatatgtctagattcattaaca 103
Query: 72 tcaatatgaatgtgagaaatgctagaat 99
| ||||||||||||||||||||||||||
Sbjct: 104 ttaatatgaatgtgagaaatgctagaat 131
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 2e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||| | ||||||||||||| | |||| |||||||||||||| |||||||||||||||
Sbjct: 40 atttcctatattcatattgatgttaatgaatctagatagatatagatgtctatattcatt 99
Query: 68 accatcaatatgaatg 83
| ||||||||||||||
Sbjct: 100 aacatcaatatgaatg 115
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||||||||||||| | |||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatataggaaatgctagaat 32
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 77/87 (88%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 14 ccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattaccat 72
||||||||||||| ||| | |||| |||||||| |||||||| |||| |||||||| ||
Sbjct: 45 ccacattcatattaatgttaatgaatctagataaatatatatatctagattcattaatat 104
Query: 73 caatatgaatgtgagaaatgctagaat 99
||||||||||||| |||||||||||||
Sbjct: 105 caatatgaatgtgggaaatgctagaat 131
Score = 67.9 bits (34), Expect = 2e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||||||||||||||||||| | |||| |||||||| |||||| | |||| |||||||
Sbjct: 123 atttcccacattcatattgatattaatgaatctagatatatatatttatctagattcatt 64
Query: 68 accatcaatatgaatgtg 85
| ||| ||||||||||||
Sbjct: 63 aacattaatatgaatgtg 46
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| |||
Sbjct: 94 atctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgatag 35
Query: 97 aat 99
|||
Sbjct: 34 aat 32
Score = 63.9 bits (32), Expect = 4e-10
Identities = 78/92 (84%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||||||||||||||||||| | |||| |||||| | |||||| | |||| |||||||
Sbjct: 40 atttcccacattcatattgatattaatgaatctagacatatatatctatctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| | |||||||||||||||||||||||||
Sbjct: 100 aactaatatatgaatgtgagaaatgctagaat 131
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
||||||||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||
Sbjct: 69 atctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatactag 128
Query: 97 aat 99
|||
Sbjct: 129 aat 131
Score = 61.9 bits (31), Expect = 1e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 5 tagtatttcccacattcatattgatgctgatg-atctagatagatatatatgtctatatt 63
||||||||||||||||||||||||| | ||| ||||||| | |||||| | |||| |||
Sbjct: 127 tagtatttcccacattcatattgatattaatgaatctagacatatatatctatctagatt 68
Query: 64 cattaccatcaatat 78
||||| |||||||||
Sbjct: 67 cattaacatcaatat 53
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaat 98
Score = 75.8 bits (38), Expect = 9e-14
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 58 tatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 52 tatattcattagcatcaatatgaatgtgagaaatgctagaat 11
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 4e-16
Identities = 76/86 (88%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 15 cacattcatattgatgctgatga-tctagatagatatatatgtctatattcattaccatc 73
||||||||||||||| | |||| |||| ||||||||||||||||| |||||||| || |
Sbjct: 117 cacattcatattgatattaatgaatctaaatagatatatatgtctagattcattaacacc 58
Query: 74 aatatgaatgtgagaaatgctagaat 99
||||| |||||| |||||||||||||
Sbjct: 57 aatataaatgtgggaaatgctagaat 32
Score = 63.9 bits (32), Expect = 4e-10
Identities = 78/92 (84%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||| |||||| || | |||| |||||| | |||||| | | || |||||||
Sbjct: 40 atttcccacatttatattggtgttaatgaatctagacatatatatctatttagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||||||||||||||| ||||||||||||
Sbjct: 100 aatatcaatatgaatgtgaaaaatgctagaat 131
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||||| |||||||| |||||||||||||||| |||||||||||||
Sbjct: 79 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaat 131
Score = 48.1 bits (24), Expect = 2e-05
Identities = 73/88 (82%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | ||| ||||||| | |||||| | ||| ||| |||
Sbjct: 123 atttcccacattcatattgatgttaatgaatctagacatatatatttagctaaatttatt 64
Query: 68 accatcaatatgaatgtgagaaatgcta 95
| || |||||||||||| ||||||||
Sbjct: 63 aatataaatatgaatgtggaaaatgcta 36
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 81.8 bits (41), Expect = 2e-15
Identities = 80/92 (86%), Gaps = 7/92 (7%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||||| |||| |||||||| |||||||| |||||||
Sbjct: 40 atttcccacattcatattgatgctaatgaatctagata------tatgtctagattcatt 93
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||||||||| |||||||||||||
Sbjct: 94 agcatcaatatgaatgtaggaaatgctagaat 125
Score = 67.9 bits (34), Expect = 2e-11
Identities = 78/91 (85%), Gaps = 5/91 (5%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatgatctagatagatatatatgtctatattcatta 68
|||||| ||||||||||||||||| |||| | |||| |||||| ||| ||||||||
Sbjct: 117 atttcctacattcatattgatgctaatga---atctagacatatat--ctagattcatta 63
Query: 69 ccatcaatatgaatgtgagaaatgctagaat 99
|||||||||||||||| |||||||||||||
Sbjct: 62 gcatcaatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 81/92 (88%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | |||| |||||| | |||||||||||| |||||||
Sbjct: 121 atttcccacattcatattgatgttaatgaatctagaca--tatatatgtctacattcatt 64
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||||||||| ||||||||||||
Sbjct: 63 aacatcaatatgaatgtagaaaatgctagaat 32
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||||| |||||||| |||||||||||||||| |||||||||||||
Sbjct: 77 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaat 129
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 79.8 bits (40), Expect = 6e-15
Identities = 81/92 (88%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | |||| ||||| | ||| |||||| || |||||||
Sbjct: 40 atttcccacattcatattgatgttaatgaatctagc-acatacatatgtttagattcatt 98
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||||||||||||||| |||||||||||||
Sbjct: 99 aacatcaatatgaatgtgggaaatgctagaat 130
Score = 71.9 bits (36), Expect = 1e-12
Identities = 80/92 (86%), Gaps = 2/92 (2%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | |||| |||| | | || ||| || ||| |||||||
Sbjct: 122 atttcccacattcatattgatgttaatgaatctaaacatatgtatgtg-ctagattcatt 64
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||||||||||||||| |||||||||||||
Sbjct: 63 aacatcaatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 79.8 bits (40), Expect = 6e-15
Identities = 77/88 (87%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||| | || | |||| |||||| |||||||||||||| |||||||
Sbjct: 40 atttcccacattcatacttatattaatgaatctagacggatatatatgtctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgcta 95
| |||||||||| |||||||||||||||
Sbjct: 100 agcatcaatatggatgtgagaaatgcta 127
Score = 71.9 bits (36), Expect = 1e-12
Identities = 85/100 (85%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtcta 59
||||||| ||||| ||||| |||||||||||| |||| |||||| | |||||| |||||
Sbjct: 131 attttagcatttctcacatccatattgatgctaatgaatctagacatatatatccgtcta 72
Query: 60 tattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| || | |||||||||| |||||||||||||
Sbjct: 71 gattcattaatataagtatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 79.8 bits (40), Expect = 6e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 48 tatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||||||| |||||||| |||||||||||||||| |||||||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatg 61
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 6e-15
Identities = 80/92 (86%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||| |||||||||||||||| | |||| |||||||||||||||||||||| |||||||
Sbjct: 40 atttctcacattcatattgatgttaatgaatctagatagatatatatgtctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||| |||||| | ||||||||||||
Sbjct: 100 aatatcaacatgaatttagaaaatgctagaat 131
Score = 69.9 bits (35), Expect = 6e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
||||||| | |||||| | |||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 94 atctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatggtag 35
Query: 97 aat 99
|||
Sbjct: 34 aat 32
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 6e-15
Identities = 83/96 (86%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 5 tagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtctatatt 63
|||||||| ||||| ||||| |||||| |||| |||||||| ||||||||||||| |||
Sbjct: 127 tagtatttttcacatccatatcgatgctaatgaatctagataaatatatatgtctagatt 68
Query: 64 cattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||| ||||||||||| ||||||||||||
Sbjct: 67 cattggcatcgatatgaatgtggaaaatgctagaat 32
Score = 56.0 bits (28), Expect = 9e-08
Identities = 77/92 (83%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
|||| |||||||||||| ||||| ||| ||||||| | |||||| | |||| |||||||
Sbjct: 40 attttccacattcatatcgatgccaatgaatctagacatatatatttatctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||| ||||| |||||| |||| |||||||
Sbjct: 100 agcatcgatatggatgtgaaaaatactagaat 131
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 79.8 bits (40), Expect = 6e-15
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaccatcaatatgaatgtgagaaatgctagaat 32
Score = 63.9 bits (32), Expect = 4e-10
Identities = 79/92 (85%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
||||| |||||||||||||||| | ||| ||||||||||| |||||| |||| |||||||
Sbjct: 40 atttctcacattcatattgatggtaatgaatctagataga-atatatatctagattcatt 98
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||| ||||| ||| || |||||| ||||||
Sbjct: 99 aacattaatataaatatgggaaatgttagaat 130
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 77.8 bits (39), Expect = 2e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
||||| ||||||||||||||||| |||||||| ||||||||||||| || |||||||| |
Sbjct: 94 atctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttg 35
Query: 97 aat 99
|||
Sbjct: 34 aat 32
Score = 50.1 bits (25), Expect = 5e-06
Identities = 77/92 (83%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
|||||||| ||||||||||||| | ||| ||||||| | |||||| | | || ||| |||
Sbjct: 40 atttcccatattcatattgatgttaatgaatctagacatatatatctatatagatttatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||| ||||| |||||||||||||
Sbjct: 100 aacatcaatataaatgt--gaaatgctagaat 129
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 2e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 81 atatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaat 131
Score = 52.0 bits (26), Expect = 1e-06
Identities = 76/92 (82%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||| |||||||||||||||| |||| |||||| | |||| |||||||| |||||
Sbjct: 123 atttctcacattcatattgatgtcaatgaatctagacatatatgtatgtctagattcanc 64
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
||||||||||||||||| ||||||||||
Sbjct: 63 gatttcaatatgaatgtgaganatgctagaat 32
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 77.8 bits (39), Expect = 2e-14
Identities = 78/89 (87%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 5 tagtatttcccacattcatattgatgctgatg-atctagatagatatatatgtctatatt 63
||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| ||
Sbjct: 36 tagtatttcccacattcatattgatactaatgaatctagatagatata---gtctagatc 92
Query: 64 cattaccatcaatatgaatgtgagaaatg 92
|||| |||||||||||||||| ||||||
Sbjct: 93 cattggcatcaatatgaatgtgggaaatg 121
Score = 60.0 bits (30), Expect = 6e-09
Identities = 78/92 (84%), Gaps = 4/92 (4%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
||||||||||||||||||||||| ||| ||||||| ||||| | |||| |||||||
Sbjct: 120 atttcccacattcatattgatgccaatggatctagac---tatatctatctagattcatt 64
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||||||||| ||||| |||||||
Sbjct: 63 agtatcaatatgaatgtgggaaatactagaat 32
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 2e-14
Identities = 76/87 (87%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 14 ccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattaccat 72
|||||||||||| |||||| |||| ||||| | ||||||| ||||| |||||||| |||
Sbjct: 45 ccacattcatatagatgctaatgaatctaggcatatatataagtctagattcattaacat 104
Query: 73 caatatgaatgtgagaaatgctagaat 99
||||||||||||| ||||||||||||
Sbjct: 105 caatatgaatgtggaaaatgctagaat 131
Score = 63.9 bits (32), Expect = 4e-10
Identities = 78/92 (84%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||| ||||||||||||||||| | |||| |||||| ||||||||| ||| |||||||
Sbjct: 123 attttccacattcatattgatgttaatgaatctagacttatatatatgcctagattcatt 64
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||| ||||||||||| |||||||||||
Sbjct: 63 agcatctatatgaatgtggacaatgctagaat 32
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 77.8 bits (39), Expect = 2e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
||||| ||||||||||||||||| |||||||| ||||||||||||| || |||||||| |
Sbjct: 67 atctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttg 126
Query: 97 aat 99
|||
Sbjct: 127 aat 129
Score = 50.1 bits (25), Expect = 5e-06
Identities = 77/92 (83%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
|||||||| ||||||||||||| | ||| ||||||| | |||||| | | || ||| |||
Sbjct: 121 atttcccatattcatattgatgttaatgaatctagacatatatatctatatagatttatt 62
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||| ||||| |||||||||||||
Sbjct: 61 aacatcaatataaatgt--gaaatgctagaat 32
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 2e-14
Identities = 82/95 (86%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 5 tagtatttcccacattcatattgatgctgatg-atctagatagatatatatgtctatatt 63
||||||| ||||||||||||| |||| | ||| ||||||| | |||||| |||||| |||
Sbjct: 36 tagtattgcccacattcatatagatgttaatgaatctagacatatatatgtgtctagatt 95
Query: 64 cattaccatcaatatgaatgtgagaaatgctagaa 98
||||| |||| |||||||| |||| ||||||||||
Sbjct: 96 cattaacatctatatgaatatgagcaatgctagaa 130
Score = 60.0 bits (30), Expect = 6e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
||||||| | ||||||||||||| |||||||| |||| ||||||||||| | ||| ||||
Sbjct: 94 atctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaatactag 35
Query: 97 aa 98
||
Sbjct: 34 aa 33
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 75.8 bits (38), Expect = 9e-14
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 50 tatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||||| |||||||| |||||||||||||||| |||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatg 61
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 73.8 bits (37), Expect = 4e-13
Identities = 58/64 (90%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 36 gatctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgcta 95
||||||||||||||| ||||||| || ||||| |||||||||||||||| |||||||||
Sbjct: 41 gatctagatagatat--atgtctagatccattaacatcaatatgaatgtgggaaatgcta 98
Query: 96 gaat 99
||||
Sbjct: 99 gaat 102
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 94 atttcccacattcatattgatg 73
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 71.9 bits (36), Expect = 1e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaat 32
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 71.9 bits (36), Expect = 1e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaat 32
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 1e-12
Identities = 79/92 (85%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||||||||||||||| | || | |||| |||||||| ||||| ||||||| |||||||
Sbjct: 40 atttcccacattcatataggtgttaatgaatctagatatatatagatgtctagattcatt 99
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| || | ||||||||||| ||||||||||||
Sbjct: 100 aacacctatatgaatgtggaaaatgctagaat 131
Score = 48.1 bits (24), Expect = 2e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 48 tatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||| |||| |||||||| || | ||||||||||| |||||| ||||||
Sbjct: 83 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaat 32
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 71.9 bits (36), Expect = 1e-12
Identities = 79/92 (85%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||||||||||||||| | || | |||| |||||||| ||||| ||||||| |||||||
Sbjct: 93 atttcccacattcatataggtgttaatgaatctagatatatatagatgtctagattcatt 34
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| || | ||||||||||| ||||||||||||
Sbjct: 33 aacacctatatgaatgtggaaaatgctagaat 2
Score = 48.1 bits (24), Expect = 2e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 48 tatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||| |||| |||||||| || | ||||||||||| |||||| ||||||
Sbjct: 50 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaat 101
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 71.9 bits (36), Expect = 1e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaat 100
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 69.9 bits (35), Expect = 6e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 76 attcattaacatcaatatgaatgtgagaaatgctagaat 114
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||||||||| |||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatg 61
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 6e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||||||||||||||||| |||||||||||||
Sbjct: 70 attcattaccatcaatatgaatgtgggaaatgctagaat 32
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 65 attaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||||||||||| |||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaat 110
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatg 61
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 102 atttcccacattcatattgatg 81
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 69.9 bits (35), Expect = 6e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgagaaatgctagaat 108
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 63 tcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| ||||||||||||||||||||||||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaat 32
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 6e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
||||| ||||||||||||||||| ||||| || | || ||||||||||| ||||||||||
Sbjct: 69 atctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatgctag 128
Query: 97 aat 99
|||
Sbjct: 129 aat 131
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 69.9 bits (35), Expect = 6e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 53 atgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||| |||||||| |||||||||||||||| |||||||||||||
Sbjct: 78 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaat 32
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| |||||||||||||||| |||||||||||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaatgctagaat 122
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 69.9 bits (35), Expect = 6e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||| |||||||| |||||||||||||||||||||| |||||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaat 32
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 74 aatatgaatgtgagaaatgctagaat 99
||||||||||||||||||||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaat 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 tagtatttcccacattcatattgatg 30
||||||||| ||||||||||||||||
Sbjct: 36 tagtatttctcacattcatattgatg 61
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 69.9 bits (35), Expect = 6e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| | ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 82 atatatatatatattcattaacagcaatatgaatgtgagaaatgctagaat 32
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 67.9 bits (34), Expect = 2e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 50 tatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||||| ||||||| ||| ||||||||||||||||||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaat 111
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
||||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaat 32
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 67.9 bits (34), Expect = 2e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 62 ttcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||| ||||||||||||||||||||||||||||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaat 122
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||||||||| ||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaat 32
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 67.9 bits (34), Expect = 2e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 58 tatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 80 tatattcattaacatcaatatgaatgtgggaaatgctagaat 121
Score = 65.9 bits (33), Expect = 9e-11
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||||| |||||||| ||| ||||| |||||| |||||||||||||
Sbjct: 84 atatatatgtctagattcattaacattaatataaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 9e-11
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||||| |||||||| |||| ||||||||||| | |||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaat 105
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 65.9 bits (33), Expect = 9e-11
Identities = 79/92 (85%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | |||| ||||||||| |||| ||| | |||||||
Sbjct: 40 atttcccacattcatattgatgttaatgaatctagataggcatat--gtccagattcatt 97
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||| || ||| |||||||||||||
Sbjct: 98 aacatcaatataaacgtgggaaatgctagaat 129
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| |||||||||||||||| |||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 9e-11
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 13 cccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattacca 71
|||||||||| || |||| | |||| |||||||| |||| | |||||| |||||||| ||
Sbjct: 119 cccacattcacatagatgttaatgaatctagatatatatgtgtgtctagattcattaaca 60
Query: 72 tcaatatgaatgtgagaaatgctag 96
|| ||||||||||||| ||||||||
Sbjct: 59 tctatatgaatgtgagcaatgctag 35
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 65.9 bits (33), Expect = 9e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 51 atatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| || |||||||| |||||||||||||||| |||||||||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaat 113
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 65 attaccatcaatatgaatgtgagaaatgctagaat 99
|||| ||| |||||||||||| |||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 105 atttcccacattcatattgatg 84
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaat 32
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 52 tatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| ||||||| |||||||||||||||| |||||||||||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaat 119
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||||||||| ||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 111 atttcccacattcatattgatg 90
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
||||||||||||| |||||||| |||| ||||||||||| | ||||||||||
Sbjct: 79 atatatatgtctagattcattagcatctatatgaatgtgggcaatgctagaa 130
Score = 54.0 bits (27), Expect = 3e-07
Identities = 73/87 (83%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 13 cccacattcatattgatgctgatg-atctagatagatatatatgtctatattcattacca 71
||||||||||||| |||||| ||| ||||||| | |||||| ||| || ||||||| ||
Sbjct: 119 cccacattcatatagatgctaatgaatctagacatatatatgtgtataggttcattaaca 60
Query: 72 tcaatatgaatgtgagaaatgctagaa 98
|| |||||| |||| | ||||||||||
Sbjct: 59 tctatatgattgtgggcaatgctagaa 33
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 44 tagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||| | |||| || ||||| |||||||||||||||| |||||||||||||
Sbjct: 63 tagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaat 118
Score = 58.0 bits (29), Expect = 2e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatat 52
|||||||||||||||||||||| | ||| ||||||||||||||||
Sbjct: 110 atttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 64 cattaccatcaatatgaatgtgagaaatgctagaat 99
||||| |||||||||||||||| |||||||||||||
Sbjct: 41 cattaacatcaatatgaatgtgggaaatgctagaat 6
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 14 atttcccacattcatattgatg 35
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 63.9 bits (32), Expect = 4e-10
Identities = 53/59 (89%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgcta 95
|||||||||||||| ||||||| |||||||| ||||||||||||| || |||||||||
Sbjct: 62 atctagatagatat--atgtctagattcattaacatcaatatgaatatgggaaatgcta 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatg 30
||||||| |||||||| |||||||||||||
Sbjct: 122 attttagcatttcccatattcatattgatg 93
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 13 cccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattacca 71
||||||||||||| |||| | |||| |||||| | |||| | |||||| |||||||| ||
Sbjct: 119 cccacattcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaaca 60
Query: 72 tcaatatgaatgtgagaaatgcta 95
|| ||||||||||||| |||||||
Sbjct: 59 tctatatgaatgtgaggaatgcta 36
Score = 60.0 bits (30), Expect = 6e-09
Identities = 82/98 (83%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 2 ttttagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtctat 60
|||||| ||| | ||||||||||| |||| | |||| |||||| | | |||||| ||||
Sbjct: 33 ttttagcattcctcacattcatatagatgttaatgaatctagacacacatatatttctag 92
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||||| |||| ||||||||||| | ||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 48 tatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||||||| |||||||| || |||||||||||| |||||||||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaat 108
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 74 aatatgaatgtgagaaatgctagaat 99
|||||||||||| |||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 13 cccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattacca 71
||||||||||||| |||| | |||| |||||| | |||| | |||||| |||||||| ||
Sbjct: 44 cccacattcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaaca 103
Query: 72 tcaatatgaatgtgagaaatgcta 95
|| ||||||||||||| |||||||
Sbjct: 104 tctatatgaatgtgagcaatgcta 127
Score = 60.0 bits (30), Expect = 6e-09
Identities = 82/98 (83%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 2 ttttagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtctat 60
|||||| ||| | ||||||||||| |||| | |||| |||||| | | |||||| ||||
Sbjct: 130 ttttagcattgctcacattcatatagatgttaatgaatctagacacacatatatttctag 71
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||||| |||| ||||||||||| | ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaa 33
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
||||||||||||| || |||||||||||||
Sbjct: 86 catcaatatgaatatgggaaatgctagaat 115
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||||||||| |||||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctagaat 32
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||||||||| |||||||||||||
Sbjct: 73 attcattagcatcaatatgaatgtgggaaatgctagaat 111
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga 37
|||||||||||||||||||||||| ||||
Sbjct: 40 atttcccacattcatattgatgctaatga 68
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga 37
|||||||||||||||||||||||| ||||
Sbjct: 103 atttcccacattcatattgatgctaatga 75
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||||||||| |||||||||||||
Sbjct: 44 attcattagcatcaatatgaatgtgggaaatgctagaat 6
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||||||||| |||||||||||||
Sbjct: 47 attcattagcatcaatatgaatgtgggaaatgctagaat 85
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga 37
|||||||||||||||||||||||| ||||
Sbjct: 14 atttcccacattcatattgatgctaatga 42
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga 37
|||||||||||||||||||||||| ||||
Sbjct: 77 atttcccacattcatattgatgctaatga 49
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||||||||| |||||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtgggaaatgctagaat 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 95 atttcccacattcatattgatg 74
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 61.9 bits (31), Expect = 1e-09
Identities = 74/87 (85%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 13 cccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattacca 71
||||||||||||| ||| | |||| |||||||| |||||| || ||| |||||||| ||
Sbjct: 20 cccacattcatatatatgttaatgaatctagatatatatatgtgcctagattcattaaca 79
Query: 72 tcaatatgaatgtgagaaatgctagaa 98
|| ||||||||||| | ||||||||||
Sbjct: 80 tctatatgaatgtgggcaatgctagaa 106
Score = 54.0 bits (27), Expect = 3e-07
Identities = 73/87 (83%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 13 cccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattacca 71
||||||||||||| |||| | |||| ||||| | |||||||| |||| |||||||| ||
Sbjct: 95 cccacattcatatagatgttaatgaatctaggcacatatatatatctagattcattaaca 36
Query: 72 tcaatatgaatgtgagaaatgctagaa 98
| ||||||||||| | ||||||||||
Sbjct: 35 tatatatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 61.9 bits (31), Expect = 1e-09
Identities = 74/87 (85%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 13 cccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattacca 71
||||||||||||| |||| | |||| |||||| | ||||||||||||| ||||||| ||
Sbjct: 20 cccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttaca 79
Query: 72 tcaatatgaatgtgagaaatgctagaa 98
|| ||||||||||| | |||||||||
Sbjct: 80 tctatatgaatgtgtgtgatgctagaa 106
Score = 52.0 bits (26), Expect = 1e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
||||||| | |||||| |||||| |||||||| |||| ||||||||||| | |||||||
Sbjct: 70 atctagacatatatatgtgtctagattcattaacatctatatgaatgtgggtgatgctag 11
Query: 97 aa 98
||
Sbjct: 10 aa 9
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 54 tgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| |||||||| ||||||||||||| || |||||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaat 112
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 50 tatatgtctatattcattaccatcaatatgaatgtgagaaatgcta 95
|||||||||| |||||||| ||||||||| ||| ||||||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgcta 36
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatgct 32
||||||| |||| |||||||||||||||||||
Sbjct: 112 attttagcattttccacattcatattgatgct 81
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 6e-09
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 5 tagtatttcccacattcatattgatgctgatgatc-tagatagatatatatgtctatatt 63
||||||| |||| |||||||| |||| | |||| | |||||| ||| ||||||||| |||
Sbjct: 36 tagtattgcccatattcatatagatgttaatgaacctagatatatacatatgtctagatt 95
Query: 64 cattaccatcaatatgaatgtg 85
||||| |||| |||||||||||
Sbjct: 96 cattaacatctatatgaatgtg 117
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatg 92
||||||||||||| ||||||| |||||||||||||||| ||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatg 92
||||||||||||| ||| |||| |||||||||||||||| ||||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga 37
|||||||||||||||||||||||| ||||
Sbjct: 6 atttcccacattcatattgatgctaatga 34
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgct 32
||||||||||||||||||||||||
Sbjct: 111 atttcccacattcatattgatgct 88
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 54 tgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| ||||||| |||||||||||||||| |||||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaat 32
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
|||||||||||||||| |||||||||||||
Sbjct: 79 catcaatatgaatgtgggaaatgctagaat 108
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatg 61
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 100 atttcccacattcatattgatg 79
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 54 tgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| |||||||| ||||||||||||| || |||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaat 32
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 54 tgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| ||||||| |||||||||||||||| |||||||||||||
Sbjct: 80 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaat 125
Score = 54.0 bits (27), Expect = 3e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 53 atgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||| ||||||| |||||||||||||||| |||||| ||||||
Sbjct: 78 atgtctagattcattgacatcaatatgaatgtgggaaatgatagaat 32
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 6e-09
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 5 tagtatttcccacattcatattgatgctgatgatc-tagatagatatatatgtctatatt 63
||||||| |||| |||||||| |||| | |||| | |||||| ||| ||||||||| |||
Sbjct: 127 tagtattgcccatattcatatagatgttaatgaacctagatatatacatatgtctagatt 68
Query: 64 cattaccatcaatatgaatgtg 85
||||| |||| |||||||||||
Sbjct: 67 cattaacatctatatgaatgtg 46
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 62 ttcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||| |||||||||||||||| |||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatg 61
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
||||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaat 32
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 54 tgtctatattcattaccatcaatatgaatgtgagaaat 91
|||||| |||||||| ||||||||||||||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaat 112
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatg 30
||||||||||||| ||||||||||||||||
Sbjct: 120 attttagtatttctcacattcatattgatg 91
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 60.0 bits (30), Expect = 6e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 50 tatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||||| |||||||| |||||||||||||||| ||||| ||||||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaat 112
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 51 atatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| || |||||||| |||||||||||||||| ||||||||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaat 113
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 65 attaccatcaatatgaatgtgagaaatgctagaat 99
|||| ||| |||||||||||| |||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 50 tatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||||||| |||||||| |||| ||||||||||| | ||||||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaa 33
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 58.0 bits (29), Expect = 2e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||||| |||||||| ||| | |||||||||| ||||||| |||||
Sbjct: 84 atatatatgtctaaattcattaacatgagtatgaatgtgggaaatgccagaat 32
Score = 58.0 bits (29), Expect = 2e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||| |||||||| ||| | ||||||||||| ||||||||||||
Sbjct: 77 atatatatatctagattcattaacatgagtatgaatgtgaaaaatgctagaat 129
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||||| || |||||||| |||| ||||||||||| ||||||||||||
Sbjct: 79 atatatatgtttaaattcattagcatctatatgaatgtggaaaatgctagaat 131
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 attttagtatttcccacattcatattgatgctgatga 37
||||||| |||||||||||||||||||||||| ||||
Sbjct: 32 attttagcatttcccacattcatattgatgctaatga 68
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgcta 95
|||||||| |||||||||||||||| |||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgcta 36
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 3 tttagtatttcccacattcatattgatgct 32
||||| ||||||||||||||||||||||||
Sbjct: 113 tttagcatttcccacattcatattgatgct 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 64 cattaccatcaatatgaatgtgagaaatgcta 95
||||| |||||||||||||||| |||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgcta 111
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatgctgatga 37
||||||| |||||||||||||||||||||||| ||||
Sbjct: 116 attttagcatttcccacattcatattgatgctaatga 80
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgcta 95
|||||||| |||||||||||||||| |||||||||
Sbjct: 78 attcattagcatcaatatgaatgtgggaaatgcta 112
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tttagtatttcccacattcatattgatgct 32
||||| ||||||||||||||||||||||||
Sbjct: 35 tttagcatttcccacattcatattgatgct 64
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 64 cattaccatcaatatgaatgtgagaaatgcta 95
||||| |||||||||||||||| |||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgcta 37
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 51 atatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| || |||||||| |||||||||||||||| |||||| ||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatg 61
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 51 atatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||| |||||||| ||||||||||||||| |||||||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaat 88
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatgctgatga 37
||||||| |||||||||||||||||||||||| ||||
Sbjct: 87 attttagcatttcccacattcatattgatgctaatga 51
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgcta 95
|||||||| |||||||||||||||| |||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgcta 83
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 77 atgaatgtgagaaatgctagaat 99
|||||||||||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaat 32
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 56.0 bits (28), Expect = 9e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
||||||||||||| |||||||| |||| ||||||||||| | |||| |||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 110
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||||||||||||||| |||||||||||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaat 96
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||| |||||||||||| |||||||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaat 105
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 71 atcaatatgaatgtgagaaatgctagaat 99
||||||||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatg-atctagata 45
|||||||||||||||||| ||||| ||| |||||||||
Sbjct: 97 atttcccacattcatattaatgctaatgaatctagata 60
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 64 cattaccatcaatatgaatgtgagaaatgctagaat 99
||||| |||||||||||||||| |||||||||||||
Sbjct: 84 cattaacatcaatatgaatgtgggaaatgctagaat 119
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 64 cattaccatcaatatgaatgtgagaaatgctagaat 99
||||| |||||||||||||||| ||||||||||||
Sbjct: 67 cattaacatcaatatgaatgtggaaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 111 atttcccacattcatattgatg 90
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 9e-08
Identities = 81/96 (84%), Gaps = 7/96 (7%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatgctgatga-tctagatagatatatatgtcta 59
||||||| |||| ||||||| ||||||||||| |||| |||||| ||||||| |||
Sbjct: 125 attttagcattttccacatttatattgatgctaatgaatctaga--gatatat----cta 72
Query: 60 tattcattaccatcaatatgaatgtgagaaatgcta 95
|||||||| ||||||| | ||||||||||||||||
Sbjct: 71 aattcattagcatcaatgtaaatgtgagaaatgcta 36
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaat 82
||||||||||||| |||||||| |||||||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaat 88
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||| |||||||||||| |||||||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaat 32
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 atcaatatgaatgtgagaaatgctagaat 99
||||||||||||||| |||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaat 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatg-atctagata 45
|||||||||||||||||| ||||| ||| |||||||||
Sbjct: 40 atttcccacattcatattaatgctaatgaatctagata 77
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 56.0 bits (28), Expect = 9e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
||||||||||||| |||||||| ||| ||||||||||| | ||||||||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaa 104
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| |||||||||||||||| |||||| ||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaat 108
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
|||||||||||||||| ||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 100 atttcccacattcatattgatg 79
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| |||||||||||||||| ||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaat 32
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||||||||||||| || |||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaat 32
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||||||||||||| || |||||||||||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaat 113
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| |||||||||||||||| |||||| ||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaat 109
Score = 54.0 bits (27), Expect = 3e-07
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatat 50
|||||||||||||||||||||| | ||| ||||||||||||||
Sbjct: 101 atttcccacattcatattgatgttaatgaatctagatagatat 59
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaat 103
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 65 attaccatcaatatgaatgtgagaaatgctagaat 99
|||| ||||||||| ||||||||||||||||||||
Sbjct: 66 attaacatcaatataaatgtgagaaatgctagaat 32
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 55 gtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||| |||||||| ||||||||||||| || ||||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaat 118
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 54.0 bits (27), Expect = 3e-07
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatat 50
|||||||||||||||||||||| | ||| ||||||||||||||
Sbjct: 41 atttcccacattcatattgatgttaatgaatctagatagatat 83
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctaga 97
|||| |||||||| |||||||||||||||| |||||| ||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttaga 35
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 54 tgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
|||||| ||||||| |||||||||||||||| ||||||||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatgctag 88
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 53 atgtctatattcattaccatcaatatgaatgtgagaaatg 92
||||||| ||||||| |||||||||||||||| ||||||
Sbjct: 44 atgtctagattcattgacatcaatatgaatgtgggaaatg 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 6 atttcccacattcatattgatg 27
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 83 atttcccacattcatattgatg 62
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||||| ||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatatgagaaatgctagaat 99
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 3e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgcta 95
||||||||| | | |||||| || ||||||||||||| ||||||||||| | |||||||
Sbjct: 69 atctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatgcta 127
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||| ||||||||||| |||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 3e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
||||||||| | | |||| |||| |||||||| |||| ||||||||||||| | ||||||
Sbjct: 94 atctagatatagacatatatctagattcattaacatccatatgaatgtgagcattgctag 35
Query: 97 aat 99
|||
Sbjct: 34 aat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 71/86 (82%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 15 cacattcatattgatgctgatga-tctagatagatatatatgtctatattcattaccatc 73
||||||||||| |||| | |||| |||||||| || | ||| |||| |||||||| ||||
Sbjct: 46 cacattcatatggatgttaatgaatctagatatatgtctatatctagattcattaacatc 105
Query: 74 aatatgaatgtgagaaatgctagaat 99
|||||||| | | |||||||||||
Sbjct: 106 tatatgaatataggcaatgctagaat 131
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| ||||||||||||||| |||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaat 87
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa
Japonica Group
Length = 148
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| | |||||||||||||||| |||||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaat 32
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
|||||||||||||||| |||||||||||||
Sbjct: 88 catcaatatgaatgtgggaaatgctagaat 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatg 61
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 109 atttcccacattcatattgatg 88
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 54.0 bits (27), Expect = 3e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||| |||||||| | |||||||||||| |||||||||||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaat 103
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 75 atatgaatgtgagaaatgctagaat 99
|||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaat 32
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 54.0 bits (27), Expect = 3e-07
Identities = 75/89 (84%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||||||| ||||||||||| | |||| |||||||||||||| |||| |||||||
Sbjct: 6 atttcccacgttcatattgatattaatgaatctagatagatataa---tctagattcatt 62
Query: 68 accatcaatatgaatgtgagaaatgctag 96
| ||||||||||| ||| ||||||||||
Sbjct: 63 aatatcaatatgaacgtgggaaatgctag 91
Score = 46.1 bits (23), Expect = 8e-05
Identities = 74/89 (83%), Gaps = 4/89 (4%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||||||| ||||||||||| | |||| ||||||| ||||| | |||| |||||||
Sbjct: 86 atttcccacgttcatattgatattaatgaatctagat---tatatctatctagattcatt 30
Query: 68 accatcaatatgaatgtgagaaatgctag 96
| ||||||||||| ||| ||||||||||
Sbjct: 29 aatatcaatatgaacgtgggaaatgctag 1
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||||||||| || ||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggatatgctagaat 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
|||||||||||||||| ||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaat 32
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgcta 95
|||||||| |||||||||||||||| |||||||||
Sbjct: 69 attcattaacatcaatatgaatgtgggaaatgcta 103
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatg 30
||||||| ||||||||||||||||||||||
Sbjct: 107 attttagcatttcccacattcatattgatg 78
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 54.0 bits (27), Expect = 3e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||| | |||||||| |||| ||||||||||| | |||||||||||
Sbjct: 82 atatatgtccagattcattaacatctatatgaatgtgggcaatgctagaat 32
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 58 tatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||| |||||||||||||| |||||||||||||
Sbjct: 58 tatattcattaatatcaatatgaatgttggaaatgctagaat 99
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 attttagtatttcccacattcatattgatg 30
||||||| ||||||||||||||||||||||
Sbjct: 32 attttagcatttcccacattcatattgatg 61
Score = 52.0 bits (26), Expect = 1e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 42 gatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| || | |||| ||| |||| ||||||||| ||| ||||||||||||||||
Sbjct: 61 gatagatagatctatctagatttattaacatcaatataaatatgagaaatgctagaat 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgcta 95
|||||||||||||||| |||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgcta 36
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatatt 26
||||||||||||||||||||||||||
Sbjct: 82 attttagtatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 1e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
||||||||||| |||||||| |||| ||||||||||| | ||| ||||||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatgtgggcaatactagaa 130
Score = 46.1 bits (23), Expect = 8e-05
Identities = 66/79 (83%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 5 tagtatttcccacattcatattgatgctgatg-atctagatagatatatatgtctatatt 63
||||||| ||||||||||||| |||| | ||| ||||||| | |||| |||||| |||
Sbjct: 127 tagtattgcccacattcatatagatgttaatgaatctagacatatatgcgtgtctaaatt 68
Query: 64 cattaccatcaatatgaat 82
||||| |||| ||||||||
Sbjct: 67 cattaacatctatatgaat 49
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 44 tagatatatatgtctatattcattaccatcaatatgaatgtg 85
|||||||||||||||| |||||||| ||| |||||||||||
Sbjct: 53 tagatatatatgtctagattcattaacatatatatgaatgtg 12
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
||||||||| ||||||||||||||||||||
Sbjct: 37 catcaatataaatgtgagaaatgctagaat 66
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
|||||||||||||||||||||| |||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 tagtatttcccacattcatattgatg 30
||||||||| ||||||||||||||||
Sbjct: 36 tagtatttctcacattcatattgatg 61
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 52.0 bits (26), Expect = 1e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
||||||| ||| |||||||| |||| ||||||||||| | ||||||||||
Sbjct: 57 atatatgcctagattcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 attttagtatttcccacattcatattgatg 30
|||||||||||| |||||||||||||||||
Sbjct: 32 attttagtattttccacattcatattgatg 61
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
|||||||||||||||| |||||||||||||
Sbjct: 76 catcaatatgaatgtgggaaatgctagaat 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 97 atttcccacattcatattgatg 76
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 1e-06
Identities = 72/86 (83%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 15 cacattcatattgatgctgatga-tctagatagatatatatgtctatattcattaccatc 73
||||||||||| |||| | |||| |||||||| || | |||||||| |||||||| ||||
Sbjct: 117 cacattcatatggatgttaatgaatctagatatatgtctatgtctagattcattaacatc 58
Query: 74 aatatgaatgtgagaaatgctagaat 99
|||||||| | | |||||||||||
Sbjct: 57 tatatgaatataggcaatgctagaat 32
Score = 50.1 bits (25), Expect = 5e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 51 atatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||| |||||||| |||| ||||||||||||| | |||||||||
Sbjct: 83 atatatctagattcattaacatccatatgaatgtgagcattgctagaat 131
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 53 atgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
||||||| |||||||| |||| ||||||||||| | ||||||||||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaa 98
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatg 30
|||||||||||| |||||||||||||||||
Sbjct: 103 attttagtattttccacattcatattgatg 74
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 attttagtatttcccacattcatattgatg 30
||||| |||||| |||||||||||||||||
Sbjct: 32 atttttgtattttccacattcatattgatg 61
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 54 tgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||| |||||||| |||| ||||||||||| | ||||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 33
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 54 tgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||| |||||||| |||| ||||||||||| | ||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaa 33
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatg 92
|||| |||||||| |||||||||||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatg 39
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatg 61
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 50.1 bits (25), Expect = 5e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgcta 95
|||||||||||| |||||||| |||| | ||||||||| |||||||||
Sbjct: 84 atatatatgtcttgattcattaacatctacatgaatgtgggaaatgcta 36
Score = 50.1 bits (25), Expect = 5e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgcta 95
||||||||| || |||||||| |||| |||||||||||| ||||||||
Sbjct: 77 atatatatgcatagattcattaacatctatatgaatgtgaaaaatgcta 125
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtg 85
|||||| |||| |||||||| ||||||||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtg 89
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 55 gtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||| |||||||| ||||||||||||| || ||||| |||||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaat 109
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 tagtatttcccacattcatattgatgctgatga 37
|||||||||||| ||||||||||||||| ||||
Sbjct: 105 tagtatttcccatattcatattgatgctaatga 73
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
||||||||||||| |||||||| |||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaat 32
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 atcaatatgaatgtgagaaatgctagaat 99
||||||||||||||| |||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaat 109
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatg 92
|||| |||||||| |||||||||||||||| ||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatg 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 111 atttcccacattcatattgatg 90
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 atcaatatgaatgtgagaaatgctagaat 99
||||||||||||||| |||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaat 109
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 50.1 bits (25), Expect = 5e-06
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 5 tagtatttcccacattcatattgatgctgatga-tctagatagatatatatgt 56
||||||||| || ||| ||||||||| | |||| |||||||||||||||||||
Sbjct: 36 tagtatttctcatatttatattgatgataatgaatctagatagatatatatgt 88
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 63 tcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| |||| ||||||||||| |||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaat 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
|||| ||||||||||| |||||||||||||
Sbjct: 61 catcgatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 71 atcaatatgaatgtgagaaatgctagaat 99
||||||||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaat 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 tcaatatgaatgtgagaaatgctagaat 99
|||||||||||||| |||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaat 88
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 51 atatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
|||| |||| |||||||| |||| ||||||||||| | ||||||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||||| |||||||||| ||||||||||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 70 catcaatatgaatgtgagaaatgcta 95
|||||||||||||||| |||||||||
Sbjct: 82 catcaatatgaatgtgggaaatgcta 107
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 103 atttcccacattcatattgatg 82
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 48.1 bits (24), Expect = 2e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
||||||||||||| |||||||| |||| | ||||||||| ||||||||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaa 33
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
||||| ||||||| |||||||| |||| ||||||||||| ||||||||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtggacaatgctagaa 104
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 49 atatatgtctatattcattaccatcaatatgaatgt 84
||||||||||| |||||||| |||| ||||||||||
Sbjct: 82 atatatgtctagattcattaacatctatatgaatgt 47
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 56 tctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||| |||||||| ||||||||||||||| ||||||||||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaat 119
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 72/87 (82%), Gaps = 7/87 (8%)
Strand = Plus / Minus
Query: 14 ccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattaccat 72
||||||||||||||||| | |||| | |||||||||| ||||||||| || |||
Sbjct: 112 ccacattcatattgatgttaatgagtttagatagatacatatgtctagat------acat 59
Query: 73 caatatgaatgtgagaaatgctagaat 99
||||||||||||| ||||||||||||
Sbjct: 58 caatatgaatgtggaaaatgctagaat 32
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 51 atatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
||||||||| ||| |||| |||| ||||||||||| | ||||||||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 51 atatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
|||| |||| |||||||| |||| ||||||||||| | ||||||||||
Sbjct: 84 atatatctagattcattaacatctatatgaatgtgggcaatgctagaa 131
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 64 cattaccatcaatatgaatgtgagaaatgctagaat 99
||||| ||| ||||| ||||||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaat 32
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 48 tatatatgtctatattcattaccatcaatatgaatgtgagaaatgcta 95
|||| ||||||| ||| |||| ||||||||||||| || |||||||||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgcta 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatg 30
||||||| |||||||| |||||||||||||
Sbjct: 109 attttagcatttcccatattcatattgatg 80
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 tcaatatgaatgtgagaaatgctagaat 99
|||||||||||||| |||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaat 87
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 8e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 52 tatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||||| |||||||| ||| ||||||||||| | ||||||||||
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaa 98
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 46.1 bits (23), Expect = 8e-05
Identities = 72/87 (82%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 13 cccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattacca 71
||||||||||||| ||||| |||| |||||| | |||| | || ||| |||||||| ||
Sbjct: 98 cccacattcatatagatgcaaatgaatctagacatatatgtgtgcctagattcattagca 39
Query: 72 tcaatatgaatgtgagaaatgctagaa 98
| ||||||||||| | ||||||||||
Sbjct: 38 tagatatgaatgtgggcaatgctagaa 12
Score = 46.1 bits (23), Expect = 8e-05
Identities = 72/87 (82%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 13 cccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattacca 71
||||||||||||| ||||| |||| ||||| | | ||||||||||| ||||||| ||
Sbjct: 23 cccacattcatatctatgctaatgaatctaggcacacatatatgtctagattcatttgca 82
Query: 72 tcaatatgaatgtgagaaatgctagaa 98
|| ||||||||||| | |||| |||||
Sbjct: 83 tctatatgaatgtgggcaatgttagaa 109
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 46.1 bits (23), Expect = 8e-05
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||| |||||| ||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaat 32
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||||||||| |||| ||||| ||||||
Sbjct: 66 attcattagcatcaatatgaacgtgaaaaatgatagaat 104
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 8e-05
Identities = 72/87 (82%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 13 cccacattcatattgatgctgatga-tctagatagatatatatgtctatattcattacca 71
||||||||||||| |||||| || | |||| ||| ||| ||||||| |||||||| ||
Sbjct: 44 cccacattcatatagatgctaataaatctatatatataataatgtctagattcattagca 103
Query: 72 tcaatatgaatgtgagaaatgctagaa 98
|| ||||||||||| | |||| |||||
Sbjct: 104 tctatatgaatgtgggcaatgttagaa 130
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| ||||||||||||| || ||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaat 32
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 65 attaccatcaatatgaatgtgagaaatgctagaat 99
|||| ||||| ||||||||||| ||||||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 tagtatttcccacattcatattgatg 30
|||||||||||||||||||| |||||
Sbjct: 113 tagtatttcccacattcatagtgatg 88
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| |||||| |||||||| |||||||||||||
Sbjct: 70 attcattaatatcaatgtgaatgtgggaaatgctagaat 108
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 tatttcccacattcatattgatg 30
|||||||||||||||||||||||
Sbjct: 39 tatttcccacattcatattgatg 61
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 62 ttcattaccatcaatatgaatgtgagaaat 91
||||||| |||||||||||||||| |||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaat 40
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 tagtatttcccacattcatattgatg 30
|||||||||||||||| |||||||||
Sbjct: 120 tagtatttcccacatttatattgatg 95
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||| ||||||||| || |||| ||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaat 104
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||||| |||| ||||||||||| | ||||||||||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 54 tgtctatattcattaccatcaatatgaatgtgagaaatgcta 95
|||||| |||||||| |||| ||||||||||| | |||||||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgcta 111
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 51 atatgtctatattcattaccatcaatatgaatgt 84
|||||||||||||||||| |||| | ||||||||
Sbjct: 80 atatgtctatattcattaacatctaaatgaatgt 47
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 54 tgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| |||||||| |||| |||||||| || | |||||||||||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggtaatgctagaat 131
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
|||||||||||| ||| |||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaat 32
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 54 tgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| |||||||| |||| |||||||||| | |||||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgttggtaatgctagaat 32
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 49 atatatgtctatattcattaccatcaatatgaat 82
||||||||||| |||||||| |||| ||||||||
Sbjct: 81 atatatgtctagattcattaacatctatatgaat 114
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||||| |||| ||||||||||| | ||||||||||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
||||||||||||| || |||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 74 aatatgaatgtgagaaatgctagaat 99
|||||||||||| |||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaat 92
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 44.1 bits (22), Expect = 3e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 71 atcaatatgaatgtgagaaatgctagaat 99
||||||||||||||| ||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaat 98
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||||| |||| ||||||||||| | ||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
||||||| |||||||| |||||||||||||
Sbjct: 61 catcaatgtgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||||| |||| ||||||||||| | ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaa 33
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||||| |||| ||||||||||| | ||||||||||
Sbjct: 95 attcattaacatctatatgaatgtgggcaatgctagaa 132
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 attttagtatttcccacattcatattgatg 30
||||||| |||| |||||||||||||||||
Sbjct: 32 attttagcattttccacattcatattgatg 61
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 attttagtatttcccacattcatattgatg 30
||||||| |||| |||||||||||||||||
Sbjct: 101 attttagcattttccacattcatattgatg 72
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
|||||||||||||||| ||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaat 32
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 attttagtatttcccacattcatatt 26
||||||| ||||||||||||||||||
Sbjct: 32 attttagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 62 ttcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||| ||||| ||| |||||| |||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaat 94
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaa 98
|||||||| |||| ||||||||||| | ||||||||||
Sbjct: 75 attcattaacatctatatgaatgtgggcaatgctagaa 112
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 70 catcaatatgaatgtgagaaatgctagaat 99
|||| |||||||||||||||||| ||||||
Sbjct: 61 catccatatgaatgtgagaaatgttagaat 32
