miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 135 bits (68), Expect = 1e-31
Identities = 86/92 (93%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 attctagcatttcccacattcatattgatattaatgaatctagatagatatatatgtcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| |||||||||||||||| |||||
Sbjct: 71 gattcattaacatcaatataaatgtgggaaat 40
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 22 atattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataa 81
|||||||| |||||||||||||| | |||||| | ||||||||||||| |||||||| |
Sbjct: 53 atattgatgttaatgaatctagacatatatatctatctagattcattaatatcaatatga 112
Query: 82 atgtgagaaat 92
||||| |||||
Sbjct: 113 atgtgggaaat 123
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 1e-31
Identities = 86/92 (93%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 131 attctagcatttttcacattcatattgatattaatgaatctaaatagatatatatgtcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| || ||||||||||||| |||||
Sbjct: 71 gattcattaacaccaatataaatgtgggaaat 40
Score = 56.0 bits (28), Expect = 9e-08
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || ||| |||||| | |||||||||||||| | |||||| | | ||
Sbjct: 32 attctagcatttcccacatttatattggtgttaatgaatctagacatatatatctattta 91
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| |||||||| ||||||| ||||
Sbjct: 92 gattcattaatatcaatatgaatgtgaaaaat 123
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 135 bits (68), Expect = 1e-31
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 32 attctagcatttctcacattcatattgatactaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattagcatcaatataaatgtgagaaattttagaat 100
||||||||||||||||||| |||||| |||| |||||||
Sbjct: 92 gattcattagcatcaatatgaatgtggtaaatgttagaat 131
Score = 95.6 bits (48), Expect = 1e-19
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||||||||| || |||||||||||| ||||||||||||| | |||||| | ||||
Sbjct: 131 attctaacatttaccacattcatattgatgctaatgaatctagacatatatatctatcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
|||||||||| |||||||| ||||||||||||
Sbjct: 71 gattcattagtatcaatatgaatgtgagaaat 40
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 127 bits (64), Expect = 3e-29
Identities = 85/92 (92%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| ||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 6 attctagcatttctcacattcatattgatgttaatgaatctagatagatatatatgtcta 65
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| |||||| |||||
Sbjct: 66 gattcattaacatcaatatgaatgtgggaaat 97
Score = 95.6 bits (48), Expect = 1e-19
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| |||||||||||||| | |||||| | ||||
Sbjct: 105 attctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatcta 46
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| ||||||||||||
Sbjct: 45 gattcattaacatcaatatgaatgtgagaaat 14
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 3e-29
Identities = 85/92 (92%)
Strand = Plus / Minus
Query: 9 atttttcatattcatattgatattaatgaatctagatagatatatatgtctagattcatt 68
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atttttcacattcatattgattttaatgaatctagatagatatatatgtctagattcatt 64
Query: 69 agcatcaatataaatgtgagaaattttagaat 100
| |||||||| |||||| ||||| |||||||
Sbjct: 63 aatatcaatatgaatgtgggaaatgttagaat 32
Score = 95.6 bits (48), Expect = 1e-19
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||||||||| || ||||||||||||||||||||||||||| | |||||| | ||||
Sbjct: 32 attctaacatttcccacattcatattgatattaatgaatctagacatatatatctatcta 91
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| |||||||| ||||||| ||||
Sbjct: 92 gattcattaaaatcaatatgaatgtgaaaaat 123
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 127 bits (64), Expect = 3e-29
Identities = 85/92 (92%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 131 attctaacattttccacattcatattgatattaatgaatctaaatagatatatatgtcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||| ||| |||||| |||||
Sbjct: 71 gattcattaacatcactatgaatgtgggaaat 40
Score = 63.9 bits (32), Expect = 4e-10
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || ||||||| |||| |||||||||||||| | |||||| | | ||
Sbjct: 32 attctagcatttcccacattcatagtgatgttaatgaatctagacatatatatctattta 91
Query: 61 gattcattagcatcaatataaatgtgagaaattttagaat 100
||||||||| |||||||| |||||| |||| |||||||
Sbjct: 92 gattcattaatatcaatatgaatgtggaaaatgttagaat 131
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 125 bits (63), Expect = 1e-28
Identities = 78/83 (93%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 48 attcatattgatattaatgaatctagatagatatatatgtctagattcattaacatcaat 107
Query: 78 ataaatgtgagaaattttagaat 100
|| |||||| |||| |||||||
Sbjct: 108 atgaatgtggaaaatattagaat 130
Score = 85.7 bits (43), Expect = 1e-16
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
||||||| ||||| || |||||||||||| |||||||||||||| | |||||| | ||||
Sbjct: 130 attctaatattttccacattcatattgatgttaatgaatctagacatatatatctatcta 71
Query: 61 gattcattagcatcaatataaatgtgagaaa 91
||||||||| |||||||| |||||| ||||
Sbjct: 70 gattcattaatatcaatatgaatgtgggaaa 40
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 7e-27
Identities = 84/92 (91%)
Strand = Plus / Plus
Query: 9 atttttcatattcatattgatattaatgaatctagatagatatatatgtctagattcatt 68
||||| ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||
Sbjct: 40 attttccatattcatattgatgctaatgaatttagatagatatatatgtttagattcatt 99
Query: 69 agcatcaatataaatgtgagaaattttagaat 100
||||||||||| ||| |||||||| |||||||
Sbjct: 100 agcatcaatatgaatatgagaaatgttagaat 131
Score = 85.7 bits (43), Expect = 1e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||||||||| |||||||||||||||| ||||||||||| | | |||||| | ||||
Sbjct: 131 attctaacatttctcatattcatattgatgctaatgaatctaaacatatatatctatcta 72
Query: 61 gattcattagcatcaatat 79
||||||||||||||||||
Sbjct: 71 aattcattagcatcaatat 53
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 119 bits (60), Expect = 7e-27
Identities = 90/100 (90%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattagcatcaatataaatgtgagaaattttagaat 100
|||||||| ||||||||| |||||| ||||| |||||||
Sbjct: 92 cattcattaacatcaatatgaatgtgggaaatattagaat 131
Score = 79.8 bits (40), Expect = 6e-15
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
||||||| |||| || |||||||||||| ||||||||| |||| | |||||| | ||||
Sbjct: 131 attctaatatttcccacattcatattgatgttaatgaatgtagacatatatatctatcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| |||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaat 40
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 117 bits (59), Expect = 3e-26
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 49 attcatatttatgttaatgaatctagatagatatatatgtctagattcattatcatcaat 108
Query: 78 ataaatgtgagaaat 92
|||||||||| ||||
Sbjct: 109 ataaatgtgaaaaat 123
Score = 79.8 bits (40), Expect = 6e-15
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||||||| ||| |||||||| ||||||||||||| | |||||| | ||||
Sbjct: 131 attctagcatttttcacatttatattgatgataatgaatctagacatatatatctatcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||| ||||| |||||| |||||
Sbjct: 71 gattcattaacataaatatgaatgtgggaaat 40
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 83/92 (90%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgttgttaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| |||||| |||||
Sbjct: 92 gattcattaccatcaatatgaatgtgggaaat 123
Score = 69.9 bits (35), Expect = 6e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||||||| ||||||||||||| | |||||| | ||||||||||||| || ||||
Sbjct: 114 attcatattgatggtaatgaatctagacatatatatctatctagattcattaacaacaat 55
Query: 78 ataaatgtgagaaat 92
|| |||||| |||||
Sbjct: 54 atgaatgtgggaaat 40
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 111 bits (56), Expect = 2e-24
Identities = 83/92 (90%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 105 attctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtcta 46
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| |||||| |||||
Sbjct: 45 gattcattaacatcaatatgaatgtgggaaat 14
Score = 79.8 bits (40), Expect = 6e-15
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| |||||||||||||| | |||||| | | ||
Sbjct: 6 attctagcatttcccacattcatattgatgttaatgaatctagacatatatatctattta 65
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| |||||| |||||
Sbjct: 66 gattcattaacatcaatatgaatgtgggaaat 97
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 83/92 (90%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| || || ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 32 attctagcattttccacatccatattgatgttaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| || |||||| |||||| |||||
Sbjct: 92 gattcattaacaacaatatgaatgtgggaaat 123
Score = 67.9 bits (34), Expect = 2e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||||| | |||||||||||||| | |||||| | ||||||||||||| |||||||
Sbjct: 114 attcatattgttgttaatgaatctagacatatatatctatctagattcattaacatcaat 55
Query: 78 at 79
||
Sbjct: 54 at 53
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 7e-24
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| || |||| ||||||| ||||||| ||||||||||||||||||||||
Sbjct: 32 attctagcattttccacattcgtattgatgttaatgactctagatagatatatatgtcta 91
Query: 61 gattcattagcatcaatat 79
|||||||||||||||||||
Sbjct: 92 gattcattagcatcaatat 110
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| |||||||||||||| ||||||||||||| | |||||| | ||||
Sbjct: 131 attctagcattttctatattcatattgatgctaatgaatctagacatatatatctatcta 72
Query: 61 gattcattagcatcaata 78
|| |||||| ||||||||
Sbjct: 71 gagtcattaacatcaata 54
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 83/93 (89%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || ||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 32 attctagcatttcccacattcatattgacgttaatgaatctagatagatatatatttcta 91
Query: 61 gattcattagcatcaatataaatgtgagaaatt 93
||||||||| ||||||||| |||||| ||||||
Sbjct: 92 gattcattaccatcaatattaatgtgggaaatt 124
Score = 61.9 bits (31), Expect = 1e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 22 atattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataa 81
|||||||| ||||||||||||| | |||||| | ||||||||||||| | ||||||| |
Sbjct: 110 atattgatggtaatgaatctagaaatatatatctatctagattcattaacgtcaatatga 51
Query: 82 atgtgagaaat 92
||||| |||||
Sbjct: 50 atgtgggaaat 40
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| ||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 32 attctaccatttctcacattcatattgatgttaatgaatctagatagatatatatgtcta 91
Query: 61 gattcatta 69
|||||||||
Sbjct: 92 gattcatta 100
Score = 95.6 bits (48), Expect = 1e-19
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| | |||||| |||||||||||||||||||| | |||||| | ||||
Sbjct: 131 attctagcattttctaaattcatgttgatattaatgaatctagacatatatatctatcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| ||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgagaaat 40
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 114 attcatattaatgttaatgaatctagatagatatatatgtctagattcattaacatcaat 55
Query: 78 ataaatgtg 86
|| ||||||
Sbjct: 54 atgaatgtg 46
Score = 77.8 bits (39), Expect = 2e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||||||| |||||||||||||| | |||||| | ||||||||||||| ||| |||
Sbjct: 49 attcatattgatgttaatgaatctagacatatatatctatctagattcattaacattaat 108
Query: 78 ataaatgtgagaaat 92
|| |||||| |||||
Sbjct: 109 atgaatgtgggaaat 123
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 103 bits (52), Expect = 4e-22
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || ||||||| | ||||||||||||||||| ||||||||||||||
Sbjct: 32 attctagcatttcccacattcatacttatattaatgaatctagacggatatatatgtcta 91
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||| |||||||||||
Sbjct: 92 gattcattagcatcaatatggatgtgagaaat 123
Score = 52.0 bits (26), Expect = 1e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 8 catttttcatattcatattgatattaatgaatctagatagatatatatgtctagattcat 67
||||| ||| || ||||||||| ||||||||||||| | |||||| ||||||||||||
Sbjct: 124 catttctcacatccatattgatgctaatgaatctagacatatatatccgtctagattcat 65
Query: 68 ta 69
||
Sbjct: 64 ta 63
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 22 atattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataa 81
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 82 atgtgagaaat 92
||||| |||||
Sbjct: 113 atgtgggaaat 123
Score = 83.8 bits (42), Expect = 4e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
||||||||||||||||||||||||||| | |||||| | ||||||||||||| |||||||
Sbjct: 114 attcatattgatattaatgaatctagacatatatatctatctagattcattaacatcaat 55
Query: 78 at 79
||
Sbjct: 54 at 53
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 22 atattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataa 81
|||||||| |||||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct: 110 atattgatgttaatgaatctagatagaaatatatgtctagattcataaacatcaatataa 51
Query: 82 atgtgagaaat 92
||||| |||||
Sbjct: 50 atgtgggaaat 40
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 22 atattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataa 81
|||||||| || ||||||||||| | |||| | | ||||||||||||| |||||||||||
Sbjct: 53 atattgatgtttatgaatctagacatatatttctatctagattcattaacatcaatataa 112
Query: 82 atgtgagaaat 92
||||| |||||
Sbjct: 113 atgtgggaaat 123
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 7e-21
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||| |||
Sbjct: 46 catattcatatggatgttaatgaatctagttggatatatatgtctagattcattaacatt 105
Query: 75 aatataaatgtgagaaat 92
||||| ||||||||||||
Sbjct: 106 aatatgaatgtgagaaat 123
Score = 54.0 bits (27), Expect = 3e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| ||| ||||||||| || |||||||||||||| | |||||| |||
Sbjct: 131 attctagcatttctcacattcatattaatgttaatgaatctagacatatatatccaacta 72
Query: 61 gattcattagcatcaatat 79
||||||||| |||| ||||
Sbjct: 71 gattcattaacatccatat 53
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 16 atattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatca 75
|||||||||||||| |||||||||||||||||||||| ||||||| |||||||| |||||
Sbjct: 47 atattcatattgatgttaatgaatctagatagatatagatgtctatattcattaacatca 106
Query: 76 atataaatg 84
|||| ||||
Sbjct: 107 atatgaatg 115
Score = 60.0 bits (30), Expect = 6e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||||||| ||||||||| |||| | ||||| | ||||||||||||| |||||||
Sbjct: 114 attcatattgatgttaatgaatatagacatctatatctatctagattcattaacatcaat 55
Query: 78 at 79
||
Sbjct: 54 at 53
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||||| |||| || ||||||||| || |||||||||||||||| |||||||| ||||
Sbjct: 32 attctaactttttccacattcatattaatgttaatgaatctagataaatatatatatcta 91
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| |||||||| |||||| |||||
Sbjct: 92 gattcattaatatcaatatgaatgtgggaaat 123
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || ||||||||||||||||||||||||||||| |||||| | ||||
Sbjct: 131 attctagcatttcccacattcatattgatattaatgaatctagatatatatatttatcta 72
Query: 61 gattcattagcatcaatataaatgtg 86
||||||||| ||| ||||| ||||||
Sbjct: 71 gattcattaacattaatatgaatgtg 46
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 95.6 bits (48), Expect = 1e-19
Identities = 88/100 (88%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| ||| |||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 32 attctagcatttctcacattcatattgatggtaatgaatctagataga-atatatatcta 90
Query: 61 gattcattagcatcaatataaatgtgagaaattttagaat 100
||||||||| ||| ||||||||| || ||||| |||||||
Sbjct: 91 gattcattaacattaatataaatatgggaaatgttagaat 130
Score = 87.7 bits (44), Expect = 2e-17
Identities = 81/92 (88%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||||||||| |||||| ||||| || |||||||||||||||| |||| | | ||||
Sbjct: 130 attctaacatttcccatatttatattaatgttaatgaatctagatatatat-tctatcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| ||||||||||||
Sbjct: 71 gattcattaccatcaatatgaatgtgagaaat 40
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| ||||||||||||||| |||||||||||| | | |||||| | ||||
Sbjct: 32 attctagcattttccatattcatattgatgttaatgaatctatacatatatatttatcta 91
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| |||||| |||||
Sbjct: 92 gattcattaacatcaatatgaatgtgggaaat 123
Score = 93.7 bits (47), Expect = 4e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| |||||||||||||||| |||||||||| ||
Sbjct: 131 attctagcatttcccacattcatattgatgttaatgaatctagataaatatatatgtata 72
Query: 61 gattcattagcatcaatat 79
||||||||| |||||||||
Sbjct: 71 gattcattaacatcaatat 53
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 95.6 bits (48), Expect = 1e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 21 catattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatata 80
|||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 56 catagtgatgttaatgaatctagatagatatatatgtctagattcattaacatcactatg 115
Query: 81 aatgtgagaaat 92
|||||| |||||
Sbjct: 116 aatgtgggaaat 127
Score = 61.9 bits (31), Expect = 1e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || ||||||| |||| |||||||||||||| | |||||| | ||||
Sbjct: 135 attctagcatttcccacattcatagtgatgttaatgaatctagacatatatatctatcta 76
Query: 61 gattcattagcatca 75
||||||||| |||||
Sbjct: 75 gattcattaacatca 61
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 31 ttaatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtgagaa 90
||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||
Sbjct: 101 ttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaa 42
Query: 91 at 92
||
Sbjct: 41 at 40
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || ||||||||||||||||||||||||||| | |||||| | ||||
Sbjct: 32 attctatcatttcccacattcatattgatattaatgaatctagacatatatatctatcta 91
Query: 61 gattcatta 69
|||||||||
Sbjct: 92 gattcatta 100
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 21 catattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatata 80
||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 111 catattgatgctaatgaatctagatagatatatatgtctagattcattggcatcgatatg 52
Query: 81 aatgtg 86
||||||
Sbjct: 51 aatgtg 46
Score = 69.9 bits (35), Expect = 6e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| || |||||||| ||| |||||||||||| | |||||| | ||||
Sbjct: 32 attctagcattttccacattcatatcgatgccaatgaatctagacatatatatctatcta 91
Query: 61 gattcattagcatcaatat 79
|||||||||||||||||||
Sbjct: 92 gattcattagcatcaatat 110
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| || |||||||||||| |||||||||||||| ||||||||| |||
Sbjct: 131 attctagcattttccacattcatattgatgttaatgaatctagacttatatatatgccta 72
Query: 61 gattcattagcatcaatataaatgtg 86
|||||||||||||| |||| ||||||
Sbjct: 71 gattcattagcatctatatgaatgtg 46
Score = 67.9 bits (34), Expect = 2e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||| | || |||||||| ||| |||||||||||| | ||||||| |||||
Sbjct: 32 attctagcattgtccacattcatatagatgctaatgaatctaggcatatatataagtcta 91
Query: 61 gattcattagcatcaatataaatgtg 86
||||||||| ||||||||| ||||||
Sbjct: 92 gattcattaacatcaatatgaatgtg 117
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 6e-18
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 12 tttcatattcatattgatattaatgaatctagatagatatatatgtctagattcattagc 71
||||| ||| |||||||| ||||| |||||| |||||||||||||||||||||||||| |
Sbjct: 120 tttcacatttatattgatgttaataaatctatatagatatatatgtctagattcattaac 61
Query: 72 atcaatataaatgtgagaaat 92
|||||||| ||| || |||||
Sbjct: 60 atcaatatgaatatgggaaat 40
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||||||||||||| |||||||||||||| | |||||| | | |||||| |||| ||||
Sbjct: 46 catattcatattgatgttaatgaatctagacatatatatctatatagatttattaacatc 105
Query: 75 aatataaatgtga 87
|||||||||||||
Sbjct: 106 aatataaatgtga 118
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 6e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 8 catttttcatattcatattgatattaatgaatctagatagatatatatgtctagattcat 67
|||||| || ||||||||| |||||||| ||| ||| || ||||||||||||||||||||
Sbjct: 39 cattttccacattcatatttatattaataaatttagctaaatatatatgtctagattcat 98
Query: 68 tagcatcaatataaatgtgagaaat 92
|| ||||||||| |||||| |||||
Sbjct: 99 taacatcaatatgaatgtgggaaat 123
Score = 50.1 bits (25), Expect = 5e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatat 53
|||||| ||||| || |||||||||||| |||||||||||||| | ||||||
Sbjct: 131 attctagcatttcccacattcatattgatgttaatgaatctagacatatatat 79
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 6e-18
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 12 tttcatattcatattgatattaatgaatctagatagatatatatgtctagattcattagc 71
||||| ||| |||||||| ||||| |||||| |||||||||||||||||||||||||| |
Sbjct: 41 tttcacatttatattgatgttaataaatctatatagatatatatgtctagattcattaac 100
Query: 72 atcaatataaatgtgagaaat 92
|||||||| ||| || |||||
Sbjct: 101 atcaatatgaatatgggaaat 121
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||||||||||||| |||||||||||||| | |||||| | | |||||| |||| ||||
Sbjct: 115 catattcatattgatgttaatgaatctagacatatatatctatatagatttattaacatc 56
Query: 75 aatataaatgtga 87
|||||||||||||
Sbjct: 55 aatataaatgtga 43
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 6e-18
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 49 attcatattagtgttaatgaatctagatagatatatatgtctagattcattaacattaat 108
Query: 78 ataaatgtg 86
|| ||||||
Sbjct: 109 atgaatgtg 117
Score = 63.9 bits (32), Expect = 4e-10
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||| | || ||||||||| || |||||||||||||| | |||||| | ||||
Sbjct: 131 attctagcattctccacattcatattaatgttaatgaatctagacatatatatctatcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| || ||||| |||||| |||||
Sbjct: 71 gattcattaacactaatatgaatgtgggaaat 40
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 6e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 14 tcatattcatattgatattaatgaatctagatagatatatatgtctagattcattagcat 73
|||||||||||| ||| |||||||||||||| | |||||||||||||||||||||| |||
Sbjct: 118 tcatattcatatagatgttaatgaatctagacacatatatatgtctagattcattaacat 59
Query: 74 caatataaatgtg 86
| |||| ||||||
Sbjct: 58 ctatatgaatgtg 46
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||| | |||||| ||||||||||||||| |||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatatatatgtgtctagattcattaacatctat 108
Query: 78 ataaatgtgag 88
|| ||| ||||
Sbjct: 109 atgaatatgag 119
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 87.7 bits (44), Expect = 2e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 37 aatctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaat 40
Score = 71.9 bits (36), Expect = 1e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| |||||||||||||||| |||||||||||||| | |||||| | ||||
Sbjct: 32 attctagcatttctcatattcatattgatgttaatgaatctagacatatatatctatcta 91
Query: 61 gatt 64
||||
Sbjct: 92 gatt 95
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 4e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 9 atttttcatattcatattgatattaatgaatctagatagatatatatgtctagattcatt 68
|||||||| || ||||| ||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 123 atttttcacatccatatcgatgctaatgaatctagataaatatatatgtctagattcatt 64
Query: 69 agcatcaatataaatgtg 86
||||| |||| ||||||
Sbjct: 63 ggcatcgatatgaatgtg 46
Score = 63.9 bits (32), Expect = 4e-10
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| || |||||||| ||| |||||||||||| | |||||| | ||||
Sbjct: 32 attctagcattttccacattcatatcgatgccaatgaatctagacatatatatttatcta 91
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
|||||||||||||| |||| |||||| ||||
Sbjct: 92 gattcattagcatcgatatggatgtgaaaaat 123
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 81.8 bits (41), Expect = 2e-15
Identities = 67/75 (89%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
||||||||||||| ||||||||||||||||||||| |||||||| |||| ||||||||
Sbjct: 49 attcatattgatactaatgaatctagatagatata---gtctagatccattggcatcaat 105
Query: 78 ataaatgtgagaaat 92
|| |||||| |||||
Sbjct: 106 atgaatgtgggaaat 120
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||| |||||||| |||||| |||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaat 40
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 80/92 (86%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| | |||||||||||| ||||||||| |||| | ||||||||||||
Sbjct: 32 attctagcattttctacattcatattgatgttaatgaatgtagaca--tatatatgtcta 89
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| |||||| |||||
Sbjct: 90 gattcattaacatcaatatgaatgtgggaaat 121
Score = 75.8 bits (38), Expect = 9e-14
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 129 attctagcatttcccacattcatattgatgttaatgaatctagaca--tatatatgtcta 72
Query: 61 gattcattagcatcaatataaatgt 85
|||||||| ||||||||| |||||
Sbjct: 71 cattcattaacatcaatatgaatgt 47
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 6e-15
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||||||||| ||| |||||||| ||||||| ||| |||||||||||||||||| ||||
Sbjct: 46 catattcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatc 105
Query: 75 aatataaatgtg 86
|||| ||||||
Sbjct: 106 tatatgaatgtg 117
Score = 52.0 bits (26), Expect = 1e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||| | || ||||| ||||| ||||||| |||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctat 55
Query: 78 at 79
||
Sbjct: 54 at 53
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 79.8 bits (40), Expect = 6e-15
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||| ||| || ||||||||| ||| ||||| |||||||
Sbjct: 131 attctagcatttcccacattcatatagatgttgatgaatctaaatatatatagatgtcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| |||| |||| ||||||||||||
Sbjct: 71 gattcattaacatctatatgaatgtgagaaat 40
Score = 58.0 bits (29), Expect = 2e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 8 catttttcatattcatattgatattaatgaatctagatagatatatatgtctagattcat 67
||||| ||| |||||||| ||| |||||||||||||| | ||||||| | |||||||||
Sbjct: 39 catttctcacattcatatagatgttaatgaatctagacatctatatatatttagattcat 98
Query: 68 tagcatcaatataaatgtgagaaat 92
| |||| |||| |||||| |||||
Sbjct: 99 caacatctatatgaatgtgggaaat 123
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 6e-15
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||||||||| ||| |||||||| ||||||| ||| |||||||||||||||||| ||||
Sbjct: 117 catattcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatc 58
Query: 75 aatataaatgtg 86
|||| ||||||
Sbjct: 57 tatatgaatgtg 46
Score = 52.0 bits (26), Expect = 1e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||| | || ||||| ||||| ||||||| |||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctat 108
Query: 78 at 79
||
Sbjct: 109 at 110
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 77.8 bits (39), Expect = 2e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 50 atatatgtctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaat 90
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 62 attcattagcatcaatataaatgtgagaaat 92
|||||||||||||||||| ||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaat 19
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctaga 44
|||||| ||||| ||| |||||||||||| |||||||||||||
Sbjct: 98 attctagcatttctcacattcatattgatgctaatgaatctaga 55
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 2e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatat 51
|||||| ||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 103 attctatcatttttcacattcatattgatgttaatgaatctagatagatat 53
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||| ||||||||| ||||||| ||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaat 95
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 75.8 bits (38), Expect = 9e-14
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 51 tatatgtctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaat 40
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 9e-14
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||| | ||| ||||||||||| || |||||||||| | | |||||||||||
Sbjct: 32 attctagcatntctcacattcatattgaaatcgntgaatctagacatacatatatgtcta 91
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
|||||||| ||||||||| ||||||||||||
Sbjct: 92 gattcattgacatcaatatgaatgtgagaaat 123
Score = 67.9 bits (34), Expect = 2e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| ||| |||||||||||| | |||||||||||| | |||| ||||||||
Sbjct: 131 attctagcatttctcacattcatattgatgtcaatgaatctagacatatatgtatgtcta 72
Query: 61 gattca 66
||||||
Sbjct: 71 gattca 66
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 9e-14
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||||||||| || |||||||| | | |||||||||||||||| ||||| |||||||
Sbjct: 32 attctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtcta 91
Query: 61 gattcattagcatcaatataaatgtg 86
||||||||| || | |||| ||||||
Sbjct: 92 gattcattaacacctatatgaatgtg 117
Score = 71.9 bits (36), Expect = 1e-12
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| || |||||||| | | |||||||||||||| | ||||||| ||||
Sbjct: 131 attctagcattttccacattcatataggtgttaatgaatctagacatctatatatatcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaattttagaat 100
||||||||| || | |||| |||||| ||||| |||||||
Sbjct: 71 gattcattaacacctatatgaatgtgggaaatgttagaat 32
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 75.8 bits (38), Expect = 9e-14
Identities = 62/69 (89%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 24 attgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataaat 83
|||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| |||
Sbjct: 48 attgatgttaatgaatctagatagatat--atgtctagattcattaacatcaatatgaat 105
Query: 84 gtgagaaat 92
|| |||||
Sbjct: 106 atgggaaat 114
Score = 63.9 bits (32), Expect = 4e-10
Identities = 56/63 (88%), Gaps = 2/63 (3%)
Strand = Plus / Minus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||||||||||||| ||||||||||||| | |||||| | ||||||||||||| ||||
Sbjct: 108 catattcatattgatgttaatgaatctag--acatatatctatctagattcattaacatc 51
Query: 75 aat 77
|||
Sbjct: 50 aat 48
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 75.8 bits (38), Expect = 9e-14
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||||||||| || |||||||| | | |||||||||||||||| ||||| |||||||
Sbjct: 101 attctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtcta 42
Query: 61 gattcattagcatcaatataaatgtg 86
||||||||| || | |||| ||||||
Sbjct: 41 gattcattaacacctatatgaatgtg 16
Score = 71.9 bits (36), Expect = 1e-12
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| || |||||||| | | |||||||||||||| | ||||||| ||||
Sbjct: 2 attctagcattttccacattcatataggtgttaatgaatctagacatctatatatatcta 61
Query: 61 gattcattagcatcaatataaatgtgagaaattttagaat 100
||||||||| || | |||| |||||| ||||| |||||||
Sbjct: 62 gattcattaacacctatatgaatgtgggaaatgttagaat 101
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 4e-13
Identities = 79/92 (85%), Gaps = 2/92 (2%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||||||| ||||||| | || ||||||||||||||| |||||||||||||
Sbjct: 129 attctagcatttttcacattcatactcatgttaatgaatctagat--atatatatgtcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
|||||||| ||| | ||| |||||| |||||
Sbjct: 71 aattcattaacatgagtatgaatgtgggaaat 40
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 16 atattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatca 75
|||||||||| ||| |||||||||||||||| | | |||| ||||||||||||| ||||
Sbjct: 116 atattcatatagatgttaatgaatctagatatagacatatatctagattcattaacatcc 57
Query: 76 atataaatgtgag 88
|||| ||||||||
Sbjct: 56 atatgaatgtgag 44
Score = 60.0 bits (30), Expect = 6e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||||| || | ||| ||||||||||||| |||| ||
Sbjct: 49 attcatatggatgttaatgaatctagatatatgtctatatctagattcattaacatctat 108
Query: 78 at 79
||
Sbjct: 109 at 110
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 73.8 bits (37), Expect = 4e-13
Identities = 79/92 (85%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| ||||||||||||||||| ||||||| |
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctagatag--gcatatgtcca 89
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| |||||||||||| ||| |||||
Sbjct: 90 gattcattaacatcaatataaacgtgggaaat 121
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||| ||||||||| |||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaat 40
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||| | ||||||||||||||||||||| |||| ||
Sbjct: 25 attcatatagatgttaatgaatctagacacatatatatgtctagattcatttacatctat 84
Query: 78 ataaatgtg 86
|| ||||||
Sbjct: 85 atgaatgtg 93
Score = 65.9 bits (33), Expect = 9e-11
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| | |||||||||||| | |||||| ||||||||||||||| |||| ||
Sbjct: 90 attcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatctat 31
Query: 78 ataaatgtg 86
|| ||||||
Sbjct: 30 atgaatgtg 22
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 71.9 bits (36), Expect = 1e-12
Identities = 79/92 (85%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| ||||||||||||| | ||| |||||| ||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctagc-acatacatatgttta 90
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| |||||| |||||
Sbjct: 91 gattcattaacatcaatatgaatgtgggaaat 122
Score = 63.9 bits (32), Expect = 4e-10
Identities = 78/92 (84%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| |||||||||||| | | || ||| || |||
Sbjct: 130 attctagcatttcccacattcatattgatgttaatgaatctaaacatatgtatgtg-cta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| |||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaat 40
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 71.9 bits (36), Expect = 1e-12
Identities = 65/74 (87%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 19 ttcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaata 78
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 16 ttcatattgatattaatgaatctagatagatata---atctagattcattaatatcaata 72
Query: 79 taaatgtgagaaat 92
| || ||| |||||
Sbjct: 73 tgaacgtgggaaat 86
Score = 63.9 bits (32), Expect = 4e-10
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand = Plus / Minus
Query: 19 ttcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaata 78
||||||||||||||||||||||||||| ||||| | ||||||||||||| |||||||
Sbjct: 76 ttcatattgatattaatgaatctagat---tatatctatctagattcattaatatcaata 20
Query: 79 taaatgtgagaaat 92
| || ||| |||||
Sbjct: 19 tgaacgtgggaaat 6
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 69.9 bits (35), Expect = 6e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatag 47
||||||||||||| ||||||||||||||| ||||||||| |||||||
Sbjct: 32 attctaacattttccatattcatattgatgttaatgaatgtagatag 78
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 69.9 bits (35), Expect = 6e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 20 tcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatat 79
|||||| ||| |||||||| ||| | | ||||||||||||||||||||||||||| ||||
Sbjct: 51 tcatatagatgttaatgaacctatacacatatatatgtctagattcattagcatctatat 110
Query: 80 aaatgtg 86
||||||
Sbjct: 111 gaatgtg 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| ||||||||||||| | |||||| ||| ||| ||||||| |||| ||
Sbjct: 114 attcatatagatgctaatgaatctagacatatatatgtgtataggttcattaacatctat 55
Query: 78 at 79
||
Sbjct: 54 at 53
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
||||| || ||| |||||||||||||||| |||| | ||||||||||||||| |||| ||
Sbjct: 114 attcacatagatgttaatgaatctagatatatatgtgtgtctagattcattaacatctat 55
Query: 78 ataaatgtgag 88
|| ||||||||
Sbjct: 54 atgaatgtgag 44
Score = 58.0 bits (29), Expect = 2e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
|||||||| ||| |||||||||||||| | | |||||| ||||||||||||| ||||
Sbjct: 49 attcatatagatgttaatgaatctagacacacatatatatctagattcattaacatc 105
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||| | |||| | ||||||||||||||| |||| ||
Sbjct: 114 attcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatctat 55
Query: 78 ataaatgtgag 88
|| ||||||||
Sbjct: 54 atgaatgtgag 44
Score = 65.9 bits (33), Expect = 9e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||| | | |||||| ||||||||||||| |||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacacacatatatttctagattcattaacatctat 108
Query: 78 ataaatgtg 86
|| ||||||
Sbjct: 109 atgaatgtg 117
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||| | |||| | ||||||||||||||| |||| ||
Sbjct: 49 attcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatctat 108
Query: 78 ataaatgtgag 88
|| ||||||||
Sbjct: 109 atgaatgtgag 119
Score = 65.9 bits (33), Expect = 9e-11
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||| | | |||||| ||||||||||||| |||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacacacatatatttctagattcattaacatctat 55
Query: 78 ataaatgtg 86
|| ||||||
Sbjct: 54 atgaatgtg 46
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 69.9 bits (35), Expect = 6e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatat 51
|||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 109 attctaacatttcccacattcatattgatgttaatgaatctagatagatat 59
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 57 tctagattcattagcatcaatataaatgtgagaaattttagaat 100
||||||||||||| ||||||||| |||||| ||||| |||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaat 109
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 67.9 bits (34), Expect = 2e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 28 atattaatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtga 87
||||||||| |||||||||||||| |||||||||| ||||| ||||||||| ||||||
Sbjct: 32 atattaatggatctagatagatat--atgtctagatccattaacatcaatatgaatgtgg 89
Query: 88 gaaat 92
|||||
Sbjct: 90 gaaat 94
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 67.9 bits (34), Expect = 2e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 48 atatatatgtctagattcattagcatcaatataaatgtgagaaattttag 97
|||||||||||||| ||||||||||||||||| |||||| ||||| ||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatgttag 1
Score = 67.9 bits (34), Expect = 2e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 48 atatatatgtctagattcattagcatcaatataaatgtgagaaattttag 97
||||||||||||||||| |||||||||||||| |||||| ||||| ||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaatgttag 116
Score = 46.1 bits (23), Expect = 8e-05
Identities = 59/70 (84%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 4 ctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtctagat 63
||||||||| || |||||||||||| |||| |||||||| | ||||||||||||| |
Sbjct: 116 ctaacatttcccacattcatattgatgctaataaatctagaca--tatatatgtctagtt 59
Query: 64 tcattagcat 73
| ||||||||
Sbjct: 58 ttattagcat 49
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
||||||||||||| |||||||||| ||| ||||||||||| | |||||||||| ||
Sbjct: 32 attctaacattttctatattcatatagatgctaatgaatctatacgcatatatatgttta 91
Query: 61 gattcattagcatcaatataaatgtg 86
||||||||||||| |||| ||||||
Sbjct: 92 aattcattagcatctatatgaatgtg 117
Score = 46.1 bits (23), Expect = 8e-05
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| || |||||||| ||| |||||||| || | | |||||| || ||
Sbjct: 131 attctagcattttccacattcatatagatgctaatgaatttaaacatatatatgcgtata 72
Query: 61 gattcattagcatcaatat 79
|||||||||||||| ||||
Sbjct: 71 gattcattagcatctatat 53
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 2e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatcta 42
|||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 99 attctagcatttctcatattcatattgatattaatgaatcta 58
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 67.9 bits (34), Expect = 2e-11
Identities = 72/85 (84%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| ||||||||||||||| ||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgctaatgaatctagata------tatgtcta 85
Query: 61 gattcattagcatcaatataaatgt 85
||||||||||||||||||| |||||
Sbjct: 86 gattcattagcatcaatatgaatgt 110
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 52 atatgtctagattcattagcatcaatataaatgtgagaaat 92
|||| ||||||||||||||||||||||| |||||| |||||
Sbjct: 80 atatatctagattcattagcatcaatatgaatgtgggaaat 40
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||||| || | ||||||||||||||||| |||| ||
Sbjct: 114 attcatatggatgttaatgaatctagatatatgtctatgtctagattcattaacatctat 55
Query: 78 at 79
||
Sbjct: 54 at 53
Score = 65.9 bits (33), Expect = 9e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 16 atattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatca 75
|||||||||| ||| |||||||||||||| | | | |||| ||||||||||||| ||||
Sbjct: 47 atattcatatagatgttaatgaatctagacatagacatatatctagattcattaacatcc 106
Query: 76 atataaatgtgag 88
|||| ||||||||
Sbjct: 107 atatgaatgtgag 119
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 67.9 bits (34), Expect = 2e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagata 46
|||||| ||||| ||| |||||||||||||||||||||||||||||
Sbjct: 32 attctagcatttctcacattcatattgatattaatgaatctagata 77
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||| |||||||| ||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaat 40
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 65.9 bits (33), Expect = 9e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 3 tctaacatttttcatattcatattgatattaatgaatctagatagatat 51
|||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 35 tctaacatttcccacattcatattgatgttaatgaatctagatagatat 83
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtgagaaattttaga 98
||||||||||||| ||||||||| |||||| ||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttaga 35
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 9e-11
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 16 atattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatca 75
|||||||||| || ||| |||||||| ||||||||||||||||||||||| || | ||
Sbjct: 47 atattcatatagaggttagtgaatctatatagatatatatgtctagattcactaacctcc 106
Query: 76 atataaatgtgagaaat 92
|||| |||||| |||||
Sbjct: 107 atatgaatgtgggaaat 123
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 65.9 bits (33), Expect = 9e-11
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 3 tctaacatttttcatattcatattgatattaatgaatctagatagatat 51
||||||||||| || |||||||||||| |||||||||||||||| ||||
Sbjct: 101 tctaacattttccacattcatattgatgttaatgaatctagatatatat 53
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 50 atatatgtctagattcattagcatcaatataaatgtg 86
|||||| ||||||||||||| ||||||||| ||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtg 89
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 50 atatatgtctagattcattagcatcaatataaatgtg 86
|||||| ||||||||||||||||||||||||||||||
Sbjct: 75 atatatctctagattcattagcatcaatataaatgtg 111
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 52 atatgtctagattcattagcatcaatataaatgtgagaaat 92
|||| |||| |||||||||||||||| ||||||||||||||
Sbjct: 80 atatatctaaattcattagcatcaatgtaaatgtgagaaat 40
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 65.9 bits (33), Expect = 9e-11
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
|||||||| ||| |||||||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 114 attcatatagatgttaatgaatctatatacttatatgtgtctagattcattagcatc 58
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 9e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 9 atttttcatattcatattgatattaatgaatctagatagatatatatgt 57
|||| ||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 40 atttctcatatttatattgatgataatgaatctagatagatatatatgt 88
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 48 atatatatgtctagattcattagcatcaatataaatgtgagaaat 92
|||||| | ||||||||||||| ||||||||||||| ||||||||
Sbjct: 84 atatatctatctagattcattatcatcaatataaatatgagaaat 40
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 65.9 bits (33), Expect = 9e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 48 atatatatgtctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||||||||||| ||| |||||||||||| |||||
Sbjct: 84 atatatatgtctagattcattaacattaatataaatgtgggaaat 40
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 65.9 bits (33), Expect = 9e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| || |||||||||||||||| |||||| || |||||||||||| |||| ||
Sbjct: 25 attcatatatatgttaatgaatctagatatatatatgtgcctagattcattaacatctat 84
Query: 78 ataaatgtg 86
|| ||||||
Sbjct: 85 atgaatgtg 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| ||||||||||||| | |||||||| ||||||||||||| ||| ||
Sbjct: 90 attcatatagatgttaatgaatctaggcacatatatatatctagattcattaacatatat 31
Query: 78 ataaatgtg 86
|| ||||||
Sbjct: 30 atgaatgtg 22
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctaga 44
|||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 118 attctagcattttccatattcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||| ||||| ||| |||||||||||||||| | | |||||| ||||||||||| ||||
Sbjct: 46 catatgcatatagatgttaatgaatctagatatagacatatgtttagattcattaccatc 105
Query: 75 aatataaatgtg 86
|||| ||||||
Sbjct: 106 tatatgaatgtg 117
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 49 tatatatgtctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||||| ||||||||| |||||| |||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaat 40
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctaga 44
|||||| ||||| || |||||||||||| ||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||||||||| ||| ||||||||| |||| | |||||||||||||||||||| ||||
Sbjct: 46 catattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatc 105
Query: 75 aatataaatgtg 86
|||| ||||||
Sbjct: 106 tatatgaatgtg 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||| | |||| |||||| |||||||| |||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaacatctat 55
Query: 78 at 79
||
Sbjct: 54 at 53
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||| | | | |||||||||||||||||||| |||| ||
Sbjct: 114 attcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacatctat 55
Query: 78 ataaatgt 85
|| |||||
Sbjct: 54 atgaatgt 47
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||| | |||| | ||| ||||||||||| |||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatatatgtgtgtttagattcattaacatctat 108
Query: 78 ataaatgtg 86
|| ||||||
Sbjct: 109 atgaatgtg 117
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctaga 44
||||||||||||| || |||||||||||| ||||||||||||||
Sbjct: 112 attctaacattttccacattcatattgatgttaatgaatctaga 69
Score = 60.0 bits (30), Expect = 6e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 51 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaat 100
||||||||||||||||||| ||||||||| |||||| |||| |||||||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaat 112
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 8 catttttcatattcatattgatattaatgaatctagata 46
||||||||||||| ||||||||| |||||||||||||||
Sbjct: 72 catttttcatatttatattgatactaatgaatctagata 34
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||| |||||||||||| ||| ||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaat 71
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 48 atatatatgtctagattcattagcatcaatataaatgtg 86
||||||||||||||||||||||||||| |||| ||||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtg 97
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 61.9 bits (31), Expect = 1e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| |||||| || |||||||| ||| ||||||| | |||||||||| |||||||||
Sbjct: 32 attctagcattttccacattcatatcgatgttaatgagtttagatagatacatatgtcta 91
Query: 61 gat 63
|||
Sbjct: 92 gat 94
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 1e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 32 taatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtg 86
|||||||||||| | | ||||||||||||||||||||| ||| |||||||||||
Sbjct: 100 taatgaatctaggcacacatatatgtctagattcattagtatctatataaatgtg 46
Score = 50.1 bits (25), Expect = 5e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 22 atattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataa 81
|||| |||| ||||||||||||| | |||| | || |||||||||||||||| |||| |
Sbjct: 53 atatagatactaatgaatctagacatatatgtgtgcctagattcattagcatatatatga 112
Query: 82 atgtg 86
|||||
Sbjct: 113 atgtg 117
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 61.9 bits (31), Expect = 1e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| | |||| || |||||||||||| ||||||| | |||||||||| |||||||||
Sbjct: 125 attctagccttttccacattcatattgatgttaatgagtttagatagatacatatgtcta 66
Query: 61 gat 63
|||
Sbjct: 65 gat 63
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 61.9 bits (31), Expect = 1e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 50 atatatgtctagattcattagcatcaatataaatgtgagaaat 92
|||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaat 40
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 9 atttttcatattcatattgatattaatgaatctaga 44
|||| ||| |||||||||||| ||||||||||||||
Sbjct: 40 atttctcacattcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 54 atgtctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||||||||||||||||||| || |||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaat 40
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 61.9 bits (31), Expect = 1e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 2 ttctaacatttttcatattcatattgatattaatgaatctagatagatatatatg 56
||||| |||||| |||||||||||| || ||||||||||||||| |||||||||
Sbjct: 106 ttctagcattttccatattcatattaatgttaatgaatctagatgaatatatatg 52
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 61.9 bits (31), Expect = 1e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatag 47
|||||| ||||| ||| |||||||||||| |||||||||||||||||
Sbjct: 100 attctagcatttctcacattcatattgatgttaatgaatctagatag 54
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||| ||||||||| ||||||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaat 92
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatcta 42
|||||| |||||| |||||| |||||||||||||||||||||
Sbjct: 119 attctagcattttccatatttatattgatattaatgaatcta 78
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagat 45
|||||| ||||| ||| |||||||||||| |||||||||||||||
Sbjct: 32 attctagcatttctcacattcatattgatgttaatgaatctagat 76
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||| ||||||||| ||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaat 40
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa
Indica Group
Length = 134
Score = 60.0 bits (30), Expect = 6e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 8 catttttcatattcatattgatattaatgaatctagatagatatatatgt 57
||||||||| | ||||||||| |||||||||||||||||||||| ||||
Sbjct: 96 catttttcacgtacatattgatgttaatgaatctagatagatataaatgt 47
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 60.0 bits (30), Expect = 6e-09
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 8 catttttcatattcatattgatattaatgaatctagatagatatatatgtctagattcat 67
||||||||| |||||||| ||| ||||||||||| || |||||||||||| |||||||
Sbjct: 122 catttttcacattcatatagatgttaatgaatct--atgcatatatatgtcttgattcat 65
Query: 68 tagcatcaatataaatgtgagaaat 92
|| |||| | || |||||| |||||
Sbjct: 64 taacatctacatgaatgtgggaaat 40
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 51 tatatgtctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||| ||||||||| |||||| |||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaat 40
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctaga 44
|||||| ||||| || |||||||||||| ||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagata 46
|||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 88 attctagcatttcccacattcatattgatattaatgaatctagata 43
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 21 catattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||| ||| |||||||||||| ||| ||| |||||||||||||||||| ||||
Sbjct: 111 catatggatgttaatgaatctaaatacatacatatgtctagattcattaacatc 58
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagata 46
|||||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 108 attctaacatttcccacattcatattgatgttaatgaatctagata 63
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 57 tctagattcattagcatcaatataaatgtgagaaattttagaat 100
||||||||||||| ||||||||| |||||| ||||| |||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaat 108
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 27 gatattaatgaatctagatagatatatatgtctagattcattagcatcaatata 80
|||||||||||||||||||| || ||| | ||||||||||||| |||| |||||
Sbjct: 103 gatattaatgaatctagatatatgtatgtttctagattcattaacatctatata 50
Score = 50.1 bits (25), Expect = 5e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 22 atattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataa 81
|||| ||| |||||||||||||| | ||| |||| ||||||||||||| ||| | ||||
Sbjct: 51 atatagatgttaatgaatctagaaacatacatatatctagattcattaatatctaaataa 110
Query: 82 atgtg 86
|||||
Sbjct: 111 atgtg 115
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 55 tgtctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||| ||||||||| ||||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaat 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 9 atttttcatattcatattgatattaatgaatctaga 44
|||| ||| |||||||||||| ||||||||||||||
Sbjct: 112 atttctcacattcatattgatgttaatgaatctaga 77
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagata 46
|||||| |||||| |||||||||||||| ||||||||||||||||
Sbjct: 32 attctagcattttctatattcatattgatgttaatgaatctagata 77
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagat 45
|||||| ||||||||| |||||||||||| ||||||||||||||
Sbjct: 32 attctagcatttttcacattcatattgatgctaatgaatctagat 76
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||||||| ||||||| ||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaat 40
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 57 tctagattcattagcatcaatataaatgt 85
|||| ||||||||||||||||||||||||
Sbjct: 76 tctaaattcattagcatcaatataaatgt 104
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 60 agattcattagcatcaatataaatgtgagaaat 92
|||||||||||||||||||| ||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaat 100
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 64 tcattagcatcaatataaatgtgagaaat 92
|||||||||||||||| ||||||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaat 40
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagat 49
|||||| ||||| ||||||| |||||||| ||||| |||||||||||||
Sbjct: 118 attctagcatttctcatatttatattgatgttaataaatctagatagat 70
Score = 52.0 bits (26), Expect = 1e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 43 gatagatatatatgtctagattcattagcatcaatataaatgtgagaaat 92
|||||||| || | |||||||| |||| ||||||||||||| ||||||||
Sbjct: 61 gatagatagatctatctagatttattaacatcaatataaatatgagaaat 110
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||||||||| ||| ||||||||| |||| | |||||||||||||||||||| ||||
Sbjct: 46 catattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatc 105
Query: 75 aatat 79
||||
Sbjct: 106 tatat 110
Score = 50.1 bits (25), Expect = 5e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||||||||| ||| |||||||||||||| | |||| |||||| |||||||| ||||
Sbjct: 117 catattcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaacatc 58
Query: 75 aatat 79
||||
Sbjct: 57 tatat 53
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagat 45
|||||| ||||| ||| |||||||||||| |||||||||||||||
Sbjct: 32 attctagcatttctcacattcatattgatgttaatgaatctagat 76
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||| ||||||||| ||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaat 40
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 8 catttttcatattcatattgatattaatgaatcta 42
|||||| |||||| |||||||||||||||||||||
Sbjct: 112 cattttccatatttatattgatattaatgaatcta 78
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 58.0 bits (29), Expect = 2e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatat 53
|||||| ||||| || |||||||||||| |||||| ||||||||||||||||
Sbjct: 118 attctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 52 atatgtctagattcattagcatcaatataaatgtgagaaattttagaat 100
|||||| ||||||||||| ||||||||| |||||| ||||| |||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaat 32
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatcta 42
|||||||||||| || |||||||||||| ||||||||||||
Sbjct: 32 attctaacatttcccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagat 45
|||||| ||||| ||||||||||||||| |||||||||||||||
Sbjct: 32 attctagcatttcccatattcatattgatgttaatgaatctagat 76
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagat 45
|||||| ||||| ||||||||||||||| |||||||||||||||
Sbjct: 113 attctagcatttcccatattcatattgatgttaatgaatctagat 69
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
|||||| | ||| |||||||||||| | | |||||||||||||||||||||| ||||
Sbjct: 49 attcatttagatgttaatgaatctaaacacatatatatgtctagattcattaacatc 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 31 ttaatgaatctagatagatatatatgtctagattcattagcatc 74
|||||||||||||| | |||||| ||| ||||||||||| ||||
Sbjct: 101 ttaatgaatctagacatatatatgtgtttagattcattaacatc 58
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 31 ttaatgaatctagatagatatatatgtctagattcattagcatc 74
|||||||||||| | | ||| |||||||||||||||||||||||
Sbjct: 62 ttaatgaatctaaacacatacatatgtctagattcattagcatc 105
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctaga 44
|||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct: 112 attctagcatttcccatattcatattgatgttaatgaatctaga 69
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 55 tgtctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||| ||||||||| ||| || |||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaat 104
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 56.0 bits (28), Expect = 9e-08
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 32 taatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaa 91
|||||||||||| | | ||||||||||||||||||| ||||| |||| |||||| | ||
Sbjct: 42 taatgaatctaggcacacatatatgtctagattcatttgcatctatatgaatgtgggcaa 101
Query: 92 ttttagaa 99
| ||||||
Sbjct: 102 tgttagaa 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 33 aatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtg 86
|||||||||||| | |||| | || |||||||||||||||| |||| ||||||
Sbjct: 78 aatgaatctagacatatatgtgtgcctagattcattagcatagatatgaatgtg 25
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 56.0 bits (28), Expect = 9e-08
Identities = 75/92 (81%), Gaps = 9/92 (9%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| |||||||||||||| |||||||
Sbjct: 122 attctagcatttcccacattcatattgatgttaatgaatctaga---------atgtcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| |||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaat 40
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctaga 44
|||||| ||||| || |||||||||||| ||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctaga 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||| ||||||||| |||||| |||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaat 114
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 9e-08
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 2 ttctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtctag 61
||||| |||| | ||||| ||||| ||| |||||||||||| ||| ||| | ||||||||
Sbjct: 130 ttctagcattgtccatatacatatagatgttaatgaatctaaatatatacacatgtctag 71
Query: 62 attcatta 69
||||||||
Sbjct: 70 attcatta 63
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 48 atatatatgtctagattcattagcatcaatat 79
|||||||||||||||||||||| |||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatat 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 8 catttttcatattcatattgatattaatgaatctagatagatatat 53
|||||| | ||||||||||||| ||||||||||||| | ||||||
Sbjct: 98 cattttccgtattcatattgatgataatgaatctagacatatatat 53
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctaga 44
|||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct: 32 attctagcatttcccatattcatattgatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 55 tgtctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||| ||||||||| ||| || |||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaat 40
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||||||||||| ||| ||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaat 40
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 9 atttttcatattcatattgatattaatgaatctagat 45
|||||||||||| |||||||| ||||||||||||||
Sbjct: 40 atttttcatatttatattgatgctaatgaatctagat 76
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa
Japonica Group
Length = 114
Score = 56.0 bits (28), Expect = 9e-08
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||||||||| || ||||||||||||| | | ||||||| |||||||||||| ||||
Sbjct: 22 catattcatatatatgttaatgaatctaggcatacatatatgcctagattcattaacatc 81
Query: 75 aatataaatgtg 86
|||| ||||||
Sbjct: 82 tatatgaatgtg 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcatta 69
|||||||| ||| ||||||||||||| | |||| |||| ||||||||||||
Sbjct: 90 attcatatagatgttaatgaatctaggcatatatgtatgcctagattcatta 39
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctaga 44
|||||| |||||| || |||||||||||| ||||||||||||||
Sbjct: 32 attctagcattttccacattcatattgatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtg 86
||||||||||||| ||||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtg 46
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 48 atatatatgtctagattcattagcatcaatataaatgtg 86
|||||||||||||||||||||| |||| |||| ||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtg 91
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 58 ctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||||||||||| |||||| |||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaat 40
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaat 39
|||||| |||||| ||||||||||||||| |||||||||
Sbjct: 32 attctagcattttccatattcatattgatgttaatgaat 70
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 58 ctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||||||||||| |||||| |||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaat 108
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 54.0 bits (27), Expect = 3e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatat 51
|||||| ||||||||| | |||||||| |||||||||||||||||||||
Sbjct: 103 attctagcatttttcacgtatatattgatgttaatgaatctagatagatat 53
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 51 tatatgtctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||||||| ||| ||||| ||||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaat 103
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatcta 42
|||||| |||||| || |||||||||||| ||||||||||||
Sbjct: 113 attctagcattttccacattcatattgatgttaatgaatcta 72
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 atatgtctagattcattagcatcaatataaatgtg 86
|||||| ||||||||||| ||||||||| ||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtg 99
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatcta 42
|||||| |||||| || |||||||||||| ||||||||||||
Sbjct: 32 attctagcattttccacattcatattgatgttaatgaatcta 73
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaa 38
|||||| ||||| ||| |||||||||||| ||||||||
Sbjct: 122 attctagcatttctcacattcatattgatgttaatgaa 85
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ttcattagcatcaatataaatgtgagaaat 92
||||||| ||||||||| ||||||||||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaat 114
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatcta 42
|||||| |||||| || |||||||||||| ||||||||||||
Sbjct: 32 attctagcattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 1e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 19 ttcatattgatattaatgaatctagatagatatatatgtctagattcatt 68
||||||| ||| | |||||||||| | | |||||||||||||||||||||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcatt 64
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 16 atattcatattgatattaatgaatctagat 45
|||||||||||||| |||||||||||||||
Sbjct: 104 atattcatattgatgttaatgaatctagat 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||| ||||||||| |||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaat 40
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagat 45
|||||||||||| |||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctagat 76
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagata 46
|||||| |||||| || |||||||||||| |||||| |||||||||
Sbjct: 32 attctagcattttccacattcatattgatgttaatgtatctagata 77
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 54 atgtctagattcattagcatcaatataaatgtgagaaattttagaa 99
||||||||||||||||||||| |||| |||||| | ||| ||||||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaa 130
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| ||||||| |||| ||| ||| |||||||| || ||||||||||||
Sbjct: 32 attctagcatttctcatattgatatagatgttagtgaatctaagtatgtatatatgtcta 91
Query: 61 gattca 66
||||||
Sbjct: 92 gattca 97
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 45 tagatatatatgtctagattcattagcatcaatataaatgtg 86
||||||||||||||||||||||||| ||| |||| ||||||
Sbjct: 53 tagatatatatgtctagattcattaacatatatatgaatgtg 12
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 16 atattcatattgatattaatgaatctagat 45
|||||||||||||| |||||||||||||||
Sbjct: 47 atattcatattgatgttaatgaatctagat 76
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagat 45
|||||||||||| |||||||||||||||
Sbjct: 102 attcatattgatgttaatgaatctagat 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||| ||||||||| |||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaat 111
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatcta 42
|||||| ||||| |||||| |||||||||||||||||||||
Sbjct: 32 attctagcatttctcatatagatattgatattaatgaatcta 73
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagata 46
|||||||||||| ||||||||||||||||
Sbjct: 79 attcatattgatgttaatgaatctagata 51
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 5e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
||||||||||| ||| |||||||||||||| | | || ||| |||| |||||||| ||||
Sbjct: 117 catattcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatc 58
Query: 75 aatat 79
||||
Sbjct: 57 tatat 53
Score = 46.1 bits (23), Expect = 8e-05
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 21 catattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatat 79
||||| ||| ||||||||| |||||| | || | ||||||||||||||| |||| ||||
Sbjct: 52 catatagatgttaatgaatttagatatagatgtgtgtctagattcattaacatctatat 110
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 56 gtctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||||||||||||| ||| || |||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaat 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 15 catattcatattgatattaatgaatctaga 44
||||||||||||||| |||||||||||||
Sbjct: 95 catattcatattgatgctaatgaatctaga 66
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 50.1 bits (25), Expect = 5e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| |||||||||||||| | | || ||| |||| |||||||| |||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatctat 108
Query: 78 ataaatgtg 86
||| |||||
Sbjct: 109 atatatgtg 117
Score = 48.1 bits (24), Expect = 2e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 22 atattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataa 81
|||| ||| ||||||||| |||||| | || | ||||||||||||||| |||| |||| |
Sbjct: 110 atatagatgttaatgaatttagatatagatgtgtgtctagattcattaacatctatatga 51
Query: 82 atgt 85
||||
Sbjct: 50 atgt 47
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 5e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 14 tcatattcatattgatattaatgaatctagatagatatatatgtctagattcattagcat 73
|||||| ||||| || |||||||||||| | | ||| |||||||||||||||||| |||
Sbjct: 45 tcatatacatatagacgttaatgaatctaaacacatacatatgtctagattcattaacat 104
Query: 74 c 74
|
Sbjct: 105 c 105
Score = 46.1 bits (23), Expect = 8e-05
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 15 catattcatattgatattaatgaatctagatagatatatatgtctagattcatta 69
||||||||| | ||| |||||||||||||| | || ||| ||| |||||||||||
Sbjct: 117 catattcatttagatgttaatgaatctagacatatgtatgtgtttagattcatta 63
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 50.1 bits (25), Expect = 5e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||||| |||||||||| | | |||| | ||||||||||||||| ||| ||
Sbjct: 114 attcatatagatatcaatgaatctaaacatatatgtgtgtctagattcattaacatatat 55
Query: 78 ataaatgtg 86
|| ||||||
Sbjct: 54 atgaatgtg 46
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcatt 68
|||||||| || |||||||||||||| | | |||||||| ||||||||||
Sbjct: 49 attcatatatatgttaatgaatctagacacacatatatgtttagattcatt 99
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 50.1 bits (25), Expect = 5e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||| ||| ||||||||||||| | | ||| |||||||||||||||| ||| ||
Sbjct: 90 attcatatagatgttaatgaatctaggcacacatacatgtctagattcattaacatatat 31
Query: 78 ataaatgtg 86
|| ||||||
Sbjct: 30 atgaatgtg 22
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 5e-06
Identities = 75/92 (81%), Gaps = 6/92 (6%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtcta 60
|||||| ||||| || |||||||||||| | |||||||||||| |||| |||||
Sbjct: 125 attctagcatttcccacattcatattgatgtcaatgaatctagacagat------gtcta 72
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
|||||||| ||||||||| |||||| |||||
Sbjct: 71 gattcattgacatcaatatgaatgtgggaaat 40
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 55 tgtctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||| ||||||||| |||||| |||||
Sbjct: 80 tgtctagattcattgacatcaatatgaatgtgggaaat 117
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 52 atatgtctagattcattagcatcaatataaatgtgagaaat 92
|||||| ||||||||||| ||||||||| |||||| |||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaat 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatcta 42
|||||| ||||| || |||||||||||| ||||||||||||
Sbjct: 113 attctagcatttcccacattcatattgatgttaatgaatcta 72
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 14 tcatattcatattgatattaatgaatctagat 45
|||||||||||| ||| |||||||||||||||
Sbjct: 45 tcatattcatatagatgttaatgaatctagat 76
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatc 40
|||||| ||||| ||| |||||||||||| ||||||||||
Sbjct: 114 attctagcatttctcacattcatattgatgttaatgaatc 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||| ||||||||| ||||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaat 106
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 8 catttttcatattcatattgatattaatgaatctagatagatat 51
||||||||||||| | ||| || |||||||||||||| ||||||
Sbjct: 39 catttttcatatttacattaatgttaatgaatctagacagatat 82
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 51 tatatgtctagattcattagcatcaatataaatgtg 86
||||||||||||||||||| |||| |||| ||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 48.1 bits (24), Expect = 2e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 16 atattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatca 75
|||||||| | ||| |||||||||||||| | ||| | ||||||||||||||| ||||
Sbjct: 114 atattcatctagatgttaatgaatctagaca--tatgtgtgtctagattcattaacatct 57
Query: 76 atataaatgtg 86
|||| ||||||
Sbjct: 56 atatgaatgtg 46
Score = 44.1 bits (22), Expect = 3e-04
Identities = 49/57 (85%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 74
|||||||| ||| ||||||||||||| | | | |||||||||||||||||| ||||
Sbjct: 49 attcatatagatgttaatgaatctag--acacacatatgtctagattcattaacatc 103
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 48.1 bits (24), Expect = 2e-05
Identities = 62/75 (82%), Gaps = 6/75 (8%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
|||||||||||| | |||||||||||| |||| ||||||||||||| |||||||
Sbjct: 74 attcatattgatgtcaatgaatctagacagat------gtctagattcattgacatcaat 21
Query: 78 ataaatgtgagaaat 92
|| |||||| |||||
Sbjct: 20 atgaatgtgggaaat 6
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 55 tgtctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||| ||||||||| |||||| |||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaat 83
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||| ||||| |||||| |||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaat 97
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 48.1 bits (24), Expect = 2e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatata 52
|||||| |||||| || | | |||||||| |||||||||||| |||||||||
Sbjct: 32 attctagcattttccacaattatattgatgttaatgaatctatatagatata 83
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||| |||||| |||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaat 40
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||| |||||| |||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaat 103
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 atattcatattgatattaatgaatctag 43
|||||||||||||| |||||||||||||
Sbjct: 47 atattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||| |||||| |||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaat 14
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 61 gattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||| |||||| |||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaat 77
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||| ||||| |||||| |||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaat 40
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 49 tatatatgtctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||||| || ||||| |||||| |||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaat 100
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctaga 44
|||||| ||||| || ||||||||| |||||||||||||||||
Sbjct: 108 attctagcatttcccacattcatatttatattaatgaatctaga 65
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa
Indica Group
Length = 141
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 53 tatgtctagattcattagcatcaatataaat 83
||||||||||||||||| |||| ||||||||
Sbjct: 63 tatgtctagattcattaacatctatataaat 93
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 8e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatag 47
|||||| |||||| || ||||||| |||| ||||||||||||||||
Sbjct: 32 attctagcattttccacattcatactgatgctaatgaatctagatag 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 57 tctagattcattagcatcaatataaatgtg 86
||||||||||||||||||| ||| ||||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtg 46
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 48 atatatatgtctagattcattagcatc 74
|||||||||||||||||||||| ||||
Sbjct: 84 atatatatgtctagattcattaacatc 58
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagatagatat 51
|||||| |||||| || ||| |||||||||||||| ||| |||||| ||||
Sbjct: 32 attctagcattttccacatttatattgatattaataaatttagataaatat 82
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 48 atatatatgtctagattcattagcatcaatataaatgtg 86
||||| |||||||||||||||| |||| |||| ||||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtg 91
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctag 43
|||||| ||||||||| ||||||||||| ||||||||||||
Sbjct: 104 attctatcatttttcacgttcatattgatgctaatgaatctag 62
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 58 ctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||||||||||| || |||| ||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaat 96
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 50 atatatgtctagattcattagcatcaatataaatgtgagaaat 92
||||||||||||||||||||| | ||||| |||||| |||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaat 95
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 48 atatatatgtctagattcattagcatcaatataaatgtg 86
|||||||||||||||||||||| ||| |||| ||||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtg 91
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 62 attcattagcatcaatataaatgtgagaaat 92
|||||||||||||||||| |||||| |||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaat 79
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 46.1 bits (23), Expect = 8e-05
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaatctagatagatatatatgtctagatt 64
|||||||| ||| |||||||||||||||| || || ||||||||||
Sbjct: 115 attcatatagatgttaatgaatctagatatatgtaggtgtctagatt 69
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 18 attcatattgatattaatgaat 39
||||||||||||||||||||||
Sbjct: 82 attcatattgatattaatgaat 61
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 3e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 51 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaat 100
||||| |||||||||| || || ||||||||||||||||| |||||||
Sbjct: 81 tatatatctagattcactaatttccatataaatgtgagaaatgttagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 1 attctaacatttttcatattcatattgatattaatgaatctagata 46
|||||||||||| ||| ||| |||| || |||| ||||||||||||
Sbjct: 32 attctaacatttctcacatttatatggaaattagtgaatctagata 77
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 55 tgtctagattcattagcatcaatataaatgtgagaaat 92
|||||||||||||| ||||||||| |||||| |||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaat 40
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 catcaatataaatgtgagaaat 92
||||||||||||||||||||||
Sbjct: 37 catcaatataaatgtgagaaat 58
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 15 catattcatattgatattaatgaatctaga 44
||||| ||||| ||||||||||||||||||
Sbjct: 46 catatgcatatagatattaatgaatctaga 75
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ttcattagcatcaatataaatgtgagaaat 92
||||||| |||||||||||||||| |||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaat 116
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 attctaacatttttcatattcatattgatattaatgaatcta 42
|||||| ||||| || |||||||||||| ||||||||||||
Sbjct: 103 attctagcatttcccacattcatattgatgttaatgaatcta 62
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 59 tagattcattagcatcaatataaatgtgagaaat 92
||||||||||| ||||||||| |||||| |||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaat 95
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa
Indica Group
Length = 140
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 15 catattcatattgatattaatgaatctaga 44
||||||||||||||| ||||| ||||||||
Sbjct: 95 catattcatattgatgttaataaatctaga 66
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 9 atttttcatattcatattgatattaatgaatcta 42
||||| || |||||||||||| ||||||||||||
Sbjct: 95 attttccacattcatattgatgttaatgaatcta 62
