miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 109 bits (55), Expect = 6e-24
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatatatattt-tagattca 59
||||| || |||||||||| ||||||||| ||||||||||||||||||| | ||||||||
Sbjct: 13 catttctcacattcatatt-gatgttaatgaatctagatagatatatatgtctagattca 71
Query: 60 ttaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||
Sbjct: 72 ttaacatcaatatgaatgtgggaaatg 98
Score = 75.8 bits (38), Expect = 8e-14
Identities = 70/78 (89%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||||||||| |||||||| | |||||| | | |||||||||||||||||
Sbjct: 89 cattcatatt-gatgttaatgaatctagacatatatatctatctagattcattaacatca 31
Query: 69 atatgaatgtgggaaatg 86
||||||||||| ||||||
Sbjct: 30 atatgaatgtgagaaatg 13
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 6e-21
Identities = 79/86 (91%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 2 atttttcgcattcatatttgatgttaataaatctagatagatatatattt-tagattcat 60
||||||| |||||||||| ||| ||||| ||||||||||||||||||| | |||||||||
Sbjct: 123 atttttcacattcatatt-gattttaatgaatctagatagatatatatgtctagattcat 65
Query: 61 taacatcaatatgaatgtgggaaatg 86
||| ||||||||||||||||||||||
Sbjct: 64 taatatcaatatgaatgtgggaaatg 39
Score = 54.0 bits (27), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||| ||||| |||||||| | |||||| | | |||||||||||| ||||
Sbjct: 48 cattcatatt-gatattaatgaatctagacatatatatctatctagattcattaaaatca 106
Query: 69 atatgaatgtg 79
|||||||||||
Sbjct: 107 atatgaatgtg 117
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 99.6 bits (50), Expect = 6e-21
Identities = 73/78 (93%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||||||||| |||||| |||||||||||| | |||||||||||||||||
Sbjct: 89 cattcatatt-gatgttaatgaatctaaatagatatatatgtctagattcattaacatca 31
Query: 69 atatgaatgtgggaaatg 86
||||||||||||||||||
Sbjct: 30 atatgaatgtgggaaatg 13
Score = 91.7 bits (46), Expect = 1e-18
Identities = 72/78 (92%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatat-tttagattcattaacatca 68
|||||||||| ||||||||| |||||||| | |||||| | |||||||||||||||||||
Sbjct: 22 cattcatatt-gatgttaatgaatctagacatatatatctatttagattcattaacatca 80
Query: 69 atatgaatgtgggaaatg 86
||||||||||||||||||
Sbjct: 81 atatgaatgtgggaaatg 98
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 97.6 bits (49), Expect = 2e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 77
|||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||
Sbjct: 107 ttgatgttaataaatctatatagatatatatgtctagattcattaacatcaatatgaata 48
Query: 78 tgggaaatg 86
|||||||||
Sbjct: 47 tgggaaatg 39
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 77
||||||||||| |||||||| | |||||| | | |||||| |||||||||||||| ||||
Sbjct: 56 ttgatgttaatgaatctagacatatatatctatatagatttattaacatcaatataaatg 115
Query: 78 tg 79
||
Sbjct: 116 tg 117
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 97.6 bits (49), Expect = 2e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 77
|||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||
Sbjct: 54 ttgatgttaataaatctatatagatatatatgtctagattcattaacatcaatatgaata 113
Query: 78 tgggaaatg 86
|||||||||
Sbjct: 114 tgggaaatg 122
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 77
||||||||||| |||||||| | |||||| | | |||||| |||||||||||||| ||||
Sbjct: 105 ttgatgttaatgaatctagacatatatatctatatagatttattaacatcaatataaatg 46
Query: 78 tg 79
||
Sbjct: 45 tg 44
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 97.6 bits (49), Expect = 2e-20
Identities = 72/77 (93%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||||||||| ||||||||||||||||||| | || ||||||||||||||
Sbjct: 48 cattcatatt-gatgttaatgaatctagatagatatatatgtctacattcattaacatca 106
Query: 69 atatgaatgtgggaaat 85
|||||||||||||||||
Sbjct: 107 atatgaatgtgggaaat 123
Score = 75.8 bits (38), Expect = 8e-14
Identities = 70/78 (89%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||||||||| ||| |||| | |||||| | | |||||||||||||||||
Sbjct: 115 cattcatatt-gatgttaatgaatgtagacatatatatctatctagattcattaacatca 57
Query: 69 atatgaatgtgggaaatg 86
||||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatg 39
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 9e-20
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 77
||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||||||
Sbjct: 56 ttgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatg 115
Query: 78 tgggaaat 85
||||||||
Sbjct: 116 tgggaaat 123
Score = 48.1 bits (24), Expect = 2e-05
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||| ||||| |||||||| | |||||| | | |||||||||||||||||
Sbjct: 115 cattcatatt-gatattaatgaatctagacatatatatctatctagattcattaacatca 57
Query: 69 atat 72
||||
Sbjct: 56 atat 53
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 95.6 bits (48), Expect = 9e-20
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 20 tgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgt 78
|||||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||||
Sbjct: 61 tgatgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgt 120
Query: 79 gggaaatg 86
||||||||
Sbjct: 121 gggaaatg 128
Score = 46.1 bits (23), Expect = 7e-05
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 20 tgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatg 73
|||||||||| |||||||| | |||||| | | ||||||||||||||||| ||||
Sbjct: 110 tgatgttaatgaatctagacatatatatctatctagattcattaacatcactatg 56
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 9e-20
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 77
||||||||||| ||||||||||||||||||| | |||||||||||||| |||||||||||
Sbjct: 56 ttgatgttaatgaatctagatagatatatatgtctagattcattaacaacaatatgaatg 115
Query: 78 tgggaaat 85
||||||||
Sbjct: 116 tgggaaat 123
Score = 60.0 bits (30), Expect = 5e-09
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| | ||||||| |||||||| | |||||| | | |||||||||||||||||
Sbjct: 115 cattcatatt-gttgttaatgaatctagacatatatatctatctagattcattaacatca 57
Query: 69 atatgaatgtgggaaatg 86
||||| |||||| |||||
Sbjct: 56 atatggatgtggaaaatg 39
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 1e-18
Identities = 72/78 (92%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||| ||||| ||||||||||||||||||| | |||||||||||||||||
Sbjct: 115 cattcatatt-gatattaatgaatctagatagatatatatgtctagattcattaacatca 57
Query: 69 atatgaatgtgggaaatg 86
|||| |||||||||||||
Sbjct: 56 atataaatgtgggaaatg 39
Score = 73.8 bits (37), Expect = 3e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 77
||||||||||| |||||||| | |||||| | | |||||||||||| |||||||||||||
Sbjct: 56 ttgatgttaatgaatctagacatatatatctatctagattcattaatatcaatatgaatg 115
Query: 78 tgggaaatg 86
|||||||||
Sbjct: 116 tgggaaatg 124
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 1e-18
Identities = 72/78 (92%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| | ||||||| ||||||||||||||||||| | ||||||||||| |||||
Sbjct: 48 cattcatatt-gttgttaatgaatctagatagatatatatgtctagattcattaccatca 106
Query: 69 atatgaatgtgggaaatg 86
||||||||||||||||||
Sbjct: 107 atatgaatgtgggaaatg 124
Score = 67.9 bits (34), Expect = 2e-11
Identities = 69/78 (88%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| |||| |||| |||||||| | |||||| | | |||||||||||||| ||
Sbjct: 115 cattcatatt-gatggtaatgaatctagacatatatatctatctagattcattaacaaca 57
Query: 69 atatgaatgtgggaaatg 86
||||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatg 39
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 1e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 22 atgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtgg 80
|||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 104 atgttaatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgg 45
Query: 81 gaaatg 86
| ||||
Sbjct: 44 gtaatg 39
Score = 75.8 bits (38), Expect = 8e-14
Identities = 70/78 (89%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||||||||| |||||||| | |||||| | | ||||||||||||||| |
Sbjct: 48 cattcatatt-gatgttaatgaatctagacatatatatctatctagattcattaacatta 106
Query: 69 atatgaatgtgggaaatg 86
||||||||||||||||||
Sbjct: 107 atatgaatgtgggaaatg 124
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 5e-18
Identities = 71/77 (92%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| || |||||| ||||||||||||||||||||| ||||||||||| |||||
Sbjct: 48 cattcatatt-gacgttaatgaatctagatagatatatatttctagattcattaccatca 106
Query: 69 atatgaatgtgggaaat 85
|||| ||||||||||||
Sbjct: 107 atattaatgtgggaaat 123
Score = 65.9 bits (33), Expect = 8e-11
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 77
|||||| |||| |||||||| | |||||| | | ||||||||||||| ||||||||||||
Sbjct: 107 ttgatggtaatgaatctagaaatatatatctatctagattcattaacgtcaatatgaatg 48
Query: 78 tgggaaatg 86
|||||||||
Sbjct: 47 tgggaaatg 39
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 89.7 bits (45), Expect = 5e-18
Identities = 71/77 (92%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||| ||||| ||||||||||||||||||| | |||||||||||||||||
Sbjct: 47 cattcatatt-gatattaatgaatctagatagatatatatgtctagattcattaacatca 105
Query: 69 atatgaatgtgggaaat 85
|||||||||||| ||||
Sbjct: 106 atatgaatgtggaaaat 122
Score = 71.9 bits (36), Expect = 1e-12
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||||||||| |||||||| | |||||| | | |||||||||||| ||||
Sbjct: 114 cattcatatt-gatgttaatgaatctagacatatatatctatctagattcattaatatca 56
Query: 69 atatgaatgtgggaaa 84
||||||||||||||||
Sbjct: 55 atatgaatgtgggaaa 40
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 2e-17
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 24 gttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtggga 82
|||||| ||||||||||||||||||| | |||||||||||| ||||||||||||||||||
Sbjct: 102 gttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtggga 43
Query: 83 aatg 86
||||
Sbjct: 42 aatg 39
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 87.7 bits (44), Expect = 2e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatattttagattcattaacatcaatatgaatgt 78
||||||||||| ||||||||||||||||| | | |||||||||||||||||||||||| |
Sbjct: 49 ttgatgttaatgaatctagatagatatatgtct-agattcattaacatcaatatgaatat 107
Query: 79 gggaaatg 86
||||||||
Sbjct: 108 gggaaatg 115
Score = 48.1 bits (24), Expect = 2e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagatatatattttagattcattaacatcaat 70
||||||||||| |||||||| | |||| ||| | ||||||||||||||||||
Sbjct: 98 ttgatgttaatgaatctagacatatatctatct-agattcattaacatcaat 48
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 8e-17
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatatatattt-tagattca 59
|||||| | ||||||||||| || ||||||||| ||| || |||||||| | ||||||||
Sbjct: 39 cattttccacattcatattt-atattaataaatttagctaaatatatatgtctagattca 97
Query: 60 ttaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||
Sbjct: 98 ttaacatcaatatgaatgtgggaaatg 124
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 8e-17
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatatatattt-tagattca 59
|||||||| |||||||||| ||| ||||| |||||| |||||||||||| | ||||||||
Sbjct: 124 catttttcacattcatatt-gatattaatgaatctaaatagatatatatgtctagattca 66
Query: 60 ttaacatcaatatgaatgtgggaaatg 86
|||||| |||||| |||||||||||||
Sbjct: 65 ttaacaccaatataaatgtgggaaatg 39
Score = 60.0 bits (30), Expect = 5e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 23 tgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtg 79
||||||| |||||||| | |||||| | |||||||||||||| |||||||||||||||
Sbjct: 60 tgttaatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtg 117
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 8e-17
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatatatattt-tagattca 59
|||||| | |||||||||| ||| ||||| |||||| |||||||||||| | ||||||||
Sbjct: 124 cattttccacattcatatt-gatattaatgaatctaaatagatatatatgtctagattca 66
Query: 60 ttaacatcaatatgaatgtgggaaatg 86
||||||||| |||||||||||||||||
Sbjct: 65 ttaacatcactatgaatgtgggaaatg 39
Score = 71.9 bits (36), Expect = 1e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 20 tgatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgt 78
|||||||||| |||||||| | |||||| | |||||||||||||| ||||||||||||||
Sbjct: 57 tgatgttaatgaatctagacatatatatctatttagattcattaatatcaatatgaatgt 116
Query: 79 gggaaatg 86
|| |||||
Sbjct: 117 ggaaaatg 124
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 3e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 22 atgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtgg 80
|||||||| |||||||||| |||||||| | |||||||||||| ||||||||||||||||
Sbjct: 59 atgttaatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgg 118
Query: 81 gaaatg 86
||||||
Sbjct: 119 gaaatg 124
Score = 63.9 bits (32), Expect = 3e-10
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||| ||||| |||||||||| |||||| | | ||||||||||||||| |
Sbjct: 115 cattcatatt-gatattaatgaatctagatatatatatttatctagattcattaacatta 57
Query: 69 atatgaatgtgg 80
||||||||||||
Sbjct: 56 atatgaatgtgg 45
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 3e-16
Identities = 71/78 (91%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| ||||||||| |||||||||| |||||||| | |||||||||||||||||
Sbjct: 115 cattcatatt-gatgttaatgaatctagataaatatatatgtatagattcattaacatca 57
Query: 69 atatgaatgtgggaaatg 86
|||||||| ||| |||||
Sbjct: 56 atatgaatatggaaaatg 39
Score = 75.8 bits (38), Expect = 8e-14
Identities = 64/71 (90%), Gaps = 5/71 (7%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatattt---tagattcattaacatcaatatgaa 75
||||||||||| |||||| || |||||||||| ||||||||||||||||||||||||
Sbjct: 56 ttgatgttaatgaatcta--tacatatatatttatctagattcattaacatcaatatgaa 113
Query: 76 tgtgggaaatg 86
|||||||||||
Sbjct: 114 tgtgggaaatg 124
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 1e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 77
||||||||||| |||||||||||| |||||| | ||||||||| ||||||||||| ||||
Sbjct: 107 ttgatgttaatgaatctagatagaaatatatgtctagattcataaacatcaatataaatg 48
Query: 78 tgggaaatg 86
|||||||||
Sbjct: 47 tgggaaatg 39
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||| |||||||||||||
Sbjct: 90 tagattcattaacatcaatataaatgtgggaaatg 124
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 5e-15
Identities = 66/72 (91%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| | ||||||| ||||||||||||||||||| | ||||||||||||||| |
Sbjct: 48 cattcatattag-tgttaatgaatctagatagatatatatgtctagattcattaacatta 106
Query: 69 atatgaatgtgg 80
||||||||||||
Sbjct: 107 atatgaatgtgg 118
Score = 60.0 bits (30), Expect = 5e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 22 atgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtgg 80
|||||||| |||||||| | |||||| | | |||||||||||||| |||||||||||||
Sbjct: 104 atgttaatgaatctagacatatatatctatctagattcattaacactaatatgaatgtgg 45
Query: 81 gaaatg 86
||||||
Sbjct: 44 gaaatg 39
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 2e-14
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatatatattt-tagattca 59
||||| || |||||||||| ||| |||| ||||||||||||||||||| | ||||||||
Sbjct: 39 catttctcacattcatatt-gatactaatgaatctagatagatatatatgtctagattca 97
Query: 60 ttaacatcaatatgaatgtgggaaatg 86
||| ||||||||||||||||| |||||
Sbjct: 98 ttagcatcaatatgaatgtggtaaatg 124
Score = 52.0 bits (26), Expect = 1e-06
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 68
|||||||||| |||| |||| |||||||| | |||||| | | ||||||||||| ||||
Sbjct: 115 cattcatatt-gatgctaatgaatctagacatatatatctatctagattcattagtatca 57
Query: 69 atatgaatgtgggaaatg 86
||||||||||| ||||||
Sbjct: 56 atatgaatgtgagaaatg 39
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 77.8 bits (39), Expect = 2e-14
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatat-tttagattcattaacatca 68
||||||||||| |||||||| ||||||||||||||||||| | ||||||||||| |||||
Sbjct: 48 cattcatattt-atgttaatgaatctagatagatatatatgtctagattcattatcatca 106
Query: 69 atatgaatgtg 79
|||| ||||||
Sbjct: 107 atataaatgtg 117
Score = 69.9 bits (35), Expect = 5e-12
Identities = 76/87 (87%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatatatattt-tagattca 59
|||||||| |||| ||||| |||| |||| |||||||| | |||||| | | ||||||||
Sbjct: 124 catttttcacatttatatt-gatgataatgaatctagacatatatatctatctagattca 66
Query: 60 ttaacatcaatatgaatgtgggaaatg 86
||||||| |||||||||||||||||||
Sbjct: 65 ttaacataaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 75.8 bits (38), Expect = 8e-14
Identities = 71/78 (91%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatat-tttagattcattaacatca 68
|||||||||| ||||||||| ||||||| | ||| |||| |||||||||||||||||||
Sbjct: 48 cattcatatt-gatgttaatgaatctagc-acatacatatgtttagattcattaacatca 105
Query: 69 atatgaatgtgggaaatg 86
||||||||||||||||||
Sbjct: 106 atatgaatgtgggaaatg 123
Score = 73.8 bits (37), Expect = 3e-13
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattttagattcattaacatcaa 69
|||||||||| ||||||||| |||||| | | || ||| | ||||||||||||||||||
Sbjct: 114 cattcatatt-gatgttaatgaatctaaacatatgtatgtgctagattcattaacatcaa 56
Query: 70 tatgaatgtgggaaatg 86
|||||||||||||||||
Sbjct: 55 tatgaatgtgggaaatg 39
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 3e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatg 77
|||||| |||| ||| ||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 56 ttgatgctaatgaatttagatagatatatatgtttagattcattagcatcaatatgaata 115
Query: 78 tgggaaatg 86
|| ||||||
Sbjct: 116 tgagaaatg 124
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 3e-13
Identities = 69/77 (89%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatatatat-tttagattca 59
||||| || |||||||||| ||||||||| ||||||||||||||||||| | ||||||||
Sbjct: 39 catttctcacattcatatt-gatgttaatgaatctagatagatatatatgtctagattca 97
Query: 60 ttaacatcaatatgaat 76
|||| ||||| ||||||
Sbjct: 98 ttaatatcaacatgaat 114
Score = 65.9 bits (33), Expect = 8e-11
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 77
||||| ||||| |||||||| | |||||| | | ||||||||||||||||||||||||||
Sbjct: 107 ttgatattaatgaatctagacatatatatctatctagattcattaacatcaatatgaatg 48
Query: 78 tgggaaatg 86
|| ||||||
Sbjct: 47 tgagaaatg 39
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 73.8 bits (37), Expect = 3e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 50 tttagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||||
Sbjct: 75 tttagattcattaacatcaatatgaatgtgggaaatg 39
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaa 75
||||||||||||||||||||||||
Sbjct: 82 tagattcattaacatcaatatgaa 105
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 73.8 bits (37), Expect = 3e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 31 aatctagatagatatatattt-tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||| | ||||||||||||||||||||||||| || ||||||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatg 39
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 73.8 bits (37), Expect = 3e-13
Identities = 69/77 (89%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattttagattcattaacatcaa 69
|||||||||| ||||||||| ||| |||| | |||||| | | |||||||||||||||||
Sbjct: 48 cattcatatt-gatgttaatgaatgtagacatatatatgtct-agattcattaacatcaa 105
Query: 70 tatgaatgtgggaaatg 86
|||||||||||||||||
Sbjct: 106 tatgaatgtgggaaatg 122
Score = 58.0 bits (29), Expect = 2e-08
Identities = 61/69 (88%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattttagattcattaacatcaa 69
|||||||||| ||||||||| |||||||| | |||||| | | | |||||||||||||||
Sbjct: 113 cattcatatt-gatgttaatgaatctagacatatatatgtct-acattcattaacatcaa 56
Query: 70 tatgaatgt 78
|||||||||
Sbjct: 55 tatgaatgt 47
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 1e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatg 77
||||||||||| |||||||||||||||| || | || |||||||||||||||||||||||
Sbjct: 56 ttgatgttaatgaatctagatagatatagatgtctatattcattaacatcaatatgaatg 115
Score = 56.0 bits (28), Expect = 7e-08
Identities = 69/80 (86%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 8 cgcattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacat 66
|||||||||||| ||||||||| ||| |||| | ||||| | | |||||||||||||||
Sbjct: 117 cgcattcatatt-gatgttaatgaatatagacatctatatctatctagattcattaacat 59
Query: 67 caatatgaatgtgggaaatg 86
|||||||||| | |||||||
Sbjct: 58 caatatgaatataggaaatg 39
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 69.9 bits (35), Expect = 5e-12
Identities = 51/55 (92%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 32 atctagatagatatatattttagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| | | |||| |||||||||||||||||||||||||||||
Sbjct: 42 atctagatagatatatgtct-agatccattaacatcaatatgaatgtgggaaatg 95
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 74 tagattcattaacatcaatatgaatgtgggaaatg 40
Score = 48.1 bits (24), Expect = 2e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatat 45
|||||||||| ||||||||| |||||||||||||||
Sbjct: 49 cattcatatt-gatgttaatgaatctagatagatat 83
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatg 39
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaat 76
|||||||||||||||||||||||||
Sbjct: 78 tagattcattaacatcaatatgaat 102
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 5e-12
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaat 76
||||||||||| | ||||||||||||||||| | ||||||||||| |||||||||||||
Sbjct: 56 ttgatgttaatgactctagatagatatatatgtctagattcattagcatcaatatgaat 114
Score = 50.1 bits (25), Expect = 5e-06
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 77
|||||| |||| |||||||| | |||||| | | |||| ||||||||||||||| |||||
Sbjct: 107 ttgatgctaatgaatctagacatatatatctatctagagtcattaacatcaatacgaatg 48
Query: 78 tgggaaatg 86
||| |||||
Sbjct: 47 tggaaaatg 39
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatg 39
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 81 tagattcattaacatcaatatgaatgtgggaaatg 115
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 78 tagattcattaacatcaatatgaatgtgggaaatg 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaat 76
|||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 69.9 bits (35), Expect = 5e-12
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| ||||||| | ||||||||| | ||||||||||||||| ||||||||||||
Sbjct: 58 gatgttaatgaatctagttggatatatatgtctagattcattaacattaatatgaatgtg 117
Query: 80 ggaaatg 86
||||||
Sbjct: 118 agaaatg 124
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| |||||||| |||| ||||
Sbjct: 73 tagattcattaacatccatatgaatatgggtaatg 39
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatg 39
Score = 58.0 bits (29), Expect = 2e-08
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 10 cattcatatttgatgttaataaatctagatagatatatattttagattcattaacatcaa 69
|||||||||| ||||||||| ||||||||||| |||| | |||||||||||||||||
Sbjct: 48 cattcatatt-gatgttaatgaatctagataggcatatgtcc-agattcattaacatcaa 105
Query: 70 tatgaatgtgggaaatg 86
||| || ||||||||||
Sbjct: 106 tataaacgtgggaaatg 122
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatg 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 59 attaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||| |||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatg 35
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 69.9 bits (35), Expect = 5e-12
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtg 79
||||||||| |||||||| | ||||||| ||||||||||| |||||| |||||||||||
Sbjct: 58 gatgttaatgaatctagacatctatatatatttagattcatcaacatctatatgaatgtg 117
Query: 80 ggaaatg 86
|||||||
Sbjct: 118 ggaaatg 124
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||| ||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgagaaatg 39
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 67 tagattcattaacatcaatatgaatgtgggaaatg 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 61 taacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||| |||||
Sbjct: 64 taacatcaatatgaatgtggaaaatg 39
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 5e-12
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| |||||||| | | |||||||| |||||||||||||||| |||||||||||
Sbjct: 58 gatgttaatgaatctagacacacatatatttctagattcattaacatctatatgaatgtg 117
Query: 80 ggaaatg 86
|| ||||
Sbjct: 118 ggcaatg 124
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtg 79
|||||||||||||||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 5e-12
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| |||||||| | | |||||||| |||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaatctagacacacatatatttctagattcattaacatctatatgaatgtg 46
Query: 80 ggaaatg 86
|| ||||
Sbjct: 45 ggcaatg 39
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtg 79
|||||||||||||||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgtg 117
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatg 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 59 attaacatcaatatgaatgtgggaaatg 86
|||||||| |||||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 68 tagattcattaacatcaatatgaatgtgggaaatg 102
Score = 48.1 bits (24), Expect = 2e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatat 45
|||||||||| ||||||||| |||||||||||||||
Sbjct: 93 cattcatatt-gatgttaatgaatctagatagatat 59
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| |||||||| | |||||||| | |||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtg 46
Query: 80 gg 81
||
Sbjct: 45 gg 44
Score = 50.1 bits (25), Expect = 5e-06
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaat 76
||||||||| |||||||| | |||||| | | |||||||||||||||| ||||||||
Sbjct: 58 gatgttaatgaatctagacatatatatgtgtctagattcattaacatctatatgaat 114
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 65.9 bits (33), Expect = 8e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 54 gattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatg 39
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 54 gattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||| ||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatg 107
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 8e-11
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatg 77
|||||| |||| ||||||||||||||||||| | |||||||||| |||| |||||||||
Sbjct: 107 ttgatgctaatgaatctagatagatatatatgtctagattcattggcatcgatatgaatg 48
Query: 78 tgggaaatg 86
||| |||||
Sbjct: 47 tggaaaatg 39
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 65.9 bits (33), Expect = 8e-11
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatattttagattcattaacatcaatatgaatgt 78
||||| ||||| |||||||||||||||| | |||||||||||| ||||||||||| ||
Sbjct: 22 ttgatattaatgaatctagatagatataa--tctagattcattaatatcaatatgaacgt 79
Query: 79 gggaaatg 86
||||||||
Sbjct: 80 gggaaatg 87
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||| ||||||||||| ||||||||||
Sbjct: 39 tagattcattaatatcaatatgaacgtgggaaatg 5
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 65.9 bits (33), Expect = 8e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 50 tttagattcattaacatcaatatgaatgtggga 82
|||||||||||||||||||||||||||||||||
Sbjct: 62 tttagattcattaacatcaatatgaatgtggga 94
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 65.9 bits (33), Expect = 8e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 54 gattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatg 100
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 55 attcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||||||||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatg 114
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||| ||||| |||||||||||||
Sbjct: 73 tagattcattaacattaatataaatgtgggaaatg 39
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||| |||||||||
Sbjct: 71 tagattcattaacatcaatatgaatatgggaaatg 105
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatg 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 59 attaacatcaatatgaatgtgggaaatg 86
|||||||| |||||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||||| |||||||
Sbjct: 55 tagattcattaacatcaatatgaatgtaggaaatg 89
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatg 39
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 56 ttcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||| ||||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatg 115
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||| ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatg 39
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||| ||||||||||||||||||||||||
Sbjct: 39 tagattcattgacatcaatatgaatgtgggaaatg 5
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||| ||||||||||||||||||||||||
Sbjct: 50 tagattcattgacatcaatatgaatgtgggaaatg 84
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| |||||||||||||||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgggaaatg 39
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 58 cattaacatcaatatgaatgtgggaaatg 86
||||| |||||||||||||||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatg 108
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatg 39
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 56 ttcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||
Sbjct: 82 ttcattaacatcaatatgaatgtgggaaatg 112
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||| ||||||||||||||||||||||||
Sbjct: 73 tagattcattgacatcaatatgaatgtgggaaatg 39
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 aacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatg 101
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 1e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtg 79
||||||||| |||||||||| | | |||| ||||||||||||| |||| |||||||||||
Sbjct: 58 gatgttaatgaatctagatatagacatatgtttagattcattaccatctatatgaatgtg 117
Query: 80 ggaaatg 86
|| ||||
Sbjct: 118 ggcaatg 124
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||| |||||||||||||||||||||||||||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatg 112
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||| ||||||||||||||||||||||| |||||
Sbjct: 73 tagatacattaacatcaatatgaatgtggaaaatg 39
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatg 96
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatg 39
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||| ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatg 39
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||| |||||||||||||||||||||||||||||
Sbjct: 47 tagatacattaacatcaatatgaatgtgggaaatg 13
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||| |||||||||||||||||||||||||||||
Sbjct: 77 tagatacattaacatcaatatgaatgtgggaaatg 111
Score = 44.1 bits (22), Expect = 3e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 10 cattcatatttgatgttaataaatctagatagatatat 47
|||||||||| ||||||||| ||||||||||||||||
Sbjct: 102 cattcatatt-gatgttaatgtatctagatagatatat 66
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| |||||||||||||||||||||||
Sbjct: 75 tagattcattagcatcaatatgaatgtgggaaatg 109
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 58 cattaacatcaatatgaatgtgggaaatg 86
||||| |||||||||||||||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatg 40
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatg 39
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 90 tagattcattaacatcaatatgaatgtggaaaatg 124
Score = 50.1 bits (25), Expect = 5e-06
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatatatattt-tagattca 59
|||||| | |||||||||| ||||||||| |||||||| |||||||| ||||||||
Sbjct: 124 cattttccacattcatatt-gatgttaatgaatctagacttatatatatgcctagattca 66
Query: 60 ttaacatcaatatgaatgtgg 80
||| |||| ||||||||||||
Sbjct: 65 ttagcatctatatgaatgtgg 45
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||| ||||||||||||||||||||||
Sbjct: 47 tagattcattaatatcaatatgaatgtgggaaatg 81
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 61.9 bits (31), Expect = 1e-09
Identities = 76/87 (87%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatatatattt-tagattca 59
||||| || |||||||||| |||| |||| |||||||||||| |||||| | ||||||||
Sbjct: 39 catttctcacattcatatt-gatggtaatgaatctagataga-atatatatctagattca 96
Query: 60 ttaacatcaatatgaatgtgggaaatg 86
||||||| ||||| ||| |||||||||
Sbjct: 97 ttaacattaatataaatatgggaaatg 123
Score = 58.0 bits (29), Expect = 2e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 22 atgttaataaatctagatagatatatattttagattcattaacatcaatatgaatgtggg 81
|||||||| |||||||||| |||| | ||||||||||| |||||||||||||||| |
Sbjct: 103 atgttaatgaatctagatatatattctatctagattcattaccatcaatatgaatgtgag 44
Query: 82 aaatg 86
|||||
Sbjct: 43 aaatg 39
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||| ||||||||||||||||||||||||
Sbjct: 73 tagattcattgacatcaatatgaatgtgggaaatg 39
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||| ||||||||||||||||||||||||
Sbjct: 84 tagattcattgacatcaatatgaatgtgggaaatg 118
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| |||||||||||||||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgggaaatg 39
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| ||||||||||||||| |||||||
Sbjct: 84 tagattcattagcatcaatatgaatgtaggaaatg 118
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 56 ttcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatg 39
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatg 39
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||| |||||||||
Sbjct: 72 tagattcattaacatcaatatgaatatgggaaatg 106
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 1e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtg 79
||||||||| |||||||| | |||||| | |||||||||||||||||| | |||||||||
Sbjct: 105 gatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtg 46
Query: 80 ggaaatg 86
|| ||||
Sbjct: 45 ggtaatg 39
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 71 tagattcattaacatcaatatgaatgtggaaaatg 105
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||||||| ||||||
Sbjct: 59 tagattcattaacatcaatatgaatgtgagaaatg 93
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 53 agattcattaacatcaatatgaatgtgggaaatg 86
|||||||||| |||||||||||||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatg 39
Score = 56.0 bits (28), Expect = 7e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 59 attaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatg 103
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 5e-09
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatatatattttagattcat 60
|||||||| |||||||| | |||||||| |||||||||| |||||| | | | ||||||
Sbjct: 122 catttttcacattcatactc-atgttaatgaatctagatatatatatgtctaa-attcat 65
Query: 61 taacatcaatatgaatgtgggaaatg 86
|||||| | |||||||||||||||||
Sbjct: 64 taacatgagtatgaatgtgggaaatg 39
Score = 44.1 bits (22), Expect = 3e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 22 atgttaataaatctagatagatatatattttagattcattaacatcaatatgaatgtg 79
|||||||| ||| |||| | |||||||| | |||||||||||||| | ||||||||||
Sbjct: 59 atgttaatgaatttagacatatatatatct-agattcattaacatgagtatgaatgtg 115
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaat 85
|||||||||||||||||||||||||||| |||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaat 40
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 60.0 bits (30), Expect = 5e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 56 ttcattaacatcaatatgaatgtgggaaat 85
||||||||||||||||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaat 40
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 47 tattttagattcattaacatcaatatgaatgtgggaaat 85
||||| || ||||||||||||||||| ||||||||||||
Sbjct: 78 tatttaagtttcattaacatcaatataaatgtgggaaat 116
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaat 85
|||||||||||||||||||||||||||| |||||
Sbjct: 79 tagattcattaacatcaatatgaatgtgagaaat 112
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 60.0 bits (30), Expect = 5e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 22 atgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtgg 80
|||||||| |||||||||| |||||| | |||||||||||||||| ||||||||||||
Sbjct: 35 atgttaatgaatctagatatatatatgtgcctagattcattaacatctatatgaatgtgg 94
Query: 81 gaaatg 86
| ||||
Sbjct: 95 gcaatg 100
Score = 54.0 bits (27), Expect = 3e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| ||||||| | |||||||| | ||||||||||||||| |||||||||||
Sbjct: 81 gatgttaatgaatctaggcacatatatatatctagattcattaacatatatatgaatgtg 22
Query: 80 ggaaatg 86
|| ||||
Sbjct: 21 ggcaatg 15
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa
Indica Group
Length = 134
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaat 85
||||||||||||||||||||||||||||| ||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaat 95
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 5e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatg 77
|||||||||||||||||| | ||| |||| |||||||||||||||||| | |||||||
Sbjct: 105 gatgttaataaatctagacatatacatatgtttagattcattaacatctaaatgaatg 48
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 50 tttagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||| ||||||||||||| ||||
Sbjct: 62 tttagattcattaacatctatatgaatgtgggcaatg 98
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| || ||||||| ||| |||| | |||||||||||||||| |||||||||||
Sbjct: 58 gatgttaatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtg 117
Query: 80 g 80
|
Sbjct: 118 g 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 53/62 (85%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| |||||||| | || ||||| | ||| |||||||||||| |||||||| ||
Sbjct: 105 gatgttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatg 46
Query: 80 gg 81
||
Sbjct: 45 gg 44
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 54 gattcattaacatcaatatgaatgtgggaaatg 86
||||||||| |||||||||||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatg 39
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 54 gattcattaacatcaatatgaatgtgggaaatg 86
||||||||| |||||||||||||||||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatg 104
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 31 aatctagatagatatatattt-tagattcattaacatcaatatgaatgtgggaaatg 86
|||||| |||||||||||| | |||||||| |||| || ||||||||||||||||||
Sbjct: 68 aatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa
Japonica Group
Length = 136
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 50 tttagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||| ||||||||||||| ||||
Sbjct: 62 tttagattcattaacatctatatgaatgtgggcaatg 98
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 23 tgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtggg 81
||||||| |||||||| | ||||||| | |||||||||||||| | |||||||||||||
Sbjct: 103 tgttaatgaatctagacatctatatatatctagattcattaacacctatatgaatgtggg 44
Query: 82 aaatg 86
|||||
Sbjct: 43 aaatg 39
Score = 58.0 bits (29), Expect = 2e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 23 tgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtggg 81
||||||| |||||||||| ||||| || | |||||||||||||| | ||||||||||||
Sbjct: 60 tgttaatgaatctagatatatatagatgtctagattcattaacacctatatgaatgtgga 119
Query: 82 aaatg 86
|||||
Sbjct: 120 aaatg 124
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 54 gattcattaacatcaatatgaatgtgggaaatg 86
||||||||| |||||||||||||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatg 13
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 54 gattcattaacatcaatatgaatgtgggaaatg 86
||||||||| |||||||||||||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatg 78
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtg 79
||||||||| |||||||| | |||| | | |||||||||||||||||| |||||||||||
Sbjct: 58 gatgttaatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtg 117
Query: 80 g 80
|
Sbjct: 118 g 118
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgt 78
|||||||||||||||| ||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgt 47
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| || ||||||| ||| |||| | |||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtg 46
Query: 80 g 80
|
Sbjct: 45 g 45
Score = 44.1 bits (22), Expect = 3e-04
Identities = 53/62 (85%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| |||||||| | || ||||| | ||| |||||||||||| |||||||| ||
Sbjct: 58 gatgttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatg 117
Query: 80 gg 81
||
Sbjct: 118 gg 119
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 58.0 bits (29), Expect = 2e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 23 tgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtggg 81
||||||| |||||||||| ||||| || | |||||||||||||| | ||||||||||||
Sbjct: 73 tgttaatgaatctagatatatatagatgtctagattcattaacacctatatgaatgtgga 14
Query: 82 aaatg 86
|||||
Sbjct: 13 aaatg 9
Score = 58.0 bits (29), Expect = 2e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 23 tgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtggg 81
||||||| |||||||| | ||||||| | |||||||||||||| | |||||||||||||
Sbjct: 30 tgttaatgaatctagacatctatatatatctagattcattaacacctatatgaatgtggg 89
Query: 82 aaatg 86
|||||
Sbjct: 90 aaatg 94
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 58.0 bits (29), Expect = 2e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatat 45
|||||||| |||||||||| ||||||||| |||||||||||||||
Sbjct: 96 catttttcacattcatatt-gatgttaatgaatctagatagatat 53
Score = 56.0 bits (28), Expect = 7e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtg 79
||||||||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtg 89
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 7e-08
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| |||||||||| | | |||| | |||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaatctagatatagacatatatctagattcattaacatccatatgaatgtg 46
Score = 50.1 bits (25), Expect = 5e-06
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaat 76
||||||||| |||||||||| || | ||| | |||||||||||||||| ||||||||
Sbjct: 58 gatgttaatgaatctagatatatgtctatatctagattcattaacatctatatgaat 114
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 7e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 55 attcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||| |||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatg 80
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa
Japonica Group
Length = 148
Score = 56.0 bits (28), Expect = 7e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 55 attcattaacatcaatatgaatgtgggaaatg 86
|||||| |||||||||||||||||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatg 39
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||| || |||||||||||||||||||||||||
Sbjct: 76 tagatttatgaacatcaatatgaatgtgggaaatg 110
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 7e-08
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| |||||||||| |||| | | | |||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtg 46
Score = 54.0 bits (27), Expect = 3e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| |||||||| | | |||||| | |||||||||||||||| || ||||||||
Sbjct: 58 gatgttaatgaatctagacacacatatatatctagattcattaacatctatgtgaatgtg 117
Query: 80 ggaaatg 86
|| ||||
Sbjct: 118 ggcaatg 124
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 7e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 55 attcattaacatcaatatgaatgtgggaaatg 86
|||||||| |||||||||||||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatg 80
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 56.0 bits (28), Expect = 7e-08
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| |||||||| | |||||||| | |||||||||| ||||| |||||||||||
Sbjct: 34 gatgttaatgaatctagacacatatatatgtctagattcatttacatctatatgaatgtg 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtggg 81
|||||||||||||||| |||||||||||||
Sbjct: 49 tagattcattaacatctatatgaatgtggg 20
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 45 tagattcattaacatccatatgaatgtgggcaatg 11
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 68 tagattcattaacatccatatgaatgtgggcaatg 102
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||| ||| |||||
Sbjct: 77 tagattcattaacatcaatatgaatatggaaaatg 111
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||| |||||||||||||| |||||| ||||||
Sbjct: 73 tagatttattaacatcaatataaatgtgagaaatg 39
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatg 39
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatg 39
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 56 ttcattaacatcaatatgaatgtgggaaatg 86
||||||| |||||||||||||||||||||||
Sbjct: 35 ttcattagcatcaatatgaatgtgggaaatg 5
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||| |||| |||||||||||||||||||||||
Sbjct: 78 tagatttattagcatcaatatgaatgtgggaaatg 112
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| |||||||||||||||| ||||||
Sbjct: 57 tagattcattagcatcaatatgaatgtgagaaatg 91
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 55 attcattaacatcaatatgaatgtgggaaatg 86
|||||||| |||||||||||||||| ||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatg 18
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| ||| |||||||||||||||||||
Sbjct: 64 tagattcattagcattaatatgaatgtgggaaatg 98
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 65 atcaatatgaatgtgggaaatg 86
||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 54.0 bits (27), Expect = 3e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 25 ttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtgggaa 83
||||| |||||||| ||||||||| | ||||||||||| |||||||||| ||||| |||
Sbjct: 62 ttaatgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaa 121
Query: 84 atg 86
|||
Sbjct: 122 atg 124
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||| || | |||||||||||||||||
Sbjct: 73 tagattcattaatataagtatgaatgtgggaaatg 39
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||| ||||||||||||||||| ||||||
Sbjct: 90 tagattcattgacatcaatatgaatgtgagaaatg 124
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 66 tagattcattaacatctatatgaatgtgggcaatg 100
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| ||| |||||||||||||||||||
Sbjct: 73 tagattcattagcattaatatgaatgtgggaaatg 39
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 atcaatatgaatgtgggaaatg 86
||||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatg 98
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatg 39
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatg 126
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 3e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
|||| |||| |||||||||| |||||||| | |||||||||| |||| |||||||||||
Sbjct: 105 gatgctaatgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtg 46
Query: 80 ggaaatg 86
| |||||
Sbjct: 45 gaaaatg 39
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 66 tagattcattaacatctatatgaatgtgggcaatg 100
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 91 tagattcattaacatctatatgaatgtgggcaatg 125
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||| |||||||||||||||||| |||||||||
Sbjct: 68 tagatttattaacatcaatatgaatatgggaaatg 102
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||| || |||||||||||||||||||
Sbjct: 67 tagattcattaatataaatatgaatgtgggaaatg 101
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 58 tagattcattaacatctatatgaatgtgggcaatg 92
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatg 106
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||| ||||||||||||||| ||||||
Sbjct: 73 tagattcattaatatcaatatgaatgtgagaaatg 39
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 53 agattcattaacatcaatatgaatgtgggaaatg 86
|||||||||| |||||||||||||||| ||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatg 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 57 tcattaacatcaatatgaatgtgggaaatg 86
|||||| |||||||||||||||| ||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatg 39
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 52.0 bits (26), Expect = 1e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 22 atgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtgg 80
|||||||| |||||| | | ||| |||| |||||||||||||||||| | ||||||||||
Sbjct: 104 atgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgg 45
Query: 81 gaaatg 86
| ||||
Sbjct: 44 gtaatg 39
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 52.0 bits (26), Expect = 1e-06
Identities = 73/86 (84%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 1 catttttcgcattcatatttgatgttaataaatctagatagatatatattttagattcat 60
|||||||| ||||||||| ||||||||| |||||| | |||||| | || |||||||
Sbjct: 122 catttttcacattcatata-gatgttaatgaatctatgcatatatatgtctt-gattcat 65
Query: 61 taacatcaatatgaatgtgggaaatg 86
||||||| | ||||||||||||||||
Sbjct: 64 taacatctacatgaatgtgggaaatg 39
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtg 79
|||||||||||||||| |||||||||||
Sbjct: 88 tagattcattaacatctatatgaatgtg 115
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaat 85
||||||||||| ||||||||||||| ||||||||
Sbjct: 68 tagattcattagcatcaatatgaatatgggaaat 101
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtggg 81
|||||||||||||||| |||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgtggg 119
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 1e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 22 atgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtgg 80
|||||||| |||||||| | | |||||| |||||||||||| | ||| ||||||||||||
Sbjct: 59 atgttaatgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgg 118
Query: 81 gaaatg 86
| ||||
Sbjct: 119 gcaatg 124
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtggg 81
||||||||||||||| |||||||||||||
Sbjct: 73 tagattcattaacatatatatgaatgtggg 44
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaat 85
||||||||||| |||||||||||||||||||||
Sbjct: 73 tagattcattagtatcaatatgaatgtgggaaat 40
Score = 52.0 bits (26), Expect = 1e-06
Identities = 53/61 (86%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 26 taataaatctagatagatatatattttagattcattaacatcaatatgaatgtgggaaat 85
|||| |||||||||||||||| | ||||| |||| ||||||||||||||||||||||
Sbjct: 63 taatgaatctagatagatatag--tctagatccattggcatcaatatgaatgtgggaaat 120
Query: 86 g 86
|
Sbjct: 121 g 121
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaat 85
|||||| |||||||||| ||||||||||||||||
Sbjct: 76 tagatttattaacatcactatgaatgtgggaaat 109
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 tgatgttaataaatctagatagatatat 47
||||||||||||||||||||| ||||||
Sbjct: 92 tgatgttaataaatctagatatatatat 65
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 53 agattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| |||||| |||||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatg 101
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 57 tcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||| |||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatg 39
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 61 taacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||| |||||
Sbjct: 69 taacatcaatatgaatgtggaaaatg 94
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtggg 81
|||||||||||||||| |||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtggg 44
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtggg 81
|||||||||||||||| |||||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/61 (88%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctaga--tagatatatattttagattcattaacatcaatatgaatgt 78
||||||||| |||||||| |||| |||||| | ||||||||||||||| ||||||||||
Sbjct: 58 gatgttaatgaatctagacatagacatatatct-agattcattaacatccatatgaatgt 116
Query: 79 g 79
|
Sbjct: 117 g 117
Score = 50.1 bits (25), Expect = 5e-06
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaat 76
||||||||| |||||||||| || | ||| | |||||||||||||||| ||||||||
Sbjct: 105 gatgttaatgaatctagatatatgtctatgtctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 57 tcattaacatcaatatgaatgtgggaaatg 86
||||||||||| ||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatg 96
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 60 ttaacatcaatatgaatgtgggaaatg 86
|||||||| ||||||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatg 39
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 53 agattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||| ||||||||||||| ||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaatg 39
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 50 tttagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||| |||||||||||| || ||||||
Sbjct: 56 tttagattcattaatatcaatatgaatatgagaaatg 92
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagat 43
|||||||||||||||||||||||||
Sbjct: 94 ttgatgttaataaatctagatagat 70
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 64 catcaatatgaatgtgggaaatg 86
|||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaat 76
|||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgg 80
|||||||||||||||| ||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgg 92
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 50 tttagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||| ||||| ||||||| ||||
Sbjct: 66 tttagattcattaacatctatatgtatgtgggtaatg 102
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 50.1 bits (25), Expect = 5e-06
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 39 tagatatatattt-tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| | ||||||||||||||| ||||||||||||| ||||
Sbjct: 53 tagatatatatgtctagattcattaacatatatatgaatgtgggcaatg 5
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||| ||||||||||||| ||||
Sbjct: 52 tagattcattaacatatatatgaatgtgggcaatg 86
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 50 tttagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||| ||||| ||||||| ||||
Sbjct: 75 tttagattcattaacatctatatgtatgtgggtaatg 39
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 50.1 bits (25), Expect = 5e-06
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 50 tttagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| ||||||||||||||||||| |||||
Sbjct: 74 tttagattcat-aacatcaatatgaatgtggaaaatg 39
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaat 76
|||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaat 49
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 attaacatcaatatgaatgtgggaaat 85
|||||||||||||||||||| ||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaat 103
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 57 tcattaacatcaatatgaatgtgg 80
||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 55 attcattaacatcaatatgaatgtgggaaatg 86
||||||||||||| ||||||||||||| ||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatg 108
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtg 79
||||||||||| ||||||||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtg 46
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 55 attcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||| ||| |||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatg 39
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtg 79
|||||||||||||||| |||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtg 91
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 acatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatg 104
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| ||||| ||||||||||| |||||
Sbjct: 73 tagattcattagcatcagtatgaatgtggaaaatg 39
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 55 attcattaacatcaatatgaatgtgggaaatg 86
||||||||||||| ||||||||||||| ||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatg 39
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 55 attcattaacatcaatatgaatgtgggaaatg 86
||||||||| |||||||||||||| |||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatg 92
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagatata 46
||||||||||| ||||||||||||||||
Sbjct: 79 ttgatgttaatgaatctagatagatata 52
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatg 73
||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatg 83
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 55 attcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||||||||| ||| |||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatg 39
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 57 tcattaacatcaatatgaatgtgg 80
||||||||||||||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtgg 112
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 55 attcattaacatcaatatgaatgtgggaaatg 86
||||||||||| ||||||||||||| ||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatg 39
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 acatcaatatgaatgtgggaaatg 86
||||||||||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatg 98
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| ||||||||| ||| |||||||||
Sbjct: 73 tagattcattagcatcaatataaatatgggaaatg 39
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||| |||| |||||||||||| ||||||
Sbjct: 70 tagattcattgacataaatatgaatgtgagaaatg 104
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| |||| ||||||||||||| ||||
Sbjct: 70 tagattcattagcatctatatgaatgtgggcaatg 104
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| |||||||| |||| ||||
Sbjct: 90 tagattcattaacatctatatgaatatgggtaatg 124
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||| |||||||| ||||||||||||| ||||
Sbjct: 73 tagattcgttaacatctatatgaatgtgggcaatg 39
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||||||||| | ||||| |||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatg 39
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| |||| ||||||||||||| ||||
Sbjct: 90 tagattcattagcatctatatgaatgtgggcaatg 124
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgt 78
|||||||||||||||| ||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgt 47
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||| ||||||| ||||
Sbjct: 64 tagattcattaacatctatatgcatgtgggcaatg 98
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| ||||||||| ||||||| |||||
Sbjct: 84 tagattcattagcatcaatataaatgtggaaaatg 118
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||| |||| ||||||||||||| ||||
Sbjct: 90 tagattcattagcatctatatgaatgtgggcaatg 124
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||||||| ||| ||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatg 124
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||||| ||||| ||||||| ||||
Sbjct: 79 tagattcattaacatctatatgtatgtgggcaatg 113
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||| ||||||||||||| ||||
Sbjct: 64 tagattcattaacatatatatgaatgtgggtaatg 98
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 7e-05
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 21 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 79
||||||||| |||||| ||| ||| |||| | |||||||||||||||| | |||||| ||
Sbjct: 105 gatgttaatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatg 46
Query: 80 ggaaatg 86
|| ||||
Sbjct: 45 ggcaatg 39
Score = 44.1 bits (22), Expect = 3e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 21 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatg 73
||||||||| |||||||| | || ||| | |||||||||||||||||| |||||
Sbjct: 58 gatgttaatgaatctagacatatgtatgtatttagattcattaacatccatatg 111
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
|||||| ||||||||| ||||||||||||| ||||
Sbjct: 66 tagatttattaacatctatatgaatgtgggcaatg 100
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 46.1 bits (23), Expect = 7e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 19 ttgatgttaataaatctagatagatatatat 49
|||||| |||| |||||||||||||||||||
Sbjct: 56 ttgatgataatgaatctagatagatatatat 86
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagatat 45
||||||||||| |||||||||||||||
Sbjct: 79 ttgatgttaatgaatctagatagatat 53
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 46.1 bits (23), Expect = 7e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 56 ttcattaacatcaatatgaatgtgggaaatg 86
||||||||||||| ||| |||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatg 87
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 59 attaacatcaatatgaatgtgggaaat 85
|||||||||||||||||||||| ||||
Sbjct: 66 attaacatcaatatgaatgtggaaaat 40
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 gattcattaacatcaatatgaatgtgg 80
|||||||||||||| ||||||||||||
Sbjct: 73 gattcattaacatctatatgaatgtgg 99
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
||||||||||||||| ||||||||| ||| |||||
Sbjct: 66 tagattcattaacattaatatgaatatggaaaatg 100
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 46.1 bits (23), Expect = 7e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 51 ttagattcattaacatcaatatgaatgtggg 81
||||||||||||||||| ||||| |||||||
Sbjct: 33 ttagattcattaacatctatatgtatgtggg 63
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtggg 81
|||||||||||||||| ||||| |||||||
Sbjct: 30 tagattcattaacatctatatgtatgtggg 1
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 tttagattcattaacatcaatatgaatgtg 79
|||||||||||||||||| ||||| |||||
Sbjct: 88 tttagattcattaacatctatatgtatgtg 117
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 57 tcattaacatcaatatgaatgtgggaaatg 86
||||||||||| |||||||||||| |||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatg 39
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 42 atatatat-tttagattcattaacatcaatatgaatgtgggaaatg 86
|||||||| |||| |||||||| |||| |||||||||||| |||||
Sbjct: 79 atatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtggg 81
|||||||||||||||| |||||||| ||||
Sbjct: 90 tagattcattaacatctatatgaatatggg 119
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 atcaatatgaatgtgggaaatg 86
||||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatg 102
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 ttgatgttaataaatctagatagata 44
|||||||||||||||||| |||||||
Sbjct: 88 ttgatgttaataaatctatatagata 63
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 61 taacatcaatatgaatgtgggaaatg 86
|||||||||| |||||||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatg 39
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 atcaatatgaatgtgggaaatg 86
||||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatg 102
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 agattcattaacatcaatatgaatgtgggaaatg 86
|||||||||||||| ||||||||||||| ||||
Sbjct: 91 agattcattaacatatatatgaatgtgggcaatg 124
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtggg 81
|||||||||||||||| | |||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtggg 44
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 65 atcaatatgaatgtgggaaatg 86
||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatg 39
