miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 133 bits (67), Expect = 6e-31
Identities = 70/71 (98%)
Strand = Plus / Minus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 100
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 99 taatgaatcta 89
Score = 121 bits (61), Expect = 2e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 54.0 bits (27), Expect = 4e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagtaa 115
||||||||||||||||||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagtaa 4
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 125 tagaatgacttacattgtgaaacgg 149
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 133 bits (67), Expect = 6e-31
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 64 atgaatc 70
|||||||
Sbjct: 65 atgaatc 71
Score = 125 bits (63), Expect = 1e-28
Identities = 66/67 (98%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 64 atgaatc 70
|||||||
Sbjct: 78 atgaatc 72
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 133 bits (67), Expect = 6e-31
Identities = 95/103 (92%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 64 atgaatctatataaat-atagaatgacttacattgtgaaacgg 105
||||||||| ||| || |||||||||||||||||||||||||
Sbjct: 55 atgaatctagatatatgctagaatgacttacattgtgaaacgg 13
Score = 73.8 bits (37), Expect = 4e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcat 40
|||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 83 tagaatgacttacattatgaaac-ggaggaagta 115
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 133 bits (67), Expect = 6e-31
Identities = 76/79 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 64 atgaatctatataaatata 82
||||||||| |||||||||
Sbjct: 98 atgaatctagataaatata 80
Score = 119 bits (60), Expect = 8e-27
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 63 aatgaatctata 74
||||||||||||
Sbjct: 64 aatgaatctata 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 126 tagaatgacttacattgtgaaac-ggaggaagta 158
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 133 bits (67), Expect = 6e-31
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatctatataaatata 82
||||||||| ||| |||||
Sbjct: 65 atgaatctagatagatata 83
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 64 atgaat 69
||||||
Sbjct: 98 atgaat 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 126 tagaatgacttacattgtgaaac-ggaggaagta 158
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 131 bits (66), Expect = 2e-30
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| ||||||||||||||||||||||| || ||||||||| ||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 64 atgaatct 71
||||||||
Sbjct: 96 atgaatct 89
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||| |||||||||| ||||||||||
Sbjct: 124 tagaatgacttatattgtgaaac-ggaggaagta 156
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 131 bits (66), Expect = 2e-30
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 121 bits (61), Expect = 2e-27
Identities = 67/69 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 64 atgaatcta 72
|||||||||
Sbjct: 92 atgaatcta 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 9e-30
Identities = 68/69 (98%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 89.7 bits (45), Expect = 7e-18
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 56
|||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatt 57
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgg 105
||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 129 bits (65), Expect = 9e-30
Identities = 68/69 (98%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 64 atgaatcta 72
|||||||||
Sbjct: 89 atgaatcta 81
Score = 121 bits (61), Expect = 2e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 117 tagaatgacttacattgtgaaacgg 141
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 127 bits (64), Expect = 3e-29
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 64 atgaatctatat 75
||||||||||||
Sbjct: 65 atgaatctatat 76
Score = 103 bits (52), Expect = 5e-22
Identities = 52/52 (100%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 127 bits (64), Expect = 3e-29
Identities = 70/72 (97%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtt 82
Query: 63 aatgaatctata 74
||||||||||||
Sbjct: 81 aatgaatctata 70
Score = 101 bits (51), Expect = 2e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtt 63
Query: 63 aat 65
|||
Sbjct: 64 aat 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 125 bits (63), Expect = 1e-28
Identities = 69/71 (97%)
Strand = Plus / Minus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 141 agtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgt 82
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 81 taatgaatcta 71
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 53
|||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 54
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 107 tagaatgacttacattgtgaaacgg 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 37 tagaatgacttacattatgaaac-ggaggaagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 1e-28
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 64 atgaatctatataaatata 82
||||||||| ||| |||||
Sbjct: 65 atgaatctagatagatata 83
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||| ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 125 bits (63), Expect = 1e-28
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgt 62
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 53
|||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 90
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 107 tagaatgacttacattatgaaac-ggaggaagta 139
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 125 bits (63), Expect = 1e-28
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgt 62
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 64 atgaatcta 72
|||||||||
Sbjct: 80 atgaatcta 72
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 108 tagaatgacttacattatgaaac-ggaggaagta 140
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 123 bits (62), Expect = 5e-28
Identities = 68/70 (97%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 133 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 74
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 73 aatgaatcta 64
Score = 103 bits (52), Expect = 5e-22
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 123 bits (62), Expect = 5e-28
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagt 29
||||||||||||||||||||||||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 123 bits (62), Expect = 5e-28
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4 gtactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 141 gtacttcctccgtttcacaatgtaagtcattctagcattttgtacatacatattgatg 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 108 tagaatgacttacattgtgaaac-ggaggaagta 140
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 123 bits (62), Expect = 5e-28
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 4 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 103 bits (52), Expect = 5e-22
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 123 bits (62), Expect = 5e-28
Identities = 68/70 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 64 atgaatctat 73
||||||||||
Sbjct: 70 atgaatctat 61
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||| |||||||||| ||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 64 at 65
||
Sbjct: 61 at 62
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaac 103
|||||||||||||||||||||||
Sbjct: 98 tagaatgacttacattgtgaaac 120
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 123 bits (62), Expect = 5e-28
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 agtactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 91
Query: 62 taatgaatctatat 75
|||||||| |||||
Sbjct: 90 taatgaatatatat 77
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacggg 106
||||||||||||||||||||||||||
Sbjct: 116 tagaatgacttacattgtgaaacggg 141
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 123 bits (62), Expect = 5e-28
Identities = 68/70 (97%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 157 gtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtt 98
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 97 aatgaatcta 88
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||| ||||||||||||||||||||||||| | ||||||||||||||| ||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||| ||| ||||||||||
Sbjct: 37 tagaatgacttacattgtggaac-ggaggaagta 5
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 123 bits (62), Expect = 5e-28
Identities = 74/78 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 64 atgaatctatataaatat 81
||||||||| ||| ||||
Sbjct: 76 atgaatctagatagatat 59
Score = 97.6 bits (49), Expect = 3e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 104 tagaatgacttacattgtgaaacgg 128
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 121 bits (61), Expect = 2e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 103 bits (52), Expect = 5e-22
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcat-tctagcatttcccacattcatattgatgct 62
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 84
Query: 63 aatg 66
||||
Sbjct: 83 aatg 80
Score = 48.1 bits (24), Expect = 3e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgggaggaagtaa 115
|||||||||||||||||||| |||||||||||
Sbjct: 34 aatgacttacattgtgaaac-ggaggaagtaa 4
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 121 bits (61), Expect = 2e-27
Identities = 67/69 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 64 atgaatcta 72
|||||||||
Sbjct: 83 atgaatcta 75
Score = 103 bits (52), Expect = 5e-22
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcat-tctagcatttcccacattcatattgatgct 62
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 64
Query: 63 aatg 66
||||
Sbjct: 65 aatg 68
Score = 48.1 bits (24), Expect = 3e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 84 aatgacttacattgtgaaacgggaggaagtaa 115
|||||||||||||||||||| |||||||||||
Sbjct: 114 aatgacttacattgtgaaac-ggaggaagtaa 144
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 121 bits (61), Expect = 2e-27
Identities = 67/69 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 99.6 bits (50), Expect = 8e-21
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||||||||||||| |||||||||||||| |||||||||||| ||||||
Sbjct: 4 gtacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgct 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||| ||||||||||||| ||||||||||
Sbjct: 37 tagaatgacatacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 121 bits (61), Expect = 2e-27
Identities = 67/69 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 64 atgaatcta 72
|||||||||
Sbjct: 102 atgaatcta 94
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcata 54
||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcata 55
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 130 tagaatgacttacattgtgaaacgg 154
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 121 bits (61), Expect = 2e-27
Identities = 76/81 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 64 atgaatctatataaatataga 84
||||||||| ||| |||||||
Sbjct: 98 atgaatctaaatatatataga 78
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||||| ||||||||||| || |||||| ||||||||||| |||| |
Sbjct: 4 gtactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 121 bits (61), Expect = 2e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 50
|||| ||||||||||| |||| ||||||||||| |||||||||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatt 88
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 2e-27
Identities = 67/69 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 111 bits (56), Expect = 2e-24
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatact 63
Query: 63 aatgaatctatataaatata 82
|||||||||| ||| |||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||| |||||||||| ||||||||||
Sbjct: 37 tagaatgacttatattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 2e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 109 bits (55), Expect = 8e-24
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 64 atgaatctatataaatata 82
||||||||| ||| |||||
Sbjct: 98 atgaatctaaatagatata 80
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 119 bits (60), Expect = 8e-27
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtt 82
Query: 63 aatgaatctata 74
||||||||||||
Sbjct: 81 aatgaatctata 70
Score = 101 bits (51), Expect = 2e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtt 63
Query: 63 aat 65
|||
Sbjct: 64 aat 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 8e-27
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 159 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 100
Query: 63 aatgaatctatataaatata 82
|||||||||| ||| |||||
Sbjct: 99 aatgaatctagatatatata 80
Score = 93.7 bits (47), Expect = 5e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| |||||||||||| | ||| ||||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 64 atgaatctatataaatata 82
||||||||| |||||||||
Sbjct: 65 atgaatctagataaatata 83
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||| |||||||||| ||||||||||
Sbjct: 37 tagaatgacttatattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 119 bits (60), Expect = 8e-27
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 64 atgaatct 71
||||||||
Sbjct: 65 atgaatct 72
Score = 109 bits (55), Expect = 8e-24
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 138 gtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtt 79
Query: 63 aat 65
|||
Sbjct: 78 aat 76
Score = 54.0 bits (27), Expect = 4e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagtaa 115
||||||||||||||||||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagtaa 4
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 8e-27
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtt 63
Query: 63 aatgaatctatataaatata 82
|||||||||| ||| |||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 119 bits (60), Expect = 8e-27
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2 aagtactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgata 61
Query: 61 ctaatgaatcta 72
|||||||||||
Sbjct: 62 ttaatgaatcta 73
Score = 97.6 bits (49), Expect = 3e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatg 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 110 tagaatgacttacattgtgaaac-ggaggaagta 142
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 117 bits (59), Expect = 3e-26
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatc 70
|||||||
Sbjct: 65 atgaatc 71
Score = 111 bits (56), Expect = 2e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |
Sbjct: 142 gtactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtt 83
Query: 63 aatgaatc 70
||||||||
Sbjct: 82 aatgaatc 75
Score = 54.0 bits (27), Expect = 4e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagtaa 115
||||||||||||||||||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagtaa 4
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 117 bits (59), Expect = 3e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 64 atgaatctatataaatata 82
||||||||| ||| |||||
Sbjct: 98 atgaatctagatagatata 80
Score = 99.6 bits (50), Expect = 8e-21
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| ||||||||||||||||||||||||| | |||||||||||||| ||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 3e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatat 62
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 87.7 bits (44), Expect = 3e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
|||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatat 107
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 80 atagaatgacttacattgtgaaacgg 105
||||||||||||||||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacgg 13
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 126 tagaatgacttacattgtgaaac-ggaggaagta 158
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 3e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatat 62
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 64 atgaatctatataaatata 82
||||||||| ||| |||||
Sbjct: 98 atgaatctagatagatata 80
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 115 bits (58), Expect = 1e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 64 atgaatctatataa 77
||||||||| ||||
Sbjct: 63 atgaatctagataa 50
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 1e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 64 atgaat 69
||||||
Sbjct: 98 atgaat 93
Score = 101 bits (51), Expect = 2e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||| ||||| | | |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 64 atgaatctata 74
|||||||||||
Sbjct: 65 atgaatctata 75
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 115 bits (58), Expect = 1e-25
Identities = 91/102 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 64 atgaatctatataaatatagaatgacttacattgtgaaacgg 105
|||||| | || |||||||||||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 101 bits (51), Expect = 2e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 53
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 115 bits (58), Expect = 1e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 64 atgaatctatataa 77
||||||||| ||||
Sbjct: 75 atgaatctagataa 62
Score = 89.7 bits (45), Expect = 7e-18
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatg 61
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 64 atgaatcta 72
|||||||||
Sbjct: 85 atgaatcta 77
Score = 87.7 bits (44), Expect = 3e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 9 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaa 68
||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||| ||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 69 tcta 72
||||
Sbjct: 70 tcta 73
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 113 tagaatgacttacattgtgaaacgg 137
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||| ||||| |||||||| | ||||| ||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 64 atgaat 69
||||||
Sbjct: 86 atgaat 81
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 103 bits (52), Expect = 5e-22
Identities = 73/79 (92%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 99
Query: 64 atgaatctatataaatata 82
|| |||||||||| |||||
Sbjct: 98 ataaatctatatagatata 80
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 124 tagaatgacttacattgtgaaacgg 148
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 83 gaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 aatgacttacattgtgaaacgg 105
||||||||||||||||||||||
Sbjct: 129 aatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 113 bits (57), Expect = 5e-25
Identities = 63/65 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 64 atgaa 68
|||||
Sbjct: 86 atgaa 82
Score = 107 bits (54), Expect = 3e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 64 atgaatctat 73
||||||||||
Sbjct: 65 atgaatctat 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaac 103
|||||||||||||||||||||||
Sbjct: 114 tagaatgacttacattgtgaaac 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 37 tagaatgacttacattatgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 105 bits (53), Expect = 1e-22
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatg 79
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 64 atgaatcta 72
||| |||||
Sbjct: 65 atgtatcta 73
Score = 111 bits (56), Expect = 2e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 64 atgaatctatat 75
||| ||||||||
Sbjct: 86 atgtatctatat 75
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||| ||| ||||||||||
Sbjct: 114 tagaatgacttacattgtggaac-ggaggaagta 146
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 64 atgaatcta 72
|||||||||
Sbjct: 76 atgaatcta 68
Score = 79.8 bits (40), Expect = 7e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||||||||| ||||||| ||||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatgcta 64
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 95.6 bits (48), Expect = 1e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| |
Sbjct: 159 gtactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatt 100
Query: 63 aatgaatctatataaatata 82
|||||||||| ||| |||||
Sbjct: 99 aatgaatctaaatagatata 80
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcattt 42
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 144 gtactctctccgtttcacaatgtaagtcattctagcattt 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 111 tagaatgacttacattgtgaaacgg 135
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 99.6 bits (50), Expect = 8e-21
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| ||||||||||||||||||||||||||||||||| |||| |||||||| |||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 64 atgaatcta 72
|||||||||
Sbjct: 96 atgaatcta 88
Score = 103 bits (52), Expect = 5e-22
Identities = 73/79 (92%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 62
Query: 64 atgaatctatataaatata 82
|| |||||||||| |||||
Sbjct: 63 ataaatctatatagatata 81
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 gaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||
Sbjct: 126 gaatgacttacattgtgaaacgg 148
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 113 bits (57), Expect = 5e-25
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 2 aagtacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctg 61
Query: 61 ctaatgaatctatataaatat 81
|||||||| |||||| ||||
Sbjct: 62 ttaatgaatatatatatatat 82
Score = 87.7 bits (44), Expect = 3e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 64 atgaatcta 72
|||||||||
Sbjct: 92 atgaatcta 84
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 54.0 bits (27), Expect = 4e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 80 atagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||||||||||| ||||||||||
Sbjct: 38 atagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 5e-25
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 64 atgaatctatataaatataga 84
||||||||| ||| |||||||
Sbjct: 65 atgaatctagatagatataga 85
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||| | || |||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 64 atgaat 69
||||||
Sbjct: 98 atgaat 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagtaa 115
||||||||||||||||||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagtaa 4
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||| ||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 64 atgaatctatataaatata 82
||||||||| ||| |||||
Sbjct: 98 atgaatctagatagatata 80
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgg 105
||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 5e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 111 bits (56), Expect = 2e-24
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtt 63
Query: 63 aatgaatctatataaatata 82
|||||||||| ||| |||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 111 bits (56), Expect = 2e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 64 atgaatct 71
||||||||
Sbjct: 75 atgaatct 68
Score = 103 bits (52), Expect = 5e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 64 atga 67
||||
Sbjct: 65 atga 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagtaa 115
|||||||||||| |||||||||| |||||||||||
Sbjct: 103 tagaatgacttatattgtgaaac-ggaggaagtaa 136
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 111 bits (56), Expect = 2e-24
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||| |
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtt 63
Query: 63 aatgaatctatataaatata 82
|||||||||||||| |||||
Sbjct: 64 aatgaatctatatagatata 83
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcat 32
|||||||||||||||||||||||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||| |
Sbjct: 4 gtactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtt 63
Query: 63 aatgaatctatataaatata 82
|||||||||| ||| |||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| | | |||||| ||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggagga 110
||||||||||||||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaagga 8
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa
Japonica Group
Length = 148
Score = 111 bits (56), Expect = 2e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgt 62
Query: 62 taatgaat 69
| ||||||
Sbjct: 63 tcatgaat 70
Score = 105 bits (53), Expect = 1e-22
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 112 tagaatgacttacattgtgaaac-ggaggaagta 144
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 111 bits (56), Expect = 2e-24
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 64 atgaatctatataaatatag 83
||||||||| ||| ||||||
Sbjct: 65 atgaatctagatagatatag 84
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||||||||| | |||||||||||||||||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 64 atgaatcta 72
||| |||||
Sbjct: 95 atggatcta 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagtaa 115
|||||||||||| |||||||||| |||||||||||
Sbjct: 37 tagaatgacttatattgtgaaac-ggaggaagtaa 4
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 111 bits (56), Expect = 2e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct: 2 aagtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatg 61
Query: 61 ctaatgaatcta 72
|||||||||||
Sbjct: 62 ttaatgaatcta 73
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| |||||||||||| |||||| ||||||||||||||| ||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtta 79
Query: 64 at 65
||
Sbjct: 78 at 77
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||| |||||||||| ||||||||||
Sbjct: 106 tagaatgacttatattgtgaaac-ggaggaagta 138
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 109 bits (55), Expect = 8e-24
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatgct 63
Score = 73.8 bits (37), Expect = 4e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccaca 48
|||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 109 bits (55), Expect = 8e-24
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2 aagtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatg 61
Query: 61 ctaatga 67
||||||
Sbjct: 62 ttaatga 68
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||||||||| | ||| |||||||| |||||||||||||||||
Sbjct: 129 gtactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatg 72
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgg 105
||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 109 bits (55), Expect = 8e-24
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 64 atgaatc 70
|||||||
Sbjct: 74 atgaatc 68
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||| ||||||||||||||||||||||| | |||||| |||||||||||||||||
Sbjct: 3 agtactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgatg 61
Score = 46.1 bits (23), Expect = 1e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 84 aatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||||||| ||||||||||
Sbjct: 105 aatgacttacattgtgaaac-ggaggaagta 134
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 109 bits (55), Expect = 8e-24
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
|||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 129 agtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgt 70
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 69 taatgaatcta 59
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttc 43
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2 aagtacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||| |||||||||| ||||||||||
Sbjct: 95 tagaatgacttatattgtgaaac-ggaggaagta 127
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 107 bits (54), Expect = 3e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 64 atgaatctat 73
||||||||||
Sbjct: 65 atgaatctat 74
Score = 107 bits (54), Expect = 3e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 64 atgaatctat 73
||||| ||||
Sbjct: 89 atgaaactat 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaac 103
|||||||||||||||||||||||
Sbjct: 117 tagaatgacttacattgtgaaac 139
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 37 tagaatgacttacattatgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 107 bits (54), Expect = 3e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 70
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 64 atgaatcta 72
|||||||||
Sbjct: 86 atgaatcta 78
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 114 tagaatgacttacattgtgaaacgg 138
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 3e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 7 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatg 66
||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 67 aatcta 72
||||||
Sbjct: 95 aatcta 90
Score = 89.7 bits (45), Expect = 7e-18
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 7 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 58
|||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattga 59
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 107 bits (54), Expect = 3e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 70
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||| |||||||| ||| ||| |||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 64 atgaatcta 72
|||||||||
Sbjct: 86 atgaatcta 78
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 aatgacttacattgtgaaacgg 105
||||||||||||||||||||||
Sbjct: 117 aatgacttacattgtgaaacgg 138
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 107 bits (54), Expect = 3e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 64 atgaatctatataaatat 81
|| ||| || ||||||||
Sbjct: 65 ataaatttagataaatat 82
Score = 95.6 bits (48), Expect = 1e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 107 bits (54), Expect = 3e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 64 atgaat 69
||||||
Sbjct: 86 atgaat 81
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||||||| |||| || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 107 bits (54), Expect = 3e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 89.7 bits (45), Expect = 7e-18
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcata 54
|||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 147 agtacttcctccgttttacaatgtaagtcattctagcatttcccacattcata 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||||| |||| ||||||||||
Sbjct: 113 tagaatgacttacattgtaaaac-ggaggaagta 145
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 107 bits (54), Expect = 3e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtt 89
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 88 aatgaatcta 79
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||| |||||||||||||||||||| ||| |||| |||||| ||||||||| |
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgtt 63
Query: 63 aat 65
|||
Sbjct: 64 aat 66
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 aatgacttacattgtgaaacgg 105
||||||||||||||||||||||
Sbjct: 118 aatgacttacattgtgaaacgg 139
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 107 bits (54), Expect = 3e-23
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatg 61
Score = 103 bits (52), Expect = 5e-22
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 64 atga 67
||||
Sbjct: 70 atga 67
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 64 atgaatcta 72
||| |||||
Sbjct: 69 atggatcta 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagt 29
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 97 tagaatgacttacattatgaaac-ggaggaagta 129
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattt 43
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 105 bits (53), Expect = 1e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 64 atgaatctatata 76
|||||| ||||||
Sbjct: 66 atgaatatatata 54
Score = 97.6 bits (49), Expect = 3e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 83.8 bits (42), Expect = 5e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||| |||||| |||||||||||||||||| | | ||||||||||||| |
Sbjct: 147 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 88
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 87 aatgaatcta 78
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| |||||||||||||||||| | | ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 64 atgaatctatataaatata 82
|||| |||| ||| |||||
Sbjct: 65 atgactctagatagatata 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 85.7 bits (43), Expect = 1e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||||||||||| ||| ||||| |||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 64 atgaatctatataaatata 82
||||||||| ||| |||||
Sbjct: 98 atgaatctagatagatata 80
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 64 atgaatcta 72
|||||||||
Sbjct: 97 atgaatcta 89
Score = 85.7 bits (43), Expect = 1e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 64 atgaatctatataaatata 82
||||||||| ||| |||||
Sbjct: 64 atgaatctagatagatata 82
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 125 tagaatgacttacattgtgaaacgg 149
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 64 atgaatcta 72
|||||||||
Sbjct: 92 atgaatcta 84
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| ||||||||||||||||||||||||| ||||||||| |||||| | |||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgct 63
Query: 63 aatgaat 69
|||||||
Sbjct: 64 aatgaat 70
Score = 46.1 bits (23), Expect = 1e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 64 atgaatcta 72
|||||||||
Sbjct: 71 atgaatcta 63
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 7 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||||||||||||| |||||||||||| |||||| || ||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 80 atagaatgacttacattgtgaaacgg 105
||||||||||||||||||||||||||
Sbjct: 98 atagaatgacttacattgtgaaacgg 123
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 1e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| ||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 64 atgaatctatata 76
|| ||||||||||
Sbjct: 79 ataaatctatata 67
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
||||||||||| ||||||||||||||||||| |||||||| |||| | ||||||||
Sbjct: 4 gtactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 107 tagaatgacttacattgtgaaacgg 131
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| |||||||||||| | || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 89.7 bits (45), Expect = 7e-18
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||| |||||| || |||||||||||||||| |||||||||||||||||| | || ||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 64 atgaatctatataaatataga 84
||||||||| ||| |||||||
Sbjct: 65 atgaatctagatatatataga 85
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 64 atgaatcta 72
|||||||||
Sbjct: 86 atgaatcta 78
Score = 83.8 bits (42), Expect = 5e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||| |||||| |||||||||||||||||| | | ||||||||||||| |
Sbjct: 4 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 64 atgaatcta 72
|||||||||
Sbjct: 70 atgaatcta 62
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||| ||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 98 tagaatgacttacattgtgaaac-ggaggaagta 130
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 105 bits (53), Expect = 1e-22
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 64 atgaatcta 72
|||||||||
Sbjct: 72 atgaatcta 64
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||| |||||||||| ||||||||||
Sbjct: 100 tagaatgacttatattgtgaaac-ggaggaagta 132
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| ||||||||||||||||| |||| ||||| ||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 64 atgaatctatataaatata 82
||||||||| |||||||||
Sbjct: 98 atgaatctagataaatata 80
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 99.6 bits (50), Expect = 8e-21
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||| ||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 64 atgaatctatataaatat 81
||||||||| ||| ||||
Sbjct: 97 atgaatctagatatatat 80
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 125 tagaatgacttacattgtgaaacgg 149
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||| ||||| ||||||||||
Sbjct: 37 tagaatgacttacattgcgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||| ||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 64 atgaatcta 72
|||||||||
Sbjct: 89 atgaatcta 81
Score = 67.9 bits (34), Expect = 3e-11
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacatt 50
||||||| |||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 2 aagtacttcctctgtttcacaatgtaagtc-ttctagcatttcccacatt 50
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 105 bits (53), Expect = 1e-22
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaa 68
|||||
Sbjct: 65 atgaa 69
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattct 35
|||||||| |||||||||||| ||||||||||
Sbjct: 100 tactcccttcgtttcacaatgcaagtcattct 69
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||| ||||||||||| ||||||||||
Sbjct: 37 tagaatgacttgcattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 97.6 bits (49), Expect = 3e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatg 76
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 64 atgaatcta 72
|||||||||
Sbjct: 75 atgaatcta 67
Score = 97.6 bits (49), Expect = 3e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 56
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 103 tagaatgacttacattgtgaaac-ggaggaagta 135
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 103 bits (52), Expect = 5e-22
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| ||||||||||||||||||||||||| |||||||||||||||||||||| || |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtt 63
Query: 63 aatgaatctatataaatata 82
|||||||||| ||| |||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacgg 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 103 bits (52), Expect = 5e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 64 atga 67
||||
Sbjct: 65 atga 68
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 153 gtacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 96
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 120 tagaatgacttacattgtgaaac-ggaggaagta 152
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 103 bits (52), Expect = 5e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| |
Sbjct: 157 gtactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtt 98
Query: 63 aatgaatctatataaatata 82
|||||||||| ||| |||||
Sbjct: 97 aatgaatctagatatatata 78
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| ||||||||||| |||||||||||||||||| | ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 124 tagaatgacttacattgtgaaacgg 148
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 5e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||
Sbjct: 2 aagtactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatg 61
Query: 61 ctaatgaatcta 72
|||||||||||
Sbjct: 62 ttaatgaatcta 73
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| ||||||||||||||||||||| ||||||| |||| |||| ||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 64 atgaat 69
||||||
Sbjct: 98 atgaat 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagtaa 115
|||||||||||||||| |||||| |||||||||||
Sbjct: 126 tagaatgacttacattatgaaac-ggaggaagtaa 159
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa
Japonica Group
Length = 156
Score = 103 bits (52), Expect = 5e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2 aagtacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
Score = 103 bits (52), Expect = 5e-22
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 64 atga 67
||||
Sbjct: 92 atga 89
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 120 tagaatgacttacattgtgaaacgg 144
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 103 bits (52), Expect = 5e-22
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 79.8 bits (40), Expect = 7e-15
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 15 tttcacaatgtaagtcattctagcatttcccacattcatattga 58
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
|||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||
Sbjct: 160 agtactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatgg 101
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 100 taatgaatcta 90
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||||||||||||| || |||| || ||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 37 tagaatgacttacattatgaaac-ggaggaagta 5
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 64 atgaatctatataaatata 82
||||||||| ||| |||||
Sbjct: 65 atgaatctagatagatata 83
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| |||| ||||||||||||| |||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 99.6 bits (50), Expect = 8e-21
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 7 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 7 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatg 66
||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 67 aatcta 72
||||||
Sbjct: 75 aatcta 70
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 106 tagaatgacttacattgtgaaacgg 130
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 99.6 bits (50), Expect = 8e-21
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatg 61
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||||||||||||||||||||||| || ||| ||||||||| ||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 85 ataaatcta 77
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 113 tagaatgacttacattgtgaaacgg 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 99.6 bits (50), Expect = 8e-21
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||| ||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 64 atgaatctatataaatat 81
||||||||| ||| ||||
Sbjct: 70 atgaatctagatatatat 53
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||||||||||||||||| |||||| | ||||||||| || ||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 99.6 bits (50), Expect = 8e-21
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 64 atgaatctatataaatat 81
|| ||| || ||||||||
Sbjct: 65 ataaatttagataaatat 82
Score = 95.6 bits (48), Expect = 1e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||| |||||||||| ||||||||||
Sbjct: 104 tagaatgacttatattgtgaaac-ggaggaagta 136
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||| |||||||||| |||||||||||||||||||||| ||| |||||||||||||
Sbjct: 129 tactctctccgtttcataatgtaagtcattctagcattttccatattcatattgatg 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 99.6 bits (50), Expect = 8e-21
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 64 atgaatctatataaatat 81
||||||||| | ||||||
Sbjct: 65 atgaatctagacaaatat 82
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 56
|||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 37 tagaatgacttacattatgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||||||||| |||||||||| |||||||||||||||| ||||||||| |
Sbjct: 159 gtacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtt 100
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||| |
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 99.6 bits (50), Expect = 8e-21
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||| |||
Sbjct: 137 aagtacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatg 78
Query: 61 ctaatgaatctatataaatata 82
||||||||||| || ||||||
Sbjct: 77 ttaatgaatctagatgaatata 56
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
|||||||||||||||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||| ||||||||||||||||| ||||||||||
Sbjct: 102 tagaaggacttacattgtgaaac-ggaggaagta 134
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||||||||||||| ||||||||| || ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatgcta 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 97.6 bits (49), Expect = 3e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 58
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattctagcatt 41
||||||||||||| |||||||||||||||||
Sbjct: 97 tccgtttcacaatataagtcattctagcatt 67
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 97.6 bits (49), Expect = 3e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatg 82
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||| |||||| ||| |||||||||||||||||| ||||||||||| ||||||||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| ||||||||||||||||||||||| || |||||||||||| ||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 64 atgaatcta 72
|||||||||
Sbjct: 66 atgaatcta 58
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 56
|||| ||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| ||||||||||||||||||||| |||| |||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| ||||||||||||||||||||| ||||||| ||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 37 tagaatgacttacattatgaaac-ggaggaagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||| |||||| |||||||||||| |||||| || ||||||||||||||||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 77.8 bits (39), Expect = 3e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||| |||| | ||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 64 atgaatctatataaatata 82
|||||| || ||| |||||
Sbjct: 65 atgaatttagatagatata 83
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| | ||||| |||| ||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| ||||||||||| |||||||| | || ||||||| ||||||||||||| ||||||
Sbjct: 4 gtacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgct 63
Query: 63 aatgaatctatata 76
||| ||||||||||
Sbjct: 64 aataaatctatata 77
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 97.6 bits (49), Expect = 3e-20
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 95.6 bits (48), Expect = 1e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| | |||||||||| ||| ||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 64 atgaatctatata 76
|||||||||||||
Sbjct: 98 atgaatctatata 86
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||| | |||||||||| |||||||||| || |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 97.6 bits (49), Expect = 3e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||| |||||| ||||||||||||| || ||||| |||||| |||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 97.6 bits (49), Expect = 3e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 64 atgaa 68
|||||
Sbjct: 65 atgaa 69
Score = 97.6 bits (49), Expect = 3e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 64 atgaa 68
|||||
Sbjct: 91 atgaa 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 119 tagaatgacttacattgtgaaac-ggaggaagta 151
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 80 atagaatgacttacattgtgaaacgg 105
||||||||||||| ||||||||||||
Sbjct: 38 atagaatgacttatattgtgaaacgg 13
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 97.6 bits (49), Expect = 3e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatg 61
Score = 89.7 bits (45), Expect = 7e-18
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 75
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 97.6 bits (49), Expect = 3e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||| ||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 64 atgaa 68
|||||
Sbjct: 61 atgaa 57
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 56
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 97.6 bits (49), Expect = 3e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcat 40
|||||||||||||||||||||||||||| ||||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctagcat 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 95.6 bits (48), Expect = 1e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 79.8 bits (40), Expect = 7e-15
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| ||||||||||||| ||||| || ||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 64 atga 67
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 95.6 bits (48), Expect = 1e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 93.7 bits (47), Expect = 5e-19
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcat-tctagcatttcccacattcatattgatgct 62
||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 63 aatgaatctatataaatat 81
|||||||||| ||| ||||
Sbjct: 65 aatgaatctagatagatat 83
Score = 54.0 bits (27), Expect = 4e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagtaa 115
||||||||||||||||||||||| |||||||||||
Sbjct: 105 tagaatgacttacattgtgaaac-ggaggaagtaa 138
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 95.6 bits (48), Expect = 1e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 95.6 bits (48), Expect = 1e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 5 actccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 65 tgaatcta 72
||||||||
Sbjct: 97 tgaatcta 90
Score = 93.7 bits (47), Expect = 5e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||||||||||||||||||| | |||||||| || | ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 64 atgaatctatataaatata 82
|||||||||||| |||||
Sbjct: 65 gtgaatctatatagatata 83
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 95.6 bits (48), Expect = 1e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||| |||||| ||||||||||||||||| |||||||||||||||| ||||| |
Sbjct: 145 gtactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtt 86
Query: 63 aatgaatctatataaatata 82
||| |||||| ||| |||||
Sbjct: 85 aataaatctagatatatata 66
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 64 at 65
||
Sbjct: 65 at 66
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagtaa 115
|||||||||||||||| |||||| |||||||||||
Sbjct: 37 tagaatgacttacattatgaaac-ggaggaagtaa 4
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| |||||||||||||||||||||||||||| |||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 64 atgaatct 71
||||||||
Sbjct: 75 atgaatct 68
Score = 87.7 bits (44), Expect = 3e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgat 60
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||| |||||||||| ||||||||||
Sbjct: 103 tagaatgacttatattgtgaaac-ggaggaagta 135
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 95.6 bits (48), Expect = 1e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 93.7 bits (47), Expect = 5e-19
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 50
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 79.8 bits (40), Expect = 7e-15
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 12 ccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 117 tagaatgacttacattgtgaaacgg 141
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 95.6 bits (48), Expect = 1e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||| |||||||| | |||||||||| ||||||||||||| |||| |
Sbjct: 141 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 82
Query: 63 aatgaatctata 74
||||||||||||
Sbjct: 81 aatgaatctata 70
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 1e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
|||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 83.8 bits (42), Expect = 5e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||| ||||||| ||||| |||||||||||||||| ||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 64 atgaatctatataaatat 81
||||||||| ||| ||||
Sbjct: 70 atgaatctagatagatat 53
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 93.7 bits (47), Expect = 5e-19
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacat 49
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||||||||||||||||||||||| |||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 93.7 bits (47), Expect = 5e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
|||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| ||||
Sbjct: 3 agtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgt 62
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcatt 85
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 93.7 bits (47), Expect = 5e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
|||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| ||||
Sbjct: 3 agtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgt 62
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 50.1 bits (25), Expect = 6e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||| | || ||||||| | | |||||| | |||| ||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 64 atgaatcta 72
|||||||||
Sbjct: 96 atgaatcta 88
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 64 atgaatc 70
|||||||
Sbjct: 65 atgaatc 71
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||| |||| |||||||| |||||||| ||||||||||| |||| |
Sbjct: 157 gtactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtt 98
Query: 63 aatgaatctat 73
|||||||||||
Sbjct: 97 aatgaatctat 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 93.7 bits (47), Expect = 5e-19
Identities = 91/103 (88%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgtt 62
Query: 63 aatgaatctatataaatatagaatgacttacattgtgaaacgg 105
||||||| | | || |||||||||||||||||||||||||
Sbjct: 63 aatgaatgt-gaaaatgctagaatgacttacattgtgaaacgg 104
Score = 69.9 bits (35), Expect = 7e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 8 ccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||||||||||||||||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattt 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 93.7 bits (47), Expect = 5e-19
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcata 54
|||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 73.8 bits (37), Expect = 4e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttc 43
|||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattctagcatttc 44
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 63 tagaatgacttacattgtgaaac-ggaggaagta 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaac 103
|||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 5e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 58
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 87.7 bits (44), Expect = 3e-17
Identities = 54/56 (96%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 59
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcattt-ccacattcatattgat 59
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||| ||||| ||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||| ||||||||||||| ||| |||| || |||||||||||||
Sbjct: 139 aagtactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 56
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 120 gtacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 91.7 bits (46), Expect = 2e-18
Identities = 84/94 (89%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 13 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatcta 72
|||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaatgt- 47
Query: 73 tataaat-atagaatgacttacattgtgaaacgg 105
| |||| |||||||| ||||||||||||||||
Sbjct: 46 gagaaatgctagaatgagttacattgtgaaacgg 13
Score = 87.7 bits (44), Expect = 3e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 53
|||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| ||||||||| ||| |||| ||||||||||||||||| ||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 64 atgaatctatataaatat 81
||||||||| || |||||
Sbjct: 70 atgaatctacatcaatat 53
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||||||||||||||||| | | |||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatg 61
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| | |||||||||| |||| |||||| | |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||| | |||||||||| ||||||| ||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||| | |||||||||| ||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||| |||||| |||||||| | ||||||| || |||||||| |||| ||| |||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 89.7 bits (45), Expect = 7e-18
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 21 aatgtaagtcattctagcatttcccacattcatattgatgctaatgaat 69
||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaat 49
Score = 87.7 bits (44), Expect = 3e-17
Identities = 47/48 (97%)
Strand = Plus / Minus
Query: 25 taagtcattctagcatttcccacattcatattgatgctaatgaatcta 72
||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatcta 57
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| ||||||||||||||||||||| || | |||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| ||||||||||||||||||| | | ||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 37 tagaatgacttacattatgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| | |||||| ||| ||||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||||||||||||||||||| | |||||| | | |||| |||||||| |||| |
Sbjct: 4 gtactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtt 63
Query: 63 aatgaat 69
|||||||
Sbjct: 64 aatgaat 70
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 89.7 bits (45), Expect = 7e-18
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 26 aagtcattctagcatttcccacattcatattgatgctaatgaatc 70
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 83.8 bits (42), Expect = 5e-16
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 29 tcattctagcatttcccacattcatattgatgctaatgaatc 70
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 7e-18
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatg 61
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttc 43
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttc 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 94 tagaatgacttacattgtgaaac-ggaggaagta 126
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 89.7 bits (45), Expect = 7e-18
Identities = 88/102 (86%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 64 atgaatctatataaatatagaatgacttacattgtgaaacgg 105
|| ||| |||| | || |||| |||||||||||||||||
Sbjct: 65 ataaatttataca----tacaatggcttacattgtgaaacgg 102
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcatt 33
||||||||||||||||||||||||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
Score = 48.1 bits (24), Expect = 3e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgggaggaagtaa 115
|||||||||||||||||||| |||||||||||
Sbjct: 34 aatgacttacattgtgaaac-ggaggaagtaa 4
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| ||||||||||||||||||||| || | |||||||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| ||||||||||||||||||| | | ||||||||||| |||| ||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 126 tagaatgacttacattatgaaac-ggaggaagta 158
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||| |||||||| |||||||||||| ||||||||||||| ||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 76 ataaatcta 68
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattca 52
||||| ||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||| |||||||||||||||| ||||||||||
Sbjct: 37 tagaataacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| ||||||||||||| ||| ||||||||| ||| ||| |||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 64 atgaatcta 72
|||||||||
Sbjct: 96 atgaatcta 88
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 9 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaa 68
||||||||||| ||| ||||||||||||||||| ||||||||||||| |||| |||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 69 tct 71
|||
Sbjct: 70 tct 72
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 89.7 bits (45), Expect = 7e-18
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 26 aagtcattctagcatttcccacattcatattgatgctaatgaatctatataaatata 82
||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatata 54
Score = 85.7 bits (43), Expect = 1e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 26 aagtcattctagcatttcccacattcatattgatgctaatgaatcta 72
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatcta 47
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 89.7 bits (45), Expect = 7e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| ||| |||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 64 atgaatcta 72
|||||||||
Sbjct: 79 atgaatcta 71
Score = 73.8 bits (37), Expect = 4e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||| |||||||||||||||||||||| |||||| || ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatg 61
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 87.7 bits (44), Expect = 3e-17
Identities = 47/48 (97%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacatt 50
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 117 gtactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattc 51
||||||||||||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 84 tagaatgacttacattgtgaaacgg 108
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 87.7 bits (44), Expect = 3e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||| |||||||| | |||||||||| ||||||| ||||| ||||
Sbjct: 150 aagtactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatg 91
Query: 61 ctaatgaatcta 72
|||||||||||
Sbjct: 90 ttaatgaatcta 79
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||| | |||||||||| | |||||||| | |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 87.7 bits (44), Expect = 3e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| ||||||||||||||| ||||||||||||| ||||| || ||| ||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgat 63
Query: 63 aatgaatctatataaatata 82
|||||||||| ||| |||||
Sbjct: 64 aatgaatctagatagatata 83
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttc 43
||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 129 gtactccctccgtttcataatgtaagtcattgtagcatttc 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||| |||||||||| ||||||||||
Sbjct: 37 tagaatgacttatattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 85.7 bits (43), Expect = 1e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||||||||||||| |||||||| ||| | |||||||||| ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 64 atgaatctatataaatata 82
||||||||| ||| |||||
Sbjct: 70 atgaatctagatagatata 52
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 48.1 bits (24), Expect = 3e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 84 aatgacttacattgtgaaacgggaggaagtaa 115
|||||||||||||||||||| |||||||||||
Sbjct: 101 aatgacttacattgtgaaac-ggaggaagtaa 131
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 53
||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 73.8 bits (37), Expect = 4e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccaca 48
|||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgg 105
||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
|||||||||||||||||| |||||||| | |||||||||| || | |||||||||||||
Sbjct: 3 agtactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgt 62
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||| | |||||||||| |||||||||||| ||| ||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 64 atgaatcta 72
|||||||||
Sbjct: 96 atgaatcta 88
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 85.7 bits (43), Expect = 1e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 26 aagtcattctagcatttcccacattcatattgatgctaatgaatcta 72
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatcta 64
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 26 aagtcattctagcatttcccacattcatattgatgctaatgaatctatataaatata 82
|||||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatata 57
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 64 atg 66
|||
Sbjct: 65 atg 67
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||||| |||||| ||||||||||||||||||||||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctagcatt 64
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 83.8 bits (42), Expect = 5e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||| ||| |||| | |||||||||| |||| |||||||| ||||||
Sbjct: 141 gtactccctccgtttcataatataagactttctagcattacccatattcatatagatgct 82
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 81 aatgaatcta 72
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||| |||||| ||| |||||| |||||||||| | || |||||||| |||| ||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||||||||||||||| ||||||||| || ||| |||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatg 61
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||| ||||||||||||||| ||||||||| ||||||||| || ||| |||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatg 66
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||| | |||||||||| ||||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||| |||||||| | |||||||||| ||||||||||||| ||||
Sbjct: 143 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatg 86
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 83.8 bits (42), Expect = 5e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 49
|||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
Score = 50.1 bits (25), Expect = 6e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||| ||| ||||||| ||| |||||||||||| |||||| |||||| ||||
Sbjct: 4 gtacttccttcgtttcataatataagtcattctaacatttctcacatttatat 56
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 83.8 bits (42), Expect = 5e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||| ||| | ||||||||| ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 64 atgaatctatataaatat 81
||||||||| ||| ||||
Sbjct: 70 atgaatctagatagatat 53
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||||||||||| ||||||||||||||||||| ||||| |||||||||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 54.0 bits (27), Expect = 4e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagtaa 115
||||||||||||||||||||||| |||||||||||
Sbjct: 98 tagaatgacttacattgtgaaac-ggaggaagtaa 131
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||||||||||||||||| ||| || ||||||||| ||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 64 atgaat 69
||||||
Sbjct: 71 atgaat 66
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcattt 42
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 99 tagaatgacttacattgtgaaac-ggaggaagta 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 84 aatgacttacattgtgaaacgg 105
||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||| ||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 77 ataaatcta 69
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| ||||||||| ||||||||||| |||||||||| || |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcattgcccacattcacatagatgcta 64
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatg 61
Score = 69.9 bits (35), Expect = 7e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 58
|||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||| ||||| ||||||||||||||||||||| | ||||||||||| |||| ||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 64 atgaatcta 72
|||||||||
Sbjct: 72 atgaatcta 64
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
|||||||||||||||| ||||||||||||||||||||| || | ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatat 56
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||| ||||||||||||||| | |||||||||| ||||||||||| | |||| ||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||||||||||||||||||||| | || ||||||| | ||||| |||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatat 109
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 56
|||| ||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcatt 33
|||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcatt 34
Score = 48.1 bits (24), Expect = 3e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 84 aatgacttacattgtgaaacgggaggaagtaa 115
|||||||||||||||||||| |||||||||||
Sbjct: 80 aatgacttacattgtgaaac-ggaggaagtaa 110
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| | |||||| ||| |||| |||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||||||||||| ||||||| | |||||| | | |||| |||||||| |||| |
Sbjct: 4 gtactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtt 63
Query: 63 aatgaat 69
|||||||
Sbjct: 64 aatgaat 70
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| | |||||||||| |||||||||||| |||| ||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 80 ataaatcta 72
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||||||||| | || ||||||| ||| |||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatg 61
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||| |||||| ||||||| ||||||||||||| ||||||| ||||| |||| ||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 64 atgaatcta 72
|||||||||
Sbjct: 72 atgaatcta 64
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
|||| ||||||||||| ||||||||||||||||||||| |||| || |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattacccatatgcatat 56
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 37 tagaatgacttacattatgaaac-ggaggaagta 5
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 26 aagtcattctagcatttcccacattcatattgatgctaatgaatctatataaatata 82
||||||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatata 67
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 26 aagtcattctagcatttcccacattcatattgatgctaatgaatcta 72
||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 47
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| ||||||||||||||||||||||| || ||| |||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 64 atgaatcta 72
||||||||
Sbjct: 65 gtgaatcta 73
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattca 52
||||||||| |||||| ||||||||||||| |||||||| ||||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattca 110
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| |||| | |||||||||| ||||||| ||||| |||| ||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 64 atgaatcta 72
|||||||||
Sbjct: 76 atgaatcta 68
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| |||| | |||||||||| ||||||| ||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| | | |||||||| | ||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| | || || |||| |||||||||| || |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 64 atgaatctatataaatat 81
||||||||| ||| ||||
Sbjct: 98 atgaatctagatatatat 81
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||| | |||||||||| ||||||||||||| |||| ||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 74 ataaatcta 66
Score = 50.1 bits (25), Expect = 6e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||||||||||||| | |||||| | |||||||||| |||||||||||
Sbjct: 4 gtactccctccgtttcatattgtaagactttctagcattgttcacattcatat 56
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||| | |||||||||| ||||||||||||| |||| ||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||| |||||||| | || ||||||| | ||||||||||| |||| |
Sbjct: 4 gtactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||| | |||||||||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||| |||||||| | || ||||||| | ||||||||||| |||| |
Sbjct: 159 gtactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtt 100
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||| |||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatg 61
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||| | |||||||||||||||| ||||| |||||||| ||| |||| ||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 64 atgaatcta 72
||||||||
Sbjct: 78 gtgaatcta 70
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||||| |||||| ||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||| | |||||||||| | || |||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 7e-15
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||| |||||| |||||||| | |||||||||| |||||||||||| ||||
Sbjct: 135 aagtactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatg 76
Query: 61 ctaatgaatcta 72
|||||||||||
Sbjct: 75 ttaatgaatcta 64
Score = 50.1 bits (25), Expect = 6e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||| ||||| ||||| |||||||| | |||||||||| |||||||||||| ||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatg 61
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 7e-15
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||||||||||||||| | |||||||||| ||| || ||||| ||||
Sbjct: 161 aagtactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatg 102
Query: 61 ctaatgaatcta 72
|||||||||||
Sbjct: 101 ttaatgaatcta 90
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||| | |||||||||| ||||||||||| | | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 79.8 bits (40), Expect = 7e-15
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 9 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaa 68
||||||||||||||| ||||||||| |||||||| || ||||||||||||| |||||||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 69 tcta 72
||||
Sbjct: 67 tcta 64
Score = 75.8 bits (38), Expect = 1e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 14 gtttcacaatgtaagtcattctagcatttcccacattcatat 55
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatat 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaac 103
|||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||| ||||||||||||| ||||| |||||||| || ||| |||||||| ||
Sbjct: 107 gtactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatact 48
Query: 63 aatgaatctatataa 77
|||||||||| ||||
Sbjct: 47 aatgaatctagataa 33
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcatt 33
|||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaat 69
|||||||||||||||||| | |||||||||| ||||||||||||| ||| |||||||||
Sbjct: 119 tccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaat 61
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcata 54
|||| ||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||||||| ||||||||||||| ||||| | ||| ||||| || ||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 64 atgaatcta 72
|||||||||
Sbjct: 79 atgaatcta 71
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||| |||||||||| ||||||||||
Sbjct: 107 tagaatgacttatattgtgaaac-ggaggaagta 139
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||
Sbjct: 120 tactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatagatgct 62
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||| |||||||||||||||||||| | ||||||| || ||||||||||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagatg 61
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 77.8 bits (39), Expect = 3e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| |||| ||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 64 atgaatctata 74
|||||||||||
Sbjct: 100 atgaatctata 90
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| | | |||| | |||||||||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 64 atgaatctatataaatat 81
||||||||||||| ||||
Sbjct: 65 atgaatctatatatatat 82
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
||||||||||||||||||||||||||| | |||||||||| ||||||| ||| | ||||
Sbjct: 160 agtactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgt 101
Query: 62 taatgaatcta 72
|||| ||||||
Sbjct: 100 taataaatcta 90
Score = 50.1 bits (25), Expect = 6e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||| | || ||| ||| || ||||||| | |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||| |||||||| | |||||||||| ||||||||||||| ||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatg 61
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| ||||||| | || ||||||| ||||||||||||| |||| ||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 64 atgaat 69
||||||
Sbjct: 82 atgaat 77
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 75.8 bits (38), Expect = 1e-13
Identities = 87/102 (85%), Gaps = 6/102 (5%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||| |||||||||||| |||| |||||| ||||||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgat---- 53
Query: 64 atgaatctatataaatatagaatgacttacattgtgaaacgg 105
|| |||| || | ||||||||||||||||||||||||||||
Sbjct: 52 attaatc--tagacatatagaatgacttacattgtgaaacgg 13
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattcta 36
|||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||| ||||||||||| ||||||||||
Sbjct: 76 tagaatgacttgcattgtgaaac-ggaggaagta 108
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 49
|||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagc 38
||||||||||||||||||||||||||||||||||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcattctagc 60
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 62 tagaatgacttacattgtgaaacgg 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||| ||| ||||||||||
Sbjct: 37 tagaatgacttacattgtggaac-ggaggaagta 5
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 7 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatg 66
||||||||||||||||| ||||||||||||||||||| || || |||||||| |||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatg 67
Query: 67 aatcta 72
||||||
Sbjct: 68 aatcta 73
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||| ||||||||||||||| ||||||||| |||||||| ||||||||| ||||||
Sbjct: 138 gtacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatg 81
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||||||||||||||| | | |||| | |||||||||| ||||||||||||| |||| |
Sbjct: 160 gtactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtt 101
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 100 aatgaatcta 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatg 61
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||| | |||||||||| | ||||| ||||| |||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| |||||||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 64 atgaatcta 72
|||||||||
Sbjct: 78 atgaatcta 70
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 56
|||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 56
|||| ||||||||||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| | || ||| ||| |||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
|||||||||||||||||| ||| |||| | |||||| ||| |||| |||||||| ||||
Sbjct: 3 agtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 62
Query: 62 taatgaa 68
|||||||
Sbjct: 63 taatgaa 69
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 10 ctccgtttcacaatgtaagtcattctagcatttcccacatt 50
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcatttcctacatt 43
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctag 37
|||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgg 105
|||||||||||||||||||||||||
Sbjct: 57 tagaatgacttacattgtgaaacgg 81
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||| | |||||||||| |||||||||| | |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| | | |||| | |||||||||| ||||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| | | |||| | |||||||||| |||||| |||||| |||| ||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 64 atgaatctata 74
||||| |||||
Sbjct: 65 atgaacctata 75
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 73.8 bits (37), Expect = 4e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttc 43
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 73.8 bits (37), Expect = 4e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||| ||||||||| ||||| ||||||||||||||||||| |||||| |||||||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatg 37
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcatt 33
||||| |||||||||||||| |||||||||
Sbjct: 5 tactctctccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||| | |||||||||| |||| |||||| | |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| | |||||| ||| ||||| | ||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| | || ||| ||| |||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 2 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 61
|||||||||||||||||| ||| |||| | |||||| ||| |||| |||||||| ||||
Sbjct: 160 agtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 101
Query: 62 taatgaa 68
|||||||
Sbjct: 100 taatgaa 94
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattc 51
|||| ||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
|||||||||||||||||||||||||||| | |||||||||| | || || ||||| || |
Sbjct: 2 aagtactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacg 61
Query: 61 ctaatgaatcta 72
|||||||||||
Sbjct: 62 ttaatgaatcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||| | || ||||||| |||| |||||| | |||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||| ||||||||||| |||| ||| | |||||||||| ||||||||||| | ||||
Sbjct: 2 aagtacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatg 61
Query: 61 ctaatgaatcta 72
|||||||||||
Sbjct: 62 ttaatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
||||||||||||||||||||||||| | ||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacatt 121
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcattt 66
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcattt 42
||||||||||| ||||||||||| ||||||||||||| ||||
Sbjct: 2 aagtactcccttcgtttcacaatataagtcattctagtattt 43
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||| ||||| ||| |||||||||||||||||| ||| ||| |||||||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgatgct 81
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 49
|||||||||||||||| ||||||||||||||||| |||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattttccacat 50
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 7 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatg 66
||||||||||||| |||||||| | |||||||||| |||||||||||| |||| ||| |
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 67 aatcta 72
||||||
Sbjct: 45 aatcta 40
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||||||||||||||||||| |||||||||| ||||||| | || |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| |||||||| | |||||||||| | |||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||| | |||||| || |||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| |||||||||||||||| ||| |||| || ||||| ||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||| ||||||||||| ||||||||||||||||||||| | ||||||||||
Sbjct: 137 gtacttcctccgtttcataatgtaagtcattctagcattgtctacattcatat 85
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 81 tagaatgacttacattgtgaaacgggaggaagta 114
|||||||||||||||| |||||| ||||||||||
Sbjct: 104 tagaatgacttacattatgaaac-ggaggaagta 136
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||| ||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 64 atgaatcta 72
|||||||||
Sbjct: 72 atgaatcta 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
||||||| ||||||||||| | | |||| | |||||| ||| |||||||||||||
Sbjct: 2 aagtacttcctccgtttcatattataagactttctagtattacccacattcatat 56
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
||||||||| |||||| |||||||| | |||||||||| |||||||| ||| |||| ||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 55
|||| ||||| ||||| |||||||| | |||||||||| |||||||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| ||||||||||| | | |||| | |||||||||| ||||||||||||| |||| ||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 64 atgaatcta 72
|||||||||
Sbjct: 66 atgaatcta 58
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 53
||||||||||||||||| | | |||| |||||||||| |||||||||||
Sbjct: 4 gtactccctccgtttcatattataagattttctagcattgcccacattcat 54
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||| ||||| |||||||| | |||||||||| |||||||||||| |||| ||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 65 ataaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcatt 87
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||||||||||||||||||| | || |||| || ||||||||||| | |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 60.0 bits (30), Expect = 7e-09
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||||||||||||||||||| |||| | || ||||| | ||||||| |||| |||| ||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 64 atgaatctatataaatat 81
||||||||| ||| ||||
Sbjct: 94 atgaatctaaatacatat 77
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||| |||| |||||| | | |||| | |||||||||| ||||||||||||| ||||
Sbjct: 135 aagtacttcctcagtttcatattataagactttctagcattgcccacattcatatagatg 76
Query: 61 ctaatgaatcta 72
|||||||||||
Sbjct: 75 ttaatgaatcta 64
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattca 52
|||||||||||||||| | | |||| | |||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattca 53
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 21 aatgtaagtcattctagcatttcccacattcatattgatgctaatgaatcta 72
|||||||| | |||||||||| ||||||||||||| |||||||||||||||
Sbjct: 1 aatgtaagactttctagcattgcccacattcatatctatgctaatgaatcta 52
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 21 aatgtaagtcattctagcatttcccacattcatattgatgctaatgaatcta 72
|||||||| | ||||| |||| ||||||||||||| ||||| ||||||||||
Sbjct: 120 aatgtaagactttctaacattgcccacattcatatagatgcaaatgaatcta 69
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||| |||| |||||| | | |||| | |||||||||| ||||||||||||| ||||
Sbjct: 135 aagtacttcctcagtttcatattataagactttctagcattgcccacattcatatagatg 76
Query: 61 ctaatgaatcta 72
|||||||||||
Sbjct: 75 ttaatgaatcta 64
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattca 52
|||||||||||||||| | | |||| | |||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattca 53
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccac 47
|||||||||||||||| ||| |||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattttccac 48
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttc 43
|||||||| ||||||| |||||||||||||||||||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcatttc 107
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||| |||||| | | |||| | |||||| ||| ||||||||||||| |||| |
Sbjct: 4 gtactccctctgtttcatattataagactttctagaattgcccacattcatatagatgtt 63
Query: 63 aatgaatctata 74
||||||||||||
Sbjct: 64 aatgaatctata 75
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 43 cccacattcatattgatgctaatgaatctata 74
||||||||||||| |||| |||||||||||||
Sbjct: 121 cccacattcatatagatgttaatgaatctata 90
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 38 catttcccacattcatattgatgctaatgaa 68
|||||||||||||||||||||||||||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaa 35
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 38 catttcccacattcatattgatgctaatgaatcta 72
|||||||||||||||||||||||||||| ||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatcta 78
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 34 ctagcatttcccacattcatattgatgctaatgaatcta 72
||||||||||||||||||||||||||| ||||||||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatcta 50
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 38 catttcccacattcatattgatgctaatgaatcta 72
||||||||||||||||||||||| ||||||||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatcta 39
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||||||||||||||| |||| ||||||| | || || ||||| |||| |
Sbjct: 138 gtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtt 79
Query: 63 aatgaat 69
|||||||
Sbjct: 78 aatgaat 72
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatt 41
|||||||||||||||||||||||||| | ||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaaggctttctagcatt 42
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 7 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatg 66
|||||||||||||||||||||| | |||||| ||| ||||||| || | |||| |||||
Sbjct: 115 tccctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatg 56
Query: 67 aatct 71
|||||
Sbjct: 55 aatct 51
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
||||| |||||||||||||||||||| |||| ||||||| | || || ||||| |||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtt 63
Query: 63 aatgaat 69
|||||||
Sbjct: 64 aatgaat 70
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatt 41
||||||||||||||||| |||||||||| ||||||||||
Sbjct: 84 gtactccctccgtttcataatgtaagtctttctagcatt 46
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagc 38
|||| ||||||||||| |||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagc 39
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 30 cattctagcatttcccacattcatattgatgctaatgaatctatataaatataga 84
||||||| |||||||||||||||||| | || ||||||||||| ||| |||||||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatataga 48
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 30 cattctagcatttcccacattcatattgatgctaatgaatcta 72
||||||||||||| |||||||||||| | || |||||||||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatcta 43
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||| ||||||||||||||| | ||||||| || ||||||||||||| ||| ||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatta 55
Query: 64 atgaat 69
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 3 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 62
|||||||||| |||||| |||||||| | || ||||||| ||||||||||||| |||
Sbjct: 159 gtactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatc 100
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 63
|||| |||| |||||| |||||||| | ||||||| || ||||||||||||| ||| ||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 7 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatg 66
||||||||||||| |||||||| | |||||||||| ||| |||||||| |||| ||| |
Sbjct: 8 tccctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacg 67
Query: 67 aatcta 72
||||||
Sbjct: 68 aatcta 73
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1 aagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 60
||||||||||||||||||| |||||||| | |||||||| | |||||||||| ||||
Sbjct: 2 aagtactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatg 61
Query: 61 ctaatgaatctata 74
||||| |||||||
Sbjct: 62 ttaatggatctata 75
