miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;AC160628.37/88700-88815 3880:Medicago truncatula
           (barrel medic)
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 51  acctgccaaaggagatttgccc 72
           ||||||||||||||||||||||
Sbjct: 83  acctgccaaaggagatttgccc 104




>RF00445;mir-399;ABIM01002716.1/17825-17941 3649:Carica papaya
           (papaya)
          Length = 117

 Score = 42.1 bits (21), Expect = 9e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  cctgccaaaggagatttgccc 72
           |||||||||||||||||||||
Sbjct: 85  cctgccaaaggagatttgccc 105




>RF00445;mir-399;ABIM01002717.1/16187-16280 3649:Carica papaya
          (papaya)
          Length = 94

 Score = 42.1 bits (21), Expect = 9e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 52 cctgccaaaggagatttgccc 72
          |||||||||||||||||||||
Sbjct: 62 cctgccaaaggagatttgccc 82