miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 176 bits (89), Expect = 1e-43
Identities = 119/129 (92%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||||||||||| ||| |||
Sbjct: 133 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaaactagaca 74
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 262 gaggaagta 270
|||||||||
Sbjct: 13 gaggaagta 5
Score = 149 bits (75), Expect = 2e-35
Identities = 120/135 (88%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| ||| |||||||||| ||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||| ||| ||||| |||||||||||||||||||||| || |||||||||| |||||||
Sbjct: 86 atgaaactagacatagattcattaacatcaatatgaatgtggaaaatgctagaatgactt 27
Query: 127 acattgtgaaacgga 141
||||| |||||||||
Sbjct: 26 acattatgaaacgga 12
Score = 121 bits (61), Expect = 6e-27
Identities = 106/121 (87%)
Strand = Plus / Plus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatattca 209
||||||||| ||| |||| ||| ||| ||||||||||||||||||||| || ||||
Sbjct: 26 taagtcattctagcattttccacattcatattgatgttaatgaatctatgtctagtttca 85
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagt 269
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||
Sbjct: 86 ttaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaccgagggagt 145
Query: 270 a 270
|
Sbjct: 146 a 146
Score = 107 bits (54), Expect = 8e-23
Identities = 108/126 (85%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| ||||||||| ||| |||| ||||| ||||||||||||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| || ||||||||||||||||||||| || ||||||||| |||||||||||||
Sbjct: 71 ctatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 130
Query: 133 tgaaac 138
||||||
Sbjct: 131 tgaaac 136
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 168 bits (85), Expect = 3e-41
Identities = 118/129 (91%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||| |||||||||||||||| |||||||||||| |
Sbjct: 133 tcacaatgtaagtcattctagcattttccatatttatattgatattaatgaatctacatc 74
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 262 gaggaagta 270
|| ||||||
Sbjct: 13 gaagaagta 5
Score = 151 bits (76), Expect = 6e-36
Identities = 115/128 (89%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaatc 73
||||||||||||| ||||||||| ||| |||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 74 taaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgt 133
|| | || ||||||||| |||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 72 tagatgtagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgt 131
Query: 134 gaaacgga 141
||||||||
Sbjct: 132 gaaacgga 139
Score = 141 bits (71), Expect = 6e-33
Identities = 119/135 (88%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||| | |||||||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||| | || |||||||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 86 atgaatctacatctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 27
Query: 127 acattgtgaaacgga 141
|||||||||||||||
Sbjct: 26 acattgtgaaacgga 12
Score = 137 bits (69), Expect = 9e-32
Identities = 114/129 (88%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| ||||| || ||| ||||||||||||||||||||| |
Sbjct: 18 tcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctagatg 77
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| ||||||||| |||||||| ||| || |||||||||||||||||||||||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 138 gagggagta 146
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 168 bits (85), Expect = 3e-41
Identities = 118/129 (91%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||| |||||||||||||||| |||||||||||| |
Sbjct: 133 tcacaatgtaagtcattatagcattttccatatttatattgatattaatgaatctacatc 74
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 262 gaggaagta 270
|| ||||||
Sbjct: 13 gaagaagta 5
Score = 143 bits (72), Expect = 2e-33
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaatc 73
||||||||||||| ||||||||| ||| |||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 74 taaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgt 133
|| | || ||||||||| |||||||| |||||| ||||||||| ||||||||||||||
Sbjct: 72 tagatgtagattcattaatatcaatataaatatggaaaatgctataatgacttacattgt 131
Query: 134 gaaacgga 141
||||||||
Sbjct: 132 gaaacgga 139
Score = 141 bits (71), Expect = 6e-33
Identities = 119/135 (88%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||| | |||||||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||| | || |||||||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 86 atgaatctacatctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 27
Query: 127 acattgtgaaacgga 141
|||||||||||||||
Sbjct: 26 acattgtgaaacgga 12
Score = 129 bits (65), Expect = 2e-29
Identities = 113/129 (87%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| ||||| || ||| ||||||||||||||||||||| |
Sbjct: 18 tcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctagatg 77
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| ||||||||| |||||||| ||| || ||||||||| |||||||||||||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 138 gagggagta 146
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 159 bits (80), Expect = 3e-38
Identities = 113/123 (91%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||||||||| ||||||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatctagaca 77
Query: 202 tat--attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaa 259
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 78 tatatattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 137
Query: 260 cgg 262
|||
Sbjct: 138 cgg 140
Score = 149 bits (75), Expect = 2e-35
Identities = 117/130 (90%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||||||||| ||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaat 70
Query: 73 ctaaacatat--attcattaacatcaatatgaatatgaaaaatgctagtatgacttacat 130
||| |||||| |||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct: 71 ctagacatatatattcattaacatcaatatgaatgtgggaaatgctagaatgacttacat 130
Query: 131 tgtgaaacgg 140
||||||||||
Sbjct: 131 tgtgaaacgg 140
Score = 127 bits (64), Expect = 9e-29
Identities = 115/131 (87%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||| || |
Sbjct: 135 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatatatatg 76
Query: 202 tata--ttcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaa 259
| || ||||||||||| ||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacattaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 260 cggaggaagta 270
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 101 bits (51), Expect = 5e-21
Identities = 117/138 (84%), Gaps = 2/138 (1%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| | |||||||||||| ||||||||| ||| ||||| ||||| |||||||||||
Sbjct: 149 gtactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 90
Query: 66 aatgaatctaaacatata--ttcattaacatcaatatgaatatgaaaaatgctagtatga 123
||||||| || | | || ||||||||||| ||||| ||| || ||||||||| ||||
Sbjct: 89 aatgaatatatatgtctagattcattaacattaatataaatgtgggaaatgctagaatga 30
Query: 124 cttacattgtgaaacgga 141
||||||||||||||||||
Sbjct: 29 cttacattgtgaaacgga 12
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 155 bits (78), Expect = 4e-37
Identities = 119/132 (90%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||||||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagaca 77
Query: 202 t---atattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaa 258
| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 78 ttctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 137
Query: 259 acggaggaagta 270
||||||| ||||
Sbjct: 138 acggagggagta 149
Score = 147 bits (74), Expect = 1e-34
Identities = 118/132 (89%), Gaps = 3/132 (2%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||||||||||||||| |
Sbjct: 136 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagaat 77
Query: 202 ---tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaa 258
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 76 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 259 acggaggaagta 270
||||||||||||
Sbjct: 16 acggaggaagta 5
Score = 139 bits (70), Expect = 2e-32
Identities = 117/132 (88%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 73 ctaaacat---atattcattaacatcaatatgaatatgaaaaatgctagtatgacttaca 129
||| |||| | |||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 71 ctagacattctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 130
Query: 130 ttgtgaaacgga 141
||||||||||||
Sbjct: 131 ttgtgaaacgga 142
Score = 127 bits (64), Expect = 9e-29
Identities = 120/138 (86%), Gaps = 3/138 (2%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 67 atgaatctaaaca---tatattcattaacatcaatatgaatatgaaaaatgctagtatga 123
||||||||| | || |||||||||||||||||||||| || ||||||||| ||||
Sbjct: 89 atgaatctagaatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 30
Query: 124 cttacattgtgaaacgga 141
||||||||||||||||||
Sbjct: 29 cttacattgtgaaacgga 12
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 153 bits (77), Expect = 2e-36
Identities = 117/129 (90%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| ||||||||| ||| |||||| |||||||||||||||||||| |||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| | || ||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 71 ctagtc-tagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattg 129
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 130 tgaaacgga 138
Score = 151 bits (76), Expect = 6e-36
Identities = 116/128 (90%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||| ||||||| ||||||||||||||||||||| ||
Sbjct: 132 tcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatctagac- 74
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| ||| |||||||||||||| ||||||| |||||||||||||||||||||| |||||||
Sbjct: 73 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 14
Query: 262 gaggaagt 269
||||||||
Sbjct: 13 gaggaagt 6
Score = 141 bits (71), Expect = 6e-33
Identities = 111/123 (90%), Gaps = 1/123 (0%)
Strand = Plus / Plus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatattca 209
||||||||| ||| ||||| || |||||||||||||||||| |||||| | || |||||
Sbjct: 26 taagtcattctagcatttctcacatttatattgatgttaataaatctagtc-tagattca 84
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagt 269
||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 85 ttaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagt 144
Query: 270 aac 272
|||
Sbjct: 145 aac 147
Score = 117 bits (59), Expect = 9e-26
Identities = 117/135 (86%), Gaps = 1/135 (0%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||| | ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||| || || ||| |||||||||||||| ||| ||| ||||||||| |||||||
Sbjct: 85 atgaatctagac-tagatttattaacatcaatataaatgtgagaaatgctagaatgactt 27
Query: 127 acattgtgaaacgga 141
||||| |||||||||
Sbjct: 26 acattatgaaacgga 12
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 151 bits (76), Expect = 6e-36
Identities = 115/128 (89%)
Strand = Plus / Minus
Query: 143 cacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaacat 202
|||||| ||||||||| ||| |||||||| ||| ||||||||||||||| ||||| | |
Sbjct: 132 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatgtatctatatct 73
Query: 203 atattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacgg 262
| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 72 agatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacgg 13
Query: 263 aggaagta 270
||| ||||
Sbjct: 12 agggagta 5
Score = 145 bits (73), Expect = 4e-34
Identities = 115/129 (89%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||| ||| ||| ||||||||||||||| ||||| | |
Sbjct: 18 tcacaatgtaagtcattctagcattttccacattcatattgatgttaatgtatctagata 77
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 262 gaggaagta 270
|||||||||
Sbjct: 138 gaggaagta 146
Score = 129 bits (65), Expect = 2e-29
Identities = 113/129 (87%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
||||||| |||||| ||||||||| ||| ||||| ||||| ||||||||||||||| ||
Sbjct: 140 ctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaatgtat 81
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| | || || ||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct: 80 ctatatctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattg 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 125 bits (63), Expect = 4e-28
Identities = 117/135 (86%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||| ||||| | ||| || ||||||||||||||||||| || ||||||||| |||||||
Sbjct: 65 atgtatctagatatagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 124
Query: 127 acattgtgaaacgga 141
|||||||| ||||||
Sbjct: 125 acattgtggaacgga 139
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 149 bits (75), Expect = 2e-35
Identities = 123/141 (87%), Gaps = 11/141 (7%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||||||
Sbjct: 144 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaaaca 85
Query: 202 tat-----------attcattaacatcaatatgaatgtgaaaaatgctagaatgacttac 250
||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 84 tatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 25
Query: 251 attgtgaaacggaggaagtaa 271
|||||||||||||||||||||
Sbjct: 24 attgtgaaacggaggaagtaa 4
Score = 129 bits (65), Expect = 2e-29
Identities = 125/147 (85%), Gaps = 11/147 (7%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||||||||| ||| ||||| ||||| |||||||||||
Sbjct: 158 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 99
Query: 66 aatgaatctaaacatat-----------attcattaacatcaatatgaatatgaaaaatg 114
||||||||||||||||| |||||||||||||||||||||| || |||||
Sbjct: 98 aatgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| ||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 121 bits (61), Expect = 6e-27
Identities = 120/140 (85%), Gaps = 11/140 (7%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaa--- 198
||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagcac 77
Query: 199 --acatat------attcattaacatcaatatgaatgtgaaaaatgctagaatgacttac 250
|||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 78 atacatatgtttagattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 137
Query: 251 attgtgaaacggaggaagta 270
||||||||||||||| ||||
Sbjct: 138 attgtgaaacggagggagta 157
Score = 105 bits (53), Expect = 3e-22
Identities = 118/140 (84%), Gaps = 11/140 (7%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 73 ctaa-----acatat------attcattaacatcaatatgaatatgaaaaatgctagtat 121
||| |||||| |||||||||||||||||||||| || ||||||||| ||
Sbjct: 71 ctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgctagaat 130
Query: 122 gacttacattgtgaaacgga 141
||||||||||||||||||||
Sbjct: 131 gacttacattgtgaaacgga 150
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 149 bits (75), Expect = 2e-35
Identities = 111/122 (90%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatattca 209
||||||||| |||||||||||| ||| ||| |||||||||| |||||| | |||||| |
Sbjct: 123 taagtcattctagtatttcccacattcatagtgatgttaataaatctagatatatat--a 66
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagt 269
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 65 ttaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaagt 6
Query: 270 aa 271
||
Sbjct: 5 aa 4
Score = 121 bits (61), Expect = 6e-27
Identities = 118/136 (86%), Gaps = 2/136 (1%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| ||| |||||| ||| ||||||||| ||||||||| ||||| ||| |||||||
Sbjct: 145 gtactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtt 86
Query: 66 aatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgact 125
||| |||||| | |||||| |||||||||| ||||||| ||||||||||||| ||||||
Sbjct: 85 aataaatctagatatatat--attaacatcactatgaatgtgaaaaatgctagaatgact 28
Query: 126 tacattgtgaaacgga 141
|||||| |||||||||
Sbjct: 27 tacattatgaaacgga 12
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
|||||||||| |||||||||| |||| ||||||||||||||||| |||||| |||| ||
Sbjct: 83 attaacatcactatgaatgtgggaaatactagaatgacttacattatgaaacagagggag 142
Query: 269 ta 270
||
Sbjct: 143 ta 144
Score = 61.9 bits (31), Expect = 4e-09
Identities = 103/126 (81%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| ||||||||| ||| |||| | ||||| ||| |||||||||| ||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgttaat--at 68
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
|| | || ||| |||||||||| ||||||| || |||| |||| ||||||||||||
Sbjct: 69 atatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttacatta 128
Query: 133 tgaaac 138
||||||
Sbjct: 129 tgaaac 134
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 149 bits (75), Expect = 2e-35
Identities = 117/131 (89%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| |||||||| |||||||||||||||| ||||||||||| |
Sbjct: 18 tcacaatgtaagtcattctagtatttttcatatttatattgatgctaatgaatctagatc 77
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 78 taaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaacg 137
Query: 262 gaggaagtaac 272
|||| ||||||
Sbjct: 138 gagggagtaac 148
Score = 133 bits (67), Expect = 1e-30
Identities = 118/135 (87%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| |||||||| | | ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||| | || |||||||| ||||||||||||| | |||||||||| |||| ||
Sbjct: 65 atgaatctagatctaaattcattagcatcaatatgaatgtagaaaatgctagaatgattt 124
Query: 127 acattgtgaaacgga 141
|||||||||||||||
Sbjct: 125 acattgtgaaacgga 139
Score = 125 bits (63), Expect = 4e-28
Identities = 117/135 (86%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||| ||||| ||| |||| |||||| ||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
|||||| || | || |||||||| ||||||||| |||||||||||| |||| |||||||
Sbjct: 86 atgaatttagatctagattcattagcatcaatataaatatgaaaaatactagaatgactt 27
Query: 127 acattgtgaaacgga 141
|||||||||||||||
Sbjct: 26 acattgtgaaacgga 12
Score = 105 bits (53), Expect = 3e-22
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||| ||||| ||| |||| | | ||| ||||||||| |||||||| || |
Sbjct: 133 tcacaatgtaaatcattctagcattttctacattcatattgatgctaatgaatttagatc 74
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| |||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||
Sbjct: 73 tagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaacg 14
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 147 bits (74), Expect = 1e-34
Identities = 118/132 (89%), Gaps = 3/132 (2%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaa--- 198
||||||| ||||||||| ||| ||||| || ||| ||||||||||||||||| |||
Sbjct: 136 tcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaaactatgtc 77
Query: 199 acatatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaa 258
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 76 acatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaa 17
Query: 259 acggaggaagta 270
||||||||||||
Sbjct: 16 acggaggaagta 5
Score = 135 bits (68), Expect = 4e-31
Identities = 121/138 (87%), Gaps = 3/138 (2%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| ||| |||||||||| ||||||||| ||| |||||| ||||| ||||||||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 67 atgaatctaa---acatatattcattaacatcaatatgaatatgaaaaatgctagtatga 123
||||| ||| ||||| |||||||||||||||||||||| || |||||||||| ||||
Sbjct: 89 atgaaactatgtcacatagattcattaacatcaatatgaatgtggaaaatgctagaatga 30
Query: 124 cttacattgtgaaacgga 141
|||||||| |||||||||
Sbjct: 29 cttacattatgaaacgga 12
Score = 131 bits (66), Expect = 6e-30
Identities = 110/124 (88%), Gaps = 3/124 (2%)
Strand = Plus / Plus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaa---acatatat 206
||||||||| ||| |||| ||| ||| ||||||||||||||||||||| ||||| |
Sbjct: 26 taagtcattctagcattttccacattcatattgatgttaatgaatctatgtgacatagtt 85
Query: 207 tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagga 266
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 86 tcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaaccgaggg 145
Query: 267 agta 270
||||
Sbjct: 146 agta 149
Score = 117 bits (59), Expect = 9e-26
Identities = 112/129 (86%), Gaps = 3/129 (2%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| ||||||||| ||| |||| ||||| ||||||||||||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaat 70
Query: 73 ctaa---acatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttaca 129
||| ||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 71 ctatgtgacatagtttcattaacatcaatatgaatgtgagaaatgctagaatgacttaca 130
Query: 130 ttgtgaaac 138
|||||||||
Sbjct: 131 ttgtgaaac 139
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 147 bits (74), Expect = 1e-34
Identities = 115/129 (89%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||| |||
Sbjct: 127 tcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctataca 68
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||| |||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 67 tat------taacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 262 gaggaagta 270
|||||||||
Sbjct: 13 gaggaagta 5
Score = 131 bits (66), Expect = 6e-30
Identities = 119/137 (86%), Gaps = 6/137 (4%)
Strand = Plus / Minus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||||||||||||||||| ||| ||||| ||||| ||||||||||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgt 83
Query: 65 taatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgac 124
||||||||||| |||| |||||||| ||||||||| || ||||||||| |||||
Sbjct: 82 taatgaatctatacat------attaacattaatatgaatgtgggaaatgctagaatgac 29
Query: 125 ttacattgtgaaacgga 141
|||||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 105 bits (53), Expect = 3e-22
Identities = 111/129 (86%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||| |||||||| || ||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattaatgttaat--atgta---- 71
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 132 gagggagta 140
Score = 89.7 bits (45), Expect = 2e-17
Identities = 109/129 (84%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||| |||||||| ||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat--at 68
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
|| || |||||||||||||||||||||| || ||||||||| |||||||| ||||
Sbjct: 69 gta----tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 125 tgaaacgga 133
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 143 bits (72), Expect = 2e-33
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 146 aatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatata 205
||||||||||||| ||| ||||| || ||| ||||||||| ||||||||||| |||||||
Sbjct: 108 aatataagtcattctagcatttctcacattcatattgatgctaatgaatctagacatata 49
Query: 206 ttcattaacatcaatatgaatgtgaaaaatgctagaatgacttacatt 253
||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 48 ttcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 135 bits (68), Expect = 4e-31
Identities = 98/108 (90%)
Strand = Plus / Minus
Query: 24 aatataagtcattttagtatttcttacatttatattgatgttaatgaatctaaacatata 83
||||||||||||| ||| |||||| ||||| ||||||||| ||||||||||| |||||||
Sbjct: 108 aatataagtcattctagcatttctcacattcatattgatgctaatgaatctagacatata 49
Query: 84 ttcattaacatcaatatgaatatgaaaaatgctagtatgacttacatt 131
||||||| ||||||||||||| ||| ||||||||| ||||||||||||
Sbjct: 48 ttcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 87.7 bits (44), Expect = 8e-17
Identities = 86/100 (86%)
Strand = Plus / Plus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatattca 209
||||||||| ||| ||||| || ||| ||||||||| |||||||| || || |||||
Sbjct: 5 taagtcattctagcatttctcacattcatattgatgctaatgaatatatgtctagattca 64
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 65 ttagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 79.8 bits (40), Expect = 2e-14
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 28 taagtcattttagtatttcttacatttatattgatgttaatgaatctaaacatatattca 87
||||||||| ||| |||||| ||||| ||||||||| |||||||| || || |||||
Sbjct: 5 taagtcattctagcatttctcacattcatattgatgctaatgaatatatgtctagattca 64
Query: 88 ttaacatcaatatgaatatgaaaaatgctagtatgactta 127
||| ||||||||||||| ||| ||||||||| ||||||||
Sbjct: 65 ttagcatcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 143 bits (72), Expect = 2e-33
Identities = 119/135 (88%), Gaps = 6/135 (4%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| ||| |||||| | ||| ||||||||| ||||||||||| |||
Sbjct: 139 tcacaatataagtcattctagcatttcctacattcatattgatgctaatgaatctagaca 80
Query: 202 tatat------tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgt 255
||||| |||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 79 tatatctagattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgt 20
Query: 256 gaaacggaggaagta 270
|||||||||||||||
Sbjct: 19 gaaacggaggaagta 5
Score = 139 bits (70), Expect = 2e-32
Identities = 123/141 (87%), Gaps = 6/141 (4%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||||||||||||| ||| ||||| |||||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 67 atgaatctaaacatat------attcattaacatcaatatgaatatgaaaaatgctagta 120
||||||||| |||||| |||||||| ||||||||||||| || ||||||||| |
Sbjct: 92 atgaatctagacatatatctagattcattagcatcaatatgaatgtgggaaatgctagaa 33
Query: 121 tgacttacattgtgaaacgga 141
|||||||||||||||||||||
Sbjct: 32 tgacttacattgtgaaacgga 12
Score = 111 bits (56), Expect = 5e-24
Identities = 115/135 (85%), Gaps = 6/135 (4%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||| ||||||||||| | |
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatctagata 77
Query: 202 tat------attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgt 255
||| |||||||| ||||||||||||||| |||||||||||||||||| |||||
Sbjct: 78 tatgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgacttatattgt 137
Query: 256 gaaacggaggaagta 270
|||||||||| ||||
Sbjct: 138 gaaacggagggagta 152
Score = 95.6 bits (48), Expect = 3e-19
Identities = 113/135 (83%), Gaps = 6/135 (4%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaat 70
Query: 73 ctaaacatat------attcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||| | |||| |||||||| ||||||||||||| | ||||||||| |||||||
Sbjct: 71 ctagatatatgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgactt 130
Query: 127 acattgtgaaacgga 141
| |||||||||||||
Sbjct: 131 atattgtgaaacgga 145
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 141 bits (71), Expect = 6e-33
Identities = 119/135 (88%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||| ||||||||| |||| |||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
|||||| || | || |||||||| ||||||||||||| ||||||||||||| || ||||
Sbjct: 86 atgaatttagatctagattcattagcatcaatatgaatgtgaaaaatgctagaataactt 27
Query: 127 acattgtgaaacgga 141
|||||||||||||||
Sbjct: 26 acattgtgaaacgga 12
Score = 137 bits (69), Expect = 9e-32
Identities = 114/129 (88%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||| ||||||||| |||| | | ||||||||||||| |||||||| || |
Sbjct: 133 tcacaatgtaaatcattttagcattttctacatttatattgatgctaatgaatttagatc 74
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaacg 14
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 13 gagggagta 5
Score = 101 bits (51), Expect = 5e-21
Identities = 114/135 (84%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||| ||| ||| |||| | ||||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||| | || |||||||| ||||||||| ||| | ||||||||| |||| ||
Sbjct: 65 atgaatctagatctaaattcattagcatcaatataaatgtagaaaatgctaaaatgattt 124
Query: 127 acattgtgaaacgga 141
|||||||||||||||
Sbjct: 125 acattgtgaaacgga 139
Score = 101 bits (51), Expect = 5e-21
Identities = 111/131 (84%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||| ||| ||| |||| || ||| ||||||||| ||||||||||| |
Sbjct: 18 tcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaatctagatc 77
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| |||||||| ||||||||| ||||| ||||||||| ||||| |||||||||||||||
Sbjct: 78 taaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaacg 137
Query: 262 gaggaagtaac 272
|||| ||||||
Sbjct: 138 gagggagtaac 148
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 139 bits (70), Expect = 2e-32
Identities = 114/129 (88%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| ||| |||| ||| ||| ||||||||||||||||||||| |||
Sbjct: 127 tcacaatataagtcattctagcattttccacattcatattgatgttaatgaatctataca 68
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||| |||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 67 tat------taacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 262 gaggaagta 270
|||||||||
Sbjct: 13 gaggaagta 5
Score = 123 bits (62), Expect = 1e-27
Identities = 118/137 (86%), Gaps = 6/137 (4%)
Strand = Plus / Minus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||||||||||||||||| ||| |||| ||||| ||||||||||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgt 83
Query: 65 taatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgac 124
||||||||||| |||| |||||||| ||||||||| || ||||||||| |||||
Sbjct: 82 taatgaatctatacat------attaacattaatatgaatgtgggaaatgctagaatgac 29
Query: 125 ttacattgtgaaacgga 141
|||||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 113 bits (57), Expect = 1e-24
Identities = 112/129 (86%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||| |||||||| || ||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattaatgttaat--atgta---- 71
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 132 gagggagta 140
Score = 97.6 bits (49), Expect = 8e-20
Identities = 110/129 (85%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||| |||||||| ||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat--at 68
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
|| || |||||||||||||||||||||| || |||||||||| |||||||| ||||
Sbjct: 69 gta----tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 125 tgaaacgga 133
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 139 bits (70), Expect = 2e-32
Identities = 114/129 (88%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||||||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagaca 77
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||||| ||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 78 tatat------acatcaatatgtatgtacaaaatgctagaatgacttacattgtgaaacg 131
Query: 262 gaggaagta 270
|||||||||
Sbjct: 132 gaggaagta 140
Score = 115 bits (58), Expect = 3e-25
Identities = 111/129 (86%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| |||||||| ||||||||||| || | |||||||||| |||||||||||||
Sbjct: 71 ctagacatatat------acatcaatatgtatgtacaaaatgctagaatgacttacattg 124
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 125 tgaaacgga 133
Score = 107 bits (54), Expect = 8e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 gtagta 5
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 139 bits (70), Expect = 2e-32
Identities = 114/129 (88%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||| |
Sbjct: 18 tcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctaga-- 75
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||||||||||||||||||||| || |||||||||||||||||||||| |||||||
Sbjct: 76 ----ttcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacg 131
Query: 262 gaggaagta 270
|||||||||
Sbjct: 132 gaggaagta 140
Score = 131 bits (66), Expect = 6e-30
Identities = 107/121 (88%), Gaps = 6/121 (4%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatattca 209
||||||||| ||| |||||||||||| ||||||||||||||||||||| | ||||
Sbjct: 119 taagtcattctagcatttcccatattcatattgatgttaatgaatctaga------ttca 66
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagt 269
||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||
Sbjct: 65 ttaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 270 a 270
|
Sbjct: 5 a 5
Score = 121 bits (61), Expect = 6e-27
Identities = 117/136 (86%), Gaps = 6/136 (4%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||||||||| ||| ||||| | ||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 66 aatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgact 125
|||||||||| | |||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 64 aatgaatctaga------ttcattaacatcaatatgaatatgggaaatgctagaatgact 117
Query: 126 tacattgtgaaacgga 141
|||||| |||||||||
Sbjct: 118 tacattatgaaacgga 133
Score = 115 bits (58), Expect = 3e-25
Identities = 111/129 (86%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| ||||||||| ||| ||||| | ||| ||||||||||||||||||
Sbjct: 134 ctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaat 75
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| | |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 74 ctaga------ttcattaacatcaatatgaatatgggaaatgctagaatgacttacattg 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 137 bits (69), Expect = 9e-32
Identities = 114/129 (88%), Gaps = 5/129 (3%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||||||||||||| |
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc-----a 72
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 73 ttgattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacg 132
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 133 gagggagta 141
Score = 123 bits (62), Expect = 1e-27
Identities = 113/130 (86%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||| ||||| ||| ||||| || ||| ||||||||||||||||||| |
Sbjct: 128 tcacaatgtaattcattctagcatttctcacattcatattgatgttaatgaatcaatg-- 71
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 70 ---attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 262 gaggaagtaa 271
||||||||||
Sbjct: 13 gaggaagtaa 4
Score = 121 bits (61), Expect = 6e-27
Identities = 112/129 (86%), Gaps = 5/129 (3%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
| || |||||||||||||||||||||| ||| ||||||||| |||| ||||||||
Sbjct: 71 c-----attgattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattg 125
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 126 tgaaacgga 134
Score = 121 bits (61), Expect = 6e-27
Identities = 118/137 (86%), Gaps = 5/137 (3%)
Strand = Plus / Minus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||||||| ||| ||||| ||| |||||| ||||| ||||||||||
Sbjct: 143 tgtactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgt 84
Query: 65 taatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgac 124
||||||||| | |||||||||||||||||||||| || ||||||||| |||||
Sbjct: 83 taatgaatcaatg-----attcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 125 ttacattgtgaaacgga 141
|||||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 135 bits (68), Expect = 4e-31
Identities = 113/128 (88%)
Strand = Plus / Minus
Query: 143 cacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaacat 202
|||||||||||||||| ||| |||| | ||||| ||||||||||||||||||||| | |
Sbjct: 132 cacaatataagtcattctagcatttactatattcatattgatgttaatgaatctagatct 73
Query: 203 atattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacgg 262
| ||||||||||||||||||||||||| ||||| || ||||||||||||| ||||||||
Sbjct: 72 agattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacgg 13
Query: 263 aggaagta 270
||| ||||
Sbjct: 12 agggagta 5
Score = 129 bits (65), Expect = 2e-29
Identities = 107/121 (88%)
Strand = Plus / Plus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatattca 209
|||||||||||| |||||||| ||| ||||||||||||||||||||| | || |||||
Sbjct: 26 taagtcattttaccatttcccacattcatattgatgttaatgaatctagatctagattca 85
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagt 269
||||||||||||||||| | |||||||||||||||||| |||||| ||||||||||||
Sbjct: 86 ttaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaacggaggaagt 145
Query: 270 a 270
|
Sbjct: 146 a 146
Score = 125 bits (63), Expect = 4e-28
Identities = 117/135 (86%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| |||||||||||| ||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||| | || |||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 65 atgaatctagatctagattcattaacatcaatatgaatatagtaaatgctagaatgactt 124
Query: 127 acattgtgaaacgga 141
| |||||| ||||||
Sbjct: 125 atattgtggaacgga 139
Score = 113 bits (57), Expect = 1e-24
Identities = 111/129 (86%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
||||||| |||||||||||||||| ||| |||| || ||| ||||||||||||||||||
Sbjct: 140 ctccgttccacaatataagtcattctagcatttactatattcatattgatgttaatgaat 81
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| | || |||||||||||||||||||||| || ||||| || ||||||||||||
Sbjct: 80 ctagatctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacatta 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 135 bits (68), Expect = 4e-31
Identities = 118/135 (87%), Gaps = 6/135 (4%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||||| | |
Sbjct: 139 tcacaatataagtcattttagcattttccacatttatattgatgctaatgaatctagaga 80
Query: 202 tatat------tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgt 255
||||| |||||| ||||||| | ||||||| |||||||| |||||||||||||||
Sbjct: 79 tatatctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgt 20
Query: 256 gaaacggaggaagta 270
|||||||||||||||
Sbjct: 19 gaaacggaggaagta 5
Score = 115 bits (58), Expect = 3e-25
Identities = 120/141 (85%), Gaps = 6/141 (4%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 67 atgaatctaaacatat------attcattaacatcaatatgaatatgaaaaatgctagta 120
||||||||| | |||| |||||||| ||||||| | ||| ||| |||||||| |
Sbjct: 92 atgaatctagagatatatctaaattcattagcatcaatgtaaatgtgagaaatgctaaaa 33
Query: 121 tgacttacattgtgaaacgga 141
|||||||||||||||||||||
Sbjct: 32 tgacttacattgtgaaacgga 12
Score = 103 bits (52), Expect = 1e-21
Identities = 114/135 (84%), Gaps = 6/135 (4%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||||||| |||||| ||||||| ||||||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaatgaat 70
Query: 73 ctaaacatat------attcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
|| | |||| |||||||| ||||||||| ||| || ||||||||| |||||||
Sbjct: 71 ttagatatatctctagattcattagcatcaatataaatgtggaaaatgctaaaatgactt 130
Query: 127 acattgtgaaacgga 141
| |||||||||||||
Sbjct: 131 atattgtgaaacgga 145
Score = 103 bits (52), Expect = 1e-21
Identities = 114/135 (84%), Gaps = 6/135 (4%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||||||| ||||| || ||||| ||||||| |||||||| || | |
Sbjct: 18 tcacaatgtaagtcattttagcatttctcacatttacattgatgctaatgaatttagata 77
Query: 202 tat------attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgt 255
||| |||||||| ||||||||| |||||| ||||||||| ||||||||| |||||
Sbjct: 78 tatctctagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgt 137
Query: 256 gaaacggaggaagta 270
|||||||||| ||||
Sbjct: 138 gaaacggagggagta 152
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 135 bits (68), Expect = 4e-31
Identities = 113/128 (88%)
Strand = Plus / Plus
Query: 143 cacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaacat 202
|||||||||||||||| ||| |||| | ||||| ||||||||||||||||||||| | |
Sbjct: 19 cacaatataagtcattctagcatttactatattcatattgatgttaatgaatctagatct 78
Query: 203 atattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacgg 262
| ||||||||||||||||||||||||| ||||| || ||||||||||||| ||||||||
Sbjct: 79 agattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacgg 138
Query: 263 aggaagta 270
||| ||||
Sbjct: 139 agggagta 146
Score = 129 bits (65), Expect = 2e-29
Identities = 107/121 (88%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatattca 209
|||||||||||| |||||||| ||| ||||||||||||||||||||| | || |||||
Sbjct: 125 taagtcattttaccatttcccacattcatattgatgttaatgaatctagatctagattca 66
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagt 269
||||||||||||||||| | |||||||||||||||||| |||||| ||||||||||||
Sbjct: 65 ttaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaacggaggaagt 6
Query: 270 a 270
|
Sbjct: 5 a 5
Score = 125 bits (63), Expect = 4e-28
Identities = 117/135 (86%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| |||||||||||| ||||| ||||| ||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||| | || |||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 86 atgaatctagatctagattcattaacatcaatatgaatatagtaaatgctagaatgactt 27
Query: 127 acattgtgaaacgga 141
| |||||| ||||||
Sbjct: 26 atattgtggaacgga 12
Score = 113 bits (57), Expect = 1e-24
Identities = 111/129 (86%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
||||||| |||||||||||||||| ||| |||| || ||| ||||||||||||||||||
Sbjct: 11 ctccgttccacaatataagtcattctagcatttactatattcatattgatgttaatgaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| | || |||||||||||||||||||||| || ||||| || ||||||||||||
Sbjct: 71 ctagatctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacatta 130
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 131 tgaaacgga 139
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 135 bits (68), Expect = 4e-31
Identities = 120/139 (86%), Gaps = 10/139 (7%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 143 tcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaatctggaca 84
Query: 202 tat----------attcattaacatcaatatgaatgtgaaaaatgctagaatgacttaca 251
||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 83 tatgcctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 252 ttgtgaaacggaggaagta 270
|||||||||||||| ||||
Sbjct: 23 ttgtgaaacggagggagta 5
Score = 119 bits (60), Expect = 2e-26
Identities = 118/139 (84%), Gaps = 10/139 (7%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||| ||||| || |||||||||||||||||||||
Sbjct: 150 ctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaat 91
Query: 73 ctaaacatat----------attcattaacatcaatatgaatatgaaaaatgctagtatg 122
|| |||||| |||||||||||||||||||||| || ||||||||| |||
Sbjct: 90 ctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgctagaatg 31
Query: 123 acttacattgtgaaacgga 141
|||||||||||||||||||
Sbjct: 30 acttacattgtgaaacgga 12
Score = 109 bits (55), Expect = 2e-23
Identities = 118/139 (84%), Gaps = 10/139 (7%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaa-- 199
||||||| ||||||||| ||| |||||||| ||| ||||||||||||||||||||| |
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagata 77
Query: 200 --catat------attcattaacatcaatatgaatgtgaaaaatgctagaatgacttaca 251
||||| |||||||||||||||||| || ||| |||||||||||||||||| |
Sbjct: 78 ggcatatgtccagattcattaacatcaatataaacgtgggaaatgctagaatgacttata 137
Query: 252 ttgtgaaacggaggaagta 270
|||||||||||||||||||
Sbjct: 138 ttgtgaaacggaggaagta 156
Score = 93.7 bits (47), Expect = 1e-18
Identities = 122/147 (82%), Gaps = 10/147 (6%)
Strand = Plus / Plus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 65 taatgaatctaaa----catat------attcattaacatcaatatgaatatgaaaaatg 114
||||||||||| | ||||| |||||||||||||||||| || || |||||
Sbjct: 63 taatgaatctagataggcatatgtccagattcattaacatcaatataaacgtgggaaatg 122
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| |||||||| |||||||||||||
Sbjct: 123 ctagaatgacttatattgtgaaacgga 149
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 4e-31
Identities = 121/141 (85%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||| ||||||| ||||||||||||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatctataca 77
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 78 tatatatttatctagattcattaacatcaatatgaatgtgggaaatgctagaatgactta 137
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||||||||
Sbjct: 138 cattgtgaaacggaggaagta 158
Score = 117 bits (59), Expect = 9e-26
Identities = 120/141 (85%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatcta---- 197
||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagata 86
Query: 198 aacatatat--------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
|| |||||| |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 85 aatatatatgtatagattcattaacatcaatatgaatatggaaaatgctagaatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||| ||||
Sbjct: 25 cattgtgaaacggagggagta 5
Score = 117 bits (59), Expect = 9e-26
Identities = 120/141 (85%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 93
Query: 73 cta----aacatatat--------tcattaacatcaatatgaatatgaaaaatgctagta 120
||| || |||||| ||||||||||||||||||||||| |||||||||| |
Sbjct: 92 ctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatgctagaa 33
Query: 121 tgacttacattgtgaaacgga 141
|||||||||||||||||||||
Sbjct: 32 tgacttacattgtgaaacgga 12
Score = 101 bits (51), Expect = 5e-21
Identities = 122/148 (82%), Gaps = 12/148 (8%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||||||||| ||| |||| | ||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 66 aatgaatctaaacatatat------------tcattaacatcaatatgaatatgaaaaat 113
|||||||||| |||||||| |||||||||||||||||||| || ||||
Sbjct: 64 aatgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaat 123
Query: 114 gctagtatgacttacattgtgaaacgga 141
||||| ||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 135 bits (68), Expect = 4e-31
Identities = 121/141 (85%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| |||||||||||| ||| |||||| |||||||||||||| |||
Sbjct: 145 tcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatctagaca 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 85 tatatatctatctagattcattaacatcaatatggatgtggaaaatgctagaatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 115 bits (58), Expect = 3e-25
Identities = 123/147 (83%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||||||||| ||||| |||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 67 atgaatctaaacatat------------attcattaacatcaatatgaatatgaaaaatg 114
||||||||| |||||| ||||||||||||||||||| || || ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| ||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 93 attcattaacaacaatatgaatgtgggaaatactagaatgacttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||| |||||||||| || |||| |||| ||||||||||||||||||||||
Sbjct: 93 attcattaacaacaatatgaatgtgggaaatactagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 133 bits (67), Expect = 1e-30
Identities = 119/138 (86%), Gaps = 10/138 (7%)
Strand = Plus / Minus
Query: 143 cacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaacat 202
|||||| ||||||||| ||| |||||||| ||| ||||||||||||||||||||| ||||
Sbjct: 142 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagacat 83
Query: 203 atat----------tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacat 252
|||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 82 atatatgtctacattcattaacatcaatatgaatgtagaaaatgctagaatgacttacat 23
Query: 253 tgtgaaacggaggaagta 270
|||| |||||||||||||
Sbjct: 22 tgtggaacggaggaagta 5
Score = 111 bits (56), Expect = 5e-24
Identities = 123/147 (83%), Gaps = 10/147 (6%)
Strand = Plus / Minus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| ||||||| |||||| ||||||||| ||| ||||| ||||| ||||||||||
Sbjct: 158 tgtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgt 99
Query: 65 taatgaatctaaacatat----------attcattaacatcaatatgaatatgaaaaatg 114
||||||||||| |||||| |||||||||||||||||||||| | ||||||
Sbjct: 98 taatgaatctagacatatatatgtctacattcattaacatcaatatgaatgtagaaaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| ||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtggaacgga 12
Score = 101 bits (51), Expect = 5e-21
Identities = 115/138 (83%), Gaps = 10/138 (7%)
Strand = Plus / Plus
Query: 143 cacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaacat 202
|||||| ||||||||| ||| |||| | | ||| |||||||||||||||||| || ||||
Sbjct: 19 cacaatgtaagtcattctagcattttctacattcatattgatgttaatgaatgtagacat 78
Query: 203 atat----------tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacat 252
|||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 79 atatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacat 138
Query: 253 tgtgaaacggaggaagta 270
|||| |||||||| ||||
Sbjct: 139 tgtggaacggagggagta 156
Score = 95.6 bits (48), Expect = 3e-19
Identities = 115/139 (82%), Gaps = 10/139 (7%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
||||||| |||||| ||||||||| ||| |||| |||||| ||||||||||||||||||
Sbjct: 11 ctccgttccacaatgtaagtcattctagcattttctacattcatattgatgttaatgaat 70
Query: 73 ctaaacatatat----------tcattaacatcaatatgaatatgaaaaatgctagtatg 122
|| |||||||| |||||||||||||||||||| || ||||||||| |||
Sbjct: 71 gtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatg 130
Query: 123 acttacattgtgaaacgga 141
|||||||||||| ||||||
Sbjct: 131 acttacattgtggaacgga 149
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 133 bits (67), Expect = 1e-30
Identities = 119/136 (87%), Gaps = 4/136 (2%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||||||||| ||| |||||| ||||| |||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatt 63
Query: 66 aatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgact 125
||||||||| | |||| |||| ||||||||||||||||| ||||||||| ||||||
Sbjct: 64 aatgaatct----agatatccattgacatcaatatgaatatgggaaatgctagaatgact 119
Query: 126 tacattgtgaaacgga 141
||||||||||||||||
Sbjct: 120 tacattgtgaaacgga 135
Score = 127 bits (64), Expect = 9e-29
Identities = 113/129 (87%), Gaps = 4/129 (3%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||||||| |||||||||| |||| || |
Sbjct: 129 tcacaatgtaagtcattctagcatttcccatattcatattgatgtcaatggatatc---- 74
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 13 gagggagta 5
Score = 119 bits (60), Expect = 2e-26
Identities = 112/129 (86%), Gaps = 4/129 (3%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| ||||| || ||| |||||||| |||||||||||| |
Sbjct: 18 tcacaatgtaagtcattctagcatttctcacattcatattgatattaatgaatctaga-- 75
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||| |||| |||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 76 --tatccattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 133
Query: 262 gaggaagta 270
|||||||||
Sbjct: 134 gaggaagta 142
Score = 95.6 bits (48), Expect = 3e-19
Identities = 109/129 (84%), Gaps = 4/129 (3%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| | ||| |||||||||| |||| ||
Sbjct: 136 ctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtcaatggat 77
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
| || ||||||||| |||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 76 atc----tagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattg 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 9e-29
Identities = 120/141 (85%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| ||| |||| | ||||| ||||||||| ||||||||||| |||
Sbjct: 145 tcacaatataagtcattctagcattttctatattcatattgatgctaatgaatctagaca 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| ||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 85 tatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctagaatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 107 bits (54), Expect = 8e-23
Identities = 122/147 (82%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||||||||||||| ||| |||| || ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 67 atgaatctaaacatatat------------tcattaacatcaatatgaatatgaaaaatg 114
||||||||| |||||||| ||||||||||||||| |||| || ||||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| ||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||||
Sbjct: 93 attcattagcatcaatatgaatatagaaaatgctagaatgacttatattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 93 attcattagcatcaatatgaatatagaaaatgctagaatgacttatattgtgaaacgga 151
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 127 bits (64), Expect = 9e-29
Identities = 120/139 (86%), Gaps = 11/139 (7%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
|||||||||||||||||||| ||||||||| || ||||| ||||| ||||||||||||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 67 atgaatctaaacatat----attcattaacatcaatatgaatatgaaaaatgctagtatg 122
|||||||||||||||| ||||||||||||||||||| |||||||||| |||
Sbjct: 65 atgaatctaaacatatctagattcattaacatcaatatg-------aaaatgctagaatg 117
Query: 123 acttacattgtgaaacgga 141
|||||||||||||||||||
Sbjct: 118 acttacattgtgaaacgga 136
Score = 119 bits (60), Expect = 2e-26
Identities = 110/127 (86%), Gaps = 11/127 (8%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| || |||||||| ||| |||||||||||||||||||||||||
Sbjct: 18 tcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctaaaca 77
Query: 202 tat----attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtga 257
||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 78 tatctagattcattaacatcaatatg-------aaaatgctagaatgacttacattgtga 130
Query: 258 aacggag 264
|||||||
Sbjct: 131 aacggag 137
Score = 101 bits (51), Expect = 5e-21
Identities = 82/92 (89%), Gaps = 4/92 (4%)
Strand = Plus / Minus
Query: 177 atattgatgttaatgaatctaaacatat----attcattaacatcaatatgaatgtgaaa 232
||||||||||||||||||||| | || | ||||||||||||||||||||||||| |
Sbjct: 102 atattgatgttaatgaatctagatatgtttagattcattaacatcaatatgaatgtggga 43
Query: 233 aatgctagaatgacttacattgtgaaacggag 264
|||| |||||||||||||||||||||||||||
Sbjct: 42 aatgttagaatgacttacattgtgaaacggag 11
Score = 97.6 bits (49), Expect = 8e-20
Identities = 117/140 (83%), Gaps = 11/140 (7%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
||||||||||||||||||||| ||||||||| ||| |||| | |||||||||||
Sbjct: 144 gtactctctccgtttcacaatgtaagtcattctagcattt-------tcatattgatgtt 92
Query: 66 aatgaatctaaacatat----attcattaacatcaatatgaatatgaaaaatgctagtat 121
|||||||||| | || | |||||||||||||||||||||| || ||||| ||| ||
Sbjct: 91 aatgaatctagatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaat 32
Query: 122 gacttacattgtgaaacgga 141
||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacgga 12
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 127 bits (64), Expect = 9e-29
Identities = 119/135 (88%), Gaps = 3/135 (2%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||||||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtt 89
Query: 66 aatgaatctaaacatatatt--cattaacatcaatatgaatatgaaaaatgctagtatga 123
|||||||||| ||| | ||| |||||||||||||| ||| ||| |||| ||| ||||
Sbjct: 88 aatgaatctagaca-acattaatattaacatcaatataaatgtgacaaatactaaaatga 30
Query: 124 cttacattgtgaaac 138
|||||||||||||||
Sbjct: 29 cttacattgtgaaac 15
Score = 119 bits (60), Expect = 2e-26
Identities = 115/131 (87%), Gaps = 3/131 (2%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||||||||||||| || ||| ||||||||||||||||||||| |||
Sbjct: 134 tcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaatctagaca 75
Query: 202 tatatt--cattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaa 259
| ||| |||||||||||||| ||||||| |||| ||| |||||||||||||||||||
Sbjct: 74 -acattaatattaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaa 16
Query: 260 cggaggaagta 270
| |||| ||||
Sbjct: 15 cagagggagta 5
Score = 111 bits (56), Expect = 5e-24
Identities = 114/131 (87%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatg--aatctaaa 199
||||||| |||||||||||||||||| || |||||||||||||||||| ||| |
Sbjct: 18 tcacaatgtaagtcattttagtatttgtcacatttatattgatgttaatattaatgttgt 77
Query: 200 catatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaa 259
| || |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||
Sbjct: 78 c-tagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136
Query: 260 cggaggaagta 270
|||||| ||||
Sbjct: 137 cggagggagta 147
Score = 109 bits (55), Expect = 2e-23
Identities = 119/138 (86%), Gaps = 3/138 (2%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| ||| |||||||||| |||||||||||||||||| | |||||||||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgtt 63
Query: 66 a--atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatga 123
| || ||| | | || |||||||||||||||||||||| ||| |||| ||| ||||
Sbjct: 64 aatattaatgttgtc-tagattcattaacatcaatatgaatgtgagaaatactaaaatga 122
Query: 124 cttacattgtgaaacgga 141
||||||||||||||||||
Sbjct: 123 cttacattgtgaaacgga 140
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 125 bits (63), Expect = 4e-28
Identities = 112/129 (86%), Gaps = 7/129 (5%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaatctagaca 77
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| || |||||||||||||||| ||||||||| ||||||||| |||||||||||
Sbjct: 78 ta-------tagcatcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacg 130
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 131 gagggagta 139
Score = 109 bits (55), Expect = 2e-23
Identities = 110/129 (85%), Gaps = 7/129 (5%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||||||| |||||| | ||||||||||||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| ||||| || ||||||||||||| || ||||||||| |||||||| ||||
Sbjct: 71 ctagacata-------tagcatcaatatgaatgtggaaaatgctaaaatgacttatattg 123
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 124 tgaaacgga 132
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||||||||| ||| ||| |||||||| ||||||||||||||||||||||||
Sbjct: 70 attcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 83.8 bits (42), Expect = 1e-15
Identities = 114/136 (83%), Gaps = 9/136 (6%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||| ||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatgcta 80
Query: 67 -atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgact 125
||| |||| | ||||||| ||||||||| ||||||| |||||||| ||||||
Sbjct: 79 tatg--tctaga------ttcattagcatcaatataaatatgagaaatgctaaaatgact 28
Query: 126 tacattgtgaaacgga 141
||||||||||||||||
Sbjct: 27 tacattgtgaaacgga 12
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 125 bits (63), Expect = 4e-28
Identities = 113/129 (87%), Gaps = 8/129 (6%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| || |||||| |||||| |||||||||||||| ||
Sbjct: 132 ctccgtttcacaatataagtcattctactatttcctacattcatattgatgttaat--at 75
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| | ||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 74 ctaga------ttcattaacatcaatatgaatatagaaaatgctagaatgacttacattg 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 109 bits (55), Expect = 2e-23
Identities = 111/129 (86%), Gaps = 8/129 (6%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| || ||||||| | ||| |||||||||||||| ||||| |
Sbjct: 125 tcacaatataagtcattctactatttcctacattcatattgatgttaat--atctaga-- 70
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 69 ----ttcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaacg 14
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 13 gagggagta 5
Score = 87.7 bits (44), Expect = 8e-17
Identities = 107/129 (82%), Gaps = 8/129 (6%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||| | ||||| ||||||||||||||||||||| | |
Sbjct: 18 tcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaatctagata 77
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
| |||||||||||||||||| |||| |||||||||||| |||||||||||
Sbjct: 78 t--------taacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacg 129
Query: 262 gaggaagta 270
|||||||||
Sbjct: 130 gaggaagta 138
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||||||||| ||| |||| || ||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtt 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 123 bits (62), Expect = 1e-27
Identities = 113/129 (87%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||||| || |||||| |||
Sbjct: 131 tcacaatgtaagtcattctagcatttcccacattcatattgatgttcataaatctagaca 72
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| |||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 71 aat--tcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacg 14
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 13 gagggagta 5
Score = 107 bits (54), Expect = 8e-23
Identities = 111/129 (86%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||| || |||
Sbjct: 138 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttcataaat 79
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| ||| || |||| ||||||||||||||| || ||||||||| ||| |||||||||
Sbjct: 78 ctagacaaat--tcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattg 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 107 bits (54), Expect = 8e-23
Identities = 111/129 (86%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| |||| |||| ||| |||||||| ||| ||||||||||| |||||| |
Sbjct: 18 tcacaatgtaagccattctagcatttcccacattcatattgatgttcatgaatttgtc-- 75
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| ||| || |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 76 tagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 135
Query: 262 gaggaagta 270
|||||||||
Sbjct: 136 gaggaagta 144
Score = 89.7 bits (45), Expect = 2e-17
Identities = 114/136 (83%), Gaps = 2/136 (1%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| |||| |||| ||| ||||| ||||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgtt 63
Query: 66 aatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgact 125
|||||| | || ||| || ||||||||||||||| || ||||||||| ||||||
Sbjct: 64 catgaatttgtc--tagatttatgaacatcaatatgaatgtgggaaatgctagaatgact 121
Query: 126 tacattgtgaaacgga 141
||||||||||||||||
Sbjct: 122 tacattgtgaaacgga 137
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 123 bits (62), Expect = 1e-27
Identities = 119/140 (85%), Gaps = 11/140 (7%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| || |||||||||||||||||| ||||||||||||||| | |
Sbjct: 144 tcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaatctagata 85
Query: 202 tatattc-----------attaacatcaatatgaatgtgaaaaatgctagaatgacttac 250
||||||| |||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 84 tatattctatctagattcattaccatcaatatgaatgtgagaaatgctagaatgacttac 25
Query: 251 attgtgaaacggaggaagta 270
|||| |||||||||||||||
Sbjct: 24 attgcgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 8e-17
Identities = 119/146 (81%), Gaps = 11/146 (7%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| || ||||| | ||||||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 67 atgaatctaaacatatattc-----------attaacatcaatatgaatatgaaaaatgc 115
||||||||| | |||||||| |||| ||||||||||||| ||| ||||||
Sbjct: 97 atgaatctagatatatattctatctagattcattaccatcaatatgaatgtgagaaatgc 38
Query: 116 tagtatgacttacattgtgaaacgga 141
||| ||||||||||||| ||||||||
Sbjct: 37 tagaatgacttacattgcgaaacgga 12
Score = 81.8 bits (41), Expect = 5e-15
Identities = 115/140 (82%), Gaps = 11/140 (7%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
||||||||| |||| ||||||||| ||| |||||| ||||| ||||||||| ||||||||
Sbjct: 11 ctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatgaat 70
Query: 73 cta-----aacatat------attcattaacatcaatatgaatatgaaaaatgctagtat 121
||| || |||| |||||||||||| ||||| |||||| ||||| ||| ||
Sbjct: 71 ctagatagaatatatatctagattcattaacattaatataaatatgggaaatgttagaat 130
Query: 122 gacttacattgtgaaacgga 141
||||||||||||||||||||
Sbjct: 131 gacttacattgtgaaacgga 150
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||| ||||| ||| || ||||| |||||||||||||||||||||||||||
Sbjct: 92 attcattaacattaatataaatatgggaaatgttagaatgacttacattgtgaaacggag 151
Query: 265 gaagta 270
| ||||
Sbjct: 152 ggagta 157
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 123 bits (62), Expect = 1e-27
Identities = 68/70 (97%)
Strand = Plus / Minus
Query: 201 atatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaac 260
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 74 atatattcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 15
Query: 261 ggaggaagta 270
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 79 atatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaac 138
||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||||||||
Sbjct: 74 atatattcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 15
Query: 139 gga 141
|||
Sbjct: 14 gga 12
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||| || ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 97 atatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacgga 123
Score = 71.9 bits (36), Expect = 5e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| |||||| ||||| |||||| |||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatgaat 70
Score = 46.1 bits (23), Expect = 3e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtattt 45
||||| |||||||||||||| ||||||||| ||| ||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattt 92
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 123 bits (62), Expect = 1e-27
Identities = 116/134 (86%), Gaps = 5/134 (3%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| || ||||||||| ||| ||||||||||||||||| ||| |
Sbjct: 18 tcacaatataagtcattctattatttcccacattcatattgatgttaatgaaactacatc 77
Query: 202 tatat-----tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtg 256
||| | |||||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 78 tatttaagtttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtg 137
Query: 257 aaacggaggaagta 270
||||||||||||||
Sbjct: 138 aaacggaggaagta 151
Score = 113 bits (57), Expect = 1e-24
Identities = 116/134 (86%), Gaps = 5/134 (3%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaac- 200
||||||| ||||||||| |||||||||||| ||||||||||||||||||||| || ||
Sbjct: 138 tcacaatgtaagtcattctagtatttcccacatttatattgatgttaatgaaacttaaat 79
Query: 201 --atata--ttcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtg 256
|| || |||||||||||||||||||||||| |||| |||||||||||| ||||||
Sbjct: 78 agatgtagtttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtg 19
Query: 257 aaacggaggaagta 270
||||||||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 103 bits (52), Expect = 1e-21
Identities = 118/140 (84%), Gaps = 5/140 (3%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||||||||||||| || |||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 67 atgaatctaaacatat-----attcattaacatcaatatgaatatgaaaaatgctagtat 121
||||| ||| | ||| ||||||||||||||||| ||| || |||| |||| ||
Sbjct: 65 atgaaactacatctatttaagtttcattaacatcaatataaatgtgggaaatactagaat 124
Query: 122 gacttacattgtgaaacgga 141
||||||||||||||||||||
Sbjct: 125 gacttacattgtgaaacgga 144
Score = 97.6 bits (49), Expect = 8e-20
Identities = 114/134 (85%), Gaps = 5/134 (3%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 145 ctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgttaatgaaa 86
Query: 73 c-taaaca----tatattcattaacatcaatatgaatatgaaaaatgctagtatgactta 127
| |||| | || ||||||||||||||||||||| || |||| ||| ||||||||
Sbjct: 85 cttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaatgactta 26
Query: 128 cattgtgaaacgga 141
|||||||||||||
Sbjct: 25 tattgtgaaacgga 12
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 121 bits (61), Expect = 6e-27
Identities = 120/142 (84%), Gaps = 12/142 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| || ||||||||| ||| |||||||||||||||||| || |||
Sbjct: 145 tcacaatgtaagtcattctaatatttcccacattcatattgatgttaatgaatgtagaca 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 85 tatatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgactta 26
Query: 250 cattgtgaaacggaggaagtaa 271
|||||||||||||||| |||||
Sbjct: 25 cattgtgaaacggagggagtaa 4
Score = 103 bits (52), Expect = 1e-21
Identities = 117/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| || |||||| ||||| ||||||||||||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatgaat 93
Query: 73 ctaaacatatat------------tcattaacatcaatatgaatatgaaaaatgctagta 120
|| |||||||| |||||||||||||||||||| || ||||||||| |
Sbjct: 92 gtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Query: 121 tgacttacattgtgaaacgga 141
|||||||||||||||||||||
Sbjct: 32 tgacttacattgtgaaacgga 12
Score = 103 bits (52), Expect = 1e-21
Identities = 117/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||||||||||||||| | |
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagata 77
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
|||| ||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 78 gatatatatgtctacattcattaacatcaatatgaatgtgggaaatattagaatgactta 137
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||||||||
Sbjct: 138 cattgtgaaacggaggaagta 158
Score = 83.8 bits (42), Expect = 1e-15
Identities = 119/147 (80%), Gaps = 12/147 (8%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 67 atgaatctaaaca------------tatattcattaacatcaatatgaatatgaaaaatg 114
||||||||| | | || |||||||||||||||||||||| || ||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 115 ctagtatgacttacattgtgaaacgga 141
||| ||||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 119/141 (84%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||||| | |||||||| ||||||||||||||||||||||||| |||
Sbjct: 18 tcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaatctagaca 77
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| ||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 78 tatatatctatctagattcattaatatcaatatgaatgtgggaaatgctagaatgactta 137
Query: 250 cattgtgaaacggaggaagta 270
|||||||| ||||||| ||||
Sbjct: 138 cattgtgatacggagggagta 158
Score = 103 bits (52), Expect = 1e-21
Identities = 117/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaat 70
Query: 73 ctaaacatat------------attcattaacatcaatatgaatatgaaaaatgctagta 120
||| |||||| ||||||||| |||||||||||| || ||||||||| |
Sbjct: 71 ctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatgctagaa 130
Query: 121 tgacttacattgtgaaacgga 141
||||||||||||||| |||||
Sbjct: 131 tgacttacattgtgatacgga 151
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||| |||||| |||||| | ||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||| ||||||| ||||||||| ||| ||||| ||||| |||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||| ||| || |||||| | ||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 119/141 (84%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||||||| |||||||| ||| ||||||||| ||||||||||| | |
Sbjct: 145 tcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaatctagaaa 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| |||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 85 tatatatctatctagattcattaacgtcaatatgaatgtgggaaatgctagaatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 2e-20
Identities = 121/147 (82%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||||||| ||||| ||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 67 atgaatctaaacatat------------attcattaacatcaatatgaatatgaaaaatg 114
||||||||| | |||| |||||||||| ||||||||||| || |||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| ||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||| ||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaat 70
Query: 73 cta 75
|||
Sbjct: 71 cta 73
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||||||||| |||||| |||| ||| ||||||||| ||||||||||||||
Sbjct: 93 attcattaccatcaatattaatgtgggaaattctaaaatgacttagattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
||||||| ||||||||| ||| |||||||| ||| ||||||| |||||||||||||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaatcta 73
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 119/141 (84%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| |||||||||| |||||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaatctagaca 77
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 78 tatatatctatttagattcattaatatcaatatgaatgtgaaaaatgctagaatgactta 137
Query: 250 cattgtgaaacggaggaagta 270
|||||| |||||||| ||||
Sbjct: 138 tattgtggaacggagggagta 158
Score = 107 bits (54), Expect = 8e-23
Identities = 122/147 (82%), Gaps = 12/147 (8%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 67 atgaatctaaacatat------------attcattaacatcaatatgaatatgaaaaatg 114
||||||||| |||||| ||||||||| |||||||||||| |||||||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| |||||||| |||||| ||||||
Sbjct: 125 ctagaatgacttatattgtggaacgga 151
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 87.7 bits (44), Expect = 8e-17
Identities = 121/149 (81%), Gaps = 12/149 (8%)
Strand = Plus / Minus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| ||||||| |||||||||||||||| ||| |||| | ||||| |||||||| |
Sbjct: 160 tgtactccctccgttccacaatataagtcattctagcatttttcacattcatattgatat 101
Query: 65 taatgaatctaaaca------------tatattcattaacatcaatatgaatatgaaaaa 112
||||||||||||| | || ||||||||||| |||||| ||| || |||
Sbjct: 100 taatgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaa 41
Query: 113 tgctagtatgacttacattgtgaaacgga 141
|||||| ||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 265 gaagtaac 272
| ||||||
Sbjct: 153 ggagtaac 160
Score = 95.6 bits (48), Expect = 3e-19
Identities = 116/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||| ||| ||| ||||||||||||||||||||| ||
Sbjct: 145 tcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctagact 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| |||||| |||| ||||||||||| | |||||||||||||| ||
Sbjct: 85 tatatatatgcctagattcattagcatctatatgaatgtggacaatgctagaatgacata 26
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 151
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||| ||||| ||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 67 atgaatctaaacatatat 84
||||||||| || |||||
Sbjct: 98 atgaatctagacttatat 81
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 119 bits (60), Expect = 2e-26
Identities = 110/127 (86%), Gaps = 6/127 (4%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatat----- 204
||||||||| ||| |||||||| ||| |||||||||| |||||||||| ||| ||
Sbjct: 131 taagtcattctagcatttcccacattcatattgatgtcaatgaatctagacagatgtcta 72
Query: 205 -attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacgga 263
||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 71 gattcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacgga 12
Query: 264 ggaagta 270
|||||||
Sbjct: 11 ggaagta 5
Score = 111 bits (56), Expect = 5e-24
Identities = 115/135 (85%), Gaps = 6/135 (4%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| || |||||||| ||| |||||||||| |||||||||| |||
Sbjct: 18 tcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatctagaca 77
Query: 202 tat------attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgt 255
| | ||||||| ||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 78 tctgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattat 137
Query: 256 gaaacggaggaagta 270
|||||||||| ||||
Sbjct: 138 gaaacggagggagta 152
Score = 99.6 bits (50), Expect = 2e-20
Identities = 118/141 (83%), Gaps = 6/141 (4%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| ||||||||| ||| ||||| ||||| |||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 67 atgaatctaaacatat------attcattaacatcaatatgaatatgaaaaatgctagta 120
||||||||| ||| || ||||||| |||||||||||||| || ||||| ||| |
Sbjct: 92 atgaatctagacagatgtctagattcattgacatcaatatgaatgtgggaaatgatagaa 33
Query: 121 tgacttacattgtgaaacgga 141
|||||||||||||||||||||
Sbjct: 32 tgacttacattgtgaaacgga 12
Score = 95.6 bits (48), Expect = 3e-19
Identities = 113/135 (83%), Gaps = 6/135 (4%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| || ||||| ||||| |||||||||| |||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaat 70
Query: 73 ctaaacatat------attcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||| |||| | ||||||| |||||||||||||| || ||||||||| |||||||
Sbjct: 71 ctagacatctgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgactt 130
Query: 127 acattgtgaaacgga 141
||||| |||||||||
Sbjct: 131 acattatgaaacgga 145
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 119 bits (60), Expect = 2e-26
Identities = 111/130 (85%), Gaps = 11/130 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| || |||||||| ||| ||||||||||||||||||||| |
Sbjct: 122 tcacaatataagtcattctaacatttcccacattcatattgatgttaatgaatctaga-- 65
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 64 ---------taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 14
Query: 262 gaggaagtaa 271
||||||||||
Sbjct: 13 gaggaagtaa 4
Score = 97.6 bits (49), Expect = 8e-20
Identities = 112/135 (82%), Gaps = 11/135 (8%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||| | |||||||||||||||| || |||||||||| |||||||
Sbjct: 75 atgaatctaga-----------taacatcaatatgaatgtggaaaatgctagaatgactt 27
Query: 127 acattgtgaaacgga 141
| |||||||||||||
Sbjct: 26 atattgtgaaacgga 12
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacggag 129
Query: 265 gaagta 270
| ||||
Sbjct: 130 ggagta 135
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || ||||| ||| |||||||| |||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacgga 128
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 117 bits (59), Expect = 9e-26
Identities = 114/130 (87%), Gaps = 3/130 (2%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| ||||| ||||||||||||||||||||| |||||| | |
Sbjct: 132 tcacaatgtaagtcattctagcatttctcatatttatattgatgttaataaatctagata 73
Query: 202 tatattcat-taacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaac 260
|| | || || |||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 72 gatct--atctatcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 261 ggaggaagta 270
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 103 bits (52), Expect = 1e-21
Identities = 113/131 (86%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgtta-atgaatctaaac 200
||||||| ||||||||||||| |||||||| ||| ||||||||| || || |||||
Sbjct: 18 tcacaatgtaagtcattttagcatttcccacattcatattgatgatagatagatctatc- 76
Query: 201 atatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaac 260
|| ||| |||||||||||||| ||| ||| |||||||||||||||||||||||||||||
Sbjct: 77 -tagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaac 135
Query: 261 ggaggaagtaa 271
||||| |||||
Sbjct: 136 ggagggagtaa 146
Score = 101 bits (51), Expect = 5e-21
Identities = 112/130 (86%), Gaps = 3/130 (2%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta-atgaa 71
|||||||||||||| ||||||||||||| ||||| ||||| ||||||||| || || |
Sbjct: 11 ctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgatagataga 70
Query: 72 tctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacatt 131
|||| || ||| |||||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 71 tctatc--tagatttattaacatcaatataaatatgagaaatgctagaatgacttacatt 128
Query: 132 gtgaaacgga 141
||||||||||
Sbjct: 129 gtgaaacgga 138
Score = 97.6 bits (49), Expect = 8e-20
Identities = 116/136 (85%), Gaps = 3/136 (2%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||||| | ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 67 atgaatctaaacatatat-tcattaacatcaatatgaatatgaaaaatgctagtatgact 125
|| |||||| | | || | || || ||||||||||||| || |||||||| ||||||
Sbjct: 85 ataaatctagatagatctatc--tatcatcaatatgaatgtgggaaatgctaaaatgact 28
Query: 126 tacattgtgaaacgga 141
||||||||||||||||
Sbjct: 27 tacattgtgaaacgga 12
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 115 bits (58), Expect = 3e-25
Identities = 112/129 (86%), Gaps = 7/129 (5%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 126 tcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctagaca 67
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
| |||||||||| |||||| || |||||||||||||||||||||| |||||||
Sbjct: 66 -agattcattaac------atgaatatgggaaatgctagaatgacttacattatgaaacg 14
Query: 262 gaggaagta 270
|||||||||
Sbjct: 13 gaggaagta 5
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 74 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 133
Query: 265 gaagta 270
| ||||
Sbjct: 134 ggagta 139
Score = 97.6 bits (49), Expect = 8e-20
Identities = 115/136 (84%), Gaps = 7/136 (5%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||||||||| ||| ||||| | ||| |||||||||||
Sbjct: 140 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 81
Query: 66 aatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgact 125
|||||||||| ||| | |||||||||| ||||||||| ||||||||| ||||||
Sbjct: 80 aatgaatctagaca-agattcattaac------atgaatatgggaaatgctagaatgact 28
Query: 126 tacattgtgaaacgga 141
|||||| |||||||||
Sbjct: 27 tacattatgaaacgga 12
Score = 93.7 bits (47), Expect = 1e-18
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 74 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 132
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 115 bits (58), Expect = 3e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 73 ctaaacatata 83
||| |||||||
Sbjct: 71 ctagacatata 81
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||||||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagaca 77
Query: 202 tata 205
||||
Sbjct: 78 tata 81
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 115 bits (58), Expect = 3e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 101 bits (51), Expect = 5e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
Score = 77.8 bits (39), Expect = 7e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 91 acatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||| |||||||||| |||||||||||| |||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacgga 122
Score = 65.9 bits (33), Expect = 3e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaat 194
||||||| ||||||||| ||| |||| ||||||| ||||||||||||||||||
Sbjct: 18 tcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat 70
Score = 56.0 bits (28), Expect = 3e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| |||| | ||| ||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat 70
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 115 bits (58), Expect = 3e-25
Identities = 112/129 (86%), Gaps = 7/129 (5%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctagaca 77
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
| |||||||||| |||||| || |||||||||||||||||||||| |||||||
Sbjct: 78 -agattcattaac------atgaatatgggaaatgctagaatgacttacattatgaaacg 130
Query: 262 gaggaagta 270
|||||||||
Sbjct: 131 gaggaagta 139
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 97.6 bits (49), Expect = 8e-20
Identities = 115/136 (84%), Gaps = 7/136 (5%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||||||||| ||| ||||| | ||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 66 aatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgact 125
|||||||||| ||| | |||||||||| ||||||||| ||||||||| ||||||
Sbjct: 64 aatgaatctagaca-agattcattaac------atgaatatgggaaatgctagaatgact 116
Query: 126 tacattgtgaaacgga 141
|||||| |||||||||
Sbjct: 117 tacattatgaaacgga 132
Score = 93.7 bits (47), Expect = 1e-18
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 115 bits (58), Expect = 3e-25
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 265 gaagta 270
||||||
Sbjct: 126 gaagta 131
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacgga 124
Score = 71.9 bits (36), Expect = 5e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| |||| | || |||||||||||||||||||||
Sbjct: 125 ctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaatgaat 66
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 231 aaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 44 aaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtattt 45
||||||| |||||||||||||| ||||||||||||| ||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 109 aaaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 44 aaaatgctaaaatgacttacattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 2e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaat 194
||||||| ||||||||| ||| |||| || |||||||||||||||||||||
Sbjct: 118 tcacaatgtaagtcattctagcatttttcacgtttatattgatgttaatgaat 66
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 115 bits (58), Expect = 3e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
||||||| ||||||||| ||| |||| ||| ||| |||||||||||||||||||||
Sbjct: 18 tcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 3e-25
Identities = 120/143 (83%), Gaps = 12/143 (8%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||| ||||||||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctagaca 77
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| ||||||| ||||||||||||||| |||||| ||||||||||||
Sbjct: 78 tatatatctatttagattcattaatatcaatatgaatgtggaaaatgttagaatgactta 137
Query: 250 cattgtgaaacggaggaagtaac 272
|||||||||||||||| ||||||
Sbjct: 138 cattgtgaaacggagggagtaac 160
Score = 99.6 bits (50), Expect = 2e-20
Identities = 121/147 (82%), Gaps = 12/147 (8%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 67 atgaatctaaacatat------------attcattaacatcaatatgaatatgaaaaatg 114
||||||||| |||||| ||||||||| |||||||||||| || ||||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 115 ctagtatgacttacattgtgaaacgga 141
||| ||||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacgga 151
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||| ||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 70 attcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 115 bits (58), Expect = 3e-25
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 62 attcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 121
Query: 265 gaagta 270
||||||
Sbjct: 122 gaagta 127
Score = 93.7 bits (47), Expect = 1e-18
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||
Sbjct: 121 ctccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaat 62
Query: 73 cta 75
|||
Sbjct: 61 cta 59
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| ||| ||||||||| |||||||| |||||||||||||
Sbjct: 62 attcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgga 120
Score = 77.8 bits (39), Expect = 7e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
||||||||||||||||| ||| ||||| || ||| |||||||||||||||||||||
Sbjct: 114 tcacaatataagtcattctagcatttctcacattcatattgatgttaatgaatcta 59
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 113 bits (57), Expect = 1e-24
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 129
Query: 265 gaagtaact 273
|||||||||
Sbjct: 130 gaagtaact 138
Score = 95.6 bits (48), Expect = 3e-19
Identities = 105/126 (83%), Gaps = 11/126 (8%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||| |||||| ||||| ||||||||| ||||||||
Sbjct: 129 ctccgtttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
| |||||| ||||||||||||| ||| ||||||||| ||||||||||| |
Sbjct: 69 c-----------tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcg 21
Query: 133 tgaaac 138
||||||
Sbjct: 20 tgaaac 15
Score = 93.7 bits (47), Expect = 1e-18
Identities = 107/129 (82%), Gaps = 11/129 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| ||| ||||| || ||| ||||||||| ||||||||||
Sbjct: 122 tcacaatataagtcattctagcatttctcacattcatattgatgctaatgaatct----- 68
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||||| ||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 67 ------cattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaaca 14
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 13 gagggagta 5
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||||||||||||| ||| ||||||||| |||||||| |||||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgga 128
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 1e-24
Identities = 119/142 (83%), Gaps = 12/142 (8%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| || |||||||| ||| |||||||| |||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaatctagaca 77
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| ||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 78 tatatatctatctagattcattaaaatcaatatgaatgtgaaaaatactagaatgactta 137
Query: 250 cattgtgaaacggaggaagtaa 271
|||||||||||||||| |||||
Sbjct: 138 cattgtgaaacggagggagtaa 159
Score = 101 bits (51), Expect = 5e-21
Identities = 122/148 (82%), Gaps = 12/148 (8%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||||||||| || ||||| ||||| |||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatt 63
Query: 66 aatgaatctaaacatatat------------tcattaacatcaatatgaatatgaaaaat 113
|||||||||| |||||||| ||||||| |||||||||||| ||||||||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaat 123
Query: 114 gctagtatgacttacattgtgaaacgga 141
|||| ||||||||||||||||||||||
Sbjct: 124 actagaatgacttacattgtgaaacgga 151
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 83.8 bits (42), Expect = 1e-15
Identities = 119/147 (80%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| |||||||| | ||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 67 atgaatctaaaca------------tatattcattaacatcaatatgaatatgaaaaatg 114
||||||||| | | || ||||||||| |||||||||||| || |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
||| ||||||||||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 111 bits (56), Expect = 5e-24
Identities = 110/129 (85%), Gaps = 8/129 (6%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| |||||| ||||| ||||| |||| |||||||
Sbjct: 132 ctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaat 73
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| ||||||| ||||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 72 ctagacatata--------catcaatatgaatgtgagaaatgctagaatgacttacattg 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 109 bits (55), Expect = 2e-23
Identities = 106/124 (85%), Gaps = 8/124 (6%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| ||||| || ||| ||||| |||| |||||||||| |||
Sbjct: 125 tcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaatctagaca 66
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 65 tata--------catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 262 gagg 265
||||
Sbjct: 13 gagg 10
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 73 attcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 132
Query: 265 g 265
|
Sbjct: 133 g 133
Score = 85.7 bits (43), Expect = 3e-16
Identities = 108/129 (83%), Gaps = 8/129 (6%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| |||||| ||||| |||||||||| ||| |
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtatatg--t 68
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| | |||||| |||| ||||||||| ||| ||||||||| |||||||||||||
Sbjct: 69 ctaga------ttcattgacataaatatgaatgtgagaaatgctagaatgacttacattg 122
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 123 tgaaacgga 131
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 111 bits (56), Expect = 5e-24
Identities = 117/139 (84%), Gaps = 10/139 (7%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| | | |||||||| ||| ||| | |||||||||||| || |||
Sbjct: 18 tcacaatataagtcattctggcatttcccacattcatactcatgttaatgaatttagaca 77
Query: 202 tatat----------tcattaacatcaatatgaatgtgaaaaatgctagaatgacttaca 251
||||| |||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 78 tatatatatctagattcattaacatgagtatgaatgtgaaaaatgctagaatgacttaca 137
Query: 252 ttgtgaaacggaggaagta 270
|||||||||||||| ||||
Sbjct: 138 ttgtgaaacggagggagta 156
Score = 95.6 bits (48), Expect = 3e-19
Identities = 115/139 (82%), Gaps = 10/139 (7%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| | | ||||| ||||| ||| | ||||||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaat 70
Query: 73 ctaaacatatat----------tcattaacatcaatatgaatatgaaaaatgctagtatg 122
|| |||||||| |||||||||| | ||||||| ||||||||||||| |||
Sbjct: 71 ttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgctagaatg 130
Query: 123 acttacattgtgaaacgga 141
|||||||||||||||||||
Sbjct: 131 acttacattgtgaaacgga 149
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||| | |||||||||| |||||| ||||||||||| ||||||||||||||
Sbjct: 70 attcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 71.9 bits (36), Expect = 5e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||||||| ||||||||| ||| |||| | ||||| ||| | ||||
Sbjct: 158 tgtactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgt 99
Query: 65 taatgaatctaaacatatat 84
||||||||||| | ||||||
Sbjct: 98 taatgaatctagatatatat 79
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 111 bits (56), Expect = 5e-24
Identities = 115/133 (86%), Gaps = 5/133 (3%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 136 tcacaatataagtcattttagcatttcccatattcatattgatgttaatgaatctagaca 77
Query: 202 tatattcattaa----catcaatatgaatgtgaaaaatgctagaatgacttacattgtga 257
||||| || | ||| || || |||||| ||||||||||| ||||||||||||||
Sbjct: 76 tatatctatctagattcattaacatcaatgtgggaaatgctagaa-gacttacattgtga 18
Query: 258 aacggaggaagta 270
||| |||||||||
Sbjct: 17 aacagaggaagta 5
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||||||||||||||||| ||||| | ||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 67 atgaatctaaacatatat 84
||||||||| ||||||||
Sbjct: 89 atgaatctagacatatat 72
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||
Sbjct: 84 attcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacggag 143
Query: 265 gaagtaa 271
| |||||
Sbjct: 144 ggagtaa 150
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 84 attcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacgga 142
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 5e-24
Identities = 118/141 (83%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||| ||||| ||||||||||||||||||||| | |
Sbjct: 18 tcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatctagata 77
Query: 202 ------------tatattcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
|||||||||||||||||||||||||| | || ||||||||||||||||
Sbjct: 78 gatatagatgtctatattcattaacatcaatatgaatgcggaatatgctagaatgactta 137
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||| ||||
Sbjct: 138 cattgtgaaacggagggagta 158
Score = 101 bits (51), Expect = 5e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagtaa 271
|||||||
Sbjct: 10 gaagtaa 4
Score = 95.6 bits (48), Expect = 3e-19
Identities = 116/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| || ||| ||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaat 70
Query: 73 ctaaaca------------tatattcattaacatcaatatgaatatgaaaaatgctagta 120
||| | | ||||||||||||||||||||||||| | || ||||||| |
Sbjct: 71 ctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatgctagaa 130
Query: 121 tgacttacattgtgaaacgga 141
|||||||||||||||||||||
Sbjct: 131 tgacttacattgtgaaacgga 151
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 111 bits (56), Expect = 5e-24
Identities = 111/129 (86%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| ||| ||||| ||||| |||||||| |||||||||||| ||
Sbjct: 18 tcacaatataagtcattctagcatttctcatatagatattgatattaatgaatcta--ca 75
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 76 tata-------acatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacg 128
Query: 262 gaggaagta 270
|||||||||
Sbjct: 129 gaggaagta 137
Score = 87.7 bits (44), Expect = 8e-17
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||| |||||| | || |||||||| |||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
|| ||||| ||||||||| |||||| |||||||||||| |||||||| ||||
Sbjct: 71 ct--acata-------taacatcaacatgaatgtgaaaaatgctaaaatgacttatattg 121
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 122 tgaaacgga 130
Score = 77.8 bits (39), Expect = 7e-14
Identities = 107/130 (82%), Gaps = 11/130 (8%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta-atgaa 71
|||||||||||||||||||||||||||| |||| | ||||| || ||||||||| |||
Sbjct: 131 ctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgttatatg-- 74
Query: 72 tctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacatt 131
|| ||||||||| |||||||| |||||| ||||||||| |||||||| |||
Sbjct: 73 --------tagattcattaatatcaatatctatatgagaaatgctagaatgacttatatt 22
Query: 132 gtgaaacgga 141
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||| |||||||| || ||| |||||||||||||||||| ||||||||||||||
Sbjct: 70 attcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacggag 11
Query: 265 g 265
|
Sbjct: 10 g 10
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 109 bits (55), Expect = 2e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagtaa 271
|||||||
Sbjct: 10 gaagtaa 4
Score = 105 bits (53), Expect = 3e-22
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||| ||||||||||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatct----- 72
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 73 ----tttattaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacg 128
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 129 gagggagta 137
Score = 89.7 bits (45), Expect = 2e-17
Identities = 107/129 (82%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
|| || |||||||||||||||||| || ||||||||| ||||||||| |||
Sbjct: 71 ct---------tttattaacatcaatatgaatgtgggaaatgctagaatgacttactttg 121
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 122 tgaaacgga 130
Score = 89.7 bits (45), Expect = 2e-17
Identities = 113/137 (82%), Gaps = 9/137 (6%)
Strand = Plus / Minus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| ||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||
Sbjct: 139 tgtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgt 80
Query: 65 taatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgac 124
|||| || | |||||||| ||||||||||||| || ||||||||| |||||
Sbjct: 79 taataaa---------agattcattaccatcaatatgaatgtgggaaatgctagaatgac 29
Query: 125 ttacattgtgaaacgga 141
|||||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 109 bits (55), Expect = 2e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||
Sbjct: 65 attcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacggag 124
Query: 265 gaagtaa 271
|||||||
Sbjct: 125 gaagtaa 131
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||
Sbjct: 65 attcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacgga 123
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||||||| |||| | || | ||||||||||||||||||
Sbjct: 124 ctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaatgaat 65
Query: 73 cta 75
|||
Sbjct: 64 cta 62
Score = 67.9 bits (34), Expect = 7e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatat 58
||||||| |||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 3 tgtactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 48.1 bits (24), Expect = 7e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||| |||||| |||| ||| ||||||||||||||| ||||||||| ||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
Score = 48.1 bits (24), Expect = 7e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
||||||| ||||||||||||| |||| || | |||||||||||||||||||||
Sbjct: 117 tcacaatgtaagtcattttagcatttttcacgtacatattgatgttaatgaatcta 62
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 109 bits (55), Expect = 2e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 93 attcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 152
Query: 265 gaagtaa 271
| |||||
Sbjct: 153 ggagtaa 159
Score = 107 bits (54), Expect = 8e-23
Identities = 122/147 (82%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||||| ||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 67 atgaatctaaacatat------------attcattaacatcaatatgaatatgaaaaatg 114
||||||||| |||||| ||||||||||||| ||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| ||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 95.6 bits (48), Expect = 3e-19
Identities = 116/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| ||||| || ||| ||||| ||||||||||||||| |||
Sbjct: 145 tcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaatctagaca 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| ||||||||||| |||||||| || |||||||||||||||||
Sbjct: 85 tatatatccaactagattcattaacatccatatgaatatgggtaatgctagaatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||
Sbjct: 93 attcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 109 bits (55), Expect = 2e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 65 attcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacggag 124
Query: 265 gaagtaa 271
|||||||
Sbjct: 125 gaagtaa 131
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||
Sbjct: 65 attcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacgga 123
Score = 71.9 bits (36), Expect = 5e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||| |||| ||||||||||||||||||| ||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| |||| | || | |||||||||||||||||||
Sbjct: 124 ctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatgaat 65
Query: 73 cta 75
|||
Sbjct: 64 cta 62
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 97 atatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||| |||| |||| |||||||||||||| |||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacgga 12
Score = 48.1 bits (24), Expect = 7e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
||||||| ||||||||| ||| |||| || | ||||||||||||||||||||||
Sbjct: 117 tcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatgaatcta 62
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 109 bits (55), Expect = 2e-23
Identities = 107/125 (85%), Gaps = 7/125 (5%)
Strand = Plus / Minus
Query: 146 aatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatata 205
||||||||||||| || |||| ||| ||| ||||||||||||||||||||| |||||||
Sbjct: 122 aatataagtcattctaacattttccacattcatattgatgttaatgaatctagacatata 63
Query: 206 ttcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagg 265
||||||| || |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 62 -------acatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagg 10
Query: 266 aagta 270
||||
Sbjct: 9 gagta 5
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| |||||| |||||||||||| ||| ||||||||||
Sbjct: 74 attcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaacggag 133
Query: 265 gaagta 270
||||||
Sbjct: 134 gaagta 139
Score = 93.7 bits (47), Expect = 1e-18
Identities = 108/129 (83%), Gaps = 7/129 (5%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||||||||||||| || |||| ||||| ||||||||||||||||||
Sbjct: 133 ctccgtttcataatataagtcattctaacattttccacattcatattgatgttaatgaat 74
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| ||||| ||||||||| || ||| ||||||||||||| ||||||||||||
Sbjct: 73 ctagacata-------taacatcaacataaatgtgaaaaatgctagaatgacttacatta 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || |||||| ||| |||||||| ||| |||||||||
Sbjct: 74 attcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaacgga 132
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 107 bits (54), Expect = 8e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 214 catcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||| |||||||| ||| ||||||||||||| ||||||||||| ||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
Score = 67.9 bits (34), Expect = 7e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 92 catcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| ||| |||||||||||| |||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacgga 129
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 107 bits (54), Expect = 8e-23
Identities = 113/131 (86%), Gaps = 5/131 (3%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcat-tttagtatttcccatatttatattgatgttaatgaatctaaac 200
||||||| |||||||| ||||| |||||||| ||| ||||||||| ||||| || |
Sbjct: 130 tcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatgtat----ag 75
Query: 201 atatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaac 260
|| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 261 ggaggaagtaa 271
|||||||||||
Sbjct: 14 ggaggaagtaa 4
Score = 105 bits (53), Expect = 3e-22
Identities = 112/130 (86%), Gaps = 5/130 (3%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||||||| |||||||| ||| ||||||||| |||||||||| |
Sbjct: 18 tcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatct----a 73
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctaga-atgacttacattgtgaaac 260
||| ||||| |||||||||||||||| |||||||| | |||||||||||||||||||
Sbjct: 74 gctatacattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaac 133
Query: 261 ggaggaagta 270
||||| ||||
Sbjct: 134 ggagggagta 143
Score = 89.7 bits (45), Expect = 2e-17
Identities = 110/130 (84%), Gaps = 5/130 (3%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||||||| ||||| ||||| ||||||||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgct-agtatgacttacatt 131
|| | ||| ||||| ||||||||||||| || ||||||| | ||||||||||||
Sbjct: 71 ct----agctatacattagcatcaatatgaatgtgggaaatgctaaacatgacttacatt 126
Query: 132 gtgaaacgga 141
||||||||||
Sbjct: 127 gtgaaacgga 136
Score = 85.7 bits (43), Expect = 3e-16
Identities = 114/136 (83%), Gaps = 5/136 (3%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcat-tttagtatttcttacatttatattgatgtt 65
||||| |||||||||||||| |||||||| ||||| ||||| ||||| ||||||||| |
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 84
Query: 66 aatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgact 125
|||| || | || |||||||| ||||||||||||| || |||||||| ||||||
Sbjct: 83 aatgtat----agctagattcattagcatcaatatgaatgtgggaaatgctaaaatgact 28
Query: 126 tacattgtgaaacgga 141
||||||||||||||||
Sbjct: 27 tacattgtgaaacgga 12
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 107 bits (54), Expect = 8e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 201 atatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaac 260
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 57 atatattcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaac 116
Query: 261 ggaggaagta 270
||||||||||
Sbjct: 117 ggaggaagta 126
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 79 atatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaac 138
||||||||||||| |||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 57 atatattcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaac 116
Query: 139 gga 141
|||
Sbjct: 117 gga 119
Score = 71.9 bits (36), Expect = 5e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| |||||||| |||||||||
Sbjct: 120 ctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatattaatgaat 61
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttc 46
|||||| |||||||||||||| ||||||||| ||| |||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 107 bits (54), Expect = 8e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 107/129 (82%), Gaps = 11/129 (8%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| |||||||||| |||||||||| |||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctagaca 77
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 78 -----------acatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacg 126
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 127 gagggagta 135
Score = 77.8 bits (39), Expect = 7e-14
Identities = 105/129 (81%), Gaps = 11/129 (8%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| |||||||||| |||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| || ||||||||||||||| || ||||||||| ||||||||||||
Sbjct: 71 ctagac-----------aacatcaatatgaatgtgggaaatgctagaatgacttacatta 119
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 120 tgaaacgga 128
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||| |||||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 70 attcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 107 bits (54), Expect = 8e-23
Identities = 111/131 (84%), Gaps = 8/131 (6%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||| ||||||||| |
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatcga---- 73
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||||||| |||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 74 ----ttcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacg 129
Query: 262 gaggaagtaac 272
|||| ||||||
Sbjct: 130 gagggagtaac 140
Score = 103 bits (52), Expect = 1e-21
Identities = 103/121 (85%), Gaps = 8/121 (6%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatattca 209
||||||||| ||| |||||||| ||| ||||||||| ||||||||| | ||||
Sbjct: 117 taagtcattctagcatttcccacattcatattgatgctaatgaatcga--------ttca 66
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagt 269
||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 65 ttagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 270 a 270
|
Sbjct: 5 a 5
Score = 91.7 bits (46), Expect = 5e-18
Identities = 112/135 (82%), Gaps = 8/135 (5%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||| |||||||| ||||||||||||| || ||||||||| |||||||
Sbjct: 65 atgaatc--------gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 116
Query: 127 acattgtgaaacgga 141
||||| |||||||||
Sbjct: 117 acattatgaaacgga 131
Score = 91.7 bits (46), Expect = 5e-18
Identities = 112/135 (82%), Gaps = 8/135 (5%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| ||||||||| ||| ||||| ||||| ||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||| | ||||||| ||||||||||||| || ||||||||| |||||||
Sbjct: 78 atgaatcga--------ttcattagcatcaatatgaatgtgggaaatgctagaatgactt 27
Query: 127 acattgtgaaacgga 141
|||||||||||||||
Sbjct: 26 acattgtgaaacgga 12
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 8e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 103 bits (52), Expect = 1e-21
Identities = 117/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||||||||||||||||||| |||
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagaca 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| | ||||| || |||||||||||| ||||||||| |||||||||
Sbjct: 85 tatatatttagctaaatttattaatataaatatgaatgtggaaaatgctataatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||| ||||
Sbjct: 25 cattgtgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 5e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 67 atgaatctaaacatatat 84
||||||||| ||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 107 bits (54), Expect = 8e-23
Identities = 64/66 (96%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtgaaaa-tgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 77.8 bits (39), Expect = 7e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||||| || |||||| |||||| ||||||||||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtgaaaa-tgctagaatgacttacattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 1e-12
Identities = 44/45 (97%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 221 atgaatgtgaaaaatgctagaatgacttacattgtgaaacggagg 265
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 64 atgaatgtgaaaa-tgctagaatgacttacattgtgaaacggagg 107
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 109 aaaatgctagtatgacttacattgtgaaacgga 141
|||||||||| ||||||||||||||||||||||
Sbjct: 73 aaaatgctagaatgacttacattgtgaaacgga 105
Score = 56.0 bits (28), Expect = 3e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| |||| | |||| ||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgttaatgaat 69
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 107 bits (54), Expect = 8e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 265 gaagta 270
||||||
Sbjct: 109 gaagta 114
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| |||||| ||||||||||||||||||
Sbjct: 108 ctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatgaat 49
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacgga 107
Score = 75.8 bits (38), Expect = 3e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 221 atgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaat 194
||||||| ||||||||| ||| |||||| | ||| ||||||||||||||||||
Sbjct: 101 tcacaatgtaagtcattctagcatttcctacattcatattgatgttaatgaat 49
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttc 46
|||||| |||||||||||||| ||||||||| ||| |||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 107 bits (54), Expect = 8e-23
Identities = 113/131 (86%), Gaps = 5/131 (3%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcat-tttagtatttcccatatttatattgatgttaatgaatctaaac 200
||||||| |||||||| ||||| |||||||| ||| ||||||||| ||||| || |
Sbjct: 18 tcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatgtat----ag 73
Query: 201 atatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaac 260
|| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 261 ggaggaagtaa 271
|||||||||||
Sbjct: 134 ggaggaagtaa 144
Score = 105 bits (53), Expect = 3e-22
Identities = 112/130 (86%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||||||| |||||||| ||| ||||||||| ||||||||||| |
Sbjct: 130 tcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctagcta 71
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctaga-atgacttacattgtgaaac 260
|| ||||| |||||||||||||||| |||||||| | |||||||||||||||||||
Sbjct: 70 ta----cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaac 15
Query: 261 ggaggaagta 270
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 89.7 bits (45), Expect = 2e-17
Identities = 110/130 (84%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||||||| ||||| ||||| ||||||||| ||||||||
Sbjct: 137 ctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaat 78
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgct-agtatgacttacatt 131
|| | ||| ||||| ||||||||||||| || ||||||| | ||||||||||||
Sbjct: 77 ct----agctatacattagcatcaatatgaatgtgggaaatgctaaacatgacttacatt 22
Query: 132 gtgaaacgga 141
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 85.7 bits (43), Expect = 3e-16
Identities = 114/136 (83%), Gaps = 5/136 (3%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcat-tttagtatttcttacatttatattgatgtt 65
||||| |||||||||||||| |||||||| ||||| ||||| ||||| ||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 64
Query: 66 aatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgact 125
|||| || | || |||||||| ||||||||||||| || |||||||| ||||||
Sbjct: 65 aatgtat----agctagattcattagcatcaatatgaatgtgggaaatgctaaaatgact 120
Query: 126 tacattgtgaaacgga 141
||||||||||||||||
Sbjct: 121 tacattgtgaaacgga 136
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 107 bits (54), Expect = 8e-23
Identities = 108/129 (83%), Gaps = 14/129 (10%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| ||| || ||||| ||| |||||||||||||||||||||||||
Sbjct: 119 tcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatctaaaca 60
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 59 t--------------caatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 13 gagggagta 5
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacggag 126
Query: 265 gaagta 270
||||||
Sbjct: 127 gaagta 132
Score = 91.7 bits (46), Expect = 5e-18
Identities = 106/129 (82%), Gaps = 14/129 (10%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||| || || ||||| ||||||||||||||||||
Sbjct: 126 ctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaat 67
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
|||| |||||||||||||| || |||||||||| |||||||||||||
Sbjct: 66 ctaa--------------acatcaatatgaatgtggaaaatgctagaatgacttacattg 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || | ||||||| |||||||| |||||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacgga 125
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 107 bits (54), Expect = 8e-23
Identities = 57/58 (98%)
Strand = Plus / Minus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 207 tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagga 266
||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggg 148
Query: 267 agta 270
||||
Sbjct: 149 agta 152
Score = 81.8 bits (41), Expect = 5e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 85 tcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||| || |||| ||||| ||||||||||||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacgga 145
Score = 77.8 bits (39), Expect = 7e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 91 acatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 107 bits (54), Expect = 8e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 87.7 bits (44), Expect = 8e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| ||||||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgttaatgaat 70
Query: 73 ctaaacatatat 84
||| ||| ||||
Sbjct: 71 ctagacaaatat 82
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| ||| |||| |||| |||||||||||| |||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacgga 12
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 218 aatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatat 206
||||||||| ||||||||| || ||| ||||||||||||||||||||| ||| ||||
Sbjct: 26 taagtcattctagtatttctcacattcatattgatgttaatgaatctagacaaatat 82
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 107 bits (54), Expect = 8e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 69 attcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 128
Query: 265 gaagta 270
||||||
Sbjct: 129 gaagta 134
Score = 87.7 bits (44), Expect = 8e-17
Identities = 102/122 (83%), Gaps = 12/122 (9%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||| || |
Sbjct: 121 tcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaatc--aaga 64
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|| |||||||||||||||| ||||||| | |||||||||||||||||||||
Sbjct: 63 ta----------catcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacg 14
Query: 262 ga 263
||
Sbjct: 13 ga 12
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 128 ctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaat 69
Query: 73 c 73
|
Sbjct: 68 c 68
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 69 attcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 107 bits (54), Expect = 8e-23
Identities = 57/58 (98%)
Strand = Plus / Minus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 7e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 91 acatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||| ||| ||||||||| ||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
|||||||||||||| ||||||||| ||| |||||| ||||| ||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 234 atgctagaatgacttacattgtgaaacggaggaagta 270
|||||||| ||||||||||||||||||||||| ||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagta 111
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 107 bits (54), Expect = 8e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacggag 124
Query: 265 gaagta 270
||||||
Sbjct: 125 gaagta 130
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| ||||||||| ||| ||| |||||||| |||||||||
Sbjct: 65 attcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacgga 123
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagtaa 271
||||||||||| |||||||||||||||||| ||||||||||||||| |||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtaa 4
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttc 46
||||| |||||||||||||||||||||||| ||| |||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttc 44
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| |||| |||| || |||| | ||||| ||||||||||||||||||
Sbjct: 124 ctccgtttcataatgtaagccattctatcatttttcacattcatattgatgttaatgaat 65
Query: 73 cta 75
|||
Sbjct: 64 cta 62
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 97 atatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| || ||||||||| |||||||| |||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 105 bits (53), Expect = 3e-22
Identities = 118/141 (83%), Gaps = 14/141 (9%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| || |||||||||||| ||||||||||||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctagaca 77
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| | |||||||||||||| ||||||||| |||||||||||||||
Sbjct: 78 tatatatctatatagatttattaacatcaatataaatgtgaaa--tgctagaatgactta 135
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||| ||||
Sbjct: 136 cattgtgaaacggagggagta 156
Score = 93.7 bits (47), Expect = 1e-18
Identities = 121/147 (82%), Gaps = 14/147 (9%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99
Query: 67 atgaatctaaacatatat------------tcattaacatcaatatgaatatgaaaaatg 114
|| |||||| | | |||| ||||||||||||||||||||||| |||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
|| | ||||||||||||||||||||||
Sbjct: 38 cttgaatgacttacattgtgaaacgga 12
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 77.8 bits (39), Expect = 7e-14
Identities = 119/147 (80%), Gaps = 14/147 (9%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| || ||||| | ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 67 atgaatctaaacatat------------attcattaacatcaatatgaatatgaaaaatg 114
||||||||| |||||| ||| |||||||||||||| ||| || |||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 122
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| ||||||||||||||||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacgga 149
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 3e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 93 attcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 152
Query: 265 g 265
|
Sbjct: 153 g 153
Score = 87.7 bits (44), Expect = 8e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| |||||| ||||| |||||||||| |||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaat 93
Query: 73 ctaaacatatat 84
||| ||||||||
Sbjct: 92 ctagacatatat 81
Score = 85.7 bits (43), Expect = 3e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 216 tcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagg 265
||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacattgtgaaacggagg 10
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||| |||||||||||||| ||| ||||||||| ||||||||||||||||||||||
Sbjct: 93 attcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 105 bits (53), Expect = 3e-22
Identities = 118/141 (83%), Gaps = 14/141 (9%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| || |||||||||||| ||||||||||||||||||||| |||
Sbjct: 143 tcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctagaca 84
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| | |||||||||||||| ||||||||| |||||||||||||||
Sbjct: 83 tatatatctatatagatttattaacatcaatataaatgtgaaa--tgctagaatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||| ||||
Sbjct: 25 cattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 121/147 (82%), Gaps = 14/147 (9%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62
Query: 67 atgaatctaaacatatat------------tcattaacatcaatatgaatatgaaaaatg 114
|| |||||| | | |||| ||||||||||||||||||||||| |||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 115 ctagtatgacttacattgtgaaacgga 141
|| | ||||||||||||||||||||||
Sbjct: 123 cttgaatgacttacattgtgaaacgga 149
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||
Sbjct: 91 attcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggag 150
Query: 265 gaagta 270
| ||||
Sbjct: 151 ggagta 156
Score = 77.8 bits (39), Expect = 7e-14
Identities = 119/147 (80%), Gaps = 14/147 (9%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| || ||||| | ||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 67 atgaatctaaacatat------------attcattaacatcaatatgaatatgaaaaatg 114
||||||||| |||||| ||| |||||||||||||| ||| || |||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| ||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 105 bits (53), Expect = 3e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 206 ttcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagg 265
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 266 aagta 270
|||||
Sbjct: 9 aagta 5
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 84 ttcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacgga 12
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaa 71
|||||||||||||| |||||||| ||| ||||| ||||| |||||||||||||||||
Sbjct: 11 ctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaa 193
||||||| |||||||| ||| |||||||| ||| |||||||||||||||||
Sbjct: 18 tcacaatgcaagtcattctagcatttcccacattcatattgatgttaatgaa 69
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 117/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| ||| |||||||| ||| |||||||| |||||||||||| | |
Sbjct: 145 tcacaatataagtcattctagcatttcccacattcatattgatattaatgaatctagata 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| |||||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 85 tatatatttatctagattcattaacattaatatgaatgtggaaaaagttagaatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
||||||||||||||||||||
Sbjct: 25 tattgtgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 87.7 bits (44), Expect = 8e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||||||||||||||||| ||| ||||| ||||| |||||||| |
Sbjct: 160 tgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatat 101
Query: 65 taatgaatctaaacatatat 84
||||||||||| | ||||||
Sbjct: 100 taatgaatctagatatatat 81
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| |||||||||||| || ||||||||| |||||||| |||||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 151
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 207 tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagga 266
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 267 agta 270
||||
Sbjct: 8 agta 5
Score = 99.6 bits (50), Expect = 2e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 152
Score = 85.7 bits (43), Expect = 3e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 91 acatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 145
Score = 81.8 bits (41), Expect = 5e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 85 tcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||| |||||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 1e-21
Identities = 116/139 (83%), Gaps = 10/139 (7%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||||||| |||||||| ||| || | |||||||||||||| | |||
Sbjct: 18 tcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaatcaagaca 77
Query: 202 tatat----------tcattaacatcaatatgaatgtgaaaaatgctagaatgacttaca 251
||||| ||||||||||| ||||||||||||||||||||| |||||||| ||
Sbjct: 78 tatatatgcatagattcattaacatctatatgaatgtgaaaaatgctaaaatgacttgca 137
Query: 252 ttgtgaaacggaggaagta 270
|| ||||||||||| ||||
Sbjct: 138 ttatgaaacggagggagta 156
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 70 attcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 87.7 bits (44), Expect = 8e-17
Identities = 114/139 (82%), Gaps = 10/139 (7%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||||||| ||||| ||||| || | |||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaat 70
Query: 73 ctaaacatat----------attcattaacatcaatatgaatatgaaaaatgctagtatg 122
| | |||||| ||||||||||||| |||||||| |||||||||||| |||
Sbjct: 71 caagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatgctaaaatg 130
Query: 123 acttacattgtgaaacgga 141
|||| |||| |||||||||
Sbjct: 131 acttgcattatgaaacgga 149
Score = 77.8 bits (39), Expect = 7e-14
Identities = 118/146 (80%), Gaps = 10/146 (6%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||| ||| |||||||||||| |||| | ||||| |||| ||||||
Sbjct: 157 gtactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtt 98
Query: 66 aatgaatctaaacatat----------attcattaacatcaatatgaatatgaaaaatgc 115
|||||||||| ||||| ||||||||||||| | |||||| || ||||||
Sbjct: 97 aatgaatctatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgc 38
Query: 116 tagtatgacttacattgtgaaacgga 141
|| ||||||||||||||||||||||
Sbjct: 37 taaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 207 tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagga 266
||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 267 agta 270
||||
Sbjct: 8 agta 5
Score = 81.8 bits (41), Expect = 5e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 85 tcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgga 12
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 211 taacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||| ||||||||| ||| | ||||||||||||||||||| ||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||||||||||||| |||| ||||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtt 63
Query: 66 aatga 70
|||||
Sbjct: 64 aatga 68
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatga 192
||||||| ||||||||||||| |||| ||| ||| ||||||||||||||||
Sbjct: 18 tcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
Score = 58.0 bits (29), Expect = 7e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 89 taacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||| || ||||||||| || | |||||||||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacgga 121
Score = 50.1 bits (25), Expect = 2e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||| | ||||||| |||| ||||| |||||||||||
Sbjct: 129 gtactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtt 70
Query: 66 a 66
|
Sbjct: 69 a 69
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 103 bits (52), Expect = 1e-21
Identities = 108/129 (83%), Gaps = 12/129 (9%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||
Sbjct: 117 tcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta---- 62
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|||||||||||||||||||| ||||||||| ||||||||| ||||||||||
Sbjct: 61 --------ttaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaaca 10
Query: 262 gaggaagta 270
|||||||||
Sbjct: 9 gaggaagta 1
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 65 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 124
Query: 265 gaagta 270
| ||||
Sbjct: 125 ggagta 130
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaac 138
|||||||||||||||||||||| || ||||||||| |||||||||||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Score = 77.8 bits (39), Expect = 7e-14
Identities = 107/132 (81%), Gaps = 12/132 (9%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| ||| |||||||||| ||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
|||||||| |||||||||||||||||| || ||||||||| |||||||
Sbjct: 70 atgaatct------------attaacatcaatatgaatgtggaaaatgctataatgactt 23
Query: 127 acattgtgaaac 138
| ||||||||||
Sbjct: 22 atattgtgaaac 11
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 117/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||||||| |||||||| ||| ||||| ||||||||||||||| | |
Sbjct: 145 tcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatctagata 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
|||| ||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 85 gatatatatgtctagattcattaacatcaatatgaatgtgggtaatgctataatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||| ||||
Sbjct: 25 cattgtgaaacggagggagta 5
Score = 103 bits (52), Expect = 1e-21
Identities = 117/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| ||| |||| ||| ||||||||||||||||||||| |||
Sbjct: 18 tcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaatctagaca 77
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| |||||||||| |||||||||||| |||||||| |||||||||
Sbjct: 78 tatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaaatgactta 137
Query: 250 cattgtgaaacggaggaagta 270
||||||||||||||||||||
Sbjct: 138 tattgtgaaacggaggaagta 158
Score = 87.7 bits (44), Expect = 8e-17
Identities = 115/141 (81%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 152 ctccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaat 93
Query: 73 ctaaaca------------tatattcattaacatcaatatgaatatgaaaaatgctagta 120
||| | | || |||||||||||||||||||||| || ||||||| |
Sbjct: 92 ctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgctataa 33
Query: 121 tgacttacattgtgaaacgga 141
|||||||||||||||||||||
Sbjct: 32 tgacttacattgtgaaacgga 12
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||| | ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 67 atgaatctaaacatatat 84
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 207 tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagga 266
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 267 agta 270
||||
Sbjct: 127 agta 130
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagt 269
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 270 a 270
|
Sbjct: 5 a 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 85 tcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||| |||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 123
Score = 67.9 bits (34), Expect = 7e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 88 ttaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||||||| ||||||||| ||| ||||| ||||| |||| |||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgt 62
Query: 65 taa 67
|||
Sbjct: 63 taa 65
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatga 70
|||||||||||||| ||||||||| ||| ||||| ||||| |||| |||||||||||
Sbjct: 124 ctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatga 67
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 111/133 (83%), Gaps = 12/133 (9%)
Strand = Plus / Plus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatatt-- 207
||||||||||| | |||||||| ||||||||||||||| ||||||||| |||||||||
Sbjct: 26 taagtcatttttgcatttcccacatttatattgatgtttatgaatctagacatatatttc 85
Query: 208 ----------cattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtga 257
||||||||||||||| |||||| |||||||| |||||||||| ||||||
Sbjct: 86 tatctagattcattaacatcaatataaatgtgggaaatgctaaaatgacttactttgtga 145
Query: 258 aacggaggaagta 270
|||||||||||||
Sbjct: 146 aacggaggaagta 158
Score = 85.7 bits (43), Expect = 3e-16
Identities = 110/133 (82%), Gaps = 12/133 (9%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatct------aaacata 203
||||||||||||| |||||||| |||||||||||||||||||||||| ||| |||
Sbjct: 137 taagtcattttagcatttcccacatttatattgatgttaatgaatctagatagaaatata 78
Query: 204 t------attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtga 257
| |||||| ||||||||||| |||||| |||||| | |||||||||| ||||||
Sbjct: 77 tgtctagattcataaacatcaatataaatgtgggaaatgcaaaaatgacttactttgtga 18
Query: 258 aacggaggaagta 270
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 85.7 bits (43), Expect = 3e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| ||||||||||||| ||||||||||| | ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 67 atgaatctaaacatatatt 85
||||||||| |||||||||
Sbjct: 65 atgaatctagacatatatt 83
Score = 85.7 bits (43), Expect = 3e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 152 ctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaat 93
Query: 73 cta 75
|||
Sbjct: 92 cta 90
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 101 bits (51), Expect = 5e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 208 cattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaa 267
|||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaa 126
Query: 268 gta 270
|||
Sbjct: 127 gta 129
Score = 71.9 bits (36), Expect = 5e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| ||||||||| ||| ||||| ||||| ||||||||||||||| ||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttaatggat 64
Query: 73 ctaaacatatat 84
||| ||||||||
Sbjct: 63 ctagacatatat 52
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 86 cattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||||| || ||||||||| |||||||||||| |||||||||
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 122
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatat 206
||||||||| ||| |||||||| ||| ||||||||||||||| ||||| ||||||||
Sbjct: 108 taagtcattctagcatttcccacattcatattgatgttaatggatctagacatatat 52
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 101 bits (51), Expect = 5e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacgga 263
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatggtagaatgacttacattgtgaaacgga 12
Score = 91.7 bits (46), Expect = 5e-18
Identities = 120/147 (81%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||| || ||| || ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 67 atgaatctaaacatatat------------tcattaacatcaatatgaatatgaaaaatg 114
||||||||| |||||||| |||||||||||||||||||| ||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
||| ||||||||||||||||||||||
Sbjct: 38 gtagaatgacttacattgtgaaacgga 12
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||| ||||| |||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 93 attcattaatatcaacatgaatttagaaaatgctagaatgacttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 77.8 bits (39), Expect = 7e-14
Identities = 113/140 (80%), Gaps = 12/140 (8%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaatc 73
||||||||||||| ||||||||| || |||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 74 taaaca------------tatattcattaacatcaatatgaatatgaaaaatgctagtat 121
|| | | || ||||||||| ||||| |||||| | |||||||||| ||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 122 gacttacattgtgaaacgga 141
||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacgga 151
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 5e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 93 attcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 265 gaagtaa 271
| |||||
Sbjct: 153 ggagtaa 159
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||| | |||||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 93 attcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 151
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacgga 263
||||||||||| | ||||||||||| ||||| |||||||||||||||| || ||||||
Sbjct: 70 attcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 12
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||| ||||| |||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
Score = 50.1 bits (25), Expect = 2e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||| ||| ||| |||| | |||||||||||||| |||
Sbjct: 145 tcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatctagaca 86
Query: 202 t 202
|
Sbjct: 85 t 85
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||| | |||||||| || ||||| ||| |||||||||||| || ||||||
Sbjct: 70 attcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 12
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 101 bits (51), Expect = 5e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 212 aacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 95.6 bits (48), Expect = 3e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 211 taacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 87.7 bits (44), Expect = 8e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 90 aacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 124
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 89 taacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||| || |||||||||| || |||||||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 101 bits (51), Expect = 5e-21
Identities = 106/122 (86%), Gaps = 3/122 (2%)
Strand = Plus / Plus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatattca 209
||||||||| ||| ||||| |||||| ||||||||||||||||||||| |||||||| |
Sbjct: 26 taagtcattctagcatttctcatattcatattgatgttaatgaatctagacatatat--a 83
Query: 210 t-taacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
| || | | |||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 84 tctatctagattatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaag 143
Query: 269 ta 270
||
Sbjct: 144 ta 145
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||
Sbjct: 70 attcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 12
Score = 87.7 bits (44), Expect = 8e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||| ||| ||||||||| ||| |||||| | ||| ||||||||||
Sbjct: 3 tgtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgt 62
Query: 65 taatgaatctaaacatatat 84
||||||||||| ||||||||
Sbjct: 63 taatgaatctagacatatat 82
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 101 bits (51), Expect = 5e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 269 taa 271
|||
Sbjct: 6 taa 4
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| |||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 11 ctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgttaataaat 70
Query: 73 ctaaacata 81
|| |||||
Sbjct: 71 ttatacata 79
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 87 attaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||| || ||||| ||| ||||||||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacgga 12
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| |||||||||||||||||| ||| ||| |||||||||||||| ||| || |||
Sbjct: 18 tcacaatgtaagtcattttagtattttccacattcatattgatgttaataaatttataca 77
Query: 202 ta 203
||
Sbjct: 78 ta 79
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 101 bits (51), Expect = 5e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 208 cattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaa 267
||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 268 gta 270
|||
Sbjct: 7 gta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatg 69
|||||||||||||| ||||||||| ||| |||||| ||||||||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgttaatg 67
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 86 cattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||| ||| ||| ||||||||| ||||||||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 233 aatgctagaatgacttacattgtgaaacgga 263
|||||||||||||||||||||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacgga 94
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 aatgctagtatgacttacattgtgaaacgga 141
|||||||| ||||||||||||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacgga 94
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 101 bits (51), Expect = 5e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggag 124
Query: 265 gaagtaa 271
|||||||
Sbjct: 125 gaagtaa 131
Score = 93.7 bits (47), Expect = 1e-18
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 124 ctccgtttcacaatataagtcattttagtattttccacattcatattgatgttaatgaat 65
Query: 73 cta 75
|||
Sbjct: 64 cta 62
Score = 87.7 bits (44), Expect = 8e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
|||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 117 tcacaatataagtcattttagtattttccacattcatattgatgttaatgaatcta 62
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || ||||| ||| |||||||| |||||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacgga 123
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||| |||||||||||||| ||||||||||| |||||| ||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 101 bits (51), Expect = 5e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 71 attcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 130
Query: 265 gaagtaa 271
| |||||
Sbjct: 131 ggagtaa 137
Score = 91.7 bits (46), Expect = 5e-18
Identities = 107/129 (82%), Gaps = 10/129 (7%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| || |||||||| ||| ||||||||||||||||||||| | |
Sbjct: 123 tcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagata 64
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|||| |||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 63 gatat----------caatatgaatatgggaaatgctagaatgacttacattgtgaaacg 14
Query: 262 gaggaagta 270
|||||||||
Sbjct: 13 gaggaagta 5
Score = 87.7 bits (44), Expect = 8e-17
Identities = 111/135 (82%), Gaps = 10/135 (7%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| || ||||| ||||| ||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||| | | |||| ||||||||||||| ||||||||| |||||||
Sbjct: 76 atgaatctagatagatat----------caatatgaatatgggaaatgctagaatgactt 27
Query: 127 acattgtgaaacgga 141
|||||||||||||||
Sbjct: 26 acattgtgaaacgga 12
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || ||||| ||| ||||||||||||||||||||||
Sbjct: 71 attcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacgga 129
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| |||| |||||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 151
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||| |||||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 70 attcattagcatctatatgaatatagaaaatgttagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 75.8 bits (38), Expect = 3e-13
Identities = 118/147 (80%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||| ||||| |||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 67 atgaatctaaacatatat------------tcattaacatcaatatgaatatgaaaaatg 114
|||||| ||||||||||| |||||| |||| |||||||||| ||||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
||| ||||||||||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 70 attcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacgga 263
|||||||| |||||||||||||||| ||||| | |||||||||||||| |||||||||
Sbjct: 93 attcattaccatcaatatgaatgtgggaaatggtggaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 99.6 bits (50), Expect = 2e-20
Identities = 102/121 (84%), Gaps = 10/121 (8%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatattca 209
||||||||| |||||||||||||||| ||||||||| ||||||||||| ||
Sbjct: 115 taagtcattctagtatttcccatattcatattgatgctaatgaatctagac--------- 65
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagt 269
|| ||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||||
Sbjct: 64 -tagcatcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagt 6
Query: 270 a 270
|
Sbjct: 5 a 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 110/135 (81%), Gaps = 10/135 (7%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| ||||||||| ||||||||| | ||| ||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||| || || ||||||||||||||||| |||| |||| || ||||
Sbjct: 76 atgaatctagac----------tagcatcaatatgaatatgagaaatactagaattactt 27
Query: 127 acattgtgaaacgga 141
|||||||||||||||
Sbjct: 26 acattgtgaaacgga 12
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||||||||||||| || |||| ||||||||||||||||| ||||||||||
Sbjct: 71 attcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaacggag 130
Query: 265 gaagta 270
| ||||
Sbjct: 131 ggagta 136
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||||||||||| |||| |||| |||||||||||| |||||||||
Sbjct: 71 attcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaacgga 129
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
||||||| ||||||||| ||| |||||||| ||| |||| ||||||||||||||||
Sbjct: 18 tcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaatcta 73
Score = 58.0 bits (29), Expect = 7e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 97 atatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 117
Score = 48.1 bits (24), Expect = 7e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttc 46
||||| |||||||||||||| ||||||||| ||| |||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttc 85
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 92 attcattaacatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacggag 151
Query: 265 gaagta 270
| ||||
Sbjct: 152 ggagta 157
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| || ||||| ||||| ||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 67 atgaatctaaacatatat 84
||||||||| ||||||||
Sbjct: 97 atgaatctagacatatat 80
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || ||||| ||| ||||||||||||||||||||||
Sbjct: 92 attcattaacatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacgga 150
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| || ||||| ||| ||| ||||||||||||||||||||| |||
Sbjct: 144 tcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaatctagaca 85
Query: 202 tatat 206
|||||
Sbjct: 84 tatat 80
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 66 attcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacggag 125
Query: 265 gaagta 270
| ||||
Sbjct: 126 ggagta 131
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 66 attcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacgga 124
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagg 265
|||||||| ||| ||||| |||||||||||| |||||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggagg 10
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| || |||| | || || ||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 67 atgaatcta 75
|||||||||
Sbjct: 71 atgaatcta 63
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 97 atatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||| ||||| ||| |||||||| |||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacgga 12
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcatt 36
||||||||||||||||||||||||
Sbjct: 11 ctccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 50 attcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 109
Query: 265 gaagta 270
||||||
Sbjct: 110 gaagta 115
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| |||||||||||| || ||||||||| |||||||||||| |||||||||
Sbjct: 50 attcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 108
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 234 atgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||||||||||||||||| ||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| ||||||||| ||| ||||| ||||| |||||||| |||||||||
Sbjct: 109 ctccgtttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaat 50
Query: 73 cta 75
|||
Sbjct: 49 cta 47
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
||||||||| ||| |||||||| ||| |||||||| ||||||||||||
Sbjct: 94 taagtcattctagcatttcccacattcatattgatattaatgaatcta 47
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 112 atgctagtatgacttacattgtgaaacgga 141
||||||| ||||||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 97 attcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 156
Query: 265 gaagta 270
| ||||
Sbjct: 157 ggagta 162
Score = 85.7 bits (43), Expect = 3e-16
Identities = 118/145 (81%), Gaps = 16/145 (11%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||| ||||||||||||||||| |||
Sbjct: 149 tcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctagaca 90
Query: 202 tatat------------tcattaacatcaatatgaatg----tgaaaaatgctagaatga 245
||||| |||||||||||| |||| ||| || ||||||||||||||
Sbjct: 89 tatatatctatctagattcattaacatcactatgtatgaatatgcgaaatgctagaatga 30
Query: 246 cttacattgtgaaacggaggaagta 270
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||| ||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 67 atgaatctaaacatatat 84
||||||||| ||||||||
Sbjct: 102 atgaatctagacatatat 85
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||| ||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 97 attcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 155
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 70 attcattagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 93 attcattagcatcaatatgaatgtggtaaatgttagaatgacttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 79.8 bits (40), Expect = 2e-14
Identities = 114/141 (80%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||| |||||| ||||| |||||||| ||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctagcatttctcacattcatattgatactaatgaat 70
Query: 73 ctaaaca------------tatattcattaacatcaatatgaatatgaaaaatgctagta 120
||| | | || |||||||| ||||||||||||| || ||||| ||| |
Sbjct: 71 ctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgttagaa 130
Query: 121 tgacttacattgtgaaacgga 141
|||||||||||||||||||||
Sbjct: 131 tgacttacattgtgaaacgga 151
Score = 75.8 bits (38), Expect = 3e-13
Identities = 118/147 (80%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| || |||| ||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 67 atgaatctaaacatatat------------tcattaacatcaatatgaatatgaaaaatg 114
||||||||| |||||||| |||||| |||||||||||| ||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| |||||||| |||||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 129
Query: 265 gaagta 270
||||||
Sbjct: 130 gaagta 135
Score = 85.7 bits (43), Expect = 3e-16
Identities = 106/129 (82%), Gaps = 11/129 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| ||||| || |||||||||||| |||
Sbjct: 122 tcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaatctagaca 63
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||||| |||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 62 tatat-----------aatatgaatgtgggaaatgctagaatgacttacattgtgaaatg 14
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 13 gagggagta 5
Score = 71.9 bits (36), Expect = 5e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||| || |||||||||
Sbjct: 129 ctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaat 70
Query: 73 ctaaacatatat 84
||| ||||||||
Sbjct: 69 ctagacatatat 58
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| || ||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 70 attcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 128
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 93 attcattaacattaatatgaatgtggagaatgctagaatgacttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 70 attcattaacactaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 114/141 (80%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatgaat 70
Query: 73 ctaaacatatat------------tcattaacatcaatatgaatatgaaaaatgctagta 120
||| | | |||| |||||||||| ||||||||| || | |||||||| |
Sbjct: 71 ctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatgctagaa 130
Query: 121 tgacttacattgtgaaacgga 141
|||||||||||||||||||||
Sbjct: 131 tgacttacattgtgaaacgga 151
Score = 67.9 bits (34), Expect = 7e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||| ||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 67 atgaatctaaacatatat 84
||||||||| ||||||||
Sbjct: 98 atgaatctagacatatat 81
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||| ||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 69 attcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaacggag 128
Query: 265 gaagta 270
||||||
Sbjct: 129 gaagta 134
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||
Sbjct: 69 attcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaacgga 127
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagtaa 271
||||||||||| |||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagtaa 4
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 97 atatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| || |||||| ||| |||||||||||| |||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacgga 12
Score = 46.1 bits (23), Expect = 3e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| |||||| || ||| |||| | ||| ||||| ||||||||||||
Sbjct: 128 ctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaatgaat 69
Query: 73 cta 75
|||
Sbjct: 68 cta 66
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 97.6 bits (49), Expect = 8e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 207 tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagga 266
||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 267 agtaa 271
|||||
Sbjct: 8 agtaa 4
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| || |||||||||||||||||||||||||| |||| ||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 85 tcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||| || ||| ||||| |||||||||||| |||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacgga 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatga 70
|||||||||| ||| ||||||||||||| | || ||||| ||||||||||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattttagcactttccacattcatattgatgttaatga 68
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 93 atcaatatgaatatgaaaaatgctagtatgacttacattgtgaaac 138
|||||||||||| || || |||||| |||||||||||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaac 113
Score = 46.1 bits (23), Expect = 3e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatga 192
||||||||||||| | || ||| ||| ||||||||||||||||
Sbjct: 26 taagtcattttagcactttccacattcatattgatgttaatga 68
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 97.6 bits (49), Expect = 8e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 269 taact 273
|||||
Sbjct: 6 taact 2
Score = 87.7 bits (44), Expect = 8e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 73.8 bits (37), Expect = 1e-12
Identities = 106/129 (82%), Gaps = 10/129 (7%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||| ||||| ||||| |||||||| || ||
Sbjct: 130 ctccgtttcacaatataagtcattctagcatttcccacattcatattgatatttat---- 75
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||||| || ||||| |||||||| ||| || |||||||||| |||||||||||||
Sbjct: 74 ctaaa------tttattaatatcaatataaatgtggaaaatgctagaatgacttacattg 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||| |||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 67 at 68
||
Sbjct: 65 at 66
Score = 58.0 bits (29), Expect = 7e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 93 atcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| || ||||||||| |||||||| |||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 129
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 8e-20
Identities = 106/128 (82%), Gaps = 14/128 (10%)
Strand = Plus / Plus
Query: 143 cacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaacat 202
|||||| ||||||||| ||| |||||||||||||||||||||| ||||||||||| ||||
Sbjct: 19 cacaatgtaagtcattatagcatttcccatatttatattgatgctaatgaatctagacat 78
Query: 203 atattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacgg 262
||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 79 --------------caatatgaatgtgggaaatgctagaatgtcttacattgtgaaacgg 124
Query: 263 aggaagta 270
||||||||
Sbjct: 125 aggaagta 132
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| ||||||| |||||| ||||||||| ||| ||||| | ||||||||||||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||||||||| ||| || |||||||| |||||||||||||||| |||||||
Sbjct: 70 attcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||||||||| |||||| |||||||| ||||||||||||||| ||||||
Sbjct: 70 attcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaacgga 12
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 91 acatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||| || ||||||||| ||| ||||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacgga 125
Score = 48.1 bits (24), Expect = 7e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
|||||||||||||| |||| |||| ||| ||||| ||||| ||||||||||
Sbjct: 126 ctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 3e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 107 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 158
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||||||||| || ||||| ||||| |||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatt 63
Query: 66 aatgaatctaaacatatat 84
|||||||||| ||||||||
Sbjct: 64 aatgaatctagacatatat 82
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| |||||||||||| || ||||| ||| ||||||||||||||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 95.6 bits (48), Expect = 3e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 67 attcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 126
Query: 265 gaagta 270
| ||||
Sbjct: 127 ggagta 132
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||||||||||||| ||| ||||| ||||| ||||| ||| |
Sbjct: 133 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 74
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 73 aatgaatcta 64
Score = 65.9 bits (33), Expect = 3e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 93 atcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||| ||||||||| || ||||||||| |||||||| |||||||||||||
Sbjct: 67 attcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 125
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgat 62
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 95.6 bits (48), Expect = 3e-19
Identities = 116/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||||||| ||||| || || ||||||||| ||||||||||| |||
Sbjct: 145 tcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaatctagaca 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| ||||||| || | |||||||||| ||||||||||||||||||
Sbjct: 85 tatatatccgtctagattcattaatataagtatgaatgtgggaaatgctagaatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 5e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||||||| |||||| |||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 67 atgaatctaaacatatat 84
||||||||| ||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||||||||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 93 attcattagcatcaatatggatgtgagaaatgctaaaatgacttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||||| || ||| |||||||| ||||||||||||||||||||||
Sbjct: 93 attcattagcatcaatatggatgtgagaaatgctaaaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 95.6 bits (48), Expect = 3e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 70 attcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||||||||||||| ||| ||||| ||||| ||||| ||| |
Sbjct: 4 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 65.9 bits (33), Expect = 3e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 93 atcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 125
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||| ||||||||| || ||||||||| |||||||| |||||||||||||
Sbjct: 70 attcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgat 62
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||
Sbjct: 126 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 95.6 bits (48), Expect = 3e-19
Identities = 116/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
|||||||||||| |||| ||| |||| || ||||||||||||| ||||||||||| |||
Sbjct: 145 tcacaatataagccattctagcatttttcacatttatattgatgataatgaatctagaca 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| |||||||||| |||||||||||| |||||||| |||||||||
Sbjct: 85 tatatatctatctagattcattaacataaatatgaatgtgggaaatgctacaatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
||||||||||||||||||||
Sbjct: 25 tattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 3e-19
Identities = 116/141 (82%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||| | |
Sbjct: 18 tcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatctagata 77
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
|||| |||||| ||||||||| ||||||||||||||||||||| ||||
Sbjct: 78 gatatatatgtctagattcattatcatcaatataaatgtgaaaaatgctagaatggctta 137
Query: 250 cattgtgaaacggaggaagta 270
||||||||||||||| ||||
Sbjct: 138 tattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 5e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| ||||||||||||||||||| |||| ||| |||| | ||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 67 atgaatctaaacatatat 84
||||||||| ||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 79.8 bits (40), Expect = 2e-14
Identities = 114/141 (80%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||| ||||| ||||| ||||| ||||||||||||
Sbjct: 11 ctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaat 70
Query: 73 ctaaaca------------tatattcattaacatcaatatgaatatgaaaaatgctagta 120
||| | | || |||||||| ||||||||| ||| ||||||||||||| |
Sbjct: 71 ctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgctagaa 130
Query: 121 tgacttacattgtgaaacgga 141
|| |||| |||||||||||||
Sbjct: 131 tggcttatattgtgaaacgga 151
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 1e-18
Identities = 115/140 (82%), Gaps = 12/140 (8%)
Strand = Plus / Minus
Query: 143 cacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaacat 202
|||||||||||||||| || ||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 144 cacaatataagtcattctaacatttctcatattcatattgatgctaatgaatctaaacat 85
Query: 203 at------------attcattaacatcaatatgaatgtgaaaaatgctagaatgacttac 250
|| |||||||| ||||||||||||| || ||||| |||||||||||||
Sbjct: 84 atatatctatctaaattcattagcatcaatatgaatatggaaaatactagaatgacttat 25
Query: 251 attgtgaaacggaggaagta 270
| |||| |||||||||||||
Sbjct: 24 actgtggaacggaggaagta 5
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| ||||||| |||||||||||||||| || |||||| | ||| ||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 67 atgaatctaaacatatat 84
||||||||||||||||||
Sbjct: 98 atgaatctaaacatatat 81
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||||||||||||| ||| ||||| |||||||||||| |||||| |||||||
Sbjct: 93 attcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtggaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||||||||||||||||| ||||| ||| |||||||| |||||| ||||||
Sbjct: 93 attcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtggaacgga 151
Score = 48.1 bits (24), Expect = 7e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
||||||| |||| ||||||||||| |||||||| | ||| ||||||||| ||||||||
Sbjct: 11 ctccgttccacagtataagtcattctagtattttccatattcatattgatgctaatgaat 70
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 93.7 bits (47), Expect = 1e-18
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| |||||||||| | ||||||||||||| ||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctagtatttctcatatttatattgatgataatgaat 70
Query: 73 cta 75
|||
Sbjct: 71 cta 73
Score = 87.7 bits (44), Expect = 8e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||
Sbjct: 18 tcacaatataagtcattctagtatttctcatatttatattgatgataatgaatcta 73
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||||||||| ||| ||| |||| ||||||||||||| ||||||||||||||
Sbjct: 70 attcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||||||||| ||||||| |||| |||| |||||||| |||||||||||||
Sbjct: 70 attcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||| ||||||||||||| ||||||||||| ||||
Sbjct: 90 aaatgctacaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 91.7 bits (46), Expect = 5e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagtaac 272
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtaac 139
Score = 73.8 bits (37), Expect = 1e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 93 atcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 130
Score = 71.9 bits (36), Expect = 5e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctaga-atgacttacattgtgaaacgga 263
||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||
Sbjct: 71 attcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaaacgga 12
Query: 264 ggaagtaa 271
|| |||||
Sbjct: 11 gggagtaa 4
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 91.7 bits (46), Expect = 5e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
||||| |||||||| |||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 269 ta 270
||
Sbjct: 107 ta 108
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 238 tagaatgacttacattgtgaaacggaggaagtaact 273
|||||||||||||||||||||||||||| |||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtaact 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaat 68
|||||||||||||| |||||||| |||||||| | |||||||||||||| |||||
Sbjct: 102 ctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatattaat 47
Score = 61.9 bits (31), Expect = 4e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 87 attaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||| |||||||| ||| |||||||| |||| ||||||| ||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacgga 101
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 58 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggag 117
Query: 265 gaagta 270
| ||||
Sbjct: 118 ggagta 123
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| ||||||||| ||| ||||| |||||| ||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 63 atgaatcta 55
Score = 79.8 bits (40), Expect = 2e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 231 aaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 aaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||
Sbjct: 58 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacgga 116
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 102 aatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||| |||||||||| ||||||||||||||||||||||
Sbjct: 51 aatatggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
||||||||| ||| |||||| | ||| |||||||||||||||||||||
Sbjct: 102 taagtcattctagcatttcctacattcatattgatgttaatgaatcta 55
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 91.7 bits (46), Expect = 5e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 216 tcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagtaa 271
|||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagtaa 117
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 91 acatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacgga 12
Score = 67.9 bits (34), Expect = 7e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||| |||||||||||||| ||||||||| |||||||| | ||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 94 tcaatatgaatatgaaaaatgctagtatgacttacattgtgaaa 137
||||||||||| |||||||| |||| |||||||||||| |||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaa 105
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||| |||||||||||| ||| |||||||||||||||||||||| ||||||||||
Sbjct: 61 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 120
Query: 265 gaagta 270
| ||||
Sbjct: 121 ggagta 126
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||
Sbjct: 61 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 119
Score = 81.8 bits (41), Expect = 5e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 218 aatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||| |||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| ||||||||| ||| |||||| | ||| |||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 67 atgaatctaaa 77
|||||||||||
Sbjct: 66 atgaatctaaa 56
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaa 199
||||||||| ||| ||||| |||||| |||||||| ||||||||||||||
Sbjct: 105 taagtcattctagcatttctcatattcatattgatattaatgaatctaaa 56
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatatt 59
|||||||||||||||||||||||| ||| |||| |||||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 96 aatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||| ||| || |||||||||| |||||||| |||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacgga 12
Score = 48.1 bits (24), Expect = 7e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatatt 181
||||||||||||||||| ||| |||| ||| |||||||||
Sbjct: 18 tcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||| | |||| ||||||||||||| ||||||||||||||||||||
Sbjct: 70 attcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||| | | || |||||||||| || |||||||||||||||||||
Sbjct: 70 attcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacgga 12
Score = 67.9 bits (34), Expect = 7e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||||| ||||| ||| ||| |||| ||| |||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtt 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
||||||| ||||| ||| ||| |||| ||| | |||||||||||||||||||||||
Sbjct: 18 tcacaatgtaagttattctagcattttccacaattatattgatgttaatgaatcta 73
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 242 atgacttacattgtgaaacggaggaagta 270
|||||||||||||||||||||||| ||||
Sbjct: 98 atgacttacattgtgaaacggagggagta 126
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||||||||||||||| |||||| |||| |||||||||| |||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacggag 124
Query: 265 gaagta 270
| ||||
Sbjct: 125 ggagta 130
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||| || |||||| ||| |||||||||| ||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacgga 123
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||| ||| |||||||| | |||||| |||||||||||||||| ||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| ||||||||||| || ||||||| | || |||| ||||| ||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 67 atgaatctaaacatatat 84
||||||||| | ||||||
Sbjct: 70 atgaatctagatatatat 53
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 97 atatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| |||||||| |||||| ||||||||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 3e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 164 atttcccatatttatattgatgttaatgaatctaaacatatat 206
|||| ||| ||| ||||||||||||||||||||| | ||||||
Sbjct: 95 attttccacattcatattgatgttaatgaatctagatatatat 53
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||||||| | ||||||||||||||||||| ||||||||||
Sbjct: 70 attcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| ||| | |||||| |||||||||||| |||||||||
Sbjct: 70 attcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacgga 12
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||||| |||||||| |||||||||||| |||||||||
Sbjct: 93 attcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacgga 151
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| ||||||||| ||| ||| | || ||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 91.7 bits (46), Expect = 5e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
|||||||||||||| | |||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 78 attaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacggagggag 137
Query: 269 ta 270
||
Sbjct: 138 ta 139
Score = 77.8 bits (39), Expect = 7e-14
Identities = 106/129 (82%), Gaps = 7/129 (5%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||| ||| | |||||||||||||||| |||||| | |
Sbjct: 126 tcacaatgtaagtcattctagcattttccacaattatattgatgttaataaatctatata 67
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
||| | |||||||| | |||||||||||||| ||||||||||||||||||| |
Sbjct: 66 gatact-------atcaatataattgtgaaaaatgctaaaatgacttacattgtgaaatg 14
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 13 gagggagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 112/136 (82%), Gaps = 7/136 (5%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||| ||||||||| ||||||||||||| |||| | ||| |||||||||| |
Sbjct: 4 gtactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgatagt 63
Query: 66 aatgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgact 125
| |||| | || ||| |||||||||||||| | | || |||||||||| ||||||
Sbjct: 64 a-----tctata--tagatttattaacatcaatataattgtggaaaatgctagaatgact 116
Query: 126 tacattgtgaaacgga 141
||||||||||||||||
Sbjct: 117 tacattgtgaaacgga 132
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| |||| ||| ||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 67 atgaatcta 75
|| ||||||
Sbjct: 79 ataaatcta 71
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 70 attcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacggag 129
Query: 265 gaagta 270
||||||
Sbjct: 130 gaagta 135
Score = 85.7 bits (43), Expect = 3e-16
Identities = 106/129 (82%), Gaps = 11/129 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| ||| |||||||| ||| | |||||| |||||||||||
Sbjct: 122 tcacaatataagtcattctagcatttcccacattcacattgatattaatgaatct----- 68
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
|||||| |||||| |||||||| |||||||||||||||||| |||||||||||
Sbjct: 67 ------cattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacg 14
Query: 262 gaggaagta 270
|||| ||||
Sbjct: 13 gagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 104/129 (80%), Gaps = 11/129 (8%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||| ||||| ||||| | |||||| |||||||||
Sbjct: 129 ctccgtttcacaatataagtcattctagcatttcccacattcacattgatattaatgaat 70
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
| ||||||| |||||| ||||| || ||||||||| |||||||| ||||
Sbjct: 69 c-----------tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattg 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 65.9 bits (33), Expect = 3e-10
Identities = 108/135 (80%), Gaps = 11/135 (8%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||||||||||||| ||| ||||| ||||| | |||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 67 atgaatctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||| | ||||||||| |||||| ||||| || ||||||||| |||||||
Sbjct: 65 atg-----------agattcattaatatcaatgtgaatgtgggaaatgctagaatgactt 113
Query: 127 acattgtgaaacgga 141
| |||||||||||||
Sbjct: 114 atattgtgaaacgga 128
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 93 attcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 87.7 bits (44), Expect = 8e-17
Identities = 115/141 (81%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| ||||||||| ||| |||||||| ||| |||| |||||| ||||||||||| |
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaatctaaata 86
Query: 202 tatat------------tcattaacatcaatatgaatgtgaaaaatgctagaatgactta 249
||||| ||||||||||| |||||||||||| ||||| || |||||||||
Sbjct: 85 tatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaaatgactta 26
Query: 250 cattgtgaaacggaggaagta 270
|| ||||||||||||| ||||
Sbjct: 25 caatgtgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 3e-16
Identities = 120/148 (81%), Gaps = 12/148 (8%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||||| | |||||||||||| |||||| ||||| |||| ||||||
Sbjct: 4 gtactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtt 63
Query: 66 aatgaatctaaaca------------tatattcattaacatcaatatgaatatgaaaaat 113
|||||||||| ||| || |||||| |||||| |||||||| || ||||
Sbjct: 64 aatgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaat 123
Query: 114 gctagtatgacttacattgtgaaacgga 141
||||| ||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacgga 151
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||| |||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 67 atgaatctaaacatatat 84
||||||||||| ||||||
Sbjct: 98 atgaatctaaatatatat 81
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||||||| | ||||||||||||||||||| ||||||||||
Sbjct: 93 attcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacggag 152
Query: 265 gaagta 270
||||||
Sbjct: 153 gaagta 158
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| ||||||||| ||| ||| | || ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 67 atgaatctaaacata 81
||||||||| |||||
Sbjct: 65 atgaatctagacata 79
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||||| |||||||| |||||||||||| |||||||||
Sbjct: 70 attcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacgga 12
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| ||| | |||||| |||||||||||| |||||||||
Sbjct: 93 attcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 89.7 bits (45), Expect = 2e-17
Identities = 92/110 (83%), Gaps = 12/110 (10%)
Strand = Plus / Minus
Query: 151 aagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatat---- 206
|||||||| ||| |||||||| ||| ||||||||||||||||||||| ||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 207 --------tcattaacatcaatatgaatgtgaaaaatgctagaatgactt 248
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 71.9 bits (36), Expect = 5e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgactt 248
||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 65.9 bits (33), Expect = 3e-10
Identities = 89/110 (80%), Gaps = 12/110 (10%)
Strand = Plus / Minus
Query: 29 aagtcattttagtatttcttacatttatattgatgttaatgaatctaaacatatat---- 84
|||||||| ||| ||||| ||||| ||||||||||||||||||||| ||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 85 --------tcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
|||||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 29 aagtcattttagtatttcttacatttatattgatgttaatgaatcta 75
|||||||| ||| |||||| ||||| |||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatcta 47
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
|||||||||||||||||||||| || ||||||||| |||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 89.7 bits (45), Expect = 2e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 218 aatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 87.7 bits (44), Expect = 8e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 96 aatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 123
Score = 58.0 bits (29), Expect = 7e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 97 atatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||| ||||||||| || |||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 3e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| ||||||||| ||| ||||| ||||| ||||| | ||||||||
Sbjct: 124 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtactaatgaat 65
Query: 73 ctaaacatatat 84
||| ||||||||
Sbjct: 64 ctagacatatat 53
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 89.7 bits (45), Expect = 2e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
||||| |||||||| |||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 269 taact 273
|||||
Sbjct: 6 taact 2
Score = 87.7 bits (44), Expect = 8e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| |||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 67 at 68
||
Sbjct: 65 at 66
Score = 65.9 bits (33), Expect = 3e-10
Identities = 105/129 (81%), Gaps = 10/129 (7%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||| ||||| ||||| |||||||| || ||
Sbjct: 130 ctccgtttcacaatataagtcattctagcatttcccacattcatattgatatttat---- 75
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||||| || ||||| |||||||| ||| || ||||||||| |||||||||||||
Sbjct: 74 ctaaa------tttattaatatcaatataaatgtgggaaatgctagaatgacttacattg 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 214 catcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatg 63
||||| |||||||||||||| ||||||||| |||||||||| ||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 67.9 bits (34), Expect = 7e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 92 catcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| ||| |||| |||| ||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 214 catcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||| ||||||||||||| || ||||||||||||| |||||| |||| ||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatg 63
||||| ||| |||||| ||| |||||||||||| |||| | |||||||||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
Score = 46.1 bits (23), Expect = 3e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 92 catcaatatgaatatgaaaaatgctagtatgacttacattgtgaaac 138
||||||||| ||| ||||||||| || |||||||||||| ||||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaac 133
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 87.7 bits (44), Expect = 8e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 87.7 bits (44), Expect = 8e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 65.9 bits (33), Expect = 3e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 93 atcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| || |||||||||| || |||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 3e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 93 atcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| || |||||||||| || |||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 118
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 87.7 bits (44), Expect = 8e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 5e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 65.9 bits (33), Expect = 3e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 93 atcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| || |||||||||| || |||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 93 atcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| || ||||||||| || |||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacgga 118
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 87.7 bits (44), Expect = 8e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||
Sbjct: 70 attcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggag 11
Query: 265 gaagtaac 272
||||||||
Sbjct: 10 gaagtaac 3
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctagtatttcccacattcatattgatactaatgaat 70
Query: 73 cta 75
|||
Sbjct: 71 cta 73
Score = 75.8 bits (38), Expect = 3e-13
Identities = 112/138 (81%), Gaps = 9/138 (6%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||| |||||||||||| ||| |||||||| ||||||||||| | |
Sbjct: 18 tcacaatataagtcattctagtatttcccacattcatattgatactaatgaatctagata 77
Query: 202 ---------tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacat 252
|| || |||| |||||||||||||||| ||||| | |||||||||||||
Sbjct: 78 gatatagtctagatccattggcatcaatatgaatgtgggaaatggtggaatgacttacat 137
Query: 253 tgtgaaacggaggaagta 270
| ||||||||||| ||||
Sbjct: 138 tatgaaacggagggagta 155
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||||||| || |||| |||| |||||||| |||||||||||||
Sbjct: 70 attcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 87.7 bits (44), Expect = 8e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 207 tcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagga 266
||||| |||||||||| ||||||| |||||||||||||||||| ||||| ||||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 267 agta 270
||||
Sbjct: 90 agta 93
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatga 70
|||||||| ||||||||||||||| ||| |||||| |||||||||||||||| |||||
Sbjct: 87 ctccgttttacaatataagtcattctagcatttctcacatttatattgatgtaaatga 30
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattt 37
|||||||||||||||||||||||||||||||
Sbjct: 5 tactctctccgtttcacaatataagtcattt 35
Score = 58.0 bits (29), Expect = 7e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 144 acaatataagtcattttagtatttcccatatttatattgatgttaatga 192
||||||||||||||| ||| ||||| || |||||||||||||| |||||
Sbjct: 78 acaatataagtcattctagcatttctcacatttatattgatgtaaatga 30
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 8e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||| ||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 93 attcattagcatcgatatggatgtgaaaaatactagaatgacttacattatgaaacggag 152
Query: 265 gaagtaac 272
| ||||||
Sbjct: 153 ggagtaac 160
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 70 attcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||| |||| |||||||| || |||||||||| |||||||||||| |||||||||
Sbjct: 70 attcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaacgga 12
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| |||| ||||| || |||||||| |||| |||||||||||| |||||||||
Sbjct: 93 attcattagcatcgatatggatgtgaaaaatactagaatgacttacattatgaaacgga 151
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| ||||||||| |||||||| | |||| |||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||| |||||| |||||||||| | |||||||||||||||||||
Sbjct: 93 attcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacggag 152
Query: 265 gaagtaa 271
|||||||
Sbjct: 153 gaagtaa 159
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| |||| | || ||| ||| || |||| |||| |||||||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgttaatgaat 93
Query: 73 ctaaaca 79
|||||||
Sbjct: 92 ctaaaca 86
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| ||||| || ||| |||||||| | | ||||||||||||||||||
Sbjct: 93 attcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 85.7 bits (43), Expect = 3e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||||||| ||||||||||||| |||||| | ||||||||||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgt 62
Query: 65 taa 67
|||
Sbjct: 63 taa 65
Score = 85.7 bits (43), Expect = 3e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaa 67
|||||||||||||||||||||||||||| |||||| | |||||||||||||||||
Sbjct: 116 ctccgtttcacaatataagtcattttagcatttctcatatttatattgatgttaa 62
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagt 269
||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||| |||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 270 a 270
|
Sbjct: 5 a 5
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 210 ttaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagt 269
||||||||||||| ||| ||| |||||||| ||||||||| |||||||||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 270 a 270
|
Sbjct: 122 a 122
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaa 189
||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 109 tcacaatataagtcattttagcatttctcatatttatattgatgttaa 62
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 88 ttaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| ||||||| |||||||| ||||||||||||||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacgga 12
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaa 189
||||||| ||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 18 tcacaatgtaagtcattttagcatttctcatatttatattgatgttaa 65
Score = 67.9 bits (34), Expect = 7e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 88 ttaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| ||||||| |||||||| |||||||| |||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacgga 115
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 85.7 bits (43), Expect = 3e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 220 tatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||| ||||| ||| || |||| ||||||||||||| ||||||||||||||
Sbjct: 74 attcattaacaattatatggatgagagaaatcctagaatgacttatattgtgaaacggag 133
Query: 265 gaagta 270
||||||
Sbjct: 134 gaagta 139
Score = 65.9 bits (33), Expect = 3e-10
Identities = 107/129 (82%), Gaps = 7/129 (5%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||| ||| |||||| ||| |||| |||||||||||
Sbjct: 133 ctccgtttcacaatataagtcattctaggatttctctcatccatataattgttaatgaat 74
Query: 73 ctaaacatatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacattg 132
||| |||||| | |||| || ||||||| || ||||| |||| |||||||||||||
Sbjct: 73 ctagacatat----aataac-tc--tatgaatgtggaaaatactagaatgacttacattg 21
Query: 133 tgaaacgga 141
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtattt 45
|||||||||||||| ||||||||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagtattt 43
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 85.7 bits (43), Expect = 3e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 220 tatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||||||||||||| |||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 57 aaatgctagaatgacttacattgtgaaacgga 88
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 110 aaatgctagtatgacttacattgtgaaac 138
||||||||| |||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 3e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 216 tcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 71.9 bits (36), Expect = 5e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||
Sbjct: 59 atcaatatgaatgtggaaa-tgctagaatgacttatattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattga 61
|||||||||||||||||||||||| ||| ||||| ||||| |||||||
Sbjct: 108 ctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttc 46
||||| |||||||||||||||||||||||| ||| |||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttc 44
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 94 tcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||| || ||||||||| |||||||| |||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 107
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattga 183
||||||||||||||||| ||| |||||||| ||| |||||||
Sbjct: 101 tcacaatataagtcattctagcatttcccacattcatattga 60
Score = 50.1 bits (25), Expect = 2e-05
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 93 atcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| || ||| |||||| |||||||| |||||||||||||
Sbjct: 59 atcaatatgaatgtggaaa-tgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| |||||| || ||| ||| | ||||| |||| |||||||||||||
Sbjct: 11 ctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaat 70
Query: 73 ctaaacatata 83
||| |||||||
Sbjct: 71 ctagacatata 81
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| || |||||||| | |||||||||| |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacgga 12
Score = 48.1 bits (24), Expect = 7e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatata 205
|||||| || ||| ||| |||| ||| |||| |||||||||||||||| |||||||
Sbjct: 26 taagtctttctagcattgcccacattcatatagatgttaatgaatctagacatata 81
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| || |||||||| | |||||||||| |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacgga 12
Score = 46.1 bits (23), Expect = 3e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| |||||| || ||| ||| | ||||| |||| |||||||||||||
Sbjct: 11 ctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaat 70
Query: 73 cta 75
|||
Sbjct: 71 cta 73
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct: 67 attcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaatggag 126
Query: 265 gaagta 270
||||||
Sbjct: 127 gaagta 132
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 233 aatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||||| ||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 3e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||| ||||| ||| ||||||||| ||| ||| | ||||| |||| |||||||||||||
Sbjct: 126 ctccatttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaat 67
Query: 73 ctaaacatatat 84
||| ||||||||
Sbjct: 66 ctagacatatat 55
Score = 54.0 bits (27), Expect = 1e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaa 137
||||||||||||| |||||||| || |||||||| |||||||||||| |||||
Sbjct: 67 attcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaa 121
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatat 206
||||||||| ||| ||| | || ||| |||| |||||||||||||||| ||||||||
Sbjct: 111 taagtcattctagcattgcacacattcatatagatgttaatgaatctagacatatat 55
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 111 aatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||||||| |||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||||| |||||||||| ||||||||||||||||||| ||| |||||| |||
Sbjct: 70 attcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaacagag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||| |||||||| ||||||||||||| ||||||||||| ||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 91 acatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||| || |||||||| |||||||||||| |||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacgga 131
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 17 gtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaatcta 75
|||||| ||||||||||||| ||| |||| ||||| ||| ||||| |||||||||||
Sbjct: 15 gtttcataatataagtcattctagcattttccacattcatactgatgctaatgaatcta 73
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| |||| |||| ||||||||| ||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 67 atgaatctaaacatatat 84
||||||||| ||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||| ||||||||||||||| |||| |||||||| |||||||||||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| |||| |||| |||||||||||| ||| |||||||| |||||||||||| |||
Sbjct: 145 tcacaatgtaagacattctagtatttcccacattcatattgatattaatgaatctagaca 86
Query: 202 tatat 206
|||||
Sbjct: 85 tatat 81
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| |||||||||||| || |||| |||| ||| ||||||||||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacgga 151
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtattt 45
||||| |||||||||||||| ||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattt 43
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatatgggtaatgctagaatgacttacattatgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| ||||||||||| |||||||| |||||||||||| |||||||||
Sbjct: 93 attcattaacatctatatgaatatgggtaatgctagaatgacttacattatgaaacgga 151
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| ||||| || || |||||||| |||||||||||| |||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaacgga 12
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| ||||||||| ||| ||| | | ||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| | ||||||||| | |||||||||| | |||||||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| | |||||| || | |||||||| | | ||||||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 70 attcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||||||||| ||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 93 attcattagcatcaatatggatgtgaacaatagtagaatgacttacattatgaaacggag 152
Query: 265 gaagtaac 272
| ||||||
Sbjct: 153 ggagtaac 160
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||| |||| |||||||| || |||||||||| |||||||||||| |||||||||
Sbjct: 70 attcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaacgga 12
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||||| || |||| ||| ||| |||||||||||| |||||||||
Sbjct: 93 attcattagcatcaatatggatgtgaacaatagtagaatgacttacattatgaaacgga 151
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||| ||| ||||||||| || |||| | |||| ||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 83.8 bits (42), Expect = 1e-15
Identities = 106/129 (82%), Gaps = 10/129 (7%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| |||||||||||| |||||||||||| |||||||||||||| |||||| |||
Sbjct: 123 tcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaatctagaca 64
Query: 202 tatattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 261
| | || ||| |||||||| |||| ||||||| |||||||||||||||||
Sbjct: 63 ttt----------ataaatgtgaatgtgggaaatactagaataacttacattgtgaaacg 14
Query: 262 gaggaagta 270
|||||||||
Sbjct: 13 gaggaagta 5
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
|||||||||||||||||| || |||||||| |||||||| |||||||||||||||||||
Sbjct: 75 attaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacggaggaag 134
Query: 269 ta 270
||
Sbjct: 135 ta 136
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 87 attaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 75 attaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacgga 129
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| |||||||||||| ||||| | ||| |||||||||||||| |||
Sbjct: 130 ctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaat 71
Query: 73 ctaaacat 80
||| ||||
Sbjct: 70 ctagacat 63
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 81.8 bits (41), Expect = 5e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 214 catcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 92 catcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagtaac 272
|||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 69 aaatgctagaatgatttacattgtaaaacggagggagtaac 109
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatg 63
||||| |||||||||||||| ||||||||| ||| ||||| || || |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 81.8 bits (41), Expect = 5e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 226 tgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||| ||||||||||||||||||||||||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttc 46
||||||| |||||||||||||| ||||||||||||| |||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcatttc 44
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 109 aaaatgctagtatgacttacattgtgaaacgga 141
|||||||||| ||||||||||||||||||||||
Sbjct: 69 aaaatgctagaatgacttacattgtgaaacgga 101
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 81.8 bits (41), Expect = 5e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 218 aatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 92 catcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacggat 142
|||||||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggat 11
Score = 67.9 bits (34), Expect = 7e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 214 catcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacgga 263
||||||||||||| || |||||||||||||||||| |||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatg 185
||||||||||||||||| ||| |||||||||||| |||||||||
Sbjct: 18 tcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatatt 59
|||||||||||||||||||||||| ||| ||||| ||||| |||||
Sbjct: 113 ctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatataagtcattttagtatttcttacatttatattgatg 63
||||||||||||||||||||||| ||| ||||| | ||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 96 aatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| || ||||||||| |||||||| |||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 112
Score = 48.1 bits (24), Expect = 7e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatatt 181
||||||||||||||||| ||| |||||||| ||| |||||
Sbjct: 106 tcacaatataagtcattctagcatttcccacattcatatt 67
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 81.8 bits (41), Expect = 5e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||||||| |||| || |||| ||||||||| ||||||||||| |||
Sbjct: 119 tcacaatataagtcattttagcattttccgtattcatattgatgataatgaatctagaca 60
Query: 202 tatat 206
|||||
Sbjct: 59 tatat 55
Score = 81.8 bits (41), Expect = 5e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||||||||||||| | ||||||||| ||||||||| ||||||||||||||
Sbjct: 67 attcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacggag 126
Query: 265 gaagt 269
|||||
Sbjct: 127 gaagt 131
Score = 71.9 bits (36), Expect = 5e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||||||||||||||||| |||| ||| ||||||||| ||||||||
Sbjct: 126 ctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaat 67
Query: 73 ctaaacatatat 84
||| ||||||||
Sbjct: 66 ctagacatatat 55
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||||||||| | ||||||||| |||||||| |||||||||||||
Sbjct: 67 attcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacgga 125
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 110 aaatgctagtatgacttacattgtgaaac 138
||||||||| |||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 81.8 bits (41), Expect = 5e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 218 aatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 5e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 206 ttcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagg 265
||||||||||||| ||| |||||| |||||||||||||||||| |||||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 266 aagta 270
||||
Sbjct: 117 gagta 121
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| ||||||||| ||| ||||| ||||||||| ||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 67 atgaa 71
|||||
Sbjct: 61 atgaa 57
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaa 193
||||||| ||||||||| ||| |||||||| ||||||| |||||||||||||
Sbjct: 108 tcacaatctaagtcattctagcatttcccacatttatactgatgttaatgaa 57
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 84 ttcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| ||| ||| || ||||||||| |||||||| |||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacgga 114
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatatt 59
|||||||||||||| ||||||||||||| ||||| ||||| |||||
Sbjct: 11 ctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 96 aatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Score = 48.1 bits (24), Expect = 7e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatatt 181
||||||| ||||||||||||| |||||||| ||| |||||
Sbjct: 18 tcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 81.8 bits (41), Expect = 5e-15
Identities = 91/110 (82%), Gaps = 12/110 (10%)
Strand = Plus / Plus
Query: 151 aagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatat------ 204
|||||||| ||| |||||||| ||| ||||||||||||||||||||| ||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 205 ------attcattaacatcaatatgaatgtgaaaaatgctagaatgactt 248
||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 73.8 bits (37), Expect = 1e-12
Identities = 90/110 (81%), Gaps = 12/110 (10%)
Strand = Plus / Minus
Query: 151 aagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatat---- 206
|||||||| ||| |||||||| ||| ||||||||||||||||||||||| | ||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 207 --------tcattaacatcaatatgaatgtgaaaaatgctagaatgactt 248
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 29 aagtcattttagtatttcttacatttatattgatgttaatgaatctaaacatatat 84
|||||||| ||| ||||| ||||| ||||||||||||||||||||| ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatat 56
Score = 58.0 bits (29), Expect = 7e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 29 aagtcattttagtatttcttacatttatattgatgttaatgaatctaaa 77
|||||||| ||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaa 62
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
|||||||||||||||||||||| || ||||||||| |||||||
Sbjct: 44 attcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 223 gaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 113 tgctagtatgacttacattgtgaaacgga 141
|||||| ||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 79.8 bits (40), Expect = 2e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 227 gtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gtgagaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 211 taacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||| |||||||| |||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Query: 271 a 271
|
Sbjct: 4 a 4
Score = 56.0 bits (28), Expect = 3e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||||||||| ||| ||| ||||| ||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 88 aaatgctagaatgacttacattgtgaaacgga 119
Score = 50.1 bits (25), Expect = 2e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 89 taacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||| ||||| || ||||||||| || ||||| |||||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 3e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgtta 188
||||||||||||| ||| ||| |||||||| ||| | ||||||||||
Sbjct: 18 tcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttct 47
|||||||||||||| ||||||||| ||| ||||||
Sbjct: 120 ctccgtttcacaatgtaagtcattctagcatttct 86
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 215 atcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 5e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 216 tcaatatgaatgtgaaaaatgctagaatgacttacattgtg-aaacggaggaagta 270
|||||||||||||| |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagta 116
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgat 62
||||| |||||||||||||||||||||||| ||| ||||| ||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 58.0 bits (29), Expect = 7e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 93 atcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| || ||||||||| |||||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgat 184
||||||||||||||||| ||| |||||||| ||| ||||||||
Sbjct: 18 tcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattga 183
||||||||||||||||| ||| |||||||| ||| |||||||
Sbjct: 102 tcacaatataagtcattctagcatttcccacattcatattga 61
Score = 48.1 bits (24), Expect = 7e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 94 tcaatatgaatatgaaaaatgctagtatgacttacattgtgaaa 137
||||||||||| || ||||||||| |||||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
Score = 48.1 bits (24), Expect = 7e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 18 tttcacaatataagtcattttagtatttcttacatttatattga 61
||||||||||||||||||| ||| ||||| ||||| |||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 77.8 bits (39), Expect = 7e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaatc 73
||||||||||||||||||||||||||| |||| | | ||||| ||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatc 71
Query: 74 taaacatatat 84
|| ||| ||||
Sbjct: 72 tagacagatat 82
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||| ||| | ||| |||||||||||| ||||||||| |||||||||||||
Sbjct: 70 attcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaacggaa 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||||||||||||||||| |||| |||||||| ||| ||||||||||||||| |||
Sbjct: 18 tcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatctagaca 77
Query: 202 tatat 206
||||
Sbjct: 78 gatat 82
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| ||| | |||||||||||||||| |||||||| |||||||||||||
Sbjct: 70 attcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaacgga 12
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagg 265
|||||||||||||||||| || ||||||||| |||||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggagg 125
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcatttta 39
|||||||||||||||||||||||||||
Sbjct: 124 ctccgtttcacaatataagtcatttta 98
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 97 atatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| ||||||||| || |||||||| |||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacgga 123
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 77.8 bits (39), Expect = 7e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 224 aatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 231 aaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||| |||||||||||||||| ||||
Sbjct: 44 aaaatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 101 gaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||| |||||||||| ||||||| ||||||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 109 aaaatgctagtatgacttacattgtgaaacgga 141
|||||||||| ||||||||||||||||||||||
Sbjct: 77 aaaatgctagaatgacttacattgtgaaacgga 109
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtattt 45
||||||| |||||||||||||| ||||||||| ||| ||||
Sbjct: 118 tgtactccctccgtttcacaatgtaagtcattctagcattt 78
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaacggag 152
Query: 265 gaagtaa 271
|||||||
Sbjct: 153 gaagtaa 159
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgttggtaatgctagaatgacttacattatgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||| ||| ||||||||| ||| ||| | ||||| |||| ||||||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtt 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| | |||||||| |||||||||||| |||||||||
Sbjct: 70 attcattaacatctatatgaatgttggtaatgctagaatgacttacattatgaaacgga 12
Score = 48.1 bits (24), Expect = 7e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| ||||||||| ||| ||| | |||| ||||| |||||||||||||
Sbjct: 152 ctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaat 93
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 aatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||||||| |||||||||
Sbjct: 121 aatgctagaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 77.8 bits (39), Expect = 7e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 14 tccgtttcacaatataagtcattttagtatttcttacatt 53
||||||||| ||||||||||||||||| |||||| |||||
Sbjct: 84 tccgtttcataatataagtcattttagcatttctcacatt 45
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaatgacttatattatgaaacggag 11
Query: 265 gaa 267
|||
Sbjct: 10 gaa 8
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||||||||||||| ||| ||| | ||||| |||| |||||||||||||
Sbjct: 11 ctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaat 70
Query: 73 ctaaacatatat 84
|| ||||||||
Sbjct: 71 ctggacatatat 82
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 146 aatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatata 205
||||||||||||| ||| ||| |||| ||| |||| ||||||||||||||| |||||||
Sbjct: 22 aatataagtcattctagcattgcccacattcatatagatgttaatgaatctggacatata 81
Query: 206 t 206
|
Sbjct: 82 t 82
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| || |||||||| |||||||| ||| |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaatgacttatattatgaaacgga 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcatt 36
||||| ||||||||||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatataagtcatt 127
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagtaa 271
||||| |||||||||||| ||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagtaa 4
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||| ||||||| ||| ||||||| |||||| |||||||||||||||| | ||||||||
Sbjct: 73 attcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaacggag 132
Query: 265 gaagtaac 272
| ||||||
Sbjct: 133 ggagtaac 140
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 91 acatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||| |||||||| ||| ||||| ||| |||||||||||| |||||||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacgga 12
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||| ||||||| ||| |||| || |||||| ||| |||||||||||| | |||||||
Sbjct: 73 attcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaacgga 131
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| ||| |||||| |||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaaacggag 11
Query: 265 gaagtaa 271
|||||||
Sbjct: 10 gaagtaa 4
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||| ||| |||||||||| | |||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatatgagcaatgctagaaagtcttacattatgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||| ||| |||||| || ||||||| | ||||| |||| |||||||||||||
Sbjct: 11 ctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaat 70
Query: 73 ctaaacatatat 84
||| ||||||||
Sbjct: 71 ctagacatatat 82
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| || ||| |||| | |||||||||| |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaaacgga 12
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
||||||||| ||||||||||| | ||||||||||| ||||||||| ||||||||||| ||
Sbjct: 76 attaacatctatatgaatgtggacaatgctagaataacttacattatgaaacggagggag 135
Query: 269 ta 270
||
Sbjct: 136 ta 137
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 233 aatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||| ||||||||| ||||||||||||||||
Sbjct: 42 aatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||| || ||| ||||||| |||| |||||||||||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 265 gaagta 270
||||||
Sbjct: 132 gaagta 137
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| ||||| |||||| ||||||| ||| ||||||||||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacgga 130
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| |||| |||||||| ||| || | || |||| |||||||||||||
Sbjct: 131 ctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaat 72
Query: 73 ctaaaca 79
||||||
Sbjct: 71 ttaaaca 65
Score = 48.1 bits (24), Expect = 7e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| |||| |||||||| ||| | ||||| |||| ||||||||||||| ||||||
Sbjct: 124 tcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaatttaaaca 65
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 91 acatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||| |||| |||||||||||||||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacgga 97
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 225 atgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||| ||||||||||||| ||||||||||| ||| ||||
Sbjct: 50 atgtgaaaaatactagaatgacttatattgtgaaacgaagggagta 5
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtattt 45
|||||| || ||||||||||||||||||||| ||||||||
Sbjct: 4 gtactcccttcgtttcacaatataagtcattctagtattt 43
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||| ||||||||||| | |||||||||| | |||||||| ||||||||||
Sbjct: 91 attcattaacatttatatgaatgtggacaatgctagaaagtcttacattatgaaacggag 150
Query: 265 gaagta 270
||||||
Sbjct: 151 gaagta 156
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||||||||||||| | |||||||||| | |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||||||||||||||| |||||||| | | |||||||| |||||||||
Sbjct: 70 attcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaacgga 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||| ||| |||| | || ||| ||| | || ||| |||||||||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtt 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||||| |||||||| || | |||||||| | | |||||||| |||||||||
Sbjct: 91 attcattaacatttatatgaatgtggacaatgctagaaagtcttacattatgaaacgga 149
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 218 aatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagtaa 271
|||||||||||| |||| ||| |||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagtaa 110
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatatt 59
|||||||||||||| ||||||||||||||||||| ||||| |||||
Sbjct: 103 ctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatatt 181
||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 96 tcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcatttta 39
|||||| |||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcatttta 37
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 241 aatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
||||||||| ||||||||||| | |||||||||| | |||||||||||||||||||| ||
Sbjct: 79 attaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacggagggag 138
Query: 269 ta 270
||
Sbjct: 139 ta 140
Score = 54.0 bits (27), Expect = 1e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 87 attaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| |||||||| || | |||||||| | | ||||||||||||||||||
Sbjct: 79 attaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacgga 133
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||| |||||||| || | ||||||| || | |||||||||||||||||||| ||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 3e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 91 acatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||| ||||||||||| | ||||||| | | ||||||||||||||||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||| ||||||| |||| ||| ||| |||||||||||||||||||||| ||||||||||
Sbjct: 70 attcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||| ||||||| |||| ||||||| ||||||||| |||||||||||| |||||||||
Sbjct: 70 attcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacgga 12
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||| ||||||| | |||||||||||||||||| ||||||||||||| |||||| |||
Sbjct: 93 attcactaacatccaagtgaatgtgaaaaatgctacaatgacttacattatgaaacagag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 48.1 bits (24), Expect = 7e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaac 138
||||| ||||||| | ||||| |||||||||||| |||||||||||| ||||||
Sbjct: 93 attcactaacatccaagtgaatgtgaaaaatgctacaatgacttacattatgaaac 148
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||| || ||| ||||||| |||| |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| ||||| |||||| ||||||| ||| ||||||||||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| |||| |||||||| ||| || | || |||| |||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaat 70
Query: 73 ctaaaca 79
||||||
Sbjct: 71 ttaaaca 77
Score = 48.1 bits (24), Expect = 7e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| |||| |||||||| ||| | ||||| |||| ||||||||||||| ||||||
Sbjct: 18 tcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaatttaaaca 77
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||||| | |||||||||| | |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtagacaatgctagaaagtcttacattatgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| | || |||||| | |||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgtggacaaacctagaaagtcttacattatgaaacggag 152
Query: 265 gaagtaact 273
| |||||||
Sbjct: 153 ggagtaact 161
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 48 tacatttatattgatgttaatgaatctaaacatatat 84
|||||| |||| |||||||||||||||| ||||||||
Sbjct: 46 tacattcatatagatgttaatgaatctagacatatat 82
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| | | |||||||| | | |||||||| |||||||||
Sbjct: 70 attcattaacatctatatgaatgtagacaatgctagaaagtcttacattatgaaacgga 12
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 49 acatttatattgatgttaatgaatctaaaca 79
||||| |||| ||||||||||||||||||||
Sbjct: 116 acattcatatagatgttaatgaatctaaaca 86
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| | ||||||||| |||||||||| | |||||||||||||||||||
Sbjct: 70 attcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 3e-13
Identities = 78/90 (86%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 182 gatgttaatgaatctaaaca-tatattcattaacatcaatatgaatgtgaaaaatgctag 240
|||||||||||||||| ||| || ||||||||||||| ||||| ||||| ||||||||
Sbjct: 58 gatgttaatgaatctagacactagattcattaacatctatatgtatgtgggcaatgctag 117
Query: 241 aatgacttacattgtgaaacggaggaagta 270
|| | |||||||| ||||||||||| ||||
Sbjct: 118 aaagtcttacattatgaaacggagggagta 147
Score = 60.0 bits (30), Expect = 2e-08
Identities = 106/130 (81%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| |||| | || ||| ||| || ||||| | | |||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgttaatgaat 70
Query: 73 ctaaaca-tatattcattaacatcaatatgaatatgaaaaatgctagtatgacttacatt 131
||| ||| || ||||||||||||| ||||| || || |||||||| | | ||||||||
Sbjct: 71 ctagacactagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacatt 130
Query: 132 gtgaaacgga 141
|||||||||
Sbjct: 131 atgaaacgga 140
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| | ||||| ||| |||||||| | | ||||||||||||||||||
Sbjct: 70 attcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||||||| |||||||| | | |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| ||| |||||||| | | ||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacgga 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| || |||||||| |||| || || | |||||||||||||||||||
Sbjct: 93 attcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| |||| | | ||| ||| || ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
||||||||| ||||||||||| |||||||||| | |||||||||||||||||||||||
Sbjct: 73 attaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaag 132
Query: 269 ta 270
||
Sbjct: 133 ta 134
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||| |||||||||| | |||||| | ||||||||||| ||||
Sbjct: 56 atatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 3e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 87 attaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||| |||||||| || |||||||| | | ||||||||||||||||||
Sbjct: 73 attaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacgga 127
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 75.8 bits (38), Expect = 3e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 221 atgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||||||||||||||| |||||||| |||||||| ||||||| |||| |
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacgagg 108
Query: 265 gaagta 270
||||||
Sbjct: 109 gaagta 114
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 151 aagtcattttagtatttcccatatttatattgatgttaatgaat 194
|||||||||||| |||||||| ||| ||||||||| ||||||||
Sbjct: 92 aagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 99 atgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||| ||| ||||||||| |||| |||||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacg 139
|||||||| ||||||||||||| || |||||||| ||||||| ||||||| ||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 16 cgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||| |||||| |||||||||||| ||||| ||||| ||||||||| ||||||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 48.1 bits (24), Expect = 7e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatt 53
|||||| |||||||||||||| ||| ||||| ||| |||||| |||||
Sbjct: 4 gtactccctccgtttcacaatgtaactcattctagcatttctcacatt 51
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||| | |||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 152
Query: 265 gaagta 270
||||||
Sbjct: 153 gaagta 158
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||||||| ||||||| || | |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||| ||| |||| | |||||| ||| || ||||| |||| |||||
Sbjct: 3 tgtactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgt 62
Query: 65 taatgaatcta 75
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| ||| ||||||| | | |||||||| |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||| | |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||||||| ||||||| || | |||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||| ||| |||| | |||||| ||| || ||||| |||| |||||
Sbjct: 160 tgtactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgt 101
Query: 65 taatgaatcta 75
|||||||||||
Sbjct: 100 taatgaatcta 90
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| ||| ||||||| | | |||||||| |||||||||
Sbjct: 93 attcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatgaaacgga 151
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||| |||| || ||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 93 attcactaacctccatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 152
Query: 265 g 265
|
Sbjct: 153 g 153
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagtaa 271
|||||||||||||||||||||| ||||||||||| |||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggagggagtaa 4
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||| |||| || |||||||||| ||||||||| |||||||||||| |||||||||
Sbjct: 70 attcactaacctctatatgaatataggaaatgctagaatgacttacattatgaaacgga 12
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||| |||| || |||||||| || ||||||||| |||||||||||| |||||||||
Sbjct: 93 attcactaacctccatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 1e-12
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||||||||| ||| ||||||||||||| ||| | ||||| |||| |||| |
Sbjct: 159 gtactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggt 100
Query: 66 aatgaatctaaacatat 82
|||||||||||||||||
Sbjct: 99 aatgaatctaaacatat 83
Score = 71.9 bits (36), Expect = 5e-12
Identities = 107/133 (80%), Gaps = 12/133 (9%)
Strand = Plus / Minus
Query: 150 taagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatat----- 204
||||||||||||| ||| |||| ||| |||| |||| ||||||||||||||||||
Sbjct: 137 taagtcattttagcattgcccacattcatatagatggtaatgaatctaaacatatgtcta 78
Query: 205 -------attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtga 257
||||||||||||| ||||| || || || |||||||||||||||||| |||
Sbjct: 77 tatctagattcattaacatctatatgcatatgggtaaggctagaatgacttacattatga 18
Query: 258 aacggaggaagta 270
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||| ||||||||||| ||||||| ||||||||||||| ||||||||||
Sbjct: 93 attcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||| |||| |||||||| || ||||||| |||||||||||| |||||||||
Sbjct: 93 attcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 218 aatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagtaact 273
||||||||||||| |||| || ||| |||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagtaact 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 218 aatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||| |||| ||| ||| ||||||||||||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 71.9 bits (36), Expect = 5e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagtaa 271
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 51 aaatgctagaatgacttacattgtgaaacggagtaagtaa 90
Score = 67.9 bits (34), Expect = 7e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 237 ctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttata 57
|||||||||||||| ||||||||| ||| ||||| ||||||||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcatttcctacatttata 39
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 51 aaatgctagaatgacttacattgtgaaacgga 82
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtat 43
|||||||||||||| ||||||||| ||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagtat 41
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 115 ctagtatgacttacattgtgaaacgga 141
|||| ||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 5e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagta 136
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 238 tagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||| ||||||||||| ||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 aatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||||||| |||||||||
Sbjct: 99 aatgctagaatgacttacattatgaaacgga 129
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 71.9 bits (36), Expect = 5e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||| |||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 111 aaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacgg 262
|||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatat 58
||||| |||||||||||||| ||||||||| ||| ||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 111 aaatgctagaatgacttacattgtgaaacgga 142
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 110 aaatgctagtatgacttacattgtgaaacgg 140
||||||||| |||||||||||||||||||||
Sbjct: 68 aaatgctagaatgacttacattgtgaaacgg 98
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttata 57
||||| |||||||||||||| ||||||||| ||| ||||| |||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 48.1 bits (24), Expect = 7e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 15 ccgtttcacaatataagtcattttagtatttcttacatttatat 58
|||||||||||| ||||||||| ||| ||||| ||||||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 233 aatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||| ||||||||||||||||||| ||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttc 46
|||||| |||||||||||||| ||||||||| ||| |||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttc 44
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 aatgctagtatgacttacattgtgaaacgga 141
|||||||| |||| |||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacgga 88
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 233 aatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||| ||||||||||||| ||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaagaagta 104
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattga 61
|||||| |||||||||||||| ||||||||| ||| ||||| || ||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 aatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||| |||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacgga 97
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 tccgtttcacaatataagtcatt 36
|||||||||||||||||||||||
Sbjct: 97 tccgtttcacaatataagtcatt 75
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||| | | ||||||||| |||||||||| | |||||||||||||||||||
Sbjct: 70 attcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacggag 11
Query: 265 gaagtaa 271
|||||||
Sbjct: 10 gaagtaa 4
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||| || || | |||||||||| | |||||||||||||||||||
Sbjct: 93 attcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| ||||| ||||| | |||||||| | | ||||||||||||||||||
Sbjct: 93 attcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| ||| |||||| | |||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 265 gaagtaa 271
| |||||
Sbjct: 153 ggagtaa 159
Score = 67.9 bits (34), Expect = 7e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| |||| | || ||||||| | ||||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 67 atgaatctaaacatatat 84
||||||||| ||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 58.0 bits (29), Expect = 7e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| |||| | || ||||||| |||| ||| |||| |||||||||||||||| |||
Sbjct: 145 tcacaatgtaagactttctagtattgcccacattcatatagatgttaatgaatctagaca 86
Query: 202 tatat 206
|||||
Sbjct: 85 tatat 81
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||| || | | |||||| | |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatatgggcagtactagaaagtcttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| || ||| |||| | | ||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||||||||| |||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 236 gctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||||||||||||||| ||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| ||||||||||||||| ||||||
Sbjct: 43 aaatgctagaatgacttacattgtggaacgga 12
Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 114 gctagtatgacttacattgtgaaacgga 141
||||| ||||||||||||||||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacgga 87
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcatt 36
|||||| |||||||||||||| |||||||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcatt 65
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||| | |||||||||| | |||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacggag 152
Query: 265 gaagtaa 271
| |||||
Sbjct: 153 ggagtaa 159
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||| || |||||||| |||||||||| | |||||||| ||||||||||
Sbjct: 70 attcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| | |||||||| | | ||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| | |||||| || |||||||||| | |||||||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacggag 11
Query: 265 gaagtaa 271
|||||||
Sbjct: 10 gaagtaa 4
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| | ||||||||| |||||||| | | ||||||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacgga 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||| | ||| ||| |||||| | |||||||||||||||||||
Sbjct: 93 attcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 46.1 bits (23), Expect = 3e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| |||| | || ||| ||| |||||||| || | |||||||||||||||| |||
Sbjct: 18 tcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaatctagaca 77
Query: 202 tat 204
|||
Sbjct: 78 tat 80
Score = 46.1 bits (23), Expect = 3e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| |||| | || ||||||| | || | |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 67 atgaatctaaa 77
|||||||||||
Sbjct: 98 atgaatctaaa 88
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||||| ||||| ||||| |||||||||| | |||||||||||||||||||
Sbjct: 70 attcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 233 aatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||| | |||||||||||||||||||| ||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||||||| ||| |||||||||||| ||||| ||||||||||||| ||||
Sbjct: 41 attcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaatggag 100
Query: 265 gaagta 270
| ||||
Sbjct: 101 ggagta 106
Score = 61.9 bits (31), Expect = 4e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaa 137
|||||||| |||||||| |||||||||||||||| |||| |||||||||||||
Sbjct: 41 attcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 241 aatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 6 gtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtt 65
|||||| |||| ||||||||| ||| ||||||||| |||| | | |||||||||||| |
Sbjct: 107 gtactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatact 48
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 47 aatgaatcta 38
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
||||||| ||| ||||||||| |||| ||||||||||||||| |||||||||||
Sbjct: 93 tcacaatgtaaatcattttagcatttttcatatttatattgatactaatgaatcta 38
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||| ||| |||||||||| |||||| ||| |||||| |||
Sbjct: 70 attcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaacagag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaac 138
||||||||||||| |||||||||||| |||||||| | |||||| ||| ||||||
Sbjct: 70 attcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaac 15
Score = 52.0 bits (26), Expect = 4e-06
Identities = 100/125 (80%), Gaps = 6/125 (4%)
Strand = Plus / Plus
Query: 146 aatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatata 205
|||||||||| || ||| ||| | |||||| |||| |||||||||||||| || |
Sbjct: 22 aatataagtctttctagcattgctcatattcatatagatgttaatgaatc------taga 75
Query: 206 ttcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagg 265
||||||| |||| |||||||| || |||||||||| | |||| ||| |||||||||||
Sbjct: 76 ttcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaacggagg 135
Query: 266 aagta 270
||||
Sbjct: 136 gagta 140
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 17 gtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaatcta 75
|||||| |||||||||| || ||| ||| || | ||| |||| ||||||||||||||||
Sbjct: 15 gtttcataatataagtctttctagcattgctcatattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| | ||| ||| || | |||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 56.0 bits (28), Expect = 3e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| |||| | |||||| ||| ||||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 67 atgaatctaaacatat 82
||||||||| ||||||
Sbjct: 98 atgaatctagacatat 83
Score = 46.1 bits (23), Expect = 3e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| |||| | |||||| ||| ||| ||| |||| |||||||||||||||| |||
Sbjct: 145 tcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaatctagaca 86
Query: 202 tat 204
|||
Sbjct: 85 tat 83
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| || | ||| ||| | | ||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||| | |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||| ||||||||||| |||||||||| | |||||||| ||||||||||| ||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| || |||||||| | | |||||||| |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 233 aatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||||| ||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||| ||||| ||||||||||||| ||||||| |||||| |||
Sbjct: 67 attcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaacagag 126
Query: 265 gaagta 270
| ||||
Sbjct: 127 ggagta 132
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 111 aatgctagtatgacttacattgtgaaacgga 141
|||||||| |||||||||||| |||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| | |||||||||| | |||||||| |||||| |||
Sbjct: 67 attcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacagag 126
Query: 265 gaagta 270
| ||||
Sbjct: 127 ggagta 132
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||| ||||||||||| | |||||||||| | |||||||| ||||| ||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
Score = 48.1 bits (24), Expect = 7e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaac 138
||||||||||||| |||||||| || | |||||||| | | |||||||| ||||||
Sbjct: 67 attcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaac 122
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| | ||| ||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 56.0 bits (28), Expect = 3e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| |||| | |||||| ||| ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 67 atgaatctaaacatat 82
||||||||| ||||||
Sbjct: 65 atgaatctagacatat 80
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| || | ||| ||| | | ||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 3e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| |||| | |||||| ||| ||| ||| |||| |||||||||||||||| |||
Sbjct: 18 tcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaatctagaca 77
Query: 202 tat 204
|||
Sbjct: 78 tat 80
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||| | |||||||| ||||||||||
Sbjct: 75 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 134
Query: 265 gaagta 270
| ||||
Sbjct: 135 ggagta 140
Score = 46.1 bits (23), Expect = 3e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 5 tgtactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgt 64
||||||| |||||||||| ||| |||| | || ||| ||| | ||||| |||| |||||
Sbjct: 142 tgtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 83
Query: 65 taatgaatcta 75
|||||||||||
Sbjct: 82 taatgaatcta 72
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||||||| || |||||||| | | |||||||| |||||||||
Sbjct: 75 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 133
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||| |||||||| ||||||||||| | |||||||||| | |||||||| ||||||||||
Sbjct: 43 attcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacggag 102
Query: 265 g 265
|
Sbjct: 103 g 103
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
||||||| |||| | || ||||||| |||||||| |||| |||||||||||||||| |||
Sbjct: 145 tcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaatctagaca 86
Query: 202 tatat 206
|||||
Sbjct: 85 tatat 81
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||||||| || ||| |||||| | |||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 265 gaagtaa 271
| |||||
Sbjct: 153 ggagtaa 159
Score = 60.0 bits (30), Expect = 2e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| |||| | || ||||||| | | ||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 67 atgaatctaaacatatat 84
||||||||| ||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| ||||||||||| ||| |||| | | ||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 203 atattcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacgg 262
||||||||||| ||| ||||||||||| || ||||||| | ||||||||||||||| |
Sbjct: 47 atattcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacag 106
Query: 263 aggaagtaa 271
|||||||||
Sbjct: 107 aggaagtaa 115
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 208 cattaacatcaatatgaatgtgaaaaatgctagaatgactt 248
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 41 cattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 208 cattaacatcaatatgaatgtgaaaaatgctagaatgactt 248
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 83 cattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 151 aagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
|||||||| ||| |||||||| ||| ||||||||||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 47
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 151 aagtcattttagtatttcccatatttatattgatgttaatgaatcta 197
|||||||| ||| |||||||| ||| ||||||||||||||| |||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 77
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 86 cattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||||||||||||| || ||||||||| |||||||
Sbjct: 41 cattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 86 cattaacatcaatatgaatatgaaaaatgctagtatgactt 126
||||||||||||||||||| || ||||||||| |||||||
Sbjct: 83 cattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 46.1 bits (23), Expect = 3e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 29 aagtcattttagtatttcttacatttatattgatgttaatgaatcta 75
|||||||| ||| ||||| ||||| ||||||||||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 47
Score = 46.1 bits (23), Expect = 3e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 29 aagtcattttagtatttcttacatttatattgatgttaatgaatcta 75
|||||||| ||| ||||| ||||| ||||||||||||||| |||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 77
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 234 atgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||| ||||||||||||||||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 231 aaaatgctagaatgacttacattgtgaaacggaggaagtaa 271
||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 50 aaaatgctagaatgacttatattgtgaaacggagtaagtaa 90
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 109 aaaatgctagtatgacttacattgtgaaacgga 141
|||||||||| |||||||| |||||||||||||
Sbjct: 50 aaaatgctagaatgacttatattgtgaaacgga 82
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattttagtattt 45
|||||||||||||||||||||||| ||| ||||
Sbjct: 83 ctccgtttcacaatataagtcattctagcattt 51
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 63.9 bits (32), Expect = 1e-09
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| ||||||||||||||||||| | || ||| ||| | |||| |||| |||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 67 atgaatctaaacatat 82
||||||||||||||||
Sbjct: 76 atgaatctaaacatat 61
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||| ||||| |||||||||| | |||| ||||||||||||||
Sbjct: 71 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 130
Query: 265 gaagta 270
| ||||
Sbjct: 131 ggagta 136
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
|||||||||||| | || ||| ||| |||| || |||| ||||||||||||||||||||
Sbjct: 123 tcacaatataagactttctagcattacccacatacatatagatgttaatgaatctaaaca 64
Query: 202 tat 204
|||
Sbjct: 63 tat 61
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgactt 248
|||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 44 attcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 78/95 (82%), Gaps = 8/95 (8%)
Strand = Plus / Plus
Query: 151 aagtcattttagtatttcccatatttatattgatgttaatgaatctaaacatatattcat 210
|||||||| ||| |||||||| ||| ||||||||| ||||||||| | |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatcga--------ttcat 52
Query: 211 taacatcaatatgaatgtgaaaaatgctagaatga 245
|| |||||||||||||||| ||||||||||||||
Sbjct: 53 tagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 48.1 bits (24), Expect = 7e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgactt 126
|||||||| ||||||||||||| || ||||||||| |||||||
Sbjct: 44 attcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 63.9 bits (32), Expect = 1e-09
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| ||||||||||||||||||| | || ||| ||| | |||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 67 atgaatctaaacatat 82
||||||||||||||||
Sbjct: 65 atgaatctaaacatat 80
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||| ||||| |||||||||| | |||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 142 tcacaatataagtcattttagtatttcccatatttatattgatgttaatgaatctaaaca 201
|||||||||||| | || ||| ||| |||| || |||| ||||||||||||||||||||
Sbjct: 18 tcacaatataagactttctagcattacccacatacatatagatgttaatgaatctaaaca 77
Query: 202 tat 204
|||
Sbjct: 78 tat 80
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||||||| ||||||||||| ||||
Sbjct: 90 aaatgctagaatgacttacattatgaaacggagggagta 128
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||| ||||||| ||||| |||||||||||| ||| ||||||| ||||||||
Sbjct: 56 atataaatgtgagaaatgttagaatgacttatattatgaaacgaaggaagta 5
Score = 48.1 bits (24), Expect = 7e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 16 cgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaatcta 75
||||||| ||||||||||||| || |||||| |||||||||| || ||| ||||||||
Sbjct: 14 cgtttcataatataagtcattctaacatttctcacatttatatggaaattagtgaatcta 73
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 110 aaatgctagtatgacttacattgtgaaacgga 141
||||||||| |||||||||||| |||||||||
Sbjct: 90 aaatgctagaatgacttacattatgaaacgga 121
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| | ||||||||| |||||||||| | ||||||||||||||| |||
Sbjct: 70 attcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacagag 11
Query: 265 gaagtaa 271
| |||||
Sbjct: 10 ggagtaa 4
Score = 54.0 bits (27), Expect = 1e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 219 atatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagtaact 273
||||| |||||| ||||||| || | |||||||||||||||||||| |||||||
Sbjct: 109 atatgtatgtgagcaatgctaaaaagtcttacattgtgaaacggagggagtaact 163
Score = 48.1 bits (24), Expect = 7e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| ||| |||||||||| |||| | || ||| ||| | ||||| || | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 67 atgaatctaaacatat 82
||||||||||||||||
Sbjct: 65 atgaatctaaacatat 80
Score = 48.1 bits (24), Expect = 7e-05
Identities = 63/75 (84%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatt--tatattgatgt 64
||||| |||||||||||||| |||| | |||||| ||| || |||| ||||| ||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 65 taatgaatctaaaca 79
|||||||||||||||
Sbjct: 100 taatgaatctaaaca 86
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 182 gatgttaatgaatctaaacatat 204
|||||||||||||||||||||||
Sbjct: 58 gatgttaatgaatctaaacatat 80
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 208 cattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaa 267
|||||||||| |||||||||| || | |||||||| | |||||||| ||||||||||| |
Sbjct: 67 cattaacatctatatgaatgtaaacagtgctagaaagtcttacattatgaaacggaggga 8
Query: 268 gta 270
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||| ||||||||||| |||||||||| | ||||||||||||||||||
Sbjct: 61 attcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggat 120
Query: 265 gaagta 270
||||||
Sbjct: 121 gaagta 126
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 224 aatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagtaa 271
|||||||| |||||||||| | |||||||| ||||| |||||||||||
Sbjct: 51 aatgtgaacaatgctagaaagtcttacattatgaaatggaggaagtaa 4
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 233 aatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||| | |||||||||||||||||||||||||
Sbjct: 102 aatgctagaaagtcttacattgtgaaacggaggaagta 139
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 233 aatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||| | |||| ||||||||||||||||||||
Sbjct: 42 aatgctagaaaggcttagattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||||| || ||||| || ||| |||||||||| | |||||||||||||||||||
Sbjct: 70 attcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| | |||||| || ||||||| || | |||||||||||||||||||
Sbjct: 93 attcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtgaaacggag 152
Query: 265 gaagta 270
||||||
Sbjct: 153 gaagta 158
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
|||||||||| || ||||| |||||| |||||||| | | ||||||||||||||||||
Sbjct: 70 attcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| | ||||||||| ||||||| | | ||||||||||||||||||
Sbjct: 93 attcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||| ||||||||||| |||| ||||| | |||||||||||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacggag 152
Query: 265 gaagta 270
| ||||
Sbjct: 153 ggagta 158
Score = 52.0 bits (26), Expect = 4e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
|||| |||| ||||||||||| ||||||| || | |||||||| ||||||||||||||
Sbjct: 66 attagcatctatatgaatgtgggtaatgctataaagtcttacattatgaaacggaggaag 7
Query: 269 ta 270
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||| | |||| | | ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||| | |||| | | ||||||||||
Sbjct: 95 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 154
Query: 265 gaagta 270
| ||||
Sbjct: 155 ggagta 160
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||| ||| | || |||||| | ||||||| || | |||||||||||||||||||
Sbjct: 91 attcattaatatctaaataaatgtggacaatgctaaaaagtcttacattgtgaaacggag 150
Query: 265 gaagta 270
||||||
Sbjct: 151 gaagta 156
Score = 46.1 bits (23), Expect = 3e-04
Identities = 56/66 (84%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||| ||||| | |||| ||||| | |||||||| ||||||||||
Sbjct: 68 attcattaacatctatat--atgtggacaatggtagaaagtcttacattatgaaacggag 11
Query: 265 gaagta 270
| ||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 225 atgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||| ||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 50 atgtggaaaatactagaatgacttacattatgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 214 catcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||| ||| || ||||||||||||||||||| ||| ||||| ||||| ||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 146 aatataagtcattttagtatttcccatatttatattgatg 185
||||||||||||| ||| |||| |||||||||||||||||
Sbjct: 122 aatataagtcattctagcattttccatatttatattgatg 83
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 171 atatttatattgatgttaatgaat 194
||||||||||||||||||||||||
Sbjct: 55 atatttatattgatgttaatgaat 78
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| | ||||||||| |||||||||| | ||| |||| ||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||| | |||| | | ||||||||||
Sbjct: 61 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 120
Query: 265 gaagta 270
||||||
Sbjct: 121 gaagta 126
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 209 attaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 268
||||||||| ||||||||||| | |||||||||| | |||||||| ||||| ||||| ||
Sbjct: 66 attaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaatggagggag 7
Query: 269 ta 270
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattttagtatttcttacatttatattgatgttaatgaat 72
|||||||||||||| |||| | || ||||||| | | |||| || | |||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttatagtattacctccattcatttagatgttaatgaat 70
Query: 73 ctaaacatat 82
||||||||||
Sbjct: 71 ctaaacatat 80
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 246 cttacattgtgaaacggaggaagtaa 271
||||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggaggaagtaa 4
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 233 aatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||| | |||||||||||||||||||| ||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 182 gatgttaatgaatctaaacatat 204
|||||||||||||||||||||||
Sbjct: 58 gatgttaatgaatctaaacatat 80
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| | ||||||||| || |||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| ||| ||||||||||| |||||||||| | |||||||| ||||||||||
Sbjct: 93 attcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 152
Query: 265 gaagtaact 273
| |||||||
Sbjct: 153 ggagtaact 161
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| | || |||||| | ||| |||||| | |||||||||||||||||||
Sbjct: 53 attcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacggag 112
Query: 265 g 265
|
Sbjct: 113 g 113
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 233 aatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||| | |||||||||||||||||||| ||||
Sbjct: 42 aatgctagaaagccttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 58.0 bits (29), Expect = 7e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 214 catcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||| ||||||||||| || ||||||| | |||||||||||||||||||||||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 214 catcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||| ||||||||||| |||||||||| |||||||||||||||||||| ||||
Sbjct: 64 catctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 58.0 bits (29), Expect = 7e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 177 atattgatgttaatgaatctaaacatatattcattaacatcaatatgaatgtg 229
|||| ||||||||||||||||| |||| ||||||||||||| ||||| |||||
Sbjct: 54 atatagatgttaatgaatctaa-catagattcattaacatctatatgtatgtg 3
Score = 54.0 bits (27), Expect = 1e-06
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 55 atattgatgttaatgaatctaaacatatattcattaacatcaatatg 101
|||| ||||||||||||||||| |||| ||||||||||||| |||||
Sbjct: 54 atatagatgttaatgaatctaa-catagattcattaacatctatatg 9
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 56.0 bits (28), Expect = 3e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| |||| ||| || | |||||||||| | |||||||| ||||||||||
Sbjct: 72 attcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaacggag 131
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 169 ccatatttatattgatgttaatgaatctaaacata 203
|||||||||||| |||||||||||||||| |||||
Sbjct: 97 ccatatttatatagatgttaatgaatctagacata 63
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 83 attcattaacatcaatatgaatatgaaaaatgctagtatgacttacattgtgaaacgga 141
||||||||||||| |||| |||||| | |||||||| | | |||||||| |||||||||
Sbjct: 72 attcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaacgga 130
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 51 atttatattgatgttaatgaatctaaacata 81
|||||||| |||||||||||||||| |||||
Sbjct: 93 atttatatagatgttaatgaatctagacata 63
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 56.0 bits (28), Expect = 3e-07
Identities = 69/83 (83%), Gaps = 6/83 (7%)
Strand = Plus / Plus
Query: 164 atttcccatatttatattgatgttaatgaatctaaacatat------attcattaacatc 217
|||||||| ||| |||||||||| |||||||||| |||| | ||||||| |||||
Sbjct: 6 atttcccacattcatattgatgtcaatgaatctagacatctgtctagattcattgacatc 65
Query: 218 aatatgaatgtgaaaaatgctag 240
|||||||||||| |||||||||
Sbjct: 66 aatatgaatgtgggaaatgctag 88
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 56.0 bits (28), Expect = 3e-07
Identities = 73/89 (82%), Gaps = 8/89 (8%)
Strand = Plus / Plus
Query: 182 gatgttaatgaatctaaacatatattcattaacatcaatatgaatgtgaaaaatgctaga 241
|||||||||||||||||||||||| |||| | |||||||||| |||||||||
Sbjct: 58 gatgttaatgaatctaaacatata--------catctaaatgaatgtgagtaatgctaga 109
Query: 242 atgacttacattgtgaaacggaggaagta 270
| | |||| |||||| |||||||||||||
Sbjct: 110 aagtcttatattgtggaacggaggaagta 138
Score = 50.1 bits (25), Expect = 2e-05
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtatttcttacatttatattgatgtta 66
||||| |||||||||||||| |||| || ||| ||| | |||| || || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 67 atgaatctaaacatata 83
|||||||||||||||||
Sbjct: 65 atgaatctaaacatata 81
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 231 aaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 44 aaaatgctagaatgacttatattatgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 232 aaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 108 aaatgctagaatgacttacattatgaaacgaagggagta 146
Score = 46.1 bits (23), Expect = 3e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 7 tactctctccgtttcacaatataagtcattttagtattt 45
||||| |||||||||| ||||||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattt 43
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatg 244
||||||||||| | ||||||||||| ||||||||||||||
Sbjct: 40 attcattaacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 212 aacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
|||||| ||||||||||| | |||||||||| | |||| | | ||||||||||||||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagta 137
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 236 gctagaatgacttacattgtgaaacggaggaagta 270
||||||| |||||||||| ||||||||||||||||
Sbjct: 39 gctagaaagacttacattatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 233 aatgctagaatgacttacattgtgaaacggaggaagta 270
|||||||||| |||||||||| ||||||||||| ||||
Sbjct: 46 aatgctagaaagacttacattatgaaacggagggagta 83
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| | | |||||||| | |||| | ||||||||||
Sbjct: 74 attcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacggag 133
Query: 265 gaagtaa 271
|||||||
Sbjct: 134 gaagtaa 140
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||| | |||| | | |||||| |||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactgag 126
Query: 265 gaagta 270
||||||
Sbjct: 127 gaagta 132
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 49 acatttatattgatgttaatgaatctaaaca 79
||||| |||| ||||||||||||||||||||
Sbjct: 90 acattcatatagatgttaatgaatctaaaca 60
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 213 acatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 270
||||| ||||||||||| |||||||||| | |||||||| ||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| ||||||| || | ||||||| ||||||||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaacggag 136
Query: 265 gaagta 270
| ||||
Sbjct: 137 ggagta 142
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||| |||||||| ||||||||||| |||||||||| | |||| | | ||||||||||
Sbjct: 70 attcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 265 gaagta 270
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
|||||||| |||| ||||||||||| |||||||||| | |||| | | ||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 152
Query: 265 gaagta 270
||||||
Sbjct: 153 gaagta 158
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 205 attcattaacatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 264
||||||||||||| ||||||||||| |||||||||| | |||| | | |||||| |||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactgag 126
Query: 265 gaagta 270
||||||
Sbjct: 127 gaagta 132
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 49 acatttatattgatgttaatgaatctaaaca 79
||||| |||| ||||||||||||||||||||
Sbjct: 90 acattcatatagatgttaatgaatctaaaca 60
