miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 127 bits (64), Expect = 2e-29
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 124 cattgcccacattcatatagatatcaatgaatctaaacatatatgtgtgtctagattcat 65
Query: 61 taacatcaatatgaatgtgggcaa 84
|||||| ||||||||||||||||
Sbjct: 64 taacatatatatgaatgtgggcaa 41
Score = 71.9 bits (36), Expect = 1e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||||||||| || |||||||||||| ||| | || | ||| |||||||||| | ||
Sbjct: 45 ccacattcatatatatgttaatgaatctagacacacatatatgtttagattcattgatat 104
Query: 67 caatatgaatgtgggcaatg 86
| ||||||||||||||||||
Sbjct: 105 ctatatgaatgtgggcaatg 124
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 123 bits (62), Expect = 4e-28
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||||||||||||||||| || |||||||||||| |||| |||||||| ||||||||||
Sbjct: 15 cattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcctagattcat 74
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||||| ||||||||||||||||||
Sbjct: 75 taacatctatatgaatgtgggcaatg 100
Score = 75.8 bits (38), Expect = 8e-14
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| |||||||||||| || | || |||||||||||||
Sbjct: 100 cattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctagattcat 41
Query: 61 taacatcaatatgaatgtgggcaatg 86
|||||| |||||||||||| |||||
Sbjct: 40 taacatatatatgaatgtggacaatg 15
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 4e-28
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| |||||||||||| | ||||||||||||||||||||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaatctagaaatatatgtgtgtctagattcat 98
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||||| ||||||||||| ||||||
Sbjct: 99 taacatctatatgaatgtgagcaatg 124
Score = 93.7 bits (47), Expect = 3e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||||||| |||||||||||| ||| | || | | ||||||||||||||||||
Sbjct: 117 cacattcatatagatgttaatgaatctagacacacatatatttctagattcattaacatc 58
Query: 68 aatatgaatgtgggcaatg 86
||||||||||||||||||
Sbjct: 57 tatatgaatgtgggcaatg 39
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 6e-27
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||||| |||||||||||||| |||||||||||| |||||||||||||| |||||||||
Sbjct: 39 cattgtctacattcatatagatgttaatgaatctagacatatatgtgtgtttagattcat 98
Query: 61 taacatcaatatgaatgtgg 80
||||||| ||||||||||||
Sbjct: 99 taacatctatatgaatgtgg 118
Score = 103 bits (52), Expect = 4e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 3 ttgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatta 62
|||||||||||||||||||| |||||||||||||||| | || | |||||||||||||||
Sbjct: 122 ttgtccacattcatatagatgttaatgaatctaaacacacatatatgtctagattcatta 63
Query: 63 acatcaatatgaatgt 78
||||| ||||||||||
Sbjct: 62 acatctatatgaatgt 47
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 117 bits (59), Expect = 2e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| |||||||||||| | ||||||||||||||||||||||
Sbjct: 124 cattgcccacattcatatagatgttaatgaatctagaaatatatgtgtgtctagattcat 65
Query: 61 taacatcaatatgaatgtg 79
||||||| |||||||||||
Sbjct: 64 taacatctatatgaatgtg 46
Score = 93.7 bits (47), Expect = 3e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||||||| |||||||||||| ||| | || | | ||||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacacacatatatttctagattcattaacatc 105
Query: 68 aatatgaatgtgggcaatg 86
||||||||||||||||||
Sbjct: 106 tatatgaatgtgggcaatg 124
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 9e-26
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||||||||| |||||| |||||||||||| | ||||||||||||||||||||||
Sbjct: 124 cattgcccacattcacatagatgttaatgaatctagatatatatgtgtgtctagattcat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||||| ||||||||||| ||||||
Sbjct: 64 taacatctatatgaatgtgagcaatg 39
Score = 85.7 bits (43), Expect = 8e-17
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||||||| |||||||||||| ||| | || | | ||||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacacacatatatatctagattcattaacatc 105
Query: 68 aatatgaatgtgggcaatg 86
|| |||||||||||||||
Sbjct: 106 tatgtgaatgtgggcaatg 124
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 4e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 2 attgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatt 61
|||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||
Sbjct: 40 attgcccacattcatatagatgttaatgaatctagacatatatatgtgtctagattcatt 99
Query: 62 aacatcaatatgaatgtgggcaatg 86
|||||| |||||||| || ||||||
Sbjct: 100 aacatctatatgaatatgagcaatg 124
Score = 101 bits (51), Expect = 1e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||||||| |||||||||||| ||| |||| | |||||||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacacatatatatgtctagattcattaacatctat 55
Query: 71 atgaatgtgggcaat 85
|||||||||||||||
Sbjct: 54 atgaatgtgggcaat 40
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 2e-23
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 2 attgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatt 61
|||| |||||||||||||||| |||||||||||| ||||||||| ||||||| |||||||
Sbjct: 123 attgcccacattcatatagatgttaatgaatctagacatatatgcgtgtctaaattcatt 64
Query: 62 aacatcaatatgaatgtgggca 83
|||||| |||||||| ||||||
Sbjct: 63 aacatctatatgaatatgggca 42
Score = 77.8 bits (39), Expect = 2e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||||||| ||||||||| || ||| || | |||||||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatctat 108
Query: 71 atgaatgtgggcaat 85
|||||||||||||||
Sbjct: 109 atgaatgtgggcaat 123
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 107 bits (54), Expect = 2e-23
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||||||||||||| || |||||||||||| | |||||| |||| ||||||||||
Sbjct: 15 cattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctagattcat 74
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||||| ||||||||||||||||||
Sbjct: 75 taacatctatatgaatgtgggcaatg 100
Score = 91.7 bits (46), Expect = 1e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| |||||||||||| || |||| | | |||||||||||
Sbjct: 100 cattgcccacattcatatagatgttaatgaatctaggcacatatatatatctagattcat 41
Query: 61 taacatcaatatgaatgtgggcaatg 86
|||||| ||||||||||||||||||
Sbjct: 40 taacatatatatgaatgtgggcaatg 15
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 107 bits (54), Expect = 2e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 68 aatatgaatgtggg 81
|||||||||||||
Sbjct: 33 tatatgaatgtggg 20
Score = 89.7 bits (45), Expect = 5e-18
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||||||| |||||||||||| ||| |||| | |||||||||||||| ||||
Sbjct: 21 ccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttacat 80
Query: 67 caatatgaatgtg 79
| |||||||||||
Sbjct: 81 ctatatgaatgtg 93
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 105 bits (53), Expect = 9e-23
Identities = 80/88 (90%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtcta--gattc 58
||||| |||||||||||||||| |||||||||||| | |||||||||||| || |||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaatctatatatatatgtgtgtgtatagattc 98
Query: 59 attaacatcaatatgaatgtgggcaatg 86
||||||||| ||||||||||||||||||
Sbjct: 99 attaacatctatatgaatgtgggcaatg 126
Score = 73.8 bits (37), Expect = 3e-13
Identities = 76/88 (86%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatata--tgtgtgtctagattc 58
||||| |||||||||||||||| |||||||||||| ||| | | | | | | |||||||
Sbjct: 126 cattgcccacattcatatagatgttaatgaatctatacacacacatatatatatagattc 67
Query: 59 attaacatcaatatgaatgtgggcaatg 86
||||||||| ||||||||||||||||||
Sbjct: 66 attaacatctatatgaatgtgggcaatg 39
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 103 bits (52), Expect = 4e-22
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| ||||||||||||||||||| | |||| ||||||||||||||||
Sbjct: 117 ccacattcatattgatgttaatgaatctaaacatatgtatgtg-ctagattcattaacat 59
Query: 67 caatatgaatgtgggcaatg 86
||||||||||||||| ||||
Sbjct: 58 caatatgaatgtgggaaatg 39
Score = 71.9 bits (36), Expect = 1e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| || ||| | ||| |||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag-cacatacatatgtttagattcattaacat 103
Query: 67 caatatgaatgtgggcaatg 86
||||||||||||||| ||||
Sbjct: 104 caatatgaatgtgggaaatg 123
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 4e-22
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||||
Sbjct: 39 cattgtccacattcatatagatgctaatgaatctaggcatatatataagtctagattcat 98
Query: 61 taacatcaatatgaatgtgg 80
||||||||||||||||||||
Sbjct: 99 taacatcaatatgaatgtgg 118
Score = 83.8 bits (42), Expect = 3e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||||||||| ||| |||||||||||| || ||||| | || ||||||||||
Sbjct: 124 cattttccacattcatattgatgttaatgaatctagacttatatatatgcctagattcat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
|| |||| |||||||||||| |||||
Sbjct: 64 tagcatctatatgaatgtggacaatg 39
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 103 bits (52), Expect = 4e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||||| | |||| | |||||||||||||||||||
Sbjct: 92 ccacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacat 33
Query: 67 caatatgaatgtgggcaatg 86
||||||||||||||| ||||
Sbjct: 32 caatatgaatgtgggaaatg 13
Score = 95.6 bits (48), Expect = 9e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| |||||||| | | | |||||||||||||||
Sbjct: 19 ccacattcatattgatgttaatgaatctagacatatatatctatttagattcattaacat 78
Query: 67 caatatgaatgtgggcaatg 86
||||||||||||||| ||||
Sbjct: 79 caatatgaatgtgggaaatg 98
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 101 bits (51), Expect = 1e-21
Identities = 78/86 (90%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 2 attgtccacattcatatagattttaatgaatctaaacata--tatgtgtgtctagattca 59
|||| |||||||||||||||| |||||||||||| ||| | ||||||||| ||||||||
Sbjct: 40 attgcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattca 99
Query: 60 ttaacatcaatatgaatgtgggcaat 85
|||||||| |||||||||||||||||
Sbjct: 100 ttaacatctatatgaatgtgggcaat 125
Score = 101 bits (51), Expect = 1e-21
Identities = 78/86 (90%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 2 attgtccacattcatatagattttaatgaatctaaacata--tatgtgtgtctagattca 59
|||| |||||||||||||||| |||||||||||| ||| | ||||||||| ||||||||
Sbjct: 125 attgcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattca 66
Query: 60 ttaacatcaatatgaatgtgggcaat 85
|||||||| |||||||||||||||||
Sbjct: 65 ttaacatctatatgaatgtgggcaat 40
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 99.6 bits (50), Expect = 6e-21
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 103 cattgcccacattcatatagatgcaaatgaatctagacatatatgtgtgcctagattcat 44
Query: 61 taacatcaatatgaatgtgggcaatg 86
|| ||| ||||||||||||||||||
Sbjct: 43 tagcatagatatgaatgtgggcaatg 18
Score = 60.0 bits (30), Expect = 5e-09
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||| || ||||||||||| || | || | |||||||||||||
Sbjct: 18 cattgcccacattcatatctatgctaatgaatctaggcacacatatatgtctagattcat 77
Query: 61 taacatcaatatgaatgtgggcaatg 86
| |||| ||||||||||||||||||
Sbjct: 78 ttgcatctatatgaatgtgggcaatg 103
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 99.6 bits (50), Expect = 6e-21
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| ||||||||||| |||||||| ||||| ||| |||||
Sbjct: 124 cattgcccacattcatatagatgctaatgaatctagacatatatatgtgtataggttcat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||||| |||||| |||||||||||
Sbjct: 64 taacatctatatgattgtgggcaatg 39
Score = 91.7 bits (46), Expect = 1e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||||| |||||||||| |||||||| ||| ||| |||| | |||||||||||||
Sbjct: 39 cattgcccacaatcatatagatgttaatgaacctatacacatatatatgtctagattcat 98
Query: 61 taacatcaatatgaatgtgggcaatg 86
|| |||| ||||||||||||||||||
Sbjct: 99 tagcatctatatgaatgtgggcaatg 124
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 6e-21
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 2 attgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatt 61
|||| ||| |||||||||||| |||||||||||| ||||||||| ||||||| |||||||
Sbjct: 123 attgcccatattcatatagatgttaatgaatctagacatatatgcgtgtctaaattcatt 64
Query: 62 aacatcaatatgaatgtgggca 83
|||||| |||||||| ||||||
Sbjct: 63 aacatctatatgaatatgggca 42
Score = 69.9 bits (35), Expect = 5e-12
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||||||| ||||||||| || ||| || | |||||||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatctat 108
Query: 71 atgaatgtgggcaat 85
|||||| ||||||||
Sbjct: 109 atgaatatgggcaat 123
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 6e-21
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| |||| |||||||| ||| |||||||||||| |||||||| | | |||||||||||
Sbjct: 39 cattttccatattcatattgatgttaatgaatctatacatatatatttatctagattcat 98
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||||||||||||||||||| ||||
Sbjct: 99 taacatcaatatgaatgtgggaaatg 124
Score = 75.8 bits (38), Expect = 8e-14
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| | | |||| | ||| |||||||||||||||
Sbjct: 118 ccacattcatattgatgttaatgaatctagataaatatatatgtatagattcattaacat 59
Query: 67 caatatgaat 76
||||||||||
Sbjct: 58 caatatgaat 49
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 99.6 bits (50), Expect = 6e-21
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| |||||||||||| ||||||||| || ||||||||||
Sbjct: 100 cattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctagattcat 41
Query: 61 taacatcaatatgaatgtgggcaatg 86
|||||| |||||||| |||||||||
Sbjct: 40 taacatatatatgaatatgggcaatg 15
Score = 83.8 bits (42), Expect = 3e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||| ||||||||| || |||||||||||| |||| || | || ||||||||||
Sbjct: 15 cattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctagattcat 74
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||||| ||||||||||||||||||
Sbjct: 75 taacatctatatgaatgtgggcaatg 100
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 6e-21
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||||||||| ||| |||||||||||||| | |||| | |||||||||||||
Sbjct: 124 cattttccacattcatattgatattaatgaatctaaatagatatatatgtctagattcat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
|||||||| |||||||||||| ||||
Sbjct: 64 taacatcactatgaatgtgggaaatg 39
Score = 75.8 bits (38), Expect = 8e-14
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||||||| ||| |||||||||||| |||||||| | | | |||||||||||| ||
Sbjct: 45 ccacattcatagtgatgttaatgaatctagacatatatatctatttagattcattaatat 104
Query: 67 caatatgaatgtgg 80
||||||||||||||
Sbjct: 105 caatatgaatgtgg 118
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 97.6 bits (49), Expect = 2e-20
Identities = 70/76 (92%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||| ||
Sbjct: 112 attcatctagatgttaatgaatctagacatat--gtgtgtctagattcattaacatctat 55
Query: 71 atgaatgtgggcaatg 86
||||||||||||||||
Sbjct: 54 atgaatgtgggcaatg 39
Score = 65.9 bits (33), Expect = 8e-11
Identities = 66/76 (86%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| |||||||||||| ||| | | | |||||||||||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaatctagacacaca--tatgtctagattcat 96
Query: 61 taacatcaatatgaat 76
||||||| | ||||||
Sbjct: 97 taacatctagatgaat 112
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 97.6 bits (49), Expect = 2e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| |||||||| | | |||||||||||||||||
Sbjct: 92 ccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaacat 33
Query: 67 caatatgaatgtg 79
|||||||||||||
Sbjct: 32 caatatgaatgtg 20
Score = 93.7 bits (47), Expect = 3e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||| ||| |||||||||||| | | |||| | ||||||||||||||||||||
Sbjct: 20 cacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatc 79
Query: 68 aatatgaatgtgggcaatg 86
|||||||||||||| ||||
Sbjct: 80 aatatgaatgtgggaaatg 98
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 9e-20
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 2 attgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatt 61
||||||||||||||||||||| |||||||||||| |||||| | | | ||||| ||||||
Sbjct: 123 attgtccacattcatatagatgttaatgaatctagacatatgtatatatctaggttcatt 64
Query: 62 aacatcaatatgaatgtgggcaat 85
|||||| |||||||| ||||||||
Sbjct: 63 aacatctatatgaatatgggcaat 40
Score = 79.8 bits (40), Expect = 5e-15
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 2 attgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatt 61
|||| ||| |||||||||||| |||||||| ||| | ||||| | ||||||||||||||
Sbjct: 40 attgcccatattcatatagatgttaatgaacctagatatatacatatgtctagattcatt 99
Query: 62 aacatcaatatgaatgtgggcaat 85
|||||| |||||||||||| ||||
Sbjct: 100 aacatctatatgaatgtggacaat 123
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 9e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||| |||
Sbjct: 45 ccacatttatatagatactaatgaatctagacatatatgtgtgcctagattcattagcat 104
Query: 67 caatatgaatgtgggcaatg 86
||||||||||||||||||
Sbjct: 105 atatatgaatgtgggcaatg 124
Score = 56.0 bits (28), Expect = 7e-08
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||||||||||||| || ||||||||||| || | || | |||||||||||||
Sbjct: 124 cattgcccacattcatatatatgctaatgaatctaggcacacatatatgtctagattcat 65
Query: 61 taacatcaatatgaatgtgggcaa 84
|| ||| |||| |||||||||||
Sbjct: 64 tagtatctatataaatgtgggcaa 41
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 95.6 bits (48), Expect = 9e-20
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 6 tccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaaca 65
||||||||||||| ||| |||||||||||| |||||||| | | |||||||||||||| |
Sbjct: 118 tccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaata 59
Query: 66 tcaatatgaatgtggg 81
||||||||||||||||
Sbjct: 58 tcaatatgaatgtggg 43
Score = 91.7 bits (46), Expect = 1e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| | | |||| | |||||||||||||||||||
Sbjct: 44 ccacattcatattgatattaatgaatctagatagatatatatgtctagattcattaacat 103
Query: 67 caatatgaatgtgg 80
||||||||||||||
Sbjct: 104 caatatgaatgtgg 117
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 9e-20
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 2 attgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatt 61
||||||||||||||||||||| |||||||||||| |||||| | | | ||||| ||||||
Sbjct: 40 attgtccacattcatatagatgttaatgaatctagacatatgtatatatctaggttcatt 99
Query: 62 aacatcaatatgaatgtgggcaat 85
|||||| |||||||| ||||||||
Sbjct: 100 aacatctatatgaatatgggcaat 123
Score = 79.8 bits (40), Expect = 5e-15
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 2 attgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatt 61
|||| ||| |||||||||||| |||||||| ||| | ||||| | ||||||||||||||
Sbjct: 123 attgcccatattcatatagatgttaatgaacctagatatatacatatgtctagattcatt 64
Query: 62 aacatcaatatgaatgtgggcaat 85
|||||| |||||||||||| ||||
Sbjct: 63 aacatctatatgaatgtggacaat 40
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 95.6 bits (48), Expect = 9e-20
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| ||||||||| || |||||||| | | |||||||||||||||||
Sbjct: 118 ccacattcatattgatgttaatgaatgtagacatatatatctatctagattcattaacat 59
Query: 67 caatatgaatgtgggcaatg 86
||||||||||||||| ||||
Sbjct: 58 caatatgaatgtgggaaatg 39
Score = 85.7 bits (43), Expect = 8e-17
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| | | |||| | |||||| ||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctagatagatatatatgtctacattcattaacat 104
Query: 67 caatatgaatgtggg 81
|||||||||||||||
Sbjct: 105 caatatgaatgtggg 119
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 9e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| |||||||| | | |||||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaacat 104
Query: 67 caatatgaatgtgggcaatg 86
|||||||||||||| ||||
Sbjct: 105 taatatgaatgtgggaaatg 124
Score = 87.7 bits (44), Expect = 2e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| || |||||||||||| | | |||| | |||||||||||||||||||
Sbjct: 118 ccacattcatattaatgttaatgaatctagatagatatatatgtctagattcattaacat 59
Query: 67 caatatgaatgtgggcaatg 86
||||||||||||||| ||||
Sbjct: 58 caatatgaatgtgggtaatg 39
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 3e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||| |||||||||||||||| | | |||| | |||||||||||||||| |||
Sbjct: 117 cacattcatattgattttaatgaatctagatagatatatatgtctagattcattaatatc 58
Query: 68 aatatgaatgtgggcaatg 86
|||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatg 39
Score = 89.7 bits (45), Expect = 5e-18
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| |||||||| | | |||||||||||||| ||
Sbjct: 45 ccacattcatattgatattaatgaatctagacatatatatctatctagattcattaaaat 104
Query: 67 caatatgaatgtg 79
|||||||||||||
Sbjct: 105 caatatgaatgtg 117
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 1e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||| ||||||||| ||||||||| || | ||| ||||||||||||||||||
Sbjct: 39 cattgcccacatacatatagatgttaatgaatttagatatagatgtgtgtctagattcat 98
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||||| |||||||| |||| ||||
Sbjct: 99 taacatctatatgaatatgggtaatg 124
Score = 71.9 bits (36), Expect = 1e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||||||| |||||||||||| ||| | || | | |||| ||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatctat 55
Query: 71 atgaatgtgggcaatg 86
||| ||||||||||||
Sbjct: 54 atgtatgtgggcaatg 39
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 1e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||||||||||||| || ||||| |||||| |||||||| |||| | ||||||||
Sbjct: 39 cattgcccacattcatatatatgttaataaatctagacatatatatgtgccaagattcat 98
Query: 61 taacatcaatatgaatgtgggcaatg 86
|||||| ||||||||||||||||||
Sbjct: 99 taacatatatatgaatgtgggcaatg 124
Score = 75.8 bits (38), Expect = 8e-14
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||||||||||||| || ||||||||||| || |||| | |||||||||| ||
Sbjct: 124 cattgcccacattcatatatatgttaatgaatcttggcacatatatatgtctagatttat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
|||||| ||||||||||||||||||
Sbjct: 64 taacatatatatgaatgtgggcaatg 39
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 5e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 2 attgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatt 61
|||||||| ||||||||||| | |||||||||||||| |||| | ||||||||||||||
Sbjct: 123 attgtccatcttcatatagatgtcaatgaatctaaacacatatatatgtctagattcatt 64
Query: 62 aacatcaatatgaatgtgggcaatg 86
|||| ||||||||||||||||||
Sbjct: 63 gacatatatatgaatgtgggcaatg 39
Score = 77.8 bits (39), Expect = 2e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||||||||||||| || | |||||||||| |||||||| ||||| |||||||||
Sbjct: 39 cattgcccacattcatatatatgtcaatgaatctagacatatatatgtgtttagattcat 98
Query: 61 taacatcaatatgaa 75
| ||||| |||||||
Sbjct: 99 tgacatctatatgaa 113
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 89.7 bits (45), Expect = 5e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||||||| || ||||||||||| |||||| |||||||||||||||||||
Sbjct: 118 ccacattcatatagatgttgatgaatctaaatatatatagatgtctagattcattaacat 59
Query: 67 caatatgaatgtg 79
| |||||||||||
Sbjct: 58 ctatatgaatgtg 46
Score = 77.8 bits (39), Expect = 2e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||||||| |||||||||||| |||| ||| | | | ||||||||| ||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacatctatatatatttagattcatcaacatc 105
Query: 68 aatatgaatgtgggcaatg 86
||||||||||||| ||||
Sbjct: 106 tatatgaatgtgggaaatg 124
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 2e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| | | |||| | |||||||||||||||||||
Sbjct: 118 ccacattcatattgatattaatgaatctagatagatatatatgtctagattcattaacat 59
Query: 67 caatatgaatgtgggcaatg 86
|||||| |||||||| ||||
Sbjct: 58 caatataaatgtgggaaatg 39
Score = 87.7 bits (44), Expect = 2e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||| |||| ||| |||||||||||| |||||||| | | |||||||||||||| ||
Sbjct: 45 ccacatttatattgatgttaatgaatctagacatatatatctatctagattcattaatat 104
Query: 67 caatatgaatgtgggcaatg 86
||||||||||||||| ||||
Sbjct: 105 caatatgaatgtgggaaatg 124
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 2e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| ||||||||||| |||||||| | | ||||||||||||||||
Sbjct: 118 ccacattcatattgatggtaatgaatctagacatatatatctatctagattcattaacaa 59
Query: 67 caatatgaatgtgggcaatg 86
||||||||||||||| ||||
Sbjct: 58 caatatgaatgtgggaaatg 39
Score = 79.8 bits (40), Expect = 5e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| | | |||||||||||| | | |||| | ||||||||||||||| |||
Sbjct: 45 ccacattcatattgttgttaatgaatctagatagatatatatgtctagattcattaccat 104
Query: 67 caatatgaatgtgggcaatg 86
||||||||||||||| ||||
Sbjct: 105 caatatgaatgtgggaaatg 124
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 8e-17
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||| ||| |||||||||||||| | |||| | |||||||||||||||||| |
Sbjct: 117 cacattcatattgatattaatgaatctaaatagatatatatgtctagattcattaacacc 58
Query: 68 aatatgaatgtgggcaatg 86
||||| |||||||| ||||
Sbjct: 57 aatataaatgtgggaaatg 39
Score = 65.9 bits (33), Expect = 8e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||| |||| | | |||||||||||| |||||||| | | | |||||||||||| ||
Sbjct: 45 ccacatttatattggtgttaatgaatctagacatatatatctatttagattcattaatat 104
Query: 67 caatatgaatgtg 79
|||||||||||||
Sbjct: 105 caatatgaatgtg 117
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 85.7 bits (43), Expect = 8e-17
Identities = 70/78 (89%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 9 acattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatca 68
|||||||||| ||| ||||||||| || |||||||| ||| ||||||||||||||||||
Sbjct: 47 acattcatattgatgttaatgaatgtagacatatatatgt--ctagattcattaacatca 104
Query: 69 atatgaatgtgggcaatg 86
||||||||||||| ||||
Sbjct: 105 atatgaatgtgggaaatg 122
Score = 81.8 bits (41), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| |||||||| ||| ||| ||||||||||||
Sbjct: 116 ccacattcatattgatgttaatgaatctagacatatatatgt--ctacattcattaacat 59
Query: 67 caatatgaatgt 78
||||||||||||
Sbjct: 58 caatatgaatgt 47
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 3e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| | |||||| | | |||||||||||||||||
Sbjct: 118 ccacattcatattgatattaatgaatctagatatatatatttatctagattcattaacat 59
Query: 67 caatatgaatgtgg 80
|||||||||||||
Sbjct: 58 taatatgaatgtgg 45
Score = 73.8 bits (37), Expect = 3e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 6 tccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaaca 65
||||||||||||| || |||||||||||| | | |||| | | |||||||||||||| |
Sbjct: 44 tccacattcatattaatgttaatgaatctagataaatatatatatctagattcattaata 103
Query: 66 tcaatatgaatgtgggcaatg 86
|||||||||||||||| ||||
Sbjct: 104 tcaatatgaatgtgggaaatg 124
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 3e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| |||||||| | | |||||||||||||||||
Sbjct: 118 ccacattcatattgatattaatgaatctagacatatatatctatctagattcattaacat 59
Query: 67 caatat 72
||||||
Sbjct: 58 caatat 53
Score = 69.9 bits (35), Expect = 5e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 15 atatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatga 74
|||| ||| |||||||||||| | | |||| | |||||||||||||||| ||||||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 75 atgtggg 81
|||||||
Sbjct: 113 atgtggg 119
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 3e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||| |||||||| ||||||||| || | ||| ||||||||||||||||||
Sbjct: 124 cattgcccacatatatatagatgttaatgaatttagatatagatgtgtgtctagattcat 65
Query: 61 taacatcaatatgaatgt 78
||||||| ||||||||||
Sbjct: 64 taacatctatatgaatgt 47
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 9 acattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatca 68
|||||||||||||| |||||||||||| ||| | || | | |||| |||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatct 106
Query: 69 atatgaatgtgggcaatg 86
|||| ||||||||||||
Sbjct: 107 atatatatgtgggcaatg 124
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 3e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||||||||||| | |||||||||||| |||| ||| | | |||||||||||
Sbjct: 124 cattttccacattcatataggtgttaatgaatctagacatctatatatatctagattcat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||| | ||||||||||||| ||||
Sbjct: 64 taacacctatatgaatgtgggaaatg 39
Score = 75.8 bits (38), Expect = 8e-14
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||||| | |||||||||||| | |||||| ||||||||||||||||||
Sbjct: 45 ccacattcatataggtgttaatgaatctagatatatatagatgtctagattcattaacac 104
Query: 67 caatatgaatgtgg 80
| ||||||||||||
Sbjct: 105 ctatatgaatgtgg 118
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 83.8 bits (42), Expect = 3e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| || ||||||||||||| |||||||||||| | | ||| |||||||||||||||
Sbjct: 124 cattgcccgcattcatatagatgttaatgaatctatatacttatatgtgtctagattcat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
|| |||| || |||||||||||||||
Sbjct: 64 tagcatctatgtgaatgtgggcaatg 39
Score = 75.8 bits (38), Expect = 8e-14
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||||||||| |||||| ||||||||||| ||| |||| || | |||||||||
Sbjct: 39 cattgcccacattcacatagatgctaatgaatctagacacatataagtatatagattcat 98
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||||| ||||||||| ||||||||
Sbjct: 99 taacatctatatgaatgcgggcaatg 124
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 83.8 bits (42), Expect = 3e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||||||||||| | |||||||||||| |||| ||| | | |||||||||||
Sbjct: 9 cattttccacattcatataggtgttaatgaatctagacatctatatatatctagattcat 68
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||| | ||||||||||||| ||||
Sbjct: 69 taacacctatatgaatgtgggaaatg 94
Score = 75.8 bits (38), Expect = 8e-14
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||||| | |||||||||||| | |||||| ||||||||||||||||||
Sbjct: 88 ccacattcatataggtgttaatgaatctagatatatatagatgtctagattcattaacac 29
Query: 67 caatatgaatgtgg 80
| ||||||||||||
Sbjct: 28 ctatatgaatgtgg 15
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 3e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 17 atagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaat 76
|||||| |||||||||||| |||||||| ||||| |||||||||||||||| | ||||||
Sbjct: 108 atagatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaat 49
Query: 77 gtgggcaatg 86
||||| ||||
Sbjct: 48 gtgggtaatg 39
Score = 81.8 bits (41), Expect = 1e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||| ||||| |||||||||||||||| |||| | |||||||||||||||||||
Sbjct: 45 ccacattcatttagatgttaatgaatctaaacacatatatatgtctagattcattaacat 104
Query: 67 c 67
|
Sbjct: 105 c 105
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 3e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||||||||| || |||||||||||| |||||||| | | |||||||||||
Sbjct: 124 cattctccacattcatattaatgttaatgaatctagacatatatatctatctagattcat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||| |||||||||||||| ||||
Sbjct: 64 taacactaatatgaatgtgggaaatg 39
Score = 67.9 bits (34), Expect = 2e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| | |||||||||||| | | |||| | |||||||||||||||||||
Sbjct: 45 ccacattcatattagtgttaatgaatctagatagatatatatgtctagattcattaacat 104
Query: 67 caatatgaatgtgg 80
|||||||||||||
Sbjct: 105 taatatgaatgtgg 118
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 3e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| | | |||||||||||| |||||||| | | |||||||||||||||||
Sbjct: 118 ccacattcatattgttgttaatgaatctagacatatatatctatctagattcattaacat 59
Query: 67 caatatgaatgtgg 80
||||||| ||||||
Sbjct: 58 caatatggatgtgg 45
Score = 81.8 bits (41), Expect = 1e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||| ||||| ||| |||||||||||| | | |||| | |||||||||||||
Sbjct: 39 cattttccacatccatattgatgttaatgaatctagatagatatatatgtctagattcat 98
Query: 61 taacatcaatatgaatgtggg 81
||||| |||||||||||||||
Sbjct: 99 taacaacaatatgaatgtggg 119
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 1e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| |||||||||||||||||| | | | |||||||||||
Sbjct: 124 cattgcccacattcatatagatggtaatgaatctaaacatatgtctatatctagattcat 65
Query: 61 taacatcaatatg 73
||||||| |||||
Sbjct: 64 taacatctatatg 52
Score = 65.9 bits (33), Expect = 8e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 14 catatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatg 73
||||||||| |||||||||||| | ||| | | ||| ||||||||||| |||| |||||
Sbjct: 52 catatagatgttaatgaatctagatatagacatatgtttagattcattaccatctatatg 111
Query: 74 aatgtgggcaatg 86
|||||||||||||
Sbjct: 112 aatgtgggcaatg 124
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 81.8 bits (41), Expect = 1e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||| | ||| |||||||||||| |||||||| | | |||||||||||||||||||||
Sbjct: 114 attcatgttgatattaatgaatctagacatatatatctatctagattcattaacatcaat 55
Query: 71 atgaatgtg 79
|||||||||
Sbjct: 54 atgaatgtg 46
Score = 65.9 bits (33), Expect = 8e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||| ||| |||||||||||| | | |||| | |||||||||||||||| |||
Sbjct: 46 cacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaatatc 105
Query: 68 aatatgaat 76
|| ||||||
Sbjct: 106 aacatgaat 114
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 81.8 bits (41), Expect = 1e-15
Identities = 75/86 (87%), Gaps = 4/86 (4%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||||||||||||| || |||||||||||| |||||||| | ||||||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctagacatatatat----ctagattcat 60
Query: 61 taacatcaatatgaatgtgggcaatg 86
|||||| ||||||||||||||||||
Sbjct: 61 taacatatatatgaatgtgggcaatg 86
Score = 81.8 bits (41), Expect = 1e-15
Identities = 75/86 (87%), Gaps = 4/86 (4%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||||||||||||| || |||||||||||| | |||||||| ||||||||||
Sbjct: 86 cattgcccacattcatatatatgttaatgaatctagatatatatgt----ctagattcat 31
Query: 61 taacatcaatatgaatgtgggcaatg 86
|||||| ||||||||||||||||||
Sbjct: 30 taacatatatatgaatgtgggcaatg 5
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 1e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 10 cattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaa 69
||||||| ||||| ||||||||||||||||||| | | |||||||||| ||||||||| |
Sbjct: 48 cattcatttagatgttaatgaatctaaacatatgtatatgtctagatttattaacatcta 107
Query: 70 tatgaatgtgggcaatg 86
||| ||||||||||||
Sbjct: 108 aatgtatgtgggcaatg 124
Score = 58.0 bits (29), Expect = 2e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||| ||| ||||| ||||| |||||| ||||||| | ||| |||||||||
Sbjct: 124 cattgcccacatacatttagatgttaataaatctagacatatacatatgtttagattcat 65
Query: 61 taacatcaatatgaatg 77
||||||| | |||||||
Sbjct: 64 taacatctaaatgaatg 48
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 5e-15
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 124 cattttccacattcatatagatgctaatgaatttaaacatatatatgcgtatagattcat 65
Query: 61 taacatcaatatgaat 76
|| |||| ||||||||
Sbjct: 64 tagcatctatatgaat 49
Score = 52.0 bits (26), Expect = 1e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||||||| ||||||||||| || |||| | ||| || |||||||| |||| ||
Sbjct: 49 attcatatagatgctaatgaatctatacgcatatatatgtttaaattcattagcatctat 108
Query: 71 atgaatgtgg 80
||||||||||
Sbjct: 109 atgaatgtgg 118
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 79.8 bits (40), Expect = 5e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||| ||||| ||||||||||||||||||| | ||||| |||||||||||||||
Sbjct: 45 ccacattcatttagatgttaatgaatctaaacatatgtatgtgtttagattcattaacat 104
Score = 63.9 bits (32), Expect = 3e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 15 atatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatga 74
||||| || |||||||||||||||| ||| | ||| |||||||||||||||| | ||||
Sbjct: 110 atatatatgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatga 51
Query: 75 atgtgggcaatg 86
||||||| ||||
Sbjct: 50 atgtgggtaatg 39
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 5e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||| |||| ||| || ||||||||| |||||||| | | |||||||||||||||||
Sbjct: 45 ccacatttatattgatgtttatgaatctagacatatatttctatctagattcattaacat 104
Query: 67 caatatgaatgtgggcaatg 86
|||||| |||||||| ||||
Sbjct: 105 caatataaatgtgggaaatg 124
Score = 63.9 bits (32), Expect = 3e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||| |||| ||| |||||||||||| | | | || | ||||||||||||| |||||
Sbjct: 118 ccacatttatattgatgttaatgaatctagatagaaatatatgtctagattcataaacat 59
Query: 67 caatatgaatgtgggcaatg 86
|||||| |||||||| ||||
Sbjct: 58 caatataaatgtgggaaatg 39
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 77.8 bits (39), Expect = 2e-14
Identities = 76/87 (87%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattca- 59
||||| |||||||||||||||| |||||||||||| | |||| | ||||||||||| |
Sbjct: 125 cattgcccacattcatatagatgttaatgaatctagatatatgtaggtgtctagattaat 66
Query: 60 ttaacatcaatatgaatgtgggcaatg 86
|||||||| ||||||||||||| ||||
Sbjct: 65 ttaacatctatatgaatgtgggtaatg 39
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||| ||||||||||||||||||
Sbjct: 89 tctagattcattaacatctatatgaatgtgggcaatg 125
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 2e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||| ||| |||||||||||| | |||| | | ||||||||||||||||||||
Sbjct: 117 cacattcatatggatgttaatgaatctagatatatgtctatgtctagattcattaacatc 58
Query: 68 aatatgaatgtgggcaatg 86
|||||||| | |||||||
Sbjct: 57 tatatgaatataggcaatg 39
Score = 73.8 bits (37), Expect = 3e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||||||| |||||||||||| ||||| | | | |||||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatagacatatatctagattcattaacatccat 108
Query: 71 atgaatgtg 79
|||||||||
Sbjct: 109 atgaatgtg 117
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 77.8 bits (39), Expect = 2e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
|||||| |||| ||| ||||||||||| |||||||| | | |||||||||||||||||
Sbjct: 117 cacatttatattgatgataatgaatctagacatatatatctatctagattcattaacata 58
Query: 68 aatatgaatgtgggcaatg 86
|||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatg 39
Score = 65.9 bits (33), Expect = 8e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| || |||||||||||| | | |||| | ||||||||||||||| |||
Sbjct: 45 ccacattcatatttatgttaatgaatctagatagatatatatgtctagattcattatcat 104
Query: 67 caatatgaatgtg 79
|||||| ||||||
Sbjct: 105 caatataaatgtg 117
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 8e-14
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||| |||||| || |||||||||||||||| ||| | |||||||||||||
Sbjct: 39 cattgcccacatacatataaatgttaatgaatctaaacacatacatatgtctagattcat 98
Query: 61 taacatcaatatgaatgtgggcaatg 86
|| |||| | |||||| |||||||||
Sbjct: 99 tagcatctaaatgaatttgggcaatg 124
Score = 75.8 bits (38), Expect = 8e-14
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||| |||||| ||||| ||||||||||| |||||| | ||||| |||||||||
Sbjct: 124 cattgcccaaattcatttagatgctaatgaatctagacatatgtatgtgtttagattcat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
|||||| ||||| ||||||||||||
Sbjct: 64 taacatttatatgtatgtgggcaatg 39
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 8e-14
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||||||| || ||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 124 cattgtccatatacatatagatgttaatgaatctaaatatatacacatgtctagattcat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||| | | ||||||||||| ||||
Sbjct: 64 taacaactaaatgaatgtgggtaatg 39
Score = 48.1 bits (24), Expect = 2e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||| ||| | |||||||||||| |||| | | | | | |||||||||||||||
Sbjct: 45 ccacattcatttagttgttaatgaatctagacatgtgtatatatttagattcattaacat 104
Query: 67 caatatgaatgtgggcaatg 86
| ||||| || ||| |||||
Sbjct: 105 ctatatgtatatggacaatg 124
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 75.8 bits (38), Expect = 8e-14
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| ||||||||||| ||||||| |||| ||||||||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaatctggacatata--tgtggctagattcat 96
Query: 61 taacatcaatatgaatgtgggcaat 85
|| ||| ||| |||||||||||||
Sbjct: 97 tagtatctataagaatgtgggcaat 121
Score = 67.9 bits (34), Expect = 2e-11
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 2 attgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatt 61
|||| |||||||| ||||||| ||||||||||| || |||| ||| | |||||||||
Sbjct: 121 attgcccacattcttatagatactaatgaatctagccacatatatgt--ccagattcatt 64
Query: 62 aacatcaatatgaatgtgggcaatg 86
|||||| ||||||||||||||||||
Sbjct: 63 aacatctatatgaatgtgggcaatg 39
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 73.8 bits (37), Expect = 3e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 46 tgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 62 tgtgtctagattcattaacatccatatgaatgtgggcaatg 102
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||| ||||||||||||||||||
Sbjct: 47 tctagattcattaacatccatatgaatgtgggcaatg 11
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 3e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 14 catatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatg 73
|||||||| |||||||||||||||| ||| | |||||||||||||||||||| | |||
Sbjct: 52 catatagacgttaatgaatctaaacacatacatatgtctagattcattaacatctaaatg 111
Query: 74 aatgtgggcaatg 86
||| |||||||||
Sbjct: 112 aatatgggcaatg 124
Score = 67.9 bits (34), Expect = 2e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||| |||||| ||||| |||||||||||| |||||| | ||||| |||||||||
Sbjct: 124 cattgcccatattcatttagatgttaatgaatctagacatatgtatgtgtttagattcat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
|||| || ||||| || || ||||||
Sbjct: 64 taacgtctatatgtatatgagcaatg 39
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 3e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| ||| |||||| ||||| |||||||||||| |||||| | ||| | |||||||||
Sbjct: 39 cattgcccatattcatttagatgttaatgaatctagacatatgtatgtatttagattcat 98
Query: 61 taacatcaatatgaatgtgggcaat 85
||||||| ||||| | |||||||||
Sbjct: 99 taacatccatatgtacgtgggcaat 123
Score = 65.9 bits (33), Expect = 8e-11
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 14 catatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatg 73
||||| ||| |||||||||||||| | ||| | |||||||||||||||||||| | |||
Sbjct: 111 catatggatgttaatgaatctaaatacatacatatgtctagattcattaacatctaaatg 52
Query: 74 aatgtgggcaatg 86
||| |||||||||
Sbjct: 51 aatatgggcaatg 39
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 3e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||| ||| ||||||||||| | | |||| | ||||||||||||||| ||||
Sbjct: 46 cacattcatattgatactaatgaatctagatagatatatatgtctagattcattagcatc 105
Query: 68 aatatgaatgtgg 80
|||||||||||||
Sbjct: 106 aatatgaatgtgg 118
Score = 73.8 bits (37), Expect = 3e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| ||||||||||| |||||||| | | ||||||||||||| ||
Sbjct: 118 ccacattcatattgatgctaatgaatctagacatatatatctatctagattcattagtat 59
Query: 67 caatatgaatgtg 79
|||||||||||||
Sbjct: 58 caatatgaatgtg 46
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 71.9 bits (36), Expect = 1e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 43 atgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 55 atgtgtgtttagattcattaacatctatatgaatgtgggcaatg 98
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaaca 39
||||| |||||||||||||||| ||||||||||||||||
Sbjct: 98 cattgcccacattcatatagatgttaatgaatctaaaca 60
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 1e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||| |||| ||| ||||||||||| | |||||| | | ||||||||||||||| |
Sbjct: 118 ccacattaatattgatggtaatgaatctagaaatatatatctatctagattcattaacgt 59
Query: 67 caatatgaatgtgggcaatg 86
||||||||||||||| ||||
Sbjct: 58 caatatgaatgtgggaaatg 39
Score = 61.9 bits (31), Expect = 1e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| || |||||||||||| | | |||| | | ||||||||||||| |||
Sbjct: 45 ccacattcatattgacgttaatgaatctagatagatatatatttctagattcattaccat 104
Query: 67 caatatgaatgtggg 81
|||||| ||||||||
Sbjct: 105 caatattaatgtggg 119
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 71.9 bits (36), Expect = 1e-12
Identities = 69/79 (87%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||||||| |||||||||||| |||||| | ||||| ||||||||||||||
Sbjct: 115 cacattcatatagatgttaatgaatctatgcatata--tatgtcttgattcattaacatc 58
Query: 68 aatatgaatgtgggcaatg 86
| ||||||||||| ||||
Sbjct: 57 tacatgaatgtgggaaatg 39
Score = 60.0 bits (30), Expect = 5e-09
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||| ||||| |||||||||| | |||||||| || | ||||||||||||||
Sbjct: 45 ccacattcatgtagatgttaatgaatcaagacatatatatgcat--agattcattaacat 102
Query: 67 caatatgaatgtg 79
| |||||||||||
Sbjct: 103 ctatatgaatgtg 115
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 1e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||||||| |||| |||||| | ||||| ||||||||||||||| |||
Sbjct: 45 ccacattcatatagatgctaataaatctatatatataataatgtctagattcattagcat 104
Query: 67 caatatgaatgtgggcaatg 86
| ||||||||||||||||||
Sbjct: 105 ctatatgaatgtgggcaatg 124
Score = 52.0 bits (26), Expect = 1e-06
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||||||||||||||| ||||||||||| |||| | | | | |||||| ||
Sbjct: 124 cattgcccacattcatatagatgctaatgaatctagacattattatatatatagatttat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
|| |||| ||||||||||||| ||||
Sbjct: 64 tagcatctatatgaatgtgggtaatg 39
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 71.9 bits (36), Expect = 1e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||||||||||| || ||||| |||||||||||| | |||| | ||| |||||||||||
Sbjct: 122 cattgtccacatttatttagatattaatgaatctagatatatgtatgtttctagattcat 63
Query: 61 taacatcaatat 72
||||||| ||||
Sbjct: 62 taacatctatat 51
Score = 46.1 bits (23), Expect = 7e-05
Identities = 71/86 (82%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||||||||||| |||||||| |||||||||||| | | ||| | | |||||||||||
Sbjct: 39 cattgtccacat--atatagatgttaatgaatctagaaacatacatatatctagattcat 96
Query: 61 taacatcaatatgaatgtgggcaatg 86
||| ||| | || ||||||| |||||
Sbjct: 97 taatatctaaataaatgtggacaatg 122
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 69.9 bits (35), Expect = 5e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 44 tgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 66 tgtgtgtctaaattcattaacatctatatgaatgtgggcaatg 108
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaat 32
||||| |||||||||||||||| |||||||||
Sbjct: 108 cattgcccacattcatatagatgttaatgaat 77
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 69.9 bits (35), Expect = 5e-12
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
|||||| |||| ||| ||||| |||||| | | |||| | ||||||||||||||||||||
Sbjct: 117 cacatttatattgatgttaataaatctatatagatatatatgtctagattcattaacatc 58
Query: 68 aatatgaatgtgggcaatg 86
||||||||| |||| ||||
Sbjct: 57 aatatgaatatgggaaatg 39
Score = 65.9 bits (33), Expect = 8e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| |||||||||||| |||||||| | | | |||||| ||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctagacatatatatctatatagatttattaacatcaat 108
Query: 71 atgaatgtg 79
|| ||||||
Sbjct: 109 ataaatgtg 117
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 69.9 bits (35), Expect = 5e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatg 39
Score = 61.9 bits (31), Expect = 1e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatata 43
||||| |||||||||||||||| |||||||||||| |||||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaatctagacatata 81
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 69.9 bits (35), Expect = 5e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 44 tgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 81 tgtgtgtctaaattcattaacatctatatgaatgtgggcaatg 39
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaat 32
||||| |||||||||||||||| |||||||||
Sbjct: 39 cattgcccacattcatatagatgttaatgaat 70
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 5e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 24 ttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggca 83
|||||||||||| | | |||| | |||||||||||||||| ||||||||||||||||| |
Sbjct: 101 ttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaa 42
Query: 84 atg 86
|||
Sbjct: 41 atg 39
Score = 67.9 bits (34), Expect = 2e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaac 64
|||||||||||| ||| |||||||||||| |||||||| | | |||||||||||||||
Sbjct: 45 ccacattcatattgatattaatgaatctagacatatatatctatctagattcattaac 102
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 5e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 86 tgtctagattcattaacatcaatatgaatgtgggaaatg 124
Score = 60.0 bits (30), Expect = 5e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||| |||||||| | | ||| ||| ||||| ||
Sbjct: 118 ccacattcatattgatgttaatgaatctagacatatatatttagctaaatttattaatat 59
Query: 67 caatatgaatgtgg 80
|||||||||||||
Sbjct: 58 aaatatgaatgtgg 45
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 69.9 bits (35), Expect = 5e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatg 39
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatata 43
|||||||||||| ||| |||||||||||| |||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctagacatata 81
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 5e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||||||||| ||| |||||||||| |||||||| | | |||||||||||
Sbjct: 39 cattttccacattcatatcgatgccaatgaatctagacatatatatctatctagattcat 98
Query: 61 taacatcaatatgaatgtg 79
|| |||||||||| |||||
Sbjct: 99 tagcatcaatatggatgtg 117
Score = 54.0 bits (27), Expect = 3e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 2 attgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatt 61
||||| ||||| ||||| ||| ||||||||||| | | |||| | ||||||||||||||
Sbjct: 123 attgttcacatccatattgatgctaatgaatctagatagatatatatgtctagattcatt 64
Query: 62 aacatcaatatgaatgtgg 80
|||| ||||||||||||
Sbjct: 63 ggcatcgatatgaatgtgg 45
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa
Japonica Group
Length = 136
Score = 69.9 bits (35), Expect = 5e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 44 tgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 56 tgtgtgtttagattcattaacatctatatgaatgtgggcaatg 98
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaaca 39
||||| |||||||||||||||| ||||||||||||||||
Sbjct: 98 cattgcccacattcatatagatgttaatgaatctaaaca 60
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 69.9 bits (35), Expect = 5e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatg 39
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||||| ||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaatg 115
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 69.9 bits (35), Expect = 5e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatg 39
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatat 44
|||||||||||| ||| |||||||||||| ||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctagacatatat 82
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 5e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||| ||| |||||||||||| | |||| | | | ||||||||||||||||||
Sbjct: 46 cacattcatatggatgttaatgaatctagatatatgtctatatctagattcattaacatc 105
Query: 68 aatatgaatgtgggcaatg 86
|||||||| | |||||||
Sbjct: 106 tatatgaatataggcaatg 124
Score = 65.9 bits (33), Expect = 8e-11
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||||||| |||||||||||| | ||| | | | |||||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagatatagacatatatctagattcattaacatccat 55
Query: 71 atgaatgtg 79
|||||||||
Sbjct: 54 atgaatgtg 46
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 69.9 bits (35), Expect = 5e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
|||||| |||| ||| ||||| |||||| | | |||| | ||||||||||||||||||||
Sbjct: 44 cacatttatattgatgttaataaatctatatagatatatatgtctagattcattaacatc 103
Query: 68 aatatgaatgtgggcaatg 86
||||||||| |||| ||||
Sbjct: 104 aatatgaatatgggaaatg 122
Score = 65.9 bits (33), Expect = 8e-11
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| |||||||||||| |||||||| | | | |||||| ||||||||||||
Sbjct: 112 attcatattgatgttaatgaatctagacatatatatctatatagatttattaacatcaat 53
Query: 71 atgaatgtg 79
|| ||||||
Sbjct: 52 ataaatgtg 44
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 69.9 bits (35), Expect = 5e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||||||| ||| |||||||||||| |||||||| | | |||||||||||||||||
Sbjct: 122 ccacattcatagtgatgttaatgaatctagacatatatatctatctagattcattaacat 63
Query: 67 caatatg 73
|| ||||
Sbjct: 62 cactatg 56
Score = 69.9 bits (35), Expect = 5e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 24 ttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggca 83
|||||||||||| | | |||| | ||||||||||||||||||||| |||||||||||| |
Sbjct: 66 ttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgggaa 125
Query: 84 atg 86
|||
Sbjct: 126 atg 128
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 5e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 10 cattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaa 69
||||||||| ||| ||||||||| || |||| ||| | | ||||||||||||||||||||
Sbjct: 115 cattcatattgatgttaatgaatatagacatctatatctatctagattcattaacatcaa 56
Query: 70 tatgaat 76
|||||||
Sbjct: 55 tatgaat 49
Score = 61.9 bits (31), Expect = 1e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| |||||||||||| | | |||| |||||| ||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctagatagatatagatgtctatattcattaacatcaat 108
Query: 71 atgaatg 77
|||||||
Sbjct: 109 atgaatg 115
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 69.9 bits (35), Expect = 5e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 54 tgtctagattcattaacatctatatgaatgtgggcaatg 92
Score = 56.0 bits (28), Expect = 7e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacat 40
||||| |||||||||||||||| |||||||||||| ||||
Sbjct: 92 cattgcccacattcatatagatgttaatgaatctagacat 53
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||| ||||||||| |||||||||||||||| || | |||||| |||||||||||||
Sbjct: 117 cacatacatatagatgttaatgaatctaaacacgtacatatgtctatattcattaacatc 58
Query: 68 aatatgaatgtgggcaat 85
| |||||||| ||||||
Sbjct: 57 taaatgaatgtaggcaat 40
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 9 acattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatca 68
|||||||| ||||| ||||||||| || |||||| | |||| ||||||||||||||||
Sbjct: 47 acattcatttagatgttaatgaatatagacatatgtacgtgtttagattcattaacatct 106
Query: 69 atatgaatgtgggcaatg 86
||||| ||||| ||||||
Sbjct: 107 atatgtatgtgagcaatg 124
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| |||||||||||||||||||| | | |||| |||||||| |||||||
Sbjct: 114 attcatattgatgctaatgaatctaaacatatatatctatctaaattcattagcatcaat 55
Query: 71 atgaat 76
||||||
Sbjct: 54 atgaat 49
Score = 46.1 bits (23), Expect = 7e-05
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 6 tccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaaca 65
|||| |||||||| ||| |||||||| || | | |||| | ||| ||||||||||| ||
Sbjct: 44 tccatattcatattgatgctaatgaatttagatagatatatatgtttagattcattagca 103
Query: 66 tcaatatgaat 76
|||||||||||
Sbjct: 104 tcaatatgaat 114
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| ||||||||||| |||||||| | | |||||| ||||||||||||||
Sbjct: 114 attcatattgatgctaatgaatctagacatatatatctatctagagtcattaacatcaat 55
Query: 71 atgaatgtgg 80
| ||||||||
Sbjct: 54 acgaatgtgg 45
Score = 63.9 bits (32), Expect = 3e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||||| ||| ||| ||||||| |||| | | |||| | |||||||||||||
Sbjct: 39 cattttccacattcgtattgatgttaatgactctagatagatatatatgtctagattcat 98
Query: 61 taacatcaatatgaat 76
|| |||||||||||||
Sbjct: 99 tagcatcaatatgaat 114
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 9 acattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatca 68
|||||||||||||| |||||| ||||| ||| || |||||||||||||||| |||||
Sbjct: 47 acattcatatagatgttaatggatctatacacttacatgtgtctagattcattgacatct 106
Query: 69 atatgaatgtgggcaatg 86
|| |||| ||||||||||
Sbjct: 107 atgtgaacgtgggcaatg 124
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||||| ||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatg 40
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 65.9 bits (33), Expect = 8e-11
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 38 catatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||| || |||||||| |||||||| ||||||||||||||||||
Sbjct: 87 catatatgtatgcctagattcgttaacatctatatgaatgtgggcaatg 39
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
||||| |||||||||||||||| |||| |||||||
Sbjct: 39 cattgcccacattcatatagatgttaacgaatcta 73
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||||| ||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatg 39
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaat 76
|||||||||||||||||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaat 102
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 65.9 bits (33), Expect = 8e-11
Identities = 66/76 (86%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| |||||||||||| |||||| |||||||||||||||||||| ||
Sbjct: 49 attcatattgatgttaatgaatctagg--tatatgcgtgtctagattcattaacatttat 106
Query: 71 atgaatgtgggcaatg 86
|||||||||| |||||
Sbjct: 107 atgaatgtggacaatg 122
Score = 61.9 bits (31), Expect = 1e-09
Identities = 73/86 (84%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||||||||||||||||| || |||||||||||| ||| || | ||||||||||
Sbjct: 122 cattgtccacattcatataaatgttaatgaatctagacacgcatatac--ctagattcat 65
Query: 61 taacatcaatatgaatgtgggcaatg 86
|||||||||||||||| | |||||||
Sbjct: 64 taacatcaatatgaatataggcaatg 39
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 8e-11
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||| ||| | |||||||||| |||||||||| |||||||||||| | ||
Sbjct: 117 cacattcatattgatgtcaatgaatctagacatatatgtatgtctagattcancgatttc 58
Query: 68 aatatgaatgtg 79
||||||||||||
Sbjct: 57 aatatgaatgtg 46
Score = 63.9 bits (32), Expect = 3e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 28 tgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtg 79
|||||||| ||||| || | |||||||||||||| |||||||||||||||||
Sbjct: 66 tgaatctagacatacatatatgtctagattcattgacatcaatatgaatgtg 117
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 65.9 bits (33), Expect = 8e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 42 tatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||| ||||||||| |||||||||||| |||||
Sbjct: 62 tatgtgtgtctagatttattaacatctatatgaatgtggacaatg 106
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
|||||||||||||||||||||| ||||| ||||||
Sbjct: 106 cattgtccacattcatatagatgttaataaatcta 72
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||||| ||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatg 112
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaat 76
|||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||||| ||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatg 39
Score = 46.1 bits (23), Expect = 7e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||| |||||||||||||||||||| || ||||| ||||
Sbjct: 84 tgtccagattcattaacatcaatataaacgtgggaaatg 122
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||||| ||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatg 101
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 65.9 bits (33), Expect = 8e-11
Identities = 67/78 (85%), Gaps = 4/78 (5%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||| |||| |||| |||||||||||||| | |||||| ||||||||||||||||
Sbjct: 114 ccacatacataaagatgttaatgaatctaaatacatatgt----ctagattcattaacat 59
Query: 67 caatatgaatgtgggcaa 84
| | ||||||||||||||
Sbjct: 58 ctaaatgaatgtgggcaa 41
Score = 52.0 bits (26), Expect = 1e-06
Identities = 63/75 (84%), Gaps = 4/75 (5%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||| ||||| |||||||||||| |||||| || | |||||||||||||||
Sbjct: 45 ccacattcatttagatgttaatgaatctagacatat----gtatttagattcattaacat 100
Query: 67 caatatgaatgtggg 81
| |||| |||||||
Sbjct: 101 ctttatgtatgtggg 115
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 8e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 46 tgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 66 tgtgtatagattcattaacatctatatgaatgtgggcaatg 106
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
||||| |||||||||||||||| ||||||||||||
Sbjct: 106 cattgcccacattcatatagatgttaatgaatcta 72
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||||| ||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatg 102
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa
Indica Group
Length = 143
Score = 65.9 bits (33), Expect = 8e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgg 80
|||||||||||||||||||||||||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatgtgg 99
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatata 43
|||| ||||||||||||| ||| |||||||||||| |||||||
Sbjct: 105 cattttccacattcatattgatgttaatgaatctagacatata 63
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 3e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 39 atatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||| | ||||||||||||||| |||| ||||||||||||||||||
Sbjct: 57 atatatatatgtctagattcattagcatctatatgaatgtgggcaatg 104
Score = 56.0 bits (28), Expect = 7e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatat 44
||||| |||||||||||||||| ||||||||||| ||||||||
Sbjct: 104 cattgcccacattcatatagatgctaatgaatctagacatatat 61
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 3e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacat 40
|||||||||||||||||||||| |||||||||||| ||||
Sbjct: 98 cattgtccacattcatatagatgttaatgaatctagacat 59
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtggacaatg 98
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagat 22
||||||||||||||||||||||
Sbjct: 39 cattgtccacattcatatagat 60
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 63.9 bits (32), Expect = 3e-10
Identities = 59/69 (85%), Gaps = 8/69 (11%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||||||||| |||||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctaaacata--------tctagattcattaacat 96
Query: 67 caatatgaa 75
|||||||||
Sbjct: 97 caatatgaa 105
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||| ||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtg 79
||||||||||||||||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtg 46
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 8 cacattcatatagattttaatgaatctaaacatatatg 45
||||||||||| ||| |||||||||||| ||| |||||
Sbjct: 46 cacattcatattgatgttaatgaatctagacaaatatg 83
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtg 79
||||||||||||||||||||||||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtg 106
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||||||||||||||| |||| ||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatg 105
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||| |||||||||||||||||||||||| ||||
Sbjct: 57 tgtctagatccattaacatcaatatgaatgtgggaaatg 95
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatat 44
|||||||||||| ||| |||||| ||||| ||||||||
Sbjct: 89 ccacattcatattgatgttaatggatctagacatatat 52
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||| ||||||||||| ||||||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtgtgcaatg 98
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatat 44
||||||||||||||| |||||||||||| ||||||||
Sbjct: 91 cacattcatatagatgttaatgaatctagacatatat 55
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 43 tgtctagattcattgacatcaatatgaatgtgggaaatg 5
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatg 84
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 61.9 bits (31), Expect = 1e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||| ||||| ||| ||||||||||| |||||||| | ||||||||||||||| ||
Sbjct: 117 cacatccatattgatgctaatgaatctagacatatatatccgtctagattcattaatata 58
Query: 68 aatatgaatgtgggcaatg 86
| |||||||||||| ||||
Sbjct: 57 agtatgaatgtgggaaatg 39
Score = 58.0 bits (29), Expect = 2e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||||||| || |||||||||||| || |||| | ||||||||||||||| |||
Sbjct: 45 ccacattcatacttatattaatgaatctagacggatatatatgtctagattcattagcat 104
Query: 67 caatatgaatgtg 79
||||||| |||||
Sbjct: 105 caatatggatgtg 117
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||| |||||||||||||||||||||||||| ||||
Sbjct: 74 tgtctagtttcattaacatcaatatgaatgtgggaaatg 112
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgg 80
|||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgg 80
|||||||||||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgg 90
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatg 45
|||| ||||||||||||| ||| |||||||||||| | |||||||
Sbjct: 96 cattttccacattcatattgatgttaatgaatctagatatatatg 52
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||||||||||||||| |||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatg 39
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 1e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||||||||| || |||||||||||| |||||||| | |||||||||||||||||
Sbjct: 117 cacattcatattaatgttaatgaatctagacatatatatccaactagattcattaacatc 58
Query: 68 aatatgaatgtgggcaatg 86
|||||||| |||| ||||
Sbjct: 57 catatgaatatgggtaatg 39
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| |||||||||||| |||| | ||||||||||||||||||| |||
Sbjct: 49 attcatatggatgttaatgaatctagttggatatatatgtctagattcattaacattaat 108
Query: 71 atgaatgtg 79
|||||||||
Sbjct: 109 atgaatgtg 117
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 1e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||||||||| ||| |||||||||| |||||||| | | |||||||||||
Sbjct: 39 cattttccacattcatatcgatgccaatgaatctagacatatatatttatctagattcat 98
Query: 61 taacatcaatatgaatgtg 79
|| |||| ||||| |||||
Sbjct: 99 tagcatcgatatggatgtg 117
Score = 50.1 bits (25), Expect = 5e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
||||| ||||| ||| ||||||||||| | | |||| | |||||||||||||| ||||
Sbjct: 117 cacatccatatcgatgctaatgaatctagataaatatatatgtctagattcattggcatc 58
Query: 68 aatatgaatgtgg 80
||||||||||||
Sbjct: 57 gatatgaatgtgg 45
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||| ||||||||| ||||||||||||||||||
Sbjct: 62 tgtctagatttattaacatctatatgaatgtgggcaatg 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatat 42
||||| |||||||||||||||| ||||| |||||| ||||||
Sbjct: 100 cattgcccacattcatatagatgttaataaatctagacatat 59
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatg 39
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 80 tgtctagattcattgacatcaatatgaatgtgggaaatg 118
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||||||||||||||| |||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatg 115
Score = 58.0 bits (29), Expect = 2e-08
Identities = 53/60 (88%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| |||||||||||| ||||||| | | |||||||||||||||||||||
Sbjct: 105 attcatattgatgttaatgaatctagacatata--tctatctagattcattaacatcaat 48
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||| ||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatg 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 59 attaacatcaatatgaatgtgg 80
||||||||||||||||||||||
Sbjct: 62 attaacatcaatatgaatgtgg 41
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 61.9 bits (31), Expect = 1e-09
Identities = 66/78 (84%), Gaps = 6/78 (7%)
Strand = Plus / Minus
Query: 9 acattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatca 68
|||||||||| ||| ||||||||||| |||||||| |||||||||||| |||||
Sbjct: 110 acattcatattgatgctaatgaatctagacatatat------ctagattcattagcatca 57
Query: 69 atatgaatgtgggcaatg 86
||||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatg 39
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgt 78
||||||||||||||| |||||||||||||||
Sbjct: 80 tgtctagattcattagcatcaatatgaatgt 110
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgg 80
|||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgg 45
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
|||| ||||||||||||| ||| ||||||||||||
Sbjct: 39 cattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||| ||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatg 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatat 42
|||||||||||| ||| |||||||||||| ||||||
Sbjct: 100 ccacattcatattgatgttaatgaatctatacatat 65
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 60.0 bits (30), Expect = 5e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtg 79
||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtg 46
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 60.0 bits (30), Expect = 5e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtg 79
||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtg 46
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 60.0 bits (30), Expect = 5e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 49 gtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatg 98
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
||||| |||||| ||||||||| ||||||||||||
Sbjct: 98 cattgcccacatgcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 60.0 bits (30), Expect = 5e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtggg 81
||||||||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtggg 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacat 40
|||||||||||| ||| |||||||||||||||||
Sbjct: 92 ccacattcatattgatgttaatgaatctaaacat 59
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 60.0 bits (30), Expect = 5e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtg 79
||||||||||||||||||||||||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtg 86
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 5e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtg 79
||||||||||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtg 89
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgg 80
|||||||||||||||||||||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgg 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatat 42
|||| ||||||||||||| ||| |||||||||||| ||||||
Sbjct: 106 cattttccacattcatattgatgttaatgaatctatacatat 65
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 54 gattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||| ||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatg 39
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 gattcattaacatcaatatgaatgtg 79
||||||||||||||||||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtg 100
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacata 41
|||||||||||||||||||||| ||||| |||||| |||||
Sbjct: 103 cattgtccacattcatatagatgttaataaatctagacata 63
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||| ||||||||| |||||||||||| |||||
Sbjct: 65 tgtctagatttattaacatctatatgaatgtggacaatg 103
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgt 78
|||||||||||||||||||||||||||||
Sbjct: 53 tctagattcattaacatcaatatgaatgt 81
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgg 80
|||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgg 45
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 ttcattaacatcaatatgaatgtg 79
||||||||||||||||||||||||
Sbjct: 85 ttcattaacatcaatatgaatgtg 108
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
|||| ||||||||||||| ||| ||||||||||||
Sbjct: 39 cattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtg 49
|||| ||||||||||| ||||| |||||||||||| |||||||| ||||
Sbjct: 39 cattatccacattcatttagatgttaatgaatctagacatatatatgtg 87
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgg 80
|||||||||||||||||||| | ||||||||||
Sbjct: 77 tgtctagattcattaacatctaaatgaatgtgg 45
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa
Indica Group
Length = 112
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 46 tgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||| |||||||| |||||||||||| |||||
Sbjct: 34 tgtgtctagattcgttaacatctatatgaatgtggacaatg 74
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
|||||||||||||||||||||| |||| |||||||
Sbjct: 74 cattgtccacattcatatagatgttaacgaatcta 40
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
||||||| |||||||||||||||||||||||| ||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatg 13
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
||||||| |||||||||||||||||||||||| ||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatg 111
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||| ||||||||||||||||| ||||
Sbjct: 45 tctagattcattaatatcaatatgaatgtgggaaatg 81
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaat 76
|||||||||||||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaat 49
Score = 46.1 bits (23), Expect = 7e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagatt 57
|||||||| ||| |||||||||||| |||||||| | | ||||||||
Sbjct: 49 attcatattgatgttaatgaatctagacatatatatctatctagatt 95
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 54 gattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||| ||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatg 100
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||||||||||||| |||| ||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatg 39
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||||||||||||| |||| ||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatg 106
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa
Indica Group
Length = 134
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgg 80
|||||||||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgg 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 6 tccacattcatatagattttaatgaatcta 35
||||||||||||| ||| ||||||||||||
Sbjct: 91 tccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 56.0 bits (28), Expect = 7e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 49 gtctagattcattaacatcaatatgaat 76
||||||||||||||||||||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaat 101
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 56.0 bits (28), Expect = 7e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 51 ctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||| |||||||||||||||||| ||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 56.0 bits (28), Expect = 7e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtg 79
||||||||||||||| ||||||||||||||||
Sbjct: 53 tgtctagattcattagcatcaatatgaatgtg 84
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 7e-08
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
||||||||||| ||| |||||||| | | |||| | |||||||||||| |||| || ||
Sbjct: 49 attcatatagaggttagtgaatctatatagatatatatgtctagattcactaacctccat 108
Query: 71 atgaatgtgggcaatg 86
||||||||||| ||||
Sbjct: 109 atgaatgtgggaaatg 124
Score = 44.1 bits (22), Expect = 3e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| || ||| |||||||| |||||||| | | | |||||||| |||| |
Sbjct: 118 ccacattcatatggaggttagtgaatctagacatatatatctatatagattcactaacct 59
Query: 67 caatatgaat 76
| ||||||||
Sbjct: 58 ctatatgaat 49
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 56.0 bits (28), Expect = 7e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 39 atatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||| ||||| |||||||||||||||| |||| ||||||||||||
Sbjct: 53 atatatatgtgtttagattcattaacatctatatatatgtgggcaatg 100
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatat 44
||||| |||||| |||||||| |||||||||||||||| ||||
Sbjct: 100 cattgcccacatatatatagatgttaatgaatctaaacacatat 57
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 56.0 bits (28), Expect = 7e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 51 ctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||| |||||||||||||||||| ||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatg 109
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa
Japonica Group
Length = 140
Score = 56.0 bits (28), Expect = 7e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatat 42
|||||| ||||||||| |||||||||||||||||||
Sbjct: 96 ccacatacatatagatgttaatgaatctaaacatat 61
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||| ||||| ||||||| ||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatg 102
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 56.0 bits (28), Expect = 7e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatat 42
|||||| ||||||||| |||||||||||||||||||
Sbjct: 45 ccacatacatatagatgttaatgaatctaaacatat 80
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||| ||||| ||||||| ||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatg 39
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 56.0 bits (28), Expect = 7e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 51 ctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||| ||||| ||||||||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatg 113
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 47 gtgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||||||| | |||||||| ||||||
Sbjct: 78 gtgtctagattcattaacatctaagtgaatgtgagcaatg 39
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
||||| |||||| ||||||||| ||||||||||||
Sbjct: 113 cattgcccacatacatatagatgttaatgaatcta 79
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 56.0 bits (28), Expect = 7e-08
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 24 ttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtg 79
|||||||||||| | |||||| | | ||||||||||||| ||||||||||||||||
Sbjct: 100 ttaatgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtg 46
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 56.0 bits (28), Expect = 7e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 55 attcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||||||||||||| ||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatg 114
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 77 tgtctagattcattaacattaatataaatgtgggaaatg 39
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 56.0 bits (28), Expect = 7e-08
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 39 atatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||| ||||||||||||||||||| |||||||||||| |||||
Sbjct: 55 atatatgt-tgtctagattcattaacatatatatgaatgtggacaatg 101
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
||||||||||||||||||| || ||||||||||||
Sbjct: 101 cattgtccacattcatatatatgttaatgaatcta 67
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||| ||||||| |||||||||||||||||| ||||
Sbjct: 43 tgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||| |||| |||||||||||||||||| ||||
Sbjct: 74 tgtctagatttattagcatcaatatgaatgtgggaaatg 112
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||| | ||||||||||||||||||
Sbjct: 77 tgtctagattcattaacgtatatatgaatgtgggcaatg 39
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||| || || |||||||||||||||
Sbjct: 51 tgtctagattcattaacttctatgtgaatgtgggcaatg 13
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||| || || |||||||||||||||
Sbjct: 91 tgtctagattcattaacttctatgtgaatgtgggcaatg 129
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatat 42
||||| ||||||||| ||||| |||||||||||| ||||||
Sbjct: 13 cattgcccacattcacatagaagttaatgaatctagacatat 54
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgg 80
||||||| |||||||||||||||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgg 45
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
||||| |||||||||||||||||||||||| ||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatg 112
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||| ||||||||||||| ||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatg 39
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatcta 35
|||||||||||||||| ||||||||||||
Sbjct: 45 ccacattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||| | ||||||||||||||||||
Sbjct: 56 tgtctagattcattaacgtatatatgaatgtgggcaatg 94
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||| || |||||||||||||||||||| ||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatg 110
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 55 attcattaacatcaatatgaatgtgggcaatg 86
|||||| |||||||||||||||||||| ||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa
Japonica Group
Length = 137
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||| || || |||||||||||||||
Sbjct: 49 tgtctagattcattaacttctatgtgaatgtgggcaatg 11
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||| || || |||||||||||||||
Sbjct: 89 tgtctagattcattaacttctatgtgaatgtgggcaatg 127
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatat 42
||||| ||||||||| ||||| |||||||||||| ||||||
Sbjct: 127 cattgcccacattcacatagaagttaatgaatctagacatat 86
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||||||| ||||||||||||| ||||
Sbjct: 60 tgtctagattcattaacatatatatgaatgtgggtaatg 98
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatat 44
||||||||||||| || |||||||||||| ||||||||
Sbjct: 92 ccacattcatatatatgttaatgaatctagacatatat 55
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 56 ttcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||| ||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||| |||||||||||||||||| |||| ||||
Sbjct: 64 tgtctagatttattaacatcaatatgaatatgggaaatg 102
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||| || |||||||||||||| ||||
Sbjct: 63 tgtctagattcattaatataaatatgaatgtgggaaatg 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatat 44
|||||||||||| || |||||||||||| ||||||||
Sbjct: 95 ccacattcatatttatattaatgaatctagacatatat 58
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
|||||||||||||||||||||| ||||| ||||||
Sbjct: 39 cattgtccacattcatatagatgttaataaatcta 73
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||| ||||||||| |||||||||||| |||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatg 39
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaat 76
|||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtg 79
||||||||||||| ||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtg 46
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 53 agattcattaacatcaatatgaatgtgggcaatg 86
|||||||||| |||||||||||||||||| ||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatg 39
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 59 attaacatcaatatgaatgtgggcaatg 86
||||||||||||||||||||||| ||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatg 103
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 56 ttcattaacatcaatatgaatgtggg 81
||||||||||||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtggg 44
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 ttcattaacatcaatatgaatgtggg 81
||||||||||||||||| ||||||||
Sbjct: 87 ttcattaacatcaatataaatgtggg 112
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 4 tgtccacattcatatagattttaatgaatc 33
||||||||||||||||||| ||||||||||
Sbjct: 102 tgtccacattcatatagatgttaatgaatc 73
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 gattcattaacatcaatatgaatgtgg 80
|||||||||||||| ||||||||||||
Sbjct: 73 gattcattaacatctatatgaatgtgg 99
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtg 79
|||||||||||||| |||||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtg 46
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||| |||||||| || ||||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatg 39
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacata 41
||||||||| ||| |||||||| |||||||||||| |||||
Sbjct: 103 cattgtccatatttatatagatgttaatgaatctagacata 63
Score = 46.1 bits (23), Expect = 7e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||| |||| ||| ||| |||||
Sbjct: 65 tgtctagattcattaacatctatataaatatggacaatg 103
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||| ||| |||||||||||||| ||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatg 98
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 54 gattcattaacatcaatatgaatgtgggcaatg 86
||||||||| |||||||||||||||||| ||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatg 39
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 54 gattcattaacatcaatatgaatgtgggcaatg 86
||||||||| |||||||||||||||||| ||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatg 104
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 49 gtctagattcattaacatcaatatgaatgtggg 81
|||||||||||||| ||||||||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatggg 97
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 46 tgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||| ||||||||| || ||||||||| |||||
Sbjct: 79 tgtgtctagatttattaacatctatgtgaatgtggacaatg 39
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
||||||||||||||| |||||| ||||| ||||||
Sbjct: 39 cattgtccacattcacatagatgttaataaatcta 73
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagat 22
||||||||||||||||||||||
Sbjct: 103 cattgtccacattcatatagat 82
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaat 76
||||||||||||||| |||||||||||||
Sbjct: 60 tgtctagattcattatcatcaatatgaat 88
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 54 gattcattaacatcaatatgaatgtgggcaatg 86
||||||||| |||||||||||||||||| ||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatg 13
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 54 gattcattaacatcaatatgaatgtgggcaatg 86
||||||||| |||||||||||||||||| ||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatg 78
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||| ||||||||||| ||||| ||||
Sbjct: 41 tctagattcattaatatcaatatgaacgtgggaaatg 5
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||| ||||||||||| ||||| ||||
Sbjct: 51 tctagattcattaatatcaatatgaacgtgggaaatg 87
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||| ||| |||||||||||||| ||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||| ||| |||||||||||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatg 39
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtg 79
|||||||||||||| |||| ||||||||||||
Sbjct: 66 tgtctagattcattgacataaatatgaatgtg 97
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 57 tcattaacatcaatatgaatgtgg 80
||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 39 atatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||| | |||||| |||||||||||| | |||||||||||| ||||
Sbjct: 86 atatatatatgtctaaattcattaacatgagtatgaatgtgggaaatg 39
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtg 79
||||||||||||||||| | ||||||||||
Sbjct: 86 tctagattcattaacatgagtatgaatgtg 115
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatat 42
|||||||||| ||||| ||| |||||||||||||||
Sbjct: 100 ccacattcatttagatgttattgaatctaaacatat 65
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatg 73
||||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatg 83
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 attcattaacatcaatatgaatgt 78
||||||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgt 72
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtggg 81
||||||||||||| |||||||||||||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtggg 44
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 49 gtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||||| |||| |||||||||||||||||| ||||
Sbjct: 84 gtctagatccattggcatcaatatgaatgtgggaaatg 121
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtggg 81
|||||||| |||||||||| ||||||||||||
Sbjct: 74 tctagatttattaacatcactatgaatgtggg 105
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 57 tcattaacatcaatatgaatgtgg 80
||||||||||||||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtgg 112
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 57 tcattaacatcaatatgaatgtgg 80
||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 55 attcattaacatcaatatgaatgtgggcaatg 86
|||||||| |||||||||||||||||| ||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatg 80
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaat 76
|||| ||||||||||||||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaat 49
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 7e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
|||||| |||||||| ||| ||||||||||||||||||
Sbjct: 54 tgtctaaattcattagtatccatatgaatgtgggcaatg 92
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 7e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 50 tctagattcattaacatcaatatgaatgtgg 80
||||||||||||| ||||| |||||||||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtgg 45
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 agattcattaacatcaatatgaatgtg 79
|||||||||| ||||||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtg 94
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 atagattttaatgaatctaaacatata 43
|||||| ||||||||||||||||||||
Sbjct: 55 atagatgttaatgaatctaaacatata 81
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 7e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaatgtgg 80
||||||||||||| ||||||||| |||||||
Sbjct: 82 tctagattcattagcatcaatataaatgtgg 112
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 46.1 bits (23), Expect = 7e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 46 tgtgtctagattcattaacatcaatatgaat 76
||||||||||||| |||||||| ||||||||
Sbjct: 79 tgtgtctagattcgttaacatctatatgaat 49
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatat 72
|||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatat 82
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 7e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
||||||||||||||| ||||||||| ||| |||| ||||
Sbjct: 77 tgtctagattcattagcatcaatataaatatgggaaatg 39
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 tctagattcattaacatcaatatgaat 76
||||||||||||||||| |||||||||
Sbjct: 64 tctagattcattaacattaatatgaat 90
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 55 attcattaacatcaatatgaat 76
||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaat 49
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 attcattaacatcaatatgaatgtgggcaa 84
||||||||| ||| ||||||||||||||||
Sbjct: 49 attcattaatatctatatgaatgtgggcaa 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaat 32
|||||||||||||||| |||||||||
Sbjct: 74 ccacattcatatagatattaatgaat 49
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 agattcattaacatcaatatgaatgtgggcaatg 86
||||||||||| |||||| |||||||||| ||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatg 101
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 59 attaacatcaatatgaatgtgg 80
||||||||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 57 tcattaacatcaatatgaatgtgggcaatg 86
||||||||||| ||||||||||||| ||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatg 96
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 52 tagattcattaacatcaatatgaatgtggg 81
|||||||||||||||| ||||| |||||||
Sbjct: 30 tagattcattaacatctatatgtatgtggg 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaa 36
|||||| ||||||||| |||||||||||||
Sbjct: 62 ccacatacatatagatgttaatgaatctaa 33
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtggg 81
|||||||||||||||| ||||| |||||||
Sbjct: 34 tagattcattaacatctatatgtatgtggg 63
