miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 1e-44
Identities = 135/149 (90%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||||||| ||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 64 acgaatctaaatagatat--atgtctagattcattaacatcaatataaatatagaaaatg 121
| || |||| |||||||| |||||||||||||||| ||||||||| |||||||||||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 122 atagaatgacttacattgtgaaacggagg 150
|||||||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagg 153
Score = 137 bits (69), Expect = 5e-32
Identities = 132/152 (86%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||| | |||||||||||||||||||||||||||||||||| |||||| |||| ||
Sbjct: 160 actactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgc 101
Query: 62 taacgaatctaaatagatatatgt--ctagattcattaacatcaatataaatatagaaaa 119
||| ||||||| | | |||||| | ||||| ||||||||||||||| ||| | |||||
Sbjct: 100 taatgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaa 41
Query: 120 tgatagaatgacttacattgtgaaacggagga 151
|| |||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagga 9
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 167 bits (84), Expect = 6e-41
Identities = 135/151 (89%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||||| ||||||||||||| |||||||||||||||||| ||| |||| |||| || |
Sbjct: 160 actacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 101
Query: 62 taacgaatctaaatagatatat--gtctagattcattaacatcaatataaatatagaaaa 119
||| ||||||| ||| |||||| || ||||||||||||||||||||| ||||| |||||
Sbjct: 100 taatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaa 41
Query: 120 tgatagaatgacttacattgtgaaacggagg 150
|| ||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagg 10
Score = 151 bits (76), Expect = 3e-36
Identities = 127/143 (88%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| ||||||||||||||||||||||||||| |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatc 71
Query: 71 taaatagatatatgt--ctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||||| | |||||||||||||||||||||| ||| | | ||||| ||||||
Sbjct: 72 tatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctagaat 131
Query: 129 gacttacattgtgaaacggagga 151
|||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagga 154
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 128/142 (90%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
|||||| |||||||||||||||||||||||||| || |||| |||| || |||| |||||
Sbjct: 151 tccgttccacaatataagtcattctagcatttttcacattcatattgatattaatgaatc 92
Query: 71 taaatagatatat--gtctagattcattaacatcaatataaatatagaaaatgatagaat 128
||||||||||||| ||||||||||||||||| |||||||||| | | ||||| ||||||
Sbjct: 91 taaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagg 10
Score = 85.7 bits (43), Expect = 2e-16
Identities = 118/142 (83%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| ||| ||| |||| | |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaatc 71
Query: 71 taaatagatatatgtct--agattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||||| | | ||||||||||| |||||||| ||| | |||||| ||||||
Sbjct: 72 tagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatgctagaat 131
Query: 129 gacttacattgtgaaacggagg 150
|||||| |||||| ||||||||
Sbjct: 132 gacttatattgtggaacggagg 153
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 157 bits (79), Expect = 5e-38
Identities = 127/142 (89%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||| ||||||||| |||| |||| || |||| |||||
Sbjct: 151 tccgtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaatc 92
Query: 71 taaatagatatat--gtctagattcattaacatcaatataaatatagaaaatgatagaat 128
||||||||||||| |||||||||||||||||||| ||| ||| | | ||||| ||||||
Sbjct: 91 taaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagg 10
Score = 117 bits (59), Expect = 5e-26
Identities = 122/142 (85%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| ||| |||| || | || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatc 71
Query: 71 taaatagatatatgtct--agattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||||| | | ||||||||||| |||||||| ||| | ||||||| ||||||
Sbjct: 72 tagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatgttagaat 131
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagg 153
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 157 bits (79), Expect = 5e-38
Identities = 133/150 (88%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||||||||||||||||| |||||||| ||| |||| ||||||| ||
Sbjct: 159 ctacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtt 100
Query: 63 aacgaatctaaatag--atatatgtctagattcattaacatcaatataaatatagaaaat 120
|| ||||||| |||| |||||||||||||||||||||||||||||| ||| | | |||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaat 40
Query: 121 gatagaatgacttacattgtgaaacggagg 150
| || |||||||||||||||||||||||||
Sbjct: 39 gctataatgacttacattgtgaaacggagg 10
Score = 97.6 bits (49), Expect = 4e-20
Identities = 127/152 (83%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||| | ||||||||||||| ||||||||| ||||||| ||| |||| |||| || |
Sbjct: 3 actactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgt 62
Query: 62 taacgaatctaaatagatatatgt--ctagattcattaacatcaatataaatatagaaaa 119
||| ||||||| | | |||||| | |||||||||||||||| ||||| ||| | | |||
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaa 122
Query: 120 tgatagaatgacttacattgtgaaacggagga 151
|| || ||||||||| ||||||||||||||||
Sbjct: 123 tgctaaaatgacttatattgtgaaacggagga 154
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 153 bits (77), Expect = 8e-37
Identities = 125/141 (88%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
|||||| |||||| |||||||||||||||||| ||| |||| |||| || |||| |||||
Sbjct: 149 tccgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 90
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| | | ||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||
Sbjct: 89 tagacatatatatgtctacattcattaacatcaatatgaatgtagaaaatgctagaatga 30
Query: 131 cttacattgtgaaacggagga 151
||||||||||| |||||||||
Sbjct: 29 cttacattgtggaacggagga 9
Score = 141 bits (71), Expect = 3e-33
Identities = 128/147 (87%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| |||||| |||||| |||||||||||||||||||| | |||| |||| || |||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| |||| || | | |||||||||||||||||||||||||||||| ||| | | ||||| |
Sbjct: 65 atgaatgtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaatgct 124
Query: 124 agaatgacttacattgtgaaacggagg 150
|||||||||||||||||| ||||||||
Sbjct: 125 agaatgacttacattgtggaacggagg 151
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 132/150 (88%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||||||||||||||||| |||||||| ||| |||| |||| || ||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtt 63
Query: 63 aacgaatctaaatag--atatatgtctagattcattaacatcaatataaatatagaaaat 120
|| ||||||| |||| |||||||||||||||||||| ||||||||||||| | |||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaat 123
Query: 121 gatagaatgacttacattgtgaaacggagg 150
| ||||||| |||| |||||||||||||||
Sbjct: 124 gctagaatggcttatattgtgaaacggagg 153
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/143 (83%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
|||||||||||||||||| |||||||||||||| || ||| |||| || ||| |||||
Sbjct: 151 tccgtttcacaatataagccattctagcatttttcacatttatattgatgataatgaatc 92
Query: 71 t--aaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
| | ||| |||| | ||||||||||||||||| ||||| ||| | | ||||| || |||
Sbjct: 91 tagacatatatatctatctagattcattaacataaatatgaatgtgggaaatgctacaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||| ||||||||||||||||
Sbjct: 31 gacttatattgtgaaacggagga 9
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 147 bits (74), Expect = 5e-35
Identities = 126/142 (88%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| ||| |||| |||| || |||| |||||
Sbjct: 150 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 91
Query: 71 taaatagatatatgt-ctagattcattaacatcaatataaatatagaaaatgatagaatg 129
|||| | || ||||| |||||||||||||||||||||| ||| | | ||||| |||||||
Sbjct: 90 taaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgctagaatg 31
Query: 130 acttacattgtgaaacggagga 151
||||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggagga 9
Score = 135 bits (68), Expect = 2e-31
Identities = 129/148 (87%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| ||| |||| |||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 acgaatctaa-atagatatatgtctagattcattaacatcaatataaatatagaaaatga 122
| ||||||| | | | |||||| ||||||||||||||||||||| ||| | | |||||
Sbjct: 65 atgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgc 124
Query: 123 tagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagg 152
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 131/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| | |||||| |||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 64 acgaatctaaatagatat--atgtctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| |||||||| ||||||| |||||||||||||||||| ||| ||| |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 122 atagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
Score = 127 bits (64), Expect = 5e-29
Identities = 124/143 (86%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||| |||| |||| |||| || |||| ||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaata 92
Query: 71 taaatagatatatgt--ctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | ||||| | |||||||||||||||||||||| ||||||| ||||| ||||||
Sbjct: 91 tagacatctatatctatctagattcattaacatcaatatgaatataggaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagga 9
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 131/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| |||||||||||||||||||||||||||||||| || |||| |||| || ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 64 acgaatctaaatagatat--atgtctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| |||||||| |||||||||||||||| ||||||||| ||| | | |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 122 atagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagg 153
Score = 87.7 bits (44), Expect = 4e-17
Identities = 119/143 (83%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||| ||||| ||| |||| |||| || ||| |||||
Sbjct: 151 tccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaatc 92
Query: 71 taaatagatatatgt--ctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||||| | |||||||||||| |||||||| ||| | ||||| ||||||
Sbjct: 91 tagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||| ||||||||||||||||
Sbjct: 31 gacttatattgtgaaacggagga 9
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 131/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| ||||||||| |||||||| ||| |||| ||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 64 acgaatctaaatagatat--atgtctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| |||||||| |||||||||||||||||||| ||||| ||| | || ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 122 atagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
Score = 123 bits (62), Expect = 8e-28
Identities = 131/153 (85%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatc 60
||||||| | ||||||||||||| ||||||||||||||||| |||| |||| |||||||
Sbjct: 161 aactactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatg 102
Query: 61 ttaacgaatct--aaatagatatatgtctagattcattaacatcaatataaatatagaaa 118
|||| |||||| | ||| |||| | |||||||||||||||| ||||| ||| | | ||
Sbjct: 101 ttaatgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaa 42
Query: 119 atgatagaatgacttacattgtgaaacggagga 151
||| || ||||||||||||||||||||||||||
Sbjct: 41 atgctaaaatgacttacattgtgaaacggagga 9
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 131/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||||||| || | |||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 64 acgaatctaaatagatat--atgtctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| |||||||| ||||||||||||||||||| |||||| ||| | | ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 122 atagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
Score = 119 bits (60), Expect = 1e-26
Identities = 123/143 (86%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| ||||||||||||| |||| ||| |||| |||| | |||| |||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatc 92
Query: 71 taaatagatatatgt--ctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||||| | |||||||||||||||||||||| || | ||||||| ||||||
Sbjct: 91 tagacatatatatctatctagattcattaacatcaatatggatgtggaaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagga 9
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 145 bits (73), Expect = 2e-34
Identities = 124/141 (87%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| ||| |||| |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| |||| ||||||| ||||||||||||||||||||||| | | ||||| ||||||||
Sbjct: 72 tagataggcatatgtccagattcattaacatcaatataaacgtgggaaatgctagaatga 131
Query: 131 cttacattgtgaaacggagga 151
|||| ||||||||||||||||
Sbjct: 132 cttatattgtgaaacggagga 152
Score = 117 bits (59), Expect = 5e-26
Identities = 125/147 (85%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| |||||||||||||||||||||||||||||||| ||| || |||| || |||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| |||||| | | || | ||||||||||||||||||||||| ||| | | ||||| |
Sbjct: 96 atgaatctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgct 37
Query: 124 agaatgacttacattgtgaaacggagg 150
|||||||||||||||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 132/151 (87%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||||| |||||||||||||||||||||||||| | ||||||| |||| ||||||| |
Sbjct: 3 actacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgt 62
Query: 62 taacgaatctaaat--agatatatgtctagattcattaacatcaatataaatatagaaaa 119
||| ||||||| || | |||||| |||||||||||||| |||||||| ||| | | |||
Sbjct: 63 taatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaa 122
Query: 120 tgatagaatgacttacattgtgaaacggagg 150
|| |||||||||||| |||||||||||||||
Sbjct: 123 tgctagaatgacttatattgtgaaacggagg 153
Score = 135 bits (68), Expect = 2e-31
Identities = 125/143 (87%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
|||||||||||||||||||||||||||||||| ||| |||| |||| || |||| |||||
Sbjct: 151 tccgtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaatc 92
Query: 71 taaatagatata--tgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| ||| ||||| | ||||||||||||||||| ||||| ||| | ||||| | ||||||
Sbjct: 91 tagatatatatatttatctagattcattaacattaatatgaatgtggaaaaagttagaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||| ||||||||||||||||
Sbjct: 31 gacttatattgtgaaacggagga 9
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 126/143 (88%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||| ||||||| |||||||||||||||||| ||| |||| |||| || |||| |||||
Sbjct: 151 tccgtatcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaatc 92
Query: 71 taaatagatatat--gtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| |||||||||| |||||||||||||||||||||||||||| | | ||||| | |||
Sbjct: 91 tagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatgcaaaaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagga 9
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/149 (83%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| ||||||||| | |||||| ||| ||| |||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 64 acgaatctaaatagatatatgt--ctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| | | |||||| | ||||||||||||| |||||||| ||| | | |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 122 atagaatgacttacattgtgaaacggagg 150
|||||||||||||||||||| |||||||
Sbjct: 125 ctagaatgacttacattgtgatacggagg 153
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 143 bits (72), Expect = 8e-34
Identities = 130/148 (87%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| |||||||| |||| |||||||||||||||||| || |||| |||| || ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 64 acgaatctaaataga-tatatgtctagattcattaacatcaatataaatatagaaaatga 122
| ||||||| ||||| ||||| ||||||||||||||||| ||||||||||| | |||||
Sbjct: 65 atgaatctagatagaatatatatctagattcattaacattaatataaatatgggaaatgt 124
Query: 123 tagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagg 152
Score = 119 bits (60), Expect = 1e-26
Identities = 130/152 (85%), Gaps = 1/152 (0%)
Strand = Plus / Minus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatc 60
||||||| | ||||||||||||| |||||||||||| ||||| ||||||| |||||||
Sbjct: 160 aactactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatg 101
Query: 61 ttaacgaatctaaatagata-tatgtctagattcattaacatcaatataaatatagaaaa 119
|||| ||||||| ||| ||| | | ||||||||||||| ||||||||| ||| | |||
Sbjct: 100 ttaatgaatctagatatatattctatctagattcattaccatcaatatgaatgtgagaaa 41
Query: 120 tgatagaatgacttacattgtgaaacggagga 151
|| ||||||||||||||||| |||||||||||
Sbjct: 40 tgctagaatgacttacattgcgaaacggagga 9
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 126/143 (88%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| ||| |||| |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 71 taaatagatat--atgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| |||||||| ||||||| |||||||||||||||||| ||| | | |||| ||||||
Sbjct: 72 tagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattagaat 131
Query: 129 gacttacattgtgaaacggagga 151
|||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagga 154
Score = 117 bits (59), Expect = 5e-26
Identities = 128/150 (85%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||||||| |||||||||||| |||| ||| |||| |||| || ||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtt 100
Query: 63 aacgaatctaaatagatatatgt--ctagattcattaacatcaatataaatatagaaaat 120
|| |||| || | | |||||| | |||||||||||||||||||||| ||| | | ||||
Sbjct: 99 aatgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaat 40
Query: 121 gatagaatgacttacattgtgaaacggagg 150
| ||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 125/142 (88%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||| ||||| || |||| |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 71 taaatagatat--atgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| |||||||| ||||||||||||||||| ||||| || ||| ||||||||| ||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagg 153
Score = 113 bits (57), Expect = 7e-25
Identities = 120/140 (85%), Gaps = 2/140 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||||| | |||| | || || |||| |||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaatc 92
Query: 71 t--aaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
| | ||| |||| | ||||||||||||||||||||||| ||| | ||||| ||||||
Sbjct: 91 tagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatggtagaat 32
Query: 129 gacttacattgtgaaacgga 148
||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 125/142 (88%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| ||||||||||||| ||||| || |||| |||| || |||| |||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaatc 92
Query: 71 taaatagatatat--gtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| |||||||||| ||||||||||||||| |||||||| ||| | | ||||| ||||||
Sbjct: 91 tagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgttagaat 32
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagg 10
Score = 109 bits (55), Expect = 1e-23
Identities = 121/142 (85%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||| ||||| ||| |||| |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaatc 71
Query: 71 taaatagatatatgt--ctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||||| | ||||||||||||| |||||||| ||| | ||||| ||||||
Sbjct: 72 tagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaatactagaat 131
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagg 153
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 139 bits (70), Expect = 1e-32
Identities = 128/147 (87%), Gaps = 4/147 (2%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| ||| |||| |||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| ||||||| ||||||||||||||||||||| ||||||||| ||| ||| ||||| |
Sbjct: 65 atgaatcta----gatatatgtctagattcattagcatcaatatgaatgtaggaaatgct 120
Query: 124 agaatgacttacattgtgaaacggagg 150
||||||||||| |||||||||||||||
Sbjct: 121 agaatgacttatattgtgaaacggagg 147
Score = 121 bits (61), Expect = 3e-27
Identities = 128/150 (85%), Gaps = 4/150 (2%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||| | |||||||||||||||||||||||||||||||| | | |||| |||| ||
Sbjct: 154 actactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgc 95
Query: 62 taacgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatg 121
||| ||||||| || |||| ||||||||||||| ||||||||| ||| | | |||||
Sbjct: 94 taatgaatcta----gacatatatctagattcattagcatcaatatgaatgtgggaaatg 39
Query: 122 atagaatgacttacattgtgaaacggagga 151
|||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagga 9
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 124/142 (87%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||||||| |||| ||| || ||| ||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaatt 92
Query: 71 taaatagatatatg--tctagattcattaacatcaatataaatatagaaaatgatagaat 128
|||| | ||||||| | ||||||||||| |||| |||| ||||||||||||| ||||||
Sbjct: 91 taaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatgttagaat 32
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagg 10
Score = 101 bits (51), Expect = 3e-21
Identities = 120/142 (84%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||| ||||||| |||||| ||| || ||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaatc 71
Query: 71 taaat--agatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||||||| || |||||||| |||| |||| ||| | ||||||| ||||||
Sbjct: 72 tatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatgctagaat 131
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagg 153
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| || |||| ||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 64 acgaatctaaatagatatat--gtctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| |||||||||| ||||||||||||||| |||||||| ||| | | |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 122 atagaatgacttacattgtgaaacggagg 150
|||||||||||||||||||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagg 10
Score = 87.7 bits (44), Expect = 4e-17
Identities = 119/143 (83%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||| ||||| ||| |||| |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaatc 71
Query: 71 t--aaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
| | ||| |||| | ||||||||||||||| |||| ||| | ||||| ||||||
Sbjct: 72 tagacatatatatctatctagattcattaactaatatatgaatgtgagaaatgctagaat 131
Query: 129 gacttacattgtgaaacggagga 151
|||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagga 154
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| || |||||||||||||| |||| |||| ||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 64 acgaatctaa--atagatatatgtctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| ||| ||||| |||||||||||||||||||||||| ||| | |||||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 122 atagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
Score = 127 bits (64), Expect = 5e-29
Identities = 124/143 (86%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||||||| |||| |||| || |||| |||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatc 92
Query: 71 taaa--tagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | || ||||||| |||||||||||| |||| |||| ||| | || |||| ||||||
Sbjct: 91 tagacttatatatatgcctagattcattagcatctatatgaatgtggacaatgctagaat 32
Query: 129 gacttacattgtgaaacggagga 151
||| |||||||||||||||||||
Sbjct: 31 gacatacattgtgaaacggagga 9
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 127 bits (64), Expect = 5e-29
Identities = 124/142 (87%), Gaps = 4/142 (2%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| || ||| |||| || |||| ||||
Sbjct: 149 tccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaatc 92
Query: 71 taaatag--atatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| |||| |||||||||||||||||||||||||||||| ||||| | ||||| | ||||
Sbjct: 91 tatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaat 32
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagg 10
Score = 111 bits (56), Expect = 3e-24
Identities = 122/142 (85%), Gaps = 4/142 (2%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||| ||||||| |||||||| |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatc 71
Query: 71 t--aaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
| | ||| |||| | | |||||| |||||||||||||||||| | ||||| ||||||
Sbjct: 72 tagacatatatatctatatagatttattaacatcaatataaatgt--gaaatgctagaat 129
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 130 gacttacattgtgaaacggagg 151
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 125/144 (86%), Gaps = 6/144 (4%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaat- 69
||||||||||||| ||||||||| |||||||||||| |||| |||| || |||| |||
Sbjct: 12 tccgtttcacaatgtaagtcattatagcattttccacattcatatttatattaataaatt 71
Query: 70 ---ctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgataga 126
|||||| |||||||||||||||||||||||||||||| ||| | | ||||| ||||
Sbjct: 72 tagctaaat--atatatgtctagattcattaacatcaatatgaatgtgggaaatgctaga 129
Query: 127 atgacttacattgtgaaacggagg 150
||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagg 153
Score = 105 bits (53), Expect = 2e-22
Identities = 128/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatc 60
||||||| | ||||||||||||| |||||||||||||||||| ||| |||| |||| ||
Sbjct: 161 aactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 102
Query: 61 ttaacgaatctaaatagatatatgt--ctagattcattaacatcaatataaatatagaaa 118
|||| ||||||| | | |||||| | ||| ||| ||||| || ||||| ||| | ||||
Sbjct: 101 ttaatgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaa 42
Query: 119 atgatagaatgacttacattgtgaaacggagg 150
||| || |||||||||||||||||||||||||
Sbjct: 41 atgctataatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 127 bits (64), Expect = 5e-29
Identities = 124/142 (87%), Gaps = 4/142 (2%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| || ||| |||| || |||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaatc 69
Query: 71 taaatag--atatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| |||| |||||||||||||||||||||||||||||| ||||| | ||||| | ||||
Sbjct: 70 tatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaat 129
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 130 gacttacattgtgaaacggagg 151
Score = 111 bits (56), Expect = 3e-24
Identities = 122/142 (85%), Gaps = 4/142 (2%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||| ||||||| |||||||| |||| || |||| |||||
Sbjct: 149 tccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatc 90
Query: 71 t--aaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
| | ||| |||| | | |||||| |||||||||||||||||| | ||||| ||||||
Sbjct: 89 tagacatatatatctatatagatttattaacatcaatataaatgt--gaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 125 bits (63), Expect = 2e-28
Identities = 126/147 (85%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||||||||||||||| |||||| ||| |||| || | || |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| |||| || | | |||||| ||||||||||||||||| | ||| ||| | |||||| |
Sbjct: 65 atgaatttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgct 124
Query: 124 agaatgacttacattgtgaaacggagg 150
|||||||||||||||||||||||||||
Sbjct: 125 agaatgacttacattgtgaaacggagg 151
Score = 121 bits (61), Expect = 3e-27
Identities = 121/141 (85%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| ||||||||||||||||||| || |||| || | || |||| |||||
Sbjct: 149 tccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaatc 90
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| ||| ||||||||||| |||||||||||| | ||| ||| | | ||||| |||||||
Sbjct: 89 tagatatatatatgtctaaattcattaacatgagtatgaatgtgggaaatgccagaatga 30
Query: 131 cttacattgtgaaacggagga 151
|||| ||||||||||||||||
Sbjct: 29 cttatattgtgaaacggagga 9
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 125 bits (63), Expect = 2e-28
Identities = 121/141 (85%), Gaps = 7/141 (4%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| ||| |||| |||| || |||| |||||
Sbjct: 142 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 83
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| | |||||||||||||||||||||||||| ||| | | ||||| ||||||||
Sbjct: 82 taga-------atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 30
Query: 131 cttacattgtgaaacggagga 151
|||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagga 9
Score = 123 bits (62), Expect = 8e-28
Identities = 128/149 (85%), Gaps = 7/149 (4%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||||| ||||||||||||| |||||||||||||||||| ||| |||| |||| || |
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 62 taacgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatg 121
||| ||||||| || || ||||||||||||||||||||||| ||| | | |||||
Sbjct: 63 taatgaatcta----gacat---tctagattcattaacatcaatatgaatgtgggaaatg 115
Query: 122 atagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 116 ctagaatgacttacattgtgaaacggagg 144
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 125 bits (63), Expect = 2e-28
Identities = 120/140 (85%), Gaps = 8/140 (5%)
Strand = Plus / Minus
Query: 12 ccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatct 71
|||||||||||| |||||||||||||||||| ||| |||| |||| || |||| ||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat-- 83
Query: 72 aaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgac 131
|||||||||||||||||||||||| ||||||||| | | ||||| |||||||||
Sbjct: 82 ------atatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgac 29
Query: 132 ttacattgtgaaacggagga 151
||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagga 9
Score = 101 bits (51), Expect = 3e-21
Identities = 120/144 (83%), Gaps = 8/144 (5%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| ||| ||| ||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| ||||||| | | |||||| |||||||||||||||| ||| | | ||||| |
Sbjct: 65 atgaatctagacatatatat--------tcattaacatcaatatgaatgtgggaaatgct 116
Query: 124 agaatgacttacattgtgaaacgg 147
||||||||||||||||||||||||
Sbjct: 117 agaatgacttacattgtgaaacgg 140
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 128/149 (85%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| ||||||||||||||||| |||||||| ||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 64 acgaatctaaat--agatatatgtctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| | | |||||||||||||||||||||||| ||||| ||| | |||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 122 atagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
Score = 119 bits (60), Expect = 1e-26
Identities = 123/143 (86%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| || |||| ||||||| |||| |||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaatc 92
Query: 71 taaatagatatatgt--ctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||||| ||||||||||||||||| |||| ||||| | |||| ||||||
Sbjct: 91 tagacatatatatccaactagattcattaacatccatatgaatatgggtaatgctagaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagga 9
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 121/140 (86%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| ||| |||| |||| | |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaatc 71
Query: 71 taaatagatat--atgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| |||||||| |||||||||||||||| ||||||||| ||| | | ||||| | ||||
Sbjct: 72 tagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatggtggaat 131
Query: 129 gacttacattgtgaaacgga 148
|||||||||| |||||||||
Sbjct: 132 gacttacattatgaaacgga 151
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/151 (83%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||| | ||||||||| ||| |||||||||| | ||||| ||| |||| |||| ||
Sbjct: 160 actactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatgg 101
Query: 62 taacgaatctaaatagatatatgt--ctagattcattaacatcaatataaatatagaaaa 119
||| ||||||| | | |||||| | ||||||||||||||| |||||| ||| | | |||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaa 41
Query: 120 tgatagaatgacttacattgtgaaacggagg 150
|| ||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 130/152 (85%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatc 60
||||||||| |||||| |||| ||||||||||||||| ||||||||||||| |||| ||
Sbjct: 2 aactacttcctccgttccacagtataagtcattctagtattttccatattcatattgatg 61
Query: 61 ttaacgaatctaaatag--atatatgtctagattcattaacatcaatataaatatagaaa 118
||| |||| || |||| |||||||| ||||||||||| ||||||||| ||||| ||
Sbjct: 62 ctaatgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaa 121
Query: 119 atgatagaatgacttacattgtgaaacggagg 150
||| |||||||||||| |||||| ||||||||
Sbjct: 122 atgttagaatgacttatattgtggaacggagg 153
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/143 (83%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
|||||| ||||||||||||||||||| ||||| ||||||| |||| || ||| |||||
Sbjct: 151 tccgttccacaatataagtcattctaacatttctcatattcatattgatgctaatgaatc 92
Query: 71 taaatagatatatgt--ctagattcattaacatcaatataaatatagaaaatgatagaat 128
|||| | |||||| | ||| |||||||| ||||||||| ||||| |||||| ||||||
Sbjct: 91 taaacatatatatctatctaaattcattagcatcaatatgaatatggaaaatactagaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||| | |||| |||||||||
Sbjct: 31 gacttatactgtggaacggagga 9
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 121 bits (61), Expect = 3e-27
Identities = 131/153 (85%), Gaps = 6/153 (3%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtat----taat 59
|||||| ||||||||||||| |||||||||||||||||| ||||||| || | ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 60 cttaacgaatctaaatagatat--atgtctagattcattaacatcaatataaatatagaa 117
|||| ||||||| |||||||| |||||||||||||||||||||| ||| ||| | | |
Sbjct: 65 gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124
Query: 118 aatgatagaatgacttacattgtgaaacggagg 150
|||| ||||||||||||||||||||||||||||
Sbjct: 125 aatgctagaatgacttacattgtgaaacggagg 157
Score = 95.6 bits (48), Expect = 2e-19
Identities = 130/156 (83%), Gaps = 6/156 (3%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||| | ||||||||||||| |||||||||||||||||| ||| |||| || | || |
Sbjct: 164 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgt 105
Query: 62 taacgaatct--aaatagatatatgtctagattcattaacatca----atataaatatag 115
||| |||||| | ||| |||| | ||||||||||||||||||| ||| |||||
Sbjct: 104 taatgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgc 45
Query: 116 aaaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagga 9
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 119 bits (60), Expect = 1e-26
Identities = 121/141 (85%), Gaps = 4/141 (2%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||||||||||||||||| ||| |||| |||| || | || |||||
Sbjct: 145 tccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatc 86
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|||| | ||||||||||||||| |||||||||| ||| | | ||||||||||||||
Sbjct: 85 ----tagacagatgtctagattcattgacatcaatatgaatgtgggaaatgatagaatga 30
Query: 131 cttacattgtgaaacggagga 151
|||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagga 9
Score = 107 bits (54), Expect = 5e-23
Identities = 124/147 (84%), Gaps = 4/147 (2%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||| ||||| ||| |||| |||| || | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| ||||||| || || |||||||||||||| |||||||||| ||| | | ||||| |
Sbjct: 65 atgaatcta----gacatctgtctagattcattgacatcaatatgaatgtgggaaatgct 120
Query: 124 agaatgacttacattgtgaaacggagg 150
||||||||||||||| |||||||||||
Sbjct: 121 agaatgacttacattatgaaacggagg 147
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 117 bits (59), Expect = 5e-26
Identities = 123/142 (86%), Gaps = 3/142 (2%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||| ||||| ||||| ||||||| ||| ||| |||| |||| || |||| |||||
Sbjct: 12 tccgttttacaatgtaagttattctagt-tttcccacattcatattgatattaatgaatc 70
Query: 71 taaatagatat--atgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| |||||||| |||||||||||||||||||||||||| ||| | |||||| ||||||
Sbjct: 71 tagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaatattagaat 130
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 131 gacttacattgtgaaacggagg 152
Score = 77.8 bits (39), Expect = 4e-14
Identities = 118/142 (83%), Gaps = 3/142 (2%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||| |||||||| |||| |||| || |||| |||||
Sbjct: 150 tccgtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaatc 91
Query: 71 t--aaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
| | ||| |||| | |||||||||||||| |||||||| ||| | | ||| ||||||
Sbjct: 90 tagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa-actagaat 32
Query: 129 gacttacattgtgaaacggagg 150
||||||||||| |||||||||
Sbjct: 31 aacttacattgtaaaacggagg 10
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 117 bits (59), Expect = 5e-26
Identities = 126/147 (85%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||||||||||||||||| |||| ||| |||| |||| || ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| ||||||| ||||||||| |||||||| |||| ||||||||| ||| | | ||||| |
Sbjct: 65 atgaatctagatagatata-gtctagatccattggcatcaatatgaatgtgggaaatggt 123
Query: 124 agaatgacttacattgtgaaacggagg 150
|||||||||||||| |||||||||||
Sbjct: 124 ggaatgacttacattatgaaacggagg 150
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||| |||||||| ||| | | |||| |||||||||||| |||||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 145 cggagga 151
|||||||
Sbjct: 15 cggagga 9
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 122/142 (85%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| ||| |||| ||| || || | |||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaatc 92
Query: 71 taaatagatat--atgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|||||| |||| ||||||||||||||||||||| |||| ||| | |||||||| |||
Sbjct: 91 taaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaaat 32
Query: 129 gacttacattgtgaaacggagg 150
|||||||| |||||||||||||
Sbjct: 31 gacttacaatgtgaaacggagg 10
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||||| | ||||||||| |||||| |||| ||| | | ||||| |||||||||||||||
Sbjct: 81 atatatatttagattcatcaacatctatatgaatgtgggaaatgctagaatgacttacat 140
Query: 138 tgtgaaacggagg 150
|||||||||||||
Sbjct: 141 tgtgaaacggagg 153
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 127/149 (85%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| ||| |||| |||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 64 acgaatctaaatag--atatatgtctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| |||| |||||| ||||||||||||| ||||||||| ||| | | ||||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 122 atagaatgacttacattgtgaaacggagg 150
|| ||||||||| |||||||||||||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagg 153
Score = 105 bits (53), Expect = 2e-22
Identities = 128/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||| | ||||||||||||| ||||||||| ||| |||| ||| ||| |||| ||
Sbjct: 160 actactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatgg 101
Query: 62 taacgaatcta--aatagatatatgtctagattcattaacatcaatataaatatagaaaa 119
||| ||||||| |||| |||| | ||||||||||||||| ||||||| ||| | | |||
Sbjct: 100 taatgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaa 41
Query: 120 tgatagaatgacttacattgtgaaacggagga 151
|| |||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagga 9
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 115 bits (58), Expect = 2e-25
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 61 ttaacgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaat 120
|||| ||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||
Sbjct: 55 ttaatgaatctagatagatatatgtctagattcattaacatcaatatgaatatgggaaat 114
Query: 121 gatagaatgacttacattgtgaaacggagg 150
| || ||||||||| |||||||||||||||
Sbjct: 115 gctaaaatgacttatattgtgaaacggagg 144
Score = 101 bits (51), Expect = 3e-21
Identities = 84/95 (88%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||||||||||||| |||||||| |||||||| |||| || |||| |||||
Sbjct: 142 tccgtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaatc 83
Query: 71 taaatagatatatgtctagattcattaacatcaat 105
|| | | |||| | |||||||||||||||||||||
Sbjct: 82 tagacatatatctatctagattcattaacatcaat 48
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 115 bits (58), Expect = 2e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagg 150
||||||
Sbjct: 15 cggagg 10
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||||| |||||| |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 94 attaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||||||||| ||| ||| |||| |||||||||||| ||||||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggagga 134
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 127/149 (85%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| |||||||||||| ||||||||| |||||||| ||| ||| |||| || |||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 64 acgaatctaaataga--tatatgtctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| ||||| ||||||||||||||||| ||||||||||||||| | | |||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 122 atagaatgacttacattgtgaaacggagg 150
| |||||||||| ||||||||||||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagg 10
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||||||| | | ||||| || |||||||||| ||||||||
Sbjct: 88 tctagattcattaacatcaatataaatgtgggaaatgctaaaatgacttactttgtgaaa 147
Query: 145 cggagga 151
|||||||
Sbjct: 148 cggagga 154
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 113 bits (57), Expect = 7e-25
Identities = 122/143 (85%), Gaps = 8/143 (5%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||||||| |||| ||| || |||| || |
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatgagtt 71
Query: 71 taaatagata--tatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| ||||||| ||||||||||| |||||||||| ||||| ||||||| ||||||
Sbjct: 72 tagatagatacatatgtctagat------acatcaatatgaatatggaaaatgctagaat 125
Query: 129 gacttacattgtgaaacggagga 151
|||||||||||||||||||||||
Sbjct: 126 gacttacattgtgaaacggagga 148
Score = 93.7 bits (47), Expect = 7e-19
Identities = 124/149 (83%), Gaps = 8/149 (5%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| ||||||||||||||||||||||||||| |||| ||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgat---- 97
Query: 64 acgaatct--aaatagatatatgtctagattcattaacatcaatataaatatagaaaatg 121
| |||| | ||| ||| | |||| | ||||||||||| |||| ||| | |||||||
Sbjct: 96 --gtatctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39
Query: 122 atagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 111 bits (56), Expect = 3e-24
Identities = 123/147 (83%), Gaps = 10/147 (6%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| || |||| |||| || |||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| ||||||| || |||||||||||| |||||||||||||| ||||||| |
Sbjct: 65 atgaatctagatg----------tagattcattaatatcaatataaatatggaaaatgct 114
Query: 124 agaatgacttacattgtgaaacggagg 150
|||||||||||||||||||||||||||
Sbjct: 115 agaatgacttacattgtgaaacggagg 141
Score = 101 bits (51), Expect = 3e-21
Identities = 115/138 (83%), Gaps = 10/138 (7%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||||||||||| |||| || |||| |||||
Sbjct: 139 tccgtttcacaatgtaagtcattctagcattttccatatttatattgatattaatgaatc 80
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| || |||||||||||||||||||||| ||| | ||||| ||||||||
Sbjct: 79 tacat----------ctagattcattaacatcaatatgaatgtgagaaatgctagaatga 30
Query: 131 cttacattgtgaaacgga 148
||||||||||||||||||
Sbjct: 29 cttacattgtgaaacgga 12
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 84 gtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaa 143
|||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 144 acggagg 150
|||||||
Sbjct: 134 acggagg 140
Score = 101 bits (51), Expect = 3e-21
Identities = 117/141 (82%), Gaps = 11/141 (7%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| ||||||||||||||||||||||||||| |||| || |||| |||||
Sbjct: 138 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatc 79
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| | ||||||| |||||||||||||||||| | ||||| ||||||||
Sbjct: 78 ta-----------gactagatttattaacatcaatataaatgtgagaaatgctagaatga 30
Query: 131 cttacattgtgaaacggagga 151
|||||||| ||||||||||||
Sbjct: 29 cttacattatgaaacggagga 9
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 109 bits (55), Expect = 1e-23
Identities = 97/110 (88%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 26 aagtcattctagcattttccatattcgtattaatcttaacgaatctaaatagatatat-- 83
||||||||||||||||| ||| |||| |||| || |||| ||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 84 gtctagattcattaacatcaatataaatatagaaaatgatagaatgactt 133
|||||||||||||||||||||||| ||| | | ||||| |||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 69.9 bits (35), Expect = 1e-11
Identities = 92/110 (83%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 26 aagtcattctagcattttccatattcgtattaatcttaacgaatctaaatagatatatgt 85
||||||||||||||||| ||| |||| |||| || |||| ||||||| | | |||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 86 ct--agattcattaacatcaatataaatatagaaaatgatagaatgactt 133
| |||||||||||||||||||| ||| | | ||||| |||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| ||| |||| || | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 64 acgaatctaaa--tagatatatgtctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| | | |||||||||||||||||||| ||||||||| || | |||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 122 atagaatgacttacattgtgaaacggagg 150
|| |||||||||||||||||||||||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagg 153
Score = 87.7 bits (44), Expect = 4e-17
Identities = 119/143 (83%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| ||||||||| |||||||| || || | |||| || ||| |||||
Sbjct: 151 tccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaatc 92
Query: 71 taaatagatatat--gtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||||| ||||||||||||||| || | ||| ||| | | ||||| ||||||
Sbjct: 91 tagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagga 9
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 123/148 (83%), Gaps = 10/148 (6%)
Strand = Plus / Plus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||| ||| |||||||||||||||||||||| |||| |||| || ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 63 aacgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatga 122
|| ||||||| ||||||| ||||||||||||||||| ||| | | |||||
Sbjct: 64 aatgaatcta----------tgtctagtttcattaacatcaatatgaatgtgggaaatgc 113
Query: 123 tagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||| ||||
Sbjct: 114 tagaatgacttacattgtgaaaccgagg 141
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
||||||||||||||||||||| ||| | ||||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 147 gagga 151
|||||
Sbjct: 13 gagga 9
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 79 tatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacatt 138
||||||||||||||||||||||||||||| ||| | | ||||| ||||||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 139 gtgaaacggagga 151
|||||||||||||
Sbjct: 21 gtgaaacggagga 9
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| ||| |||| |||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 acgaatcta 72
| |||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||||||||||||||||||||||||||||| ||| | | ||||| |||||||||||||||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacat 23
Query: 138 tgtgaaacggagg 150
|||||||||||||
Sbjct: 22 tgtgaaacggagg 10
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| ||| |||| |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 98 acatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||||| || || |||||| |||||||||||||||||||||||||||||
Sbjct: 83 acatcaatatgtatgtacaaaatgctagaatgacttacattgtgaaacggagga 136
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 105 bits (53), Expect = 2e-22
Identities = 121/143 (84%), Gaps = 8/143 (5%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||| ||||||| |||| |||| || |||| || |
Sbjct: 145 tccgtttcacaatgtaagtcattctagccttttccacattcatattgatgttaatgagtt 86
Query: 71 taaatagata--tatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| ||||||| ||||||||||| |||||||||| ||| | ||||||| ||||||
Sbjct: 85 tagatagatacatatgtctagat------acatcaatatgaatgtggaaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagga 9
Score = 85.7 bits (43), Expect = 2e-16
Identities = 123/149 (82%), Gaps = 8/149 (5%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||||||| |||| |||| || |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt-- 62
Query: 64 acgaatctaaatagatatatgt--ctagattcattaacatcaatataaatatagaaaatg 121
||||| | | || ||| | ||| | |||||||||||||||| ||| | ||||| |
Sbjct: 63 ----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 122 atagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggagg 147
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 83 tgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtga 142
||||||||||||||||||||||||| ||||| | ||||| ||||||||||||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 143 aacggagg 150
||||||||
Sbjct: 127 aacggagg 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| |||||||| |||| || |||| |||||
Sbjct: 132 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatc 73
Query: 71 ta 72
||
Sbjct: 72 ta 71
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 103 bits (52), Expect = 7e-22
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 68 atctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaa 127
||||| |||||||||||||||||| ||||||||||||||| ||| | | ||||| |||||
Sbjct: 42 atctagatagatatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaa 101
Query: 128 tgacttacattgtgaaacggagga 151
||||||||||| ||||||||||||
Sbjct: 102 tgacttacattatgaaacggagga 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 80/96 (83%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||| ||| |||||||||||||||||| ||| |||| |||| || ||
Sbjct: 130 ctacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 71
Query: 63 aacgaatctaaatagatatatgtctagattcattaa 98
|| | ||||| | | |||| | ||||||| ||||||
Sbjct: 70 aatggatctagacatatatctatctagatccattaa 35
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 103 bits (52), Expect = 7e-22
Identities = 122/147 (82%), Gaps = 10/147 (6%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| || |||| |||| || |||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| ||||||| || |||||||||||| |||||||||||||| ||||||| |
Sbjct: 65 atgaatctagatg----------tagattcattaatatcaatataaatatggaaaatgct 114
Query: 124 agaatgacttacattgtgaaacggagg 150
| |||||||||||||||||||||||||
Sbjct: 115 ataatgacttacattgtgaaacggagg 141
Score = 93.7 bits (47), Expect = 7e-19
Identities = 114/138 (82%), Gaps = 10/138 (7%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| ||||||||| |||||||||||||||| |||| || |||| |||||
Sbjct: 139 tccgtttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaatc 80
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| || |||||||||||||||||||||| ||| | ||||| ||||||||
Sbjct: 79 tacat----------ctagattcattaacatcaatatgaatgtgagaaatgctagaatga 30
Query: 131 cttacattgtgaaacgga 148
||||||||||||||||||
Sbjct: 29 cttacattgtgaaacgga 12
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 127/151 (84%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||| | |||||| || ||| |||||||||||| ||||| ||| |||| ||| | |
Sbjct: 3 actactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgt 62
Query: 62 taacgaatctaaatagatata--tgtctagattcattaacatcaatataaatatagaaaa 119
||| ||||||| ||| ||||| |||||||||||||||||| | |||| ||| | |||||
Sbjct: 63 taatgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaa 122
Query: 120 tgatagaatgacttacattgtgaaacggagg 150
|| ||||||||||||||||||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagg 153
Score = 89.7 bits (45), Expect = 1e-17
Identities = 117/140 (83%), Gaps = 2/140 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||||||| |||| ||| | |||| |||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatc 92
Query: 71 t--aaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
| | || |||||| |||||||||||||||| | |||| ||| | | ||||| ||||||
Sbjct: 91 tagacatctatatatatctagattcattaacacctatatgaatgtgggaaatgttagaat 32
Query: 129 gacttacattgtgaaacgga 148
|||||||||| || ||||||
Sbjct: 31 gacttacattatggaacgga 12
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 83 tgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtga 142
||||||||||||||||||||||||| ||||| | ||||| ||||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 143 aacggagg 150
||||||||
Sbjct: 17 aacggagg 10
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| |||||||| |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
|||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 145 cggagga 151
|||||||
Sbjct: 15 cggagga 9
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||| |||||||||||||| |||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 64 acgaat 69
| ||||
Sbjct: 65 atgaat 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 99 catcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||| ||||| ||||| || ||||||||||||| |||||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagg 131
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 120/142 (84%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||| |||||||| |||| ||| |||| |||| || |||| |||||
Sbjct: 151 tccgtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaatc 92
Query: 71 taaatagatatatgt--ctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||||| | |||||||||||||||||||||| || |||||| ||||||
Sbjct: 91 tagacatatatatctatctagattcattaacatcaatatttctagtgaaaatactagaat 32
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagg 10
Score = 101 bits (51), Expect = 3e-21
Identities = 120/142 (84%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| ||||||||||||| |||||| || |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgttaatgaatc 71
Query: 71 taaatagatat--atgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| |||||||| ||||||||||||||||| |||||||| ||| | | |||| ||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatactagaat 131
Query: 129 gacttacattgtgaaacggagg 150
| ||||||||||||||||||||
Sbjct: 132 gtcttacattgtgaaacggagg 153
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 126/150 (84%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||| ||| ||||||||||||||| | || |||| ||| || ||
Sbjct: 159 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 100
Query: 63 aacgaatctaaatagatat--atgtctagattcattaacatcaatataaatatagaaaat 120
|| ||||||| ||| || | ||||||||||||||||||||| |||| ||||||| |||
Sbjct: 99 aatgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaat 40
Query: 121 gatagaatgacttacattgtgaaacggagg 150
| |||||||||||||||| |||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagg 10
Score = 83.8 bits (42), Expect = 7e-16
Identities = 126/153 (82%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatc 60
||||||| | ||||||||| ||| ||||||||||||||||| | |||||| ||| ||
Sbjct: 2 aactactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatg 61
Query: 61 ttaacgaatct--aaatagatatatgtctagattcattaacatcaatataaatatagaaa 118
|||| |||||| | ||||| |||| |||||||||||||||||| |||| ||| | |
Sbjct: 62 ttaatgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagca 121
Query: 119 atgatagaatgacttacattgtgaaacggagga 151
|| |||||||||||||||| ||||||||||||
Sbjct: 122 ttgctagaatgacttacattatgaaacggagga 154
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggag 149
|||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 150 ga 151
||
Sbjct: 10 ga 9
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| || |
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 62
Query: 62 taacgaat 69
||| ||||
Sbjct: 63 taatgaat 70
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 98 acatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggag 149
|||||||||| ||||| ||||||| |||||||||||||||| ||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||| ||| ||||||||||||||||||||||||||| ||||
Sbjct: 122 tccgtttcataatgtaagtcattctagcattttccatattcatatt 77
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| ||| | ||||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagg 150
||||||
Sbjct: 15 cggagg 10
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatc 60
||||||| | ||||||||||||| |||||||||||||||||||||| |||| |||| ||
Sbjct: 2 aactactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
Query: 61 ttaacgaatcta 72
|||| |||||||
Sbjct: 62 ttaatgaatcta 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| ||||||||||| |||| ||||||||||||
Sbjct: 96 aaatgttagaatgacttccattatgaaacggagga 130
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| ||||| | ||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagg 150
||||||
Sbjct: 15 cggagg 10
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| ||||| | ||||| |||||||||||||||| |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 145 cggagga 151
|||||||
Sbjct: 130 cggagga 136
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 79 tatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacatt 138
||||||||||||||||||| ||||||||||||||| ||||| || |||||||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 139 gtgaaacggagga 151
|||||||||||||
Sbjct: 21 gtgaaacggagga 9
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 99 catcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||| ||| | ||||||| || ||||||||| |||||||||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagg 134
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattt 42
|||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||||| ||||||||| ||| |||| | |||||||||| |||| |||| ||| ||| |
Sbjct: 158 actacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgt 99
Query: 62 taacgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatg 121
||| ||||||| | | |||| |||||||||||||||||||||| ||||||| ||||
Sbjct: 98 taatgaatctagacacgcatatacctagattcattaacatcaatatgaatataggcaatg 39
Query: 122 atagaatgacttacattgtgaaacggagg 150
||||| | |||||||| |||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagg 10
Score = 65.9 bits (33), Expect = 2e-10
Identities = 114/141 (80%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||| | |||||||||| | |||||| |||| || |||| |||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcctatattcatattgatgttaatgaatc 71
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| || || ||||||||||||||||||| |||| ||| | || |||| ||||| |
Sbjct: 72 taggtatatgcgtgtctagattcattaacatttatatgaatgtggacaatgctagaaagt 131
Query: 131 cttacattgtgaaacggagga 151
|||||||| ||||||||||||
Sbjct: 132 cttacattatgaaacggagga 152
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacat 23
Query: 138 tgtgaaacggagg 150
| |||||||||||
Sbjct: 22 tatgaaacggagg 10
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||||||||||||||||| ||||||| |||| || |||| |||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||||||||||||||| ||||||||||
Sbjct: 107 aaatgctagaatgacttacattgtaaaacggagga 141
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacatt 138
||||||||||||||||||||||||||||| ||| | ||||||| |||||||||||| |||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 139 gtgaaacggagga 151
||||||||||||
Sbjct: 123 atgaaacggagga 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||| |||||||||||||||| ||||||||| |||| |||| || ||
Sbjct: 140 ctacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtt 81
Query: 63 aacgaatcta 72
|| |||||||
Sbjct: 80 aatgaatcta 71
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 96 taacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||| |||||| | |||||| |||||||||||||||| |||||||||||
Sbjct: 64 taacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagg 10
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcatttt 43
||||||||| ||| |||||||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatttt 44
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 121/147 (82%), Gaps = 10/147 (6%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| |||||| ||||||||||||||||||||||||| | |||||| |||| || |||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| ||||||| || |||||||||||||||||||||| ||| | | ||||| |
Sbjct: 86 atgaatctagat----------ctagattcattaacatcaatatgaatgtgggaaatggt 37
Query: 124 agaatgacttacattgtgaaacggagg 150
| ||||||||||||| |||||||||||
Sbjct: 36 aaaatgacttacattatgaaacggagg 10
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| ||||||| ||||| |||||||||||| |||||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 135
Query: 145 cggagga 151
|||||||
Sbjct: 136 cggagga 142
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 121/147 (82%), Gaps = 10/147 (6%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| |||||| |||||| |||||||||||||||||| ||| |||| |||| || |||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| | ||||| || |||||| ||||||||||||||| ||| | ||||||| |
Sbjct: 86 atgtatctatat----------ctagatacattaacatcaatatgaatgtggaaaatgct 37
Query: 124 agaatgacttacattgtgaaacggagg 150
|||||||||||||||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagg 10
Score = 91.7 bits (46), Expect = 3e-18
Identities = 116/141 (82%), Gaps = 10/141 (7%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||||||| |||| |||| || |||| | |||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgtatc 71
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| ||| ||||| ||||||||||||||| ||| | | ||||| ||||||||
Sbjct: 72 tagata----------tagatacattaacatcaatatgaatgtgggaaatgctagaatga 121
Query: 131 cttacattgtgaaacggagga 151
||||||||||| |||||||||
Sbjct: 122 cttacattgtggaacggagga 142
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 95.6 bits (48), Expect = 2e-19
Identities = 118/141 (83%), Gaps = 4/141 (2%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||||||||||||| |||||||||||| ||| |||| || ||| |||||
Sbjct: 145 tccgtttcacaatataagtcattttagcattttccacatttatattgatgctaatgaatc 86
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|||| |||| |||| |||||||| ||||||| ||||| | ||||| || |||||
Sbjct: 85 ----tagagatatatctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatga 30
Query: 131 cttacattgtgaaacggagga 151
|||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagga 9
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 75 tagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgactta 134
||||||||| ||||||||||||| ||||||||||||| | ||||||| || |||||||||
Sbjct: 72 tagatatatctctagattcattagcatcaatataaatgtggaaaatgctaaaatgactta 131
Query: 135 cattgtgaaacggagg 150
|||||||||||||||
Sbjct: 132 tattgtgaaacggagg 147
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 121/147 (82%), Gaps = 10/147 (6%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| |||||| ||||||||||||||||||||||||| | |||||| |||| || |||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| ||||||| || |||||||||||||||||||||| ||| | | ||||| |
Sbjct: 65 atgaatctagat----------ctagattcattaacatcaatatgaatgtgggaaatggt 114
Query: 124 agaatgacttacattgtgaaacggagg 150
| ||||||||||||| |||||||||||
Sbjct: 115 aaaatgacttacattatgaaacggagg 141
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| ||||||| ||||| |||||||||||| |||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 16
Query: 145 cggagga 151
|||||||
Sbjct: 15 cggagga 9
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattg 139
|||||| ||||||||||||||||||||| ||| | ||||||| |||||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 140 tgaaacggagg 150
|||||||||||
Sbjct: 125 tgaaacggagg 135
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
|||||||||||||||||||||||||||||||||||| |||| |||| || |||| |||||
Sbjct: 133 tccgtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaatc 74
Query: 71 ta 72
||
Sbjct: 73 ta 72
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 125/150 (83%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||| ||| ||||||||||||||||| ||| || | ||| || ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtt 63
Query: 63 aacgaatctaaata--gatatatgtctagattcattaacatcaatataaatatagaaaat 120
|| |||| || ||| ||| | |||||||||||||||||||| |||| ||||| | |||
Sbjct: 64 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaat 123
Query: 121 gatagaatgacttacattgtgaaacggagg 150
| |||||||||||||||| |||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagg 153
Score = 71.9 bits (36), Expect = 2e-12
Identities = 117/143 (81%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| ||||||||||||||||| |||||||| ||| || |||| |||||
Sbjct: 151 tccgtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaatc 92
Query: 71 taaatagatat--atgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | | || || |||| ||||||||||||| |||| || | | |||| ||||||
Sbjct: 91 tagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatgctagaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||||||| ||||||||||||
Sbjct: 31 gacttacattatgaaacggagga 9
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 119/142 (83%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||||||||||||||||| | |||||| ||| | ||| |||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatttcctatattcatatagaggttagtgaatc 71
Query: 71 taaatagatat--atgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| |||||||| ||||||||||||| |||| || |||| ||| | | ||||| ||||||
Sbjct: 72 tatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatgctagaat 131
Query: 129 gacttacattgtgaaacggagg 150
|||||||||| |||||||||||
Sbjct: 132 gacttacattatgaaacggagg 153
Score = 77.8 bits (39), Expect = 4e-14
Identities = 117/142 (82%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||||||||||||||||| ||| |||| ||| | ||| |||||
Sbjct: 151 tccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaatc 92
Query: 71 taaatagatatatgtcta--gattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||||| | || |||||| |||| || |||| ||||||| ||||| ||||||
Sbjct: 91 tagacatatatatctatatagattcactaacctctatatgaatataggaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagg 150
|||||||||| |||||||||||
Sbjct: 31 gacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 125/150 (83%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||| ||| ||||||||||||||| | || |||| ||| || ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 63
Query: 63 aacgaatctaaatagatat--atgtctagattcattaacatcaatataaatatagaaaat 120
|| ||||||| ||| || | || |||||||||||||||||| |||| ||||||| |||
Sbjct: 64 aatgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaat 123
Query: 121 gatagaatgacttacattgtgaaacggagg 150
| |||||||||||||||| |||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagg 153
Score = 83.8 bits (42), Expect = 7e-16
Identities = 126/153 (82%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatc 60
||||||| | ||||||||| ||| ||||||||||||||||| | |||||| ||| ||
Sbjct: 161 aactactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatg 102
Query: 61 ttaacgaatct--aaatagatatatgtctagattcattaacatcaatataaatatagaaa 118
|||| |||||| | ||||| |||| |||||||||||||||||| |||| ||| | |
Sbjct: 101 ttaatgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagca 42
Query: 119 atgatagaatgacttacattgtgaaacggagga 151
|| |||||||||||||||| ||||||||||||
Sbjct: 41 ttgctagaatgacttacattatgaaacggagga 9
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 93.7 bits (47), Expect = 7e-19
Identities = 95/110 (86%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 26 aagtcattctagcattttccatattcgtattaatcttaacgaatctaaatagatat--at 83
||||||||||||||||| || |||| |||| || |||| ||||||| |||||||| ||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 84 gtctagattcattaacatcaatataaatatagaaaatgatagaatgactt 133
|||||||||||||||||||||||| ||| | | ||||| |||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 69.9 bits (35), Expect = 1e-11
Identities = 92/110 (83%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 26 aagtcattctagcattttccatattcgtattaatcttaacgaatctaaatagatatatgt 85
||||||||||||||||| ||| |||| |||| || |||| ||||||| | | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 86 --ctagattcattaacatcaatataaatatagaaaatgatagaatgactt 133
|||||||||||||||||||||| ||| | ||||| |||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||| ||||| ||||| ||||||| ||||| ||||||||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 145 cggagga 151
|||||||
Sbjct: 124 cggagga 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||| |||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 64 acgaatcta 72
| |||||||
Sbjct: 74 atgaatcta 66
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 115 gaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||||||||||||||||||| |||||||||||
Sbjct: 45 gaaaatgatagaatgacttacattatgaaacggagg 10
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattc 51
||||||||| ||| |||||||||||| ||||||||| ||||
Sbjct: 12 tccgtttcataatgtaagtcattctatcattttccacattc 52
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| ||| ||| ||||| |||||||||||||||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 145 cggagg 150
||||||
Sbjct: 113 cggagg 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatatt 50
|||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatatt 51
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 109 aatatagaaaatgatagaatgacttacattgtgaaacggagga 151
||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 51 aatatggaaaatgctagaatgacttacattgtgaaacggagga 9
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||| | ||||||||| ||| |||||||||||||||||| | | |||| |||| || |
Sbjct: 125 actactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgt 66
Query: 62 taacgaatcta 72
||| |||||||
Sbjct: 65 taatgaatcta 55
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
|||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 75 tctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 145 cggagg 150
||||||
Sbjct: 135 cggagg 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 99 catcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
||||||||| ||| | | ||||| || ||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagga 9
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| |||||| |||| || |||| ||||
Sbjct: 138 tccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgttaataaatc 79
Query: 71 taaatagat 79
|| ||||||
Sbjct: 78 tagatagat 70
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggag 149
|||||||||||||||||| ||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 150 ga 151
||
Sbjct: 109 ga 110
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattt 42
||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 115 ctacttcctccgtttcacaatgtaagtcattctagcattt 76
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| ||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagg 10
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattc 51
||||||||||||| |||||||||||||||||| ||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattc 52
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||||||||||||||||||| ||||||||| |||| ||||||| || ||||||||| ||
Sbjct: 55 atatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatat 114
Query: 138 tgtgaaacggagga 151
||||||||||||||
Sbjct: 115 tgtgaaacggagga 128
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 5 acttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatatt 80
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaac 145
||||| |||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaac 15
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 gtttcacaatataagtcattctagcattt 42
|||||||||| ||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 80 atatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattg 139
|||||| ||||||||||||||||||||| ||| | | ||||| |||||||||||||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 140 tgaaacggag 149
||||||||||
Sbjct: 20 tgaaacggag 11
Score = 91.7 bits (46), Expect = 3e-18
Identities = 115/139 (82%), Gaps = 13/139 (9%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||| ||||| ||| |||| |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc 71
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
||| | || ||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 72 taa------acatatctagattcattaacatcaatat-------gaaaatgctagaatga 118
Query: 131 cttacattgtgaaacggag 149
|||||||||||||||||||
Sbjct: 119 cttacattgtgaaacggag 137
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 145 cggagg 150
||||||
Sbjct: 15 cggagg 10
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
|||| |||||||| ||||||||| ||| ||||||||| |||||||| |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 145 cggagg 150
||||||
Sbjct: 136 cggagg 141
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
||||||||||||||||||||| || ||||| ||| | | ||||| |||||||||||||||
Sbjct: 58 atatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacat 117
Query: 138 tgtgaaacggagga 151
||||||||||||||
Sbjct: 118 tgtgaaacggagga 131
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| ||| |||| |||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 64 acgaatcta 72
| |||||||
Sbjct: 75 atgaatcta 67
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 15 tttcacaatataagtcattctagcattttccatattcgtatta 57
||||||||| |||||||||||||||||| ||| |||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatta 58
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| |||||||||||||||||||||| |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaatggagg 10
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| ||| | | ||||| ||||||||||||||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 145 cggagg 150
||||||
Sbjct: 126 cggagg 131
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 100 atcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagga 9
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||| ||||| ||| |||| |||| || |||| |||||
Sbjct: 129 tccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc 70
Query: 71 taaatagatat 81
|| ||||||||
Sbjct: 69 tagatagatat 59
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
||||||||||||||||||||| ||| | ||||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 147 gagga 151
|||||
Sbjct: 13 gagga 9
Score = 81.8 bits (41), Expect = 3e-15
Identities = 122/148 (82%), Gaps = 7/148 (4%)
Strand = Plus / Plus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||| ||| |||||||||||||||||||||| |||| |||| || ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 63 aacgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatga 122
|| ||||||| | || | ||| ||||||||||||||||| ||| | |||||
Sbjct: 64 aatgaatctatgt-gaca------tagtttcattaacatcaatatgaatgtgagaaatgc 116
Query: 123 tagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||| ||||
Sbjct: 117 tagaatgacttacattgtgaaaccgagg 144
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 83 tgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtga 142
|||||||||||||| |||||||||| ||| | | ||||| ||||||||||||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 143 aacggagga 151
|||||||||
Sbjct: 17 aacggagga 9
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| ||||||||||||| |||||||||||||||||| ||| |||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 97 aacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||||| ||| | | ||||| |||||||||||||||| |||||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagg 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||| ||| |||||||||||||||||| ||| |||| ||||
Sbjct: 128 tccgtttcataatgtaagtcattctagcatttcccacattcatatt 83
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 123/149 (82%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||||| ||||||||||||| ||||||||| |||||||| ||| |||| | | || |
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgt 62
Query: 62 taacgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatg 121
||| ||||| | | | ||||||| |||||||||||||||| |||| ||| | ||||||
Sbjct: 63 taatgaatcaagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatg 122
Query: 122 atagaatgacttacattgtgaaacggagg 150
|| |||||||| |||| |||||||||||
Sbjct: 123 ctaaaatgacttgcattatgaaacggagg 151
Score = 89.7 bits (45), Expect = 1e-17
Identities = 117/141 (82%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||||||| ||||||||| || |||| ||| || |||| |||||
Sbjct: 149 tccgtttcataatgcaagtcattttagcatttttcacattcatatagatgttaatgaatc 90
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| | |||||||||| |||||||||||||| | || ||| | | ||||| || |||||
Sbjct: 89 tatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgctaaaatga 30
Query: 131 cttacattgtgaaacggagga 151
|||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagga 9
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||||| ||||||||||||||||||||||| ||| | ||||||| |||| ||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 138 tgtgaaacggagg 150
||||||||||||
Sbjct: 113 ggtgaaacggagg 125
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
||||||||||||||||||| |||||||||| ||| | ||||| |||||||||||||||
Sbjct: 81 atatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaatgacttacat 140
Query: 138 tgtgaaacggagg 150
|||||||||||||
Sbjct: 141 tgtgaaacggagg 153
Score = 73.8 bits (37), Expect = 6e-13
Identities = 116/142 (81%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| || |||| |||| || | || |||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatc 92
Query: 71 taaatagatat--atgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||| ||||||||||||| | ||||||| ||| | | ||| ||||||
Sbjct: 91 tagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctagaat 32
Query: 129 gacttacattgtgaaacggagg 150
||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 89.7 bits (45), Expect = 1e-17
Identities = 117/141 (82%), Gaps = 5/141 (3%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
|||||||||||||||||||||||||| |||| ||| |||| |||| || |||| ||| |
Sbjct: 12 tccgtttcacaatataagtcattctattatttcccacattcatattgatgttaatgaaac 71
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| || || || || ||||||||||||||||||||| | | |||| ||||||||
Sbjct: 72 tacatctatttaagt-----ttcattaacatcaatataaatgtgggaaatactagaatga 126
Query: 131 cttacattgtgaaacggagga 151
|||||||||||||||||||||
Sbjct: 127 cttacattgtgaaacggagga 147
Score = 85.7 bits (43), Expect = 2e-16
Identities = 123/148 (83%), Gaps = 5/148 (3%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||||||| ||||||||||||| |||| ||| ||| |||| || ||
Sbjct: 152 ctacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtt 93
Query: 63 aacgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatga 122
|| ||| || || ||| |||| || ||||||||||||||||| ||| | | |||| |
Sbjct: 92 aatgaaacttaa---atagatgt--agtttcattaacatcaatatgaatgtgggaaataa 38
Query: 123 tagaatgacttacattgtgaaacggagg 150
|||||||||||| |||||||||||||||
Sbjct: 37 tagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 82 atgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtg 141
|||||||||||||||| ||||||||||||||| | ||||| || ||||||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 142 aaacggagg 150
||||||||
Sbjct: 18 gaacggagg 10
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 98 acatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||||| ||| | | ||||| ||||||| |||||||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggagga 128
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||| ||||||||||||| |||| ||||||||||||| ||| |||| ||||
Sbjct: 133 ctacttcctccgtttcacaatgtaagacattctagcatttcccacattcatatt 80
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 117/141 (82%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||||||||||||||||| ||| ||| |||| ||| || ||| |||||
Sbjct: 149 tccgtttcacaatataagtcattctaggattgcccacattcttatagatactaatgaatc 90
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
|| | ||||||||| ||||||||||||||| |||| ||| | | |||| ||||||||
Sbjct: 89 tagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgctagaatga 30
Query: 131 cttacattgtgaaacggagga 151
|||| ||| ||||||||||||
Sbjct: 29 cttatattatgaaacggagga 9
Score = 63.9 bits (32), Expect = 6e-10
Identities = 113/140 (80%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||||||||||||||||||||| ||| |||| ||| || |||| |||||
Sbjct: 12 tccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatc 71
Query: 71 taaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatga 130
| | | |||| || |||||||||||| ||| ||| ||| | | ||| ||||||||
Sbjct: 72 tggacatatatgtggctagattcattagtatctataagaatgtgggcaatcctagaatga 131
Query: 131 cttacattgtgaaacggagg 150
|||| |||||||||||||||
Sbjct: 132 cttatattgtgaaacggagg 151
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
||||||||||||||||||||||| | | ||||||| |||||| |||||||||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 147 gagg 150
||||
Sbjct: 13 gagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| ||||| |||||||||||||||| | | |||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagttattctagcattttccacaattatattgatgttaatgaatc 71
Query: 71 taaatagatata 82
|| |||||||||
Sbjct: 72 tatatagatata 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 127 atgacttacattgtgaaacggagg 150
||||||||||||||||||||||||
Sbjct: 98 atgacttacattgtgaaacggagg 121
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
|||||| |||||||||||||||| | | ||||||| ||||||||||||||||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 147 gagg 150
||||
Sbjct: 131 gagg 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttcca 46
|||||| | ||||||||||||| ||||||||||||||||||||||
Sbjct: 141 actactccctccgtttcacaatgtaagtcattctagcattttcca 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 116 aaaatgatagaatgacttacattgtgaaacggagg 150
|||||| || ||||||||||||||||||| |||||
Sbjct: 44 aaaatgctaaaatgacttacattgtgaaatggagg 10
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 134 aactacttcctccgtttcacaatgtaagtcattctagcattttccatattcatatt 79
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 97 aacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagga 127
Score = 73.8 bits (37), Expect = 6e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 82 atgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtg 141
|||| ||||||||| ||||||||||| ||| | ||||||| |||||| ||||||||||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 142 aaacggagg 150
|||||||||
Sbjct: 18 aaacggagg 10
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||||||| ||||| |||||||||||||||| |||| ||||
Sbjct: 12 tccgtttcacaatgtaagttattctagcattttccacattcatatt 57
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 89 gattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacgga 148
||||||||||||||||||| ||| | | ||||| ||||||||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 149 gga 151
|||
Sbjct: 11 gga 9
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| |||||||||||||||||| ||| |||| |||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 acgaatc 70
| |||||
Sbjct: 65 atgaatc 71
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 89 gattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacgga 148
||||||||||||||||||| ||| | ||||| |||||||| |||||||||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 149 gg 150
||
Sbjct: 135 gg 136
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 118/142 (83%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||||||||||| ||| | || || | |||| || ||| |||||
Sbjct: 151 tccgtttcataatgtaagtcattctactattgttcacatccatattgatgctaatgaatc 92
Query: 71 taaatag--atatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| |||| ||||||||||||||||||| |||| |||| ||| | ||||||| ||||||
Sbjct: 91 tagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagg 150
|||||||||| |||||||||||
Sbjct: 31 gacttacattatgaaacggagg 10
Score = 69.9 bits (35), Expect = 1e-11
Identities = 116/142 (81%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||||||||||||||||||||| |||| ||| || || |||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatc 71
Query: 71 t--aaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
| | ||| |||| | ||||||||||||| ||||||||| || | | ||| ||||||
Sbjct: 72 tagacatatatatctatctagattcattagcatcaatatggatgtgaacaatagtagaat 131
Query: 129 gacttacattgtgaaacggagg 150
|||||||||| |||||||||||
Sbjct: 132 gacttacattatgaaacggagg 153
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 118/142 (83%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| ||||||||||||| ||||| || || | ||| || ||| |||||
Sbjct: 151 tccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaatc 92
Query: 71 taaat--agatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| || | ||||||||||||||||||| |||| |||| ||| | ||||||| ||||||
Sbjct: 91 tagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagg 150
|||||||||| |||||||||||
Sbjct: 31 gacttacattatgaaacggagg 10
Score = 69.9 bits (35), Expect = 1e-11
Identities = 116/142 (81%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||||||||||||||||||||| |||| ||| || || |||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatc 71
Query: 71 t--aaatagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
| | ||| |||| | ||||||||||||| |||| |||| || | ||||| ||||||
Sbjct: 72 tagacatatatatttatctagattcattagcatcgatatggatgtgaaaaatactagaat 131
Query: 129 gacttacattgtgaaacggagg 150
|||||||||| |||||||||||
Sbjct: 132 gacttacattatgaaacggagg 153
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
|||||||||||||||||||||||| | | |||||| ||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 145 cggagga 151
|||||||
Sbjct: 120 cggagga 126
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatttt 43
|||||| ||||||||||||| |||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttt 91
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggagg 150
|||||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgttaaacggagg 10
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattg 139
|||||| ||||||||||||||||||||| ||| | | ||||| |||||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 140 tgaaacggagg 150
|||||||||||
Sbjct: 125 tgaaacggagg 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
|||||||||||||||||||||||||||||||| ||| |||| |||| || |||| |||||
Sbjct: 133 tccgtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatc 74
Query: 71 ta 72
||
Sbjct: 73 ta 72
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 94 attaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||| ||||| ||| | | ||||| |||||||||||||||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 9
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| ||| | |||||||||||||| |||||||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 145 cggagga 151
|||||||
Sbjct: 120 cggagga 126
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattc 51
|||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccacattc 52
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| |||||||||||| |||||||||||||||
Sbjct: 43 aaatgctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
|||| |||||||| ||||||||||||| ||||||||| || ||||| |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaa 135
Query: 145 cggagg 150
||||||
Sbjct: 136 cggagg 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||| ||||||||| ||| | |||||| |||||| |||||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 145 cggagg 150
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
|||| ||| ||||| |||||||||||| | ||||||| ||||||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagg 150
||||||
Sbjct: 15 cggagg 10
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| |||||||||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 84
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttcca 46
||||||||||||| ||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttcca 47
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 100 atcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||| ||| | | ||||| |||||||||||| ||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagga 132
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||| |||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 4 ctactacatccgtttcacaatataagtcattctagcatttcccatattcatatt 57
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatta 57
|||||| |||||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatta 66
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 99 catcaatataaatatagaaaatgatagaatgacttacattgtgaaacgga 148
||||||||| ||||| | ||||| |||||||||||| |||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||||||||| ||||||||||||||||
Sbjct: 81 aaatgctagaatgacttatattgtgaaacggagga 115
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
||||||||||||||||||||||||| |||| ||| |||| |||| ||||| | |||||||
Sbjct: 82 atatatgtctagattcattaacatctatatgaatgtagacaatgctagaaagtcttacat 23
Query: 138 tgtgaaacggagga 151
| ||||||||||||
Sbjct: 22 tatgaaacggagga 9
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| ||| | | ||||| |||||||||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 145 cggagg 150
||||||
Sbjct: 125 cggagg 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| |||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatatt 57
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 96 taacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||||||| ||| | ||||||| |||||||||||| ||||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggagga 9
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
|||||||||||||||||||||||||| ||||| ||| |||| |||| || |||| |||||
Sbjct: 128 tccgtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaatc 69
Query: 71 ta 72
||
Sbjct: 68 ta 67
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggag 149
||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 150 ga 151
||
Sbjct: 126 ga 127
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatttt 43
|||||| ||||||||||||| |||||||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttt 92
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 113 tagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||| || |||||||||||||||||||||||||
Sbjct: 47 tagaaaatgctaaaatgacttacattgtgaaacggagg 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttc 44
||||||||||||| ||||||||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcattttc 45
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 82 atgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtg 141
||||||||||| |||||||||||||| ||||| | ||||| || |||||||| |||||||
Sbjct: 63 atgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtg 122
Query: 142 aaacggagga 151
||||||||||
Sbjct: 123 aaacggagga 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| ||||||||||||| |||||||| |||||||| |||||||| ||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatatt 84
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggagga 151
|||||| ||||||||||||||||||||||
Sbjct: 37 tagaataacttacattgtgaaacggagga 9
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattc 51
|||||| ||||||||||||| ||||| ||||||| |||| ||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacattc 52
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 125/152 (82%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatc 60
||||||||| ||||||||||||| |||| | |||||||||| ||| || | ||| |||
Sbjct: 2 aactacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatg 61
Query: 61 ttaacgaatctaaatagat--atatgtctagattcattaacatcaatataaatatagaaa 118
|||| ||||||||| | || |||||||||||||||||| |||| | || ||| | | |
Sbjct: 62 ttaatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggca 121
Query: 119 atgatagaatgacttacattgtgaaacggagg 150
||| ||||| | ||||||||||||||||||||
Sbjct: 122 atgctagaaagtcttacattgtgaaacggagg 153
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 118 aatgatagaatgacttacattgtgaaacggagga 151
|||| ||||| | |||||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggagga 9
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 81 tatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgt 140
|||||||||||||||||||||| |||||||||| || |||| ||||| | |||||||| |
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattat 122
Query: 141 gaaacggag 149
|||||||||
Sbjct: 123 gaaacggag 131
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 125/152 (82%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatc 60
||||||||| ||||||||| ||| |||||||||||||| || |||||| | ||| ||
Sbjct: 2 aactacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatg 61
Query: 61 ttaacgaatctaaata--gatatatgtctagattcattaacatcaatataaatatagaaa 118
|||| ||||||| ||| || |||||| ||||||||||| |||| |||| ||| | | |
Sbjct: 62 ttaatgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggca 121
Query: 119 atgatagaatgacttacattgtgaaacggagg 150
||| || ||||||||||||| |||||||||||
Sbjct: 122 atgctaaaatgacttacattatgaaacggagg 153
Score = 63.9 bits (32), Expect = 6e-10
Identities = 116/143 (81%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| ||||||||| ||||||| ||| |||| ||| || ||| |||||
Sbjct: 151 tccgtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaatc 92
Query: 71 taaatagatat--atgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|||| | || | || |||||||||||||||||| |||| |||| | || | ||||||
Sbjct: 91 taaacatatgtctatatctagattcattaacatctatatgcatatgggtaaggctagaat 32
Query: 129 gacttacattgtgaaacggagga 151
|||||||||| ||||||||||||
Sbjct: 31 gacttacattatgaaacggagga 9
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 86 ctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaac 145
|||||||||||| ||||||||| || | ||||||||||||||||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 146 ggagg 150
|||||
Sbjct: 122 ggagg 126
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
|||||||||||||||||| |||||||||||||||
Sbjct: 43 aaatgatagaatgacttatattgtgaaacggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
|||||||||||||||||||||||||| |||||
Sbjct: 12 tccgtttcacaatataagtcattctatcattt 43
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcatttt 43
||||||||||||| |||||||||||| ||||||
Sbjct: 124 tccgtttcacaatgtaagtcattctatcatttt 92
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 83 tgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtga 142
|||||||||| || ||||||||||| ||| | | ||||| ||||||||||||||||||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 143 aacggagga 151
|||||||||
Sbjct: 132 aacggagga 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||| ||||||||||||| |||||||||||||||||| ||| |||| ||||
Sbjct: 145 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 92
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggag 149
|||||| ||||||||||| ||| | | ||||| ||||||| |||||||||||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 150 g 150
|
Sbjct: 10 g 10
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacatt 138
|||||||||||||||||| |||| ||||| ||| | ||||| ||||||||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 139 gtgaaacggagg 150
||||||||||||
Sbjct: 122 gtgaaacggagg 133
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| ||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||||||||||||
Sbjct: 131 tccgtttcacaatgtaagtcattctagcattt 100
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 88 agattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacgg 147
|||||||||| ||||||||| ||| | | ||||| |||||||||||||||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 148 agga 151
||||
Sbjct: 12 agga 9
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| ||||||||||||| |||||||||||||||||| ||| |||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 94 attaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||||||||| ||| | | ||||| ||||||||||||| ||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagg 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||||||||| |||||||||||||||||| ||| |||| ||||
Sbjct: 130 tccgtttcacaaagtaagtcattctagcatttcccacattcatatt 85
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttcca 46
||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattctagcattttcca 47
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
|||||||||||| |||||||| ||||| ||||| |||||||||||||||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 147 gagg 150
||||
Sbjct: 118 gagg 121
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||||||||||||||||| ||||||| |||| || |||| |||||
Sbjct: 119 tccgtttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaatc 60
Query: 71 taaata 76
||||||
Sbjct: 59 taaata 54
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 103 aatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
||||||||| | ||||||| |||||||||||| ||||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggagga 9
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
|||||||||||||||| |||| ||| | | ||||| ||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 147 gagg 150
||||
Sbjct: 13 gagg 10
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||||||||||||||||| ||| |||| ||| || |||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| ||||||||||||||||||||||||||||
Sbjct: 86 aaatgctagaatgacttacattgtgaaacggagg 119
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattc 51
||||||||||||| |||||||||||||||||| ||| ||||
Sbjct: 117 tccgtttcacaatgtaagtcattctagcatttcccacattc 77
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 118/143 (82%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||| | |||||||||| ||||||| | ||| || |||| |||||
Sbjct: 151 tccgtttcacaatgtaagactttctagcattgtccatatacatatagatgttaatgaatc 92
Query: 71 taaatagat--atatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|||||| || | ||||||||||||||||||| | | || ||| | | |||| |||||
Sbjct: 91 taaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatgctagaaa 32
Query: 129 gacttacattgtgaaacggagga 151
| |||||||||||||||||||||
Sbjct: 31 gtcttacattgtgaaacggagga 9
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
|||||||||||||||| |||| |||| || |||| ||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacg 149
Query: 147 gagg 150
||||
Sbjct: 150 gagg 153
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| |||||||||||||||||||||||||||||| | ||| |||| |||| || ||
Sbjct: 133 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 74
Query: 63 aacgaatctaaa 74
|| |||||||||
Sbjct: 73 aatgaatctaaa 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 97 aacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagg 10
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 82 atgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtg 141
|||| ||||||||||||||||||||| ||| | | | ||| |||||||||||| ||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 142 aaacggagga 151
||||||||||
Sbjct: 119 aaacggagga 128
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||||||| |||||||||||||||||||||| |||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacattcatatt 57
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattg 139
|||| |||||||||||||| |||||||| ||| | | ||||| ||||||||||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 140 tgaaacggagga 151
||||||||||||
Sbjct: 100 tgaaacggagga 111
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||| ||| |||||||||||||||||| ||| |||| |||| || |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 64 acgaatcta 72
| |||||||
Sbjct: 55 atgaatcta 47
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagg 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcat 40
||||||||||||| ||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
||||||||||||||||||||| ||| | | ||||| |||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 147 gagg 150
||||
Sbjct: 122 gagg 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| || |||||||||||||||||||| |||||||||||| |||| ||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatatt 53
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 14 gtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatcta 72
|||||||||| |||||||||||||||||| ||| |||| |||| || |||| |||||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 62
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 94 attaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||||||||| ||| | ||||||| || ||||||||| |||||||||| |||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagagga 5
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||| ||||||||||||||||||| ||| ||||||| |||||| || ||||||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 138 tgtgaaacgga 148
|||||||||||
Sbjct: 22 tgtgaaacgga 12
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||||||||||||| ||||||||| |||||| |||||| |||
Sbjct: 5 tacttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatgtta 64
Query: 64 acgaatctaaatagatat 81
| ||||||| | ||||||
Sbjct: 65 atgaatctagacagatat 82
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcatttt 43
||||||||||||||||||||||| || ||||||
Sbjct: 123 tccgtttcacaatataagtcattttaacatttt 91
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 116 aaaatgatagaatgacttacattgtgaaacggagg 150
|||||| || ||||||||| |||||||||||||||
Sbjct: 91 aaaatgttaaaatgacttatattgtgaaacggagg 125
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 120/147 (81%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||| ||| |||||| |||||||||| ||| |||| ||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 64 acgaatctaaatagatatatgtctagattcattaacatcaatataaatatagaaaatgat 123
| ||||||| | | | ||||||||||||||||||||||| | || |||||| |||| |
Sbjct: 65 atgaatctagacacacatatgtctagattcattaacatctagatgaatataagcaatgct 124
Query: 124 agaatgacttacattgtgaaacggagg 150
| || | |||||||| |||||||||||
Sbjct: 125 acaaagtcttacattatgaaacggagg 151
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 83 tgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtga 142
|||||||||||||||||||| |||| ||| | | |||| ||||| |||||||||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 143 aacggagga 151
|||||||||
Sbjct: 17 aacggagga 9
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 84 gtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaa 143
|||||||||||||| ||||||||| ||||| | |||| |||||||||||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 144 acggagg 150
|||||||
Sbjct: 125 acggagg 131
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||||| ||||||||||||| ||||| ||||||| |||| ||||||| ||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatatt 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||| ||| ||||||||||||| |||| |||||||| ||||
Sbjct: 129 tccgtttcataatgtaagtcattctagtatttcccatattcatatt 84
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggagga 151
|||||| ||||||||||||||||||||||
Sbjct: 37 tagaattacttacattgtgaaacggagga 9
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 92 tcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||||||||||| ||| | ||||||| || |||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagg 10
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||||||| ||||||||| |||||||||||| |||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcattttccacattcatatt 57
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 96 taacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||||||| ||| | ||||||| || ||| | |||||||||||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagg 123
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||||||| ||| | ||| |||||||||||| |||| ||||
Sbjct: 121 tccgtttcacaatgtaatttattttagcattttccacattcatatt 76
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||| ||||||||||||||| |||| |||||||||||| |||||||||
Sbjct: 75 tctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaa 16
Query: 145 cggagga 151
|||||||
Sbjct: 15 cggagga 9
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||||||||||||||||| |||| |||||| |||| || ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 64 acgaatctaaatagatatat 83
| ||||||| ||||||||||
Sbjct: 65 atgaatctagatagatatat 84
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| || ||||||||||||| |||||||||||
Sbjct: 90 aaatgctacaatgacttacattatgaaacggagg 123
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 89 gattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacgga 148
||||||||||||||||||| ||| | | ||||| || |||||||||||||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 149 gga 151
|||
Sbjct: 128 gga 130
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctt 62
||||||| ||||||||||||| ||||||||| |||||||| ||| |||| |||| || ||
Sbjct: 135 ctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtt 76
Query: 63 aacgaatc 70
|| |||||
Sbjct: 75 aatgaatc 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||| ||||||||||||||| ||||||||| | |||||||||| |||| ||||
Sbjct: 5 tactccatccgtttcacaatgtaagtcattttggcattttccacattcatatt 57
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 98 acatcaatataaatatagaaaatgatagaatgacttacattgtgaaacgga 148
|||||||||| ||| | ||||||| | |||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||||| |||||||||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 116 actacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 62
Score = 63.9 bits (32), Expect = 6e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcattt 43
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||||||||| ||||||||||||||||
Sbjct: 76 aaatgctagaatgacttatattgtgaaacggagga 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| |||||||||||| |||||||||||||||
Sbjct: 43 aaatgctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 93 cattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||| |||||||||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagga 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
|||||||||||||| |||||||| ||| | ||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagg 150
||||||
Sbjct: 15 cggagg 10
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| ||||||||||||| |||||||||||||||||| |||||||| ||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatatt 90
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| ||| | ||||| |||||||||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 145 cggagga 151
|||||||
Sbjct: 117 cggagga 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| |||||||||||||||||||||||||||||||| || |||| |||| || |||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 64 acgaatctaaatag 77
| ||||||| ||||
Sbjct: 67 atgaatctagatag 54
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattt 42
|||||| ||||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagga 9
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 86 ctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaac 145
|||||||||||| ||||||||| ||| | | ||||| || ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 146 ggagga 151
||||||
Sbjct: 14 ggagga 9
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| ||||||||||||| ||||||||| |||||||| ||| |||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 127 atgacttacattgtgaaacggagg 150
||||||||||||||||||||||||
Sbjct: 115 atgacttacattgtgaaacggagg 138
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
|||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||||
Sbjct: 125 tccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatc 66
Query: 71 ta 72
||
Sbjct: 65 ta 64
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||| ||| ||||| ||| | | ||||| |||||||||||| |||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 145 cggagg 150
||||||
Sbjct: 122 cggagg 127
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| ||||||||||||| |||||||||||||||||| ||| |||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 100 atcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||| ||| | | ||||| |||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 9
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggag 149
||||||||| |||||||| ||| | | ||||| |||||||||||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 150 ga 151
||
Sbjct: 121 ga 122
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattt 42
||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 129 aactacttcctccgtttcacaatgtaagtcattctagcattt 88
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| ||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
||||||||||||||||||||||||| | || ||| | || |||| ||||| | |||||||
Sbjct: 82 atatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacat 23
Query: 138 tgtgaaacggagga 151
||||||||||||||
Sbjct: 22 tgtgaaacggagga 9
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattc 51
|||||| ||||||||||||| |||| | |||||||||| |||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattc 52
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 89 gattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacgga 148
||||||||| ||||||||| ||| | | ||||| ||||||||||||||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 149 gg 150
||
Sbjct: 11 gg 10
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 89 gattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacgga 148
||||||||| ||||||||| ||| | | ||||| |||||||||||||||| |||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 149 gg 150
||
Sbjct: 132 gg 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| | ||||||||||||| |||||||||||||||||| ||| |||| ||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||| ||| |||||||||||||||||| ||| |||| ||||
Sbjct: 131 tccgtttcataatgtaagtcattctagcatttcccacattcatatt 86
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 122/149 (81%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||| ||| ||||||||||||||||| ||| || ||| || |||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 64 acgaatctaaata--gatatatgtctagattcattaacatcaatataaatatagaaaatg 121
| |||| || ||| ||| | |||||||||||||||||||| |||| ||| | | ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 122 atagaatgacttacattgtgaaacggagg 150
|||||||||||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 116/143 (81%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| ||||||||||||||||| | | |||| ||| || |||| |||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaatc 71
Query: 71 taaatagatat--atgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | | || || |||| ||||||||||||| ||||| || | | |||| ||||||
Sbjct: 72 tagacacacatctatatctaaattcattaacatctatatatatgtgggcaatgctagaat 131
Query: 129 gacttacattgtgaaacggagga 151
|||||||||| ||||||||||||
Sbjct: 132 gacttacattatgaaacggagga 154
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggag 149
|||||||||||||||||| || | ||||||| |||||||||||||||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgt-gaaaatgctagaatgacttacattgtgaaacggag 11
Query: 150 ga 151
||
Sbjct: 10 ga 9
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttc 44
|||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttc 45
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 115 gaaaatgatagaatgacttacattgtgaaacggagg 150
||||||| ||||||||||||||||||||||||||||
Sbjct: 72 gaaaatgctagaatgacttacattgtgaaacggagg 107
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttc 44
||||||||||||| ||||||||||||||||||||
Sbjct: 105 tccgtttcacaatgtaagtcattctagcattttc 72
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 86 ctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaac 145
|||||||||||| ||||||||| ||| | | ||||| || ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 146 ggagga 151
||||||
Sbjct: 134 ggagga 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| ||||||||||||| ||||||||| |||||||| ||| |||| ||||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 91
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 127 atgacttacattgtgaaacggagg 150
||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||||||||||||||||||| | ||||| ||| | | ||||| |||||||||||||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 138 tgtgaaacggagga 151
||||||||||||||
Sbjct: 113 tgtgaaacggagga 126
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatta 57
|||||| ||||||||||||| |||||||||||||||||| ||| |||| |||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatta 77
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattt 42
|||||| ||||||||||||| ||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcattt 43
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||| ||||||||||||||||||||||
Sbjct: 43 aaatgctagaataacttacattgtgaaacggagga 9
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
|||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||| ||| ||||| ||| | | ||||| |||||||||||| |||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 145 cggagg 150
||||||
Sbjct: 15 cggagg 10
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| ||||||||||||| |||||||||||||||||| ||| |||| ||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 80
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 100 atcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||| ||| | | ||||| |||||||||||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 128
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
|||| ||| ||||| |||||||||||| | | ||||| ||||||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagg 150
||||||
Sbjct: 15 cggagg 10
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| |||||||||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 100 atcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||| ||| | | ||||| |||||||||||| ||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagga 132
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||| ||||||||||||||||||||||||| ||| | |||| |||||||||||||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 138 tgtgaaacggagga 151
| ||||||||||||
Sbjct: 22 tatgaaacggagga 9
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||| ||| ||||||||||||| |||| || |||| |||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 64 acgaatcta 72
| |||||||
Sbjct: 65 atgaatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| |||||||||||||||| ||||| |||||
Sbjct: 92 aaatgctagaatgacttacattatgaaatggagg 125
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 80/93 (86%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 61 ttaacgaatctaaatagata--tatgtctagattcattaacatcaatataaatatagaaa 118
|||| ||||||||||| ||| |||||||||||||||||||||| | || ||||| | |
Sbjct: 101 ttaatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggca 42
Query: 119 atgatagaatgacttacattgtgaaacggagga 151
||| ||||| | |||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttacattgtgaaacggagga 9
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattc 51
|||||| ||||||||||||| |||| | |||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattc 52
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| ||||||||||||| |||||||||||||||||| |||||||| ||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatatt 85
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 100 atcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagga 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgataga-atgacttacattgtgaa 143
||||||||||||||||||||||| ||| | | ||||| |||| |||||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 144 acggagg 150
|||||||
Sbjct: 16 acggagg 10
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 79 tatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacatt 138
|||||||||||||||||||||||| |||| ||| | | |||| ||||| ||||||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 139 gtgaaacggagga 151
||||||||||||
Sbjct: 21 atgaaacggagga 9
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 73.8 bits (37), Expect = 6e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcatt 41
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 107 aactacttcttccgtttcacaatataagtcattctagcatt 67
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| ||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 118 aatgatagaatgacttacattgtgaaacgga 148
|||| |||||||||||| |||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacgga 97
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
||||||||||||||||||||||||| |||| ||||| | ||| ||||| | |||||||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacat 140
Query: 138 tgtgaaacggagg 150
|||||||||||||
Sbjct: 141 tgtgaaacggagg 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 113/142 (79%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||| | |||||| ||| |||||||| ||| || |||| |||||
Sbjct: 151 tccgtttcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaatc 92
Query: 71 taaatagatata--tgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| | | |||| |||||| ||||||||||||| |||| ||||| | | | |||||
Sbjct: 91 tagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagtactagaaa 32
Query: 129 gacttacattgtgaaacggagg 150
| ||||||| ||||||||||||
Sbjct: 31 gtcttacatggtgaaacggagg 10
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattc 51
||||||| |||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 136 ctacttcctccgtttcacaatataagtcattctagcatttcccacattc 88
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattt 42
||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 2 aactactccctccgtttcacaatataagtcattctagcattt 43
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 88 agattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacgg 147
||||||||||| |||||| | ||| | | ||||| |||||||||||| ||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 148 agga 151
||||
Sbjct: 128 agga 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| |||||||||||| |||||||||||||||
Sbjct: 43 aaatgctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattc 51
||||||||||||| |||||||||||||||||||||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcattttccatattc 83
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 104 atataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||| ||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagg 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggag 149
||||||||||| |||||| ||| | ||||| |||||||||||||||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 150 ga 151
||
Sbjct: 10 ga 9
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattt 42
|||||| ||||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 91 ttcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||||||||||| ||| | | ||||| ||||||||||| ||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 151 a 151
|
Sbjct: 9 a 9
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||| ||||||||||||| ||||||||||||||||| ||| |||| ||||
Sbjct: 2 aactacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||||||||||||| ||| |||||||| |||| |||| || |||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 64 acgaatcta 72
| |||||||
Sbjct: 70 atgaatcta 62
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
||||||||||||||||||||| ||| | |||||| || ||||||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 147 gagga 151
|||||
Sbjct: 122 gagga 126
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtgaaacggagg 150
|||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagg 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||||||| ||||||||| | | |||||||| |||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcatttttgtattttccacattcatatt 57
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 95 ttaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||||||||||||| ||||| || |||||||||||||||||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagg 10
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 95 ttaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggagga 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattt 42
|||||| ||||||||||||||||||||||| ||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcattt 84
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 91 ttcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||||||| ||||||| | | ||||| |||||||||||| |||||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| ||||||||||||| ||||||||| |||||||| ||| |||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||||||||||||
Sbjct: 114 tccgtttcacaatctaagtcattctagcattt 83
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| || ||||||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagga 9
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 83 tgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtga 142
||||||||||||||||||||||||| ||| | |||| || |||||||||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 143 aacggagg 150
||||||||
Sbjct: 135 aacggagg 142
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 94 attaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||||||||||||| | |||| || |||||||||||||||||||| ||||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaacagagg 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| ||||||||| ||| |||| || |||| |||| || |||| |||||
Sbjct: 140 tccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaatc 81
Query: 71 ta 72
||
Sbjct: 80 ta 79
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 92 tcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
||||||||||| |||| ||| | | ||||| |||||||||||||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 95 ttaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||| |||| ||| | | ||||| ||||||||||||||||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattc 51
|||||| ||||||||||||| |||||||||||||||||| ||| ||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattc 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattc 51
||||||||||||| |||||||||||||||||| ||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattc 52
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 106 ataaatatagaaaatgatagaatgacttacattgtgaaacggag 149
|||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 40 ataaatatagaaaatgctagaatgacttatattgtgaaacggag 83
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatatt 50
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 82 tccgtttcacaatataagtcattctagcattttctatatt 43
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcat 40
|||||| ||||||||||| | ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacagtgtaagtcattctagcat 41
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggagga 151
|||||||||||||| ||||||||||||||
Sbjct: 37 tagaatgacttacactgtgaaacggagga 9
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacatt 138
|||||||||||||||| ||||||| ||| ||| | ||||||| ||||||||||||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Query: 139 gtgaaacggagg 150
| |||||||||
Sbjct: 122 ataaaacggagg 133
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| |||||||||||||||| |||||||||||
Sbjct: 43 aaatgttagaatgacttacattatgaaacggagg 10
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtat 55
||||||| | ||| |||||||||||| ||||||||| ||||||||
Sbjct: 131 tccgttttataatgtaagtcattctaacattttccacattcgtat 87
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 116/142 (81%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| |||||||| | |||||| ||| |||||||| ||| || |||| ||| |
Sbjct: 12 tccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaacc 71
Query: 71 taaatagata--tatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| ||| ||| |||||||||||||||||||||| |||| ||| | || ||| || ||
Sbjct: 72 tagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaaaa 131
Query: 129 gacttacattgtgaaacggagg 150
| ||||||||||||||||||||
Sbjct: 132 gtcttacattgtgaaacggagg 153
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattt 42
|||||| ||||||||||||||||||||||||||||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcattt 97
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 88 agattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacgg 147
|||||||||| ||||||||| ||| | ||||| |||||||||||| ||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 148 agga 151
||||
Sbjct: 128 agga 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 92 tcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||| ||||||||| ||| | ||||| ||||||||||||||| ||||||| ||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagagg 10
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||||||||||||| | | |||||| || |||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 145 cggagga 151
|||||||
Sbjct: 120 cggagga 126
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||||||| ||||||||| ||||||||| || | | |||| || |||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 64 acgaatctaaatagatata 82
| ||||||| |||||||||
Sbjct: 70 atgaatctagatagatata 52
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttcca 46
|||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttcca 66
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 115 gaaaatgatagaatgacttacattgtgaaacggagga 151
||||||| |||||||||||||||||||||||||||||
Sbjct: 68 gaaaatgctagaatgacttacattgtgaaacggagga 104
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| || |||||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 116/142 (81%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| |||||||| | |||||| ||| |||||||| ||| || |||| ||| |
Sbjct: 151 tccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaacc 92
Query: 71 taaatagata--tatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| ||| ||| |||||||||||||||||||||| |||| ||| | || ||| || ||
Sbjct: 91 tagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaaaa 32
Query: 129 gacttacattgtgaaacggagg 150
| ||||||||||||||||||||
Sbjct: 31 gtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 81 tatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgt 140
||||| || ||| |||||||||||||| ||| | |||||| || |||||||||||||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 141 gaaacggagga 151
|||||||||||
Sbjct: 19 gaaacggagga 9
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||| ||||||||||||| ||||||||| ||| |||||||| |||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 93 cattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggagga 9
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattt 42
||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcatt 41
|||||| |||||| |||||||||||||||||
Sbjct: 94 tccgttccacaatgtaagtcattctagcatt 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 118 aatgatagaatgacttacattgtgaaacgga 148
|||| ||||||||||||||||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacgga 94
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||| |||||||||||||| |||||| || ||||| |||||||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Query: 145 cggagg 150
|||||
Sbjct: 96 tggagg 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtgaaacggagga 151
||||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagga 9
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcatt 33
|||||| ||||||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 81 tatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgt 140
|||||||||||| ||||||||| |||| ||| | || |||| |||||| ||||||||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 141 gaaacggagg 150
||||||||||
Sbjct: 123 gaaacggagg 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcatt 41
|||||||| ||||||||| ||| ||||| |||||||||||
Sbjct: 3 actacttcctccgtttcataatgtaagttattctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 118 aatgatagaatgacttacattgtgaaacggagga 151
|||| |||||| ||||||||| ||||||||||||
Sbjct: 42 aatgctagaataacttacattatgaaacggagga 9
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
||||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||
Sbjct: 55 atatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacat 114
Query: 138 tgtgaaacggagga 151
| ||||| ||||||
Sbjct: 115 tatgaaatggagga 128
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 104 atataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||| ||||||| |||| |||||||||||||||| |||||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcatt 41
||||||||| ||| |||||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatt 41
|||||| ||| ||||| ||| |||||||||||||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcatt 95
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattc 51
|||||| | ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3 actactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttcca 46
||||||||||||| ||||||||||||||||||||||
Sbjct: 109 tccgtttcacaatgtaagtcattctagcattttcca 74
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 115 gaaaatgatagaatgacttacattgtgaaacggagg 150
||||||| ||||||||||||||||||||||||||||
Sbjct: 76 gaaaatgctagaatgacttacattgtgaaacggagg 111
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 109 aatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||| ||||||| ||||||||||| ||||||||||||||||
Sbjct: 51 aatatggaaaatgctagaatgacttgcattgtgaaacggagg 10
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||||||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccacattcatatt 57
Score = 63.9 bits (32), Expect = 6e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 2 actacttcatccgttt-cacaatataagtcattctagcattttccatattcgtatt 56
|||||||| ||||||| ||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 118 actacttcctccgttttcacaatataagtcattctagcatttcccacattcatatt 63
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 100 atcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||| ||| | | ||||| |||||||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 121/149 (81%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||| ||| |||||| |||||| ||| ||| |||| ||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 64 acgaatctaaatagatatatgt--ctagattcattaacatcaatataaatatagaaaatg 121
| ||||||| | | |||||||| ||||||||||||||||| |||| ||||| ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 122 atagaatgacttacattgtgaaacggagg 150
||||| | |||||||| |||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagg 153
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
||||||||||||||||||||||||| |||| ||| | | ||| ||||| |||||||||
Sbjct: 82 atatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagacttacat 23
Query: 138 tgtgaaacggagga 151
| ||||||||||||
Sbjct: 22 tatgaaacggagga 9
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 105 tataaatatagaaaatgatagaatgacttacattgtgaaacggag 149
||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 39 tataaatgtaggaaatgctagaatgacttacattgtgaaacggag 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggagga 151
|||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagga 9
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||||||||||||
Sbjct: 82 tccgtttcacaatgtaagtcattctagcattt 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctag 37
|||||| ||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 98 acatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||| |||||| |||||| |||||||| |||||||||||||||||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagg 99
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatatt 50
||||||||||||| ||| ||||||||||||||| ||||||
Sbjct: 97 tccgtttcacaatgtaaatcattctagcatttttcatatt 58
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 13 cgtttcacaatataagtcattctagcatttt 43
||||||||||||||||||||||||| |||||
Sbjct: 14 cgtttcacaatataagtcattctagtatttt 44
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattt 42
|||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 141 actacttcctccgtttcacaatataagtcattctaggattt 101
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattc 51
|||||| ||||||||||||| ||||||||||||| |||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattc 52
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggagga 151
|||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagga 9
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtgaaacggagga 151
|||||||||||| ||||||||||||||||
Sbjct: 107 tagaatgacttatattgtgaaacggagga 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattaaca 100
||||||||||||||||||||||
Sbjct: 63 tatatgtctagattcattaaca 84
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattc 51
||||||| ||||||||||||| ||||||||||||||| |||||| ||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggagga 151
|||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagga 9
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
||||||||||||||||||||||||| |||| ||| | | ||| ||||| | |||||||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacat 140
Query: 138 tgtgaaacggagg 150
|||||||||||||
Sbjct: 141 tgtgaaacggagg 153
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 83 tgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtga 142
|||||| ||||||||||||| |||| ||||| | | | ||||| | ||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacattgtga 18
Query: 143 aacggagg 150
||||||||
Sbjct: 17 aacggagg 10
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 74 atagatatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgactt 133
||||||||| ||||||||||||||| ||| |||| |||| | ||| |||||||||||
Sbjct: 86 atagatataagtctagattcattaatatctatatgcatatgggcaatattagaatgactt 27
Query: 134 acattgtgaaacggagg 150
||||| |||||||||||
Sbjct: 26 acattatgaaacggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 104 atataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||| ||| |||| |||| |||||||||||||||| ||||||||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacggagga 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatt 41
|||||| ||||||||| ||| |||||||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcatt 99
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcattttccatattc 51
||||||| ||||||||||||| |||||||||||||||||| ||| ||||
Sbjct: 96 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattc 48
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||||||||||||||||||||||||||
Sbjct: 57 aaatgctagaatgacttacattgtgaaacggagga 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| ||||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacagagg 10
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 gtttcacaatataagtcattctagcattt 42
|||||||||| ||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattt 42
|||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagga 9
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtgaaacggagg 150
|||| |||||||||||||||||||||||
Sbjct: 79 tagattgacttacattgtgaaacggagg 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcat 40
|||||| | ||||||||||||| ||||||| ||||||||
Sbjct: 113 actactccctccgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 92 tcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||||||||||| ||| | |||| || || ||||||||||||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||| ||||
Sbjct: 91 tagaatgacttacattgtgaaacagagg 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 14 gtttcacaatataagtcattctagcattttccatattcgtatt 56
|||||||||| ||||||||||||||| || ||| |||| ||||
Sbjct: 113 gtttcacaatgtaagtcattctagcacttcccacattcatatt 71
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattc 51
|||||| || |||||| |||||||||||||||||||||||||| ||||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattc 52
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||| ||||| ||| ||| | ||||||| |||||||||||| ||| |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 145 cggagga 151
| |||||
Sbjct: 15 cagagga 9
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 98 acatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||||| ||| | | ||||| || ||||||||||||| |||||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagg 133
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 83 tgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtga 142
|||||||||| ||||||||| |||| ||| | || |||| ||||| | ||||||||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 143 aacggagg 150
||||||||
Sbjct: 128 aacggagg 135
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattg 139
||||||||||||||||||||||| | || ||||| | |||| || || | |||||||||
Sbjct: 83 atatgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattg 142
Query: 140 tgaaacggagga 151
||||||||||||
Sbjct: 143 tgaaacggagga 154
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttcca 46
||||||||| ||||||||||||||||||||||||||
Sbjct: 12 tccgtttcataatataagtcattctagcattttcca 47
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 115 gaaaatgatagaatgacttacattgtgaaacggagg 150
||||||| |||||||||||| ||| |||||||||||
Sbjct: 45 gaaaatgctagaatgacttatattatgaaacggagg 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 cgtttcacaatataagtcattctagcattt 42
||||||| ||| ||||||||||||||||||
Sbjct: 137 cgtttcataatgtaagtcattctagcattt 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacg 146
||||| |||||||||||||||| |||||||
Sbjct: 108 aaatgctagaatgacttacattatgaaacg 137
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
|||||||| ||||||| |||| ||||| ||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 147 gagg 150
||||
Sbjct: 13 gagg 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 115/142 (80%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||||||||||||||||| |||||| ||| || ||| |||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatttctcatattgatatagatgttagtgaatc 71
Query: 71 taaatag--atatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
||| || ||||||||||||||||| ||||||| | | ||| | |||||| || |||
Sbjct: 72 taagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatgctacaat 131
Query: 129 gacttacattgtgaaacggagg 150
|||||||||| |||||| ||||
Sbjct: 132 gacttacattatgaaacagagg 153
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattg 139
||||||||||||| ||||||||| |||| ||| | | |||| ||||| | |||||||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 140 tgaaacggagga 151
||||||||||||
Sbjct: 119 tgaaacggagga 130
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcatt 41
||||||||| ||||||||||||| |||| | ||||||||||
Sbjct: 137 aactacttcctccgtttcacaatgtaagactttctagcatt 97
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
|||||||||||| |||||||| |||| ||||| |||||||||||| |||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 147 gagg 150
||||
Sbjct: 13 gagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcattt 43
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatttt 43
|||||| ||||||||||||||||||||||| |||||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttt 98
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 116 aaaatgatagaatgacttacattgtgaaacggagga 151
|||||| || ||||||||| ||||||||||||||||
Sbjct: 98 aaaatgctaaaatgacttatattgtgaaacggagga 133
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 99 catcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||||||||| ||||||| |||||||||||| ||| ||||| |||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgacttatattatgaaatggagg 134
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 15 tttcacaatataagtcattctagcattttccatatt 50
||||| ||||||||||||||||||||||||||||||
Sbjct: 128 tttcataatataagtcattctagcattttccatatt 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/69 (84%), Gaps = 8/69 (11%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatata--------gaaaatgatagaatgacttacattgtg 141
||||||||||||||||||||||||| |||||| |||||||||||||||| ||
Sbjct: 78 attcattaacatcaatataaatatattgatgtggaaaatactagaatgacttacattatg 19
Query: 142 aaacggagg 150
|||||||||
Sbjct: 18 aaacggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttcca 46
||||||||| ||| ||||||||||||| ||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagtattttcca 47
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 100 atcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||| ||| | ||||||| |||||| |||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagg 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 100 atcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||| ||| | ||||||| |||||| |||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagg 120
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||||||| ||||| |||||||||||||||| |||| ||||
Sbjct: 12 tccgtttcacaatgtaagttattctagcattttccacattcatatt 57
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||||||| ||||| |||||||||||||||| |||| ||||
Sbjct: 118 tccgtttcacaatgtaagttattctagcattttccacattcatatt 73
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattt 42
|||||| ||||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagga 9
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattt 42
|||||| ||||||||||| ||||||||||||| ||||||||
Sbjct: 93 actactccatccgtttcataatataagtcattttagcattt 53
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 100 atcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||| ||| | ||||||| |||||| |||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagg 10
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||||||| ||||| |||||||||||||||| |||| ||||
Sbjct: 12 tccgtttcacaatgtaagttattctagcattttccacattcatatt 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 100 atcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||| ||| | | ||||| |||||| |||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagg 120
Score = 54.0 bits (27), Expect = 6e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||||||| ||||| |||||||||||| ||| |||| ||||
Sbjct: 118 tccgtttcacaatgtaagttattctagcatttnccacattcatatt 73
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattt 42
|||||| ||||||| ||||||||||||||||||||||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcattt 55
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 92 tcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||||||||||| | ||||| |||||||||||| ||||| ||||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcatt 33
|||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattt 42
|||||| ||||||||||||| ||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcattt 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||||||||||||||||||||||||||
Sbjct: 88 aaatgctagaatgacttacattgtgaaacggagga 122
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattc 51
||||||||||||||||||| |||||||||||| ||| ||||
Sbjct: 12 tccgtttcacaatataagttattctagcatttcccacattc 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 96 taacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||||| | ||| | | ||||| |||||| ||||| |||||||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagg 10
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 104 atataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
|||||||| | | ||||| ||||||||||||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| ||||||||||||||||||||||||||||
Sbjct: 111 aaatgctagaatgacttacattgtgaaacggagg 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 104 atataaatatagaaaatgatagaatgacttacattgtgaaacgg 147
|||||||| | | ||||| |||||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||||||||||||
Sbjct: 142 tccgtttcacaatgtaagtcattctagcattt 111
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 ccgtttcacaatataagtcattctagcattt 42
|||||||||||| ||||||||||||||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcattt 68
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| ||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 118 aatgatagaatgacttacattgtgaaacggagg 150
|||| |||||||| |||||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagg 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcatt 41
||||||||||||| ||| |||||||||||||
Sbjct: 88 tccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 94 attaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
||||| |||||||||||| | ||||| ||||||||||| |||||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggagga 104
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 122 atagaatgacttacattgtgaaacggagg 150
|||||||||||||||||||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatttt 43
|||||| ||||||||||||| |||||||||||| |||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttt 69
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattcta 36
||||||||||||| ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| ||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagg 10
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattt 42
|||||| | ||||||||||||| ||||||||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 94 attaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagga 151
|||||||||| ||| ||| | |||||| |||||||||||||||| ||||||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggagga 9
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||||| |||||||| |||||||||| ||| ||| | | |||| |||||||||||||||
Sbjct: 67 atatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttacat 126
Query: 138 tgtgaaacggagg 150
| |||||| ||||
Sbjct: 127 tatgaaacagagg 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatttt 43
|||||| ||||||||| ||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttt 44
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||||| |||||||||||||||||| |||| ||| | | |||| ||||| | |||||||
Sbjct: 81 atatatttctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacat 140
Query: 138 tgtgaaacggagga 151
| ||||||||||||
Sbjct: 141 tatgaaacggagga 154
Score = 54.0 bits (27), Expect = 6e-07
Identities = 87/106 (82%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||| ||| |||| | |||||||||| ||| |||| ||| || |||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 64 acgaatcta--aatagatatatgtctagattcattaacatcaatat 107
| ||||||| |||| || | |||||||||||||||||||| ||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatat 53
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||||| |||||||||||||||||| |||| ||| | | |||| ||||| | |||||||
Sbjct: 82 atatatttctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacat 23
Query: 138 tgtgaaacggagga 151
| ||||||||||||
Sbjct: 22 tatgaaacggagga 9
Score = 54.0 bits (27), Expect = 6e-07
Identities = 87/106 (82%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatctta 63
|||||| ||||||||| ||| |||| | |||||||||| ||| |||| ||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 64 acgaatcta--aatagatatatgtctagattcattaacatcaatat 107
| ||||||| |||| || | |||||||||||||||||||| ||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatat 110
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgactta 134
|||||||||||||||||||| ||||||||| ||| | ||||| ||||||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 aatataagtcattctagcattt 42
||||||||||||||||||||||
Sbjct: 108 aatataagtcattctagcattt 87
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 82 atgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtg 141
||||||||||||||||||||| |||| ||| | || |||| ||||| | |||||||| ||
Sbjct: 59 atgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatg 118
Query: 142 aaacggagg 150
|||| ||||
Sbjct: 119 aaacagagg 127
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 82 atgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtg 141
|||||||||||||||| |||| |||| ||| | | |||| ||||| | |||||||||||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtg 144
Query: 142 aaacggagg 150
|||||||||
Sbjct: 145 aaacggagg 153
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 4e-08
Identities = 122/151 (80%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaatct 61
|||||||| ||||||||||||| |||| | || ||||||| |||| ||| | | || |
Sbjct: 158 actacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatat 99
Query: 62 taacgaatctaaatagatatatg--tctagattcattaacatcaatataaatatagaaaa 119
||| ||||||| ||| || |||| |||||||||||||||||| |||| || | || ||
Sbjct: 98 taatgaatctagatatatgtatgtttctagattcattaacatc--tatatatgtggacaa 41
Query: 120 tgatagaatgacttacattgtgaaacggagg 150
|| ||||| | |||||||| |||||||||||
Sbjct: 40 tggtagaaagtcttacattatgaaacggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattg 139
|||| |||||||||||||| ||| | |||||| | || |||| || || | |||||||||
Sbjct: 81 atatatctagattcattaatatctaaataaatgtggacaatgctaaaaagtcttacattg 140
Query: 140 tgaaacggagga 151
||||||||||||
Sbjct: 141 tgaaacggagga 152
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
||||||||||||||||||||||||| || | |||| |||| ||||| | |||||||
Sbjct: 81 atatatgtctagattcattaacatctatgggtacataggcaatgttagaaagtcttacat 140
Query: 138 tgtgaaacggagg 150
|||||||||||||
Sbjct: 141 tgtgaaacggagg 153
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 83 tgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtga 142
||||||||||| |||||||| |||| ||| | || |||| ||||| | |||||||| |||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 143 aacggagg 150
||||||||
Sbjct: 96 aacggagg 103
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||| | |||||||||| |||| |||| ||| || ||||||||||
Sbjct: 101 tccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaatc 42
Query: 71 ta 72
||
Sbjct: 41 ta 40
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 62 tagaatgacttacattgtgaaacggagg 89
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattt 42
|||||| |||||| |||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattt 43
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
||||| ||||||||||||||||||| |||||||||
Sbjct: 43 aaatgctagaatgacttacattgtggaacggagga 9
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagc 38
||||||||||||| ||||||||||||||
Sbjct: 87 tccgtttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 83 tgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtga 142
||||||||||| |||||||| |||| ||||| | |||| ||||| | |||||||| |||
Sbjct: 77 tgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatga 18
Query: 143 aacggagg 150
||||||||
Sbjct: 17 aacggagg 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||| ||| |||| | |||||||||| |||||||| ||| || ||||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggagg 150
||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||||||||||||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagtattt 43
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 99 catcaatataaatatagaaaatgatagaatgacttacattgtgaaacggagg 150
||||||||||||| | |||||| || ||||||||||||| |||||| ||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagg 138
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 88 agattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacgg 147
||||||||||||||| | |||||| | || ||| ||||| | |||||||||||||||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacgg 110
Query: 148 agg 150
|||
Sbjct: 111 agg 113
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtattaa 58
|||||| ||||||||||||| ||||||||| ||| |||| ||| |||| ||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatattaa 55
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 126 aatgacttacattgtgaaacggagga 151
||||||||||||||||||||||||||
Sbjct: 80 aatgacttacattgtgaaacggagga 105
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtgaaacggagg 150
|||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 3 ctacttcatccgtttcacaatataagtcattctagcatt 41
||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcatt 42
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 118 aatgatagaatgacttacattgtgaaacggagga 151
|||| |||||||||||||||| ||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagga 9
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 84 gtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaa 143
||||||||||||||||||| |||| || | | |||| |||||||| ||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 144 acggagg 150
|| ||||
Sbjct: 121 acagagg 127
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 26 aagtcattctagcattttccatattcgtattaatcttaacgaatctaaatagatatatgt 85
||||||||||||||||| ||| |||| |||| || |||| | ||||| ||||||||| |
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatata--t 66
Query: 86 ctagattcattaac 99
|||||| |||||||
Sbjct: 65 ctagatacattaac 52
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgactt 133
||||||| ||||||||||||||| ||| | | ||||| |||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgactt 133
||||||| ||||||||||||||| ||| | | ||||| |||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatt 41
|||||||||||||||||||| |||| | ||||||||||
Sbjct: 126 tacttcatccgtttcacaatgtaagactttctagcatt 89
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| |||||||||||||||| |||||||||||
Sbjct: 90 aaatgctagaatgacttacattatgaaacggagg 123
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2 actacttcatccgtttcacaatataagtcattctagcattt 42
|||||| | ||||||||| ||| ||||||||||||||||||
Sbjct: 130 actactccctccgtttcataatgtaagtcattctagcattt 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattt 42
|||||| | ||||||| |||||||||||||||| |||||
Sbjct: 5 tacttccttcgtttcataatataagtcattctaacattt 43
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 34 ctagcattttccatattcgtattaatcttaacgaatctaaatagatatatgtctagattc 93
||||||||| ||| ||| |||| || |||| ||||||| ||||||||| |||||||||
Sbjct: 1 ctagcatttcccacgttcatattgatattaatgaatctagatagatataa-tctagattc 59
Query: 94 attaacatcaatat 107
||||| ||||||||
Sbjct: 60 attaatatcaatat 73
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagg 150
||||| |||||||| |||||||||||||||||||
Sbjct: 43 aaatgctagaatgagttacattgtgaaacggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattt 42
||||||||||||| ||| ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaactcattctagcattt 43
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacat 137
|||||||||||||||||||| |||| |||| ||| | | |||||||||| | |||| |
Sbjct: 61 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 120
Query: 138 tgtgaaacggagg 150
| |||||||||||
Sbjct: 121 tatgaaacggagg 133
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtgaaacggagg 150
|||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagg 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtatt 56
||||||||||||| ||||||||| ||| ||||| || |||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattatagtatttttcacattcatatt 57
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1 aactacttcatccgtttcacaatataagtcattctagcatt 41
||||||||| |||||| ||||||||||| | ||||||||||
Sbjct: 141 aactacttcctccgttccacaatataagactttctagcatt 101
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 82 atgtctagattcattaacatcaatataaatatagaaaatgatag 125
||||||||||||||| |||||||||| ||| | | |||||||||
Sbjct: 44 atgtctagattcattgacatcaatatgaatgtgggaaatgatag 1
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 83 tgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtga 142
|||||| ||||||||||||| |||| ||| | | |||| ||||| | |||||||| |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 143 aacggagg 150
||||||||
Sbjct: 17 aacggagg 10
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacat 101
||||||||||||||||||||||||
Sbjct: 48 atatatgtctagattcattaacat 25
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 114/143 (79%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcattttccatattcgtattaatcttaacgaatc 70
||||||||||||| |||| | |||||||||| || |||| ||| || |||| |||||
Sbjct: 151 tccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatgaatc 92
Query: 71 taaata--gatatatgtctagattcattaacatcaatataaatatagaaaatgatagaat 128
|| ||| |||| ||||||||||||||| |||| || | ||| | | |||| |||||
Sbjct: 91 tatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatgctagaaa 32
Query: 129 gacttacattgtgaaacggagga 151
| |||||||| ||||||||||||
Sbjct: 31 gtcttacattatgaaacggagga 9
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
|||||||||||||||| |||| ||| | |||| ||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 147 gagg 150
||||
Sbjct: 150 gagg 153
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa
Japonica Group
Length = 151
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 2 actacttcatccgtttcacaatataagtcattctagcatt 41
|||||||| ||||||||||||| |||| | ||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 118 aatgatagaatgacttacattgtgaaacggagga 151
|||| ||||| | |||||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggagga 9
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacat 101
||||||||||||||||||||||||
Sbjct: 55 atatatgtctagattcattaacat 78
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 82 atgtctagattcattaacatcaatataaatatagaaaatgatagaatg 129
||||||||||||||||||| | |||| ||| | ||||||| |||||||
Sbjct: 48 atgtctagattcattaacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 80 atatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattg 139
||||||||||||||||||||||| | || ||| | | || | || || | |||||||||
Sbjct: 80 atatgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattg 21
Query: 140 tgaaacggagga 151
||||||||||||
Sbjct: 20 tgaaacggagga 9
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 87 tagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaacg 146
|||||||||||||||| |||| ||| | | |||| ||||| | |||||||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 147 gagg 150
||||
Sbjct: 132 gagg 135
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
|||||||||||||||||| |||| ||||| |||| ||||| |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 145 cggagga 151
| |||||
Sbjct: 15 cagagga 9
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
||||||||||||| |||| |||| ||||| | |||| ||||| | |||| ||| |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 145 cggagg 150
||||||
Sbjct: 130 cggagg 135
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 117 aaatgatagaatgacttacattgtgaaacggagga 151
|||| ||| ||| ||||||||||||||||||||||
Sbjct: 43 aaattatacaataacttacattgtgaaacggagga 9
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcattttccatattcgtatta 57
|||||| ||||||||||||| ||||| ||| ||| |||| ||| |||| |||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatta 87
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 130 acttacattgtgaaacggagga 151
||||||||||||||||||||||
Sbjct: 115 acttacattgtgaaacggagga 136
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 80 atatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattg 139
|||||| |||||||||||||||| | || ||| | | |||| ||||| | |||||||||
Sbjct: 80 atatgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattg 21
Query: 140 tgaaacggagg 150
|||||| ||||
Sbjct: 20 tgaaacagagg 10
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattg 139
|||||| |||||||||||||||| |||| || | | |||| ||||| | |||| ||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 120
Query: 140 tgaaacggagg 150
|||||||||||
Sbjct: 121 tgaaacggagg 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatataagtcattctagcatt 41
|||||||||||||||||| | ||||||||||
Sbjct: 129 tccgtttcacaatataagactttctagcatt 99
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 80 atatgtctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattg 139
|||||| |||||||||||||||| |||| || | | |||| ||||| | |||| ||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 21
Query: 140 tgaaacggagg 150
|||||||||||
Sbjct: 20 tgaaacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatataagtcattctagcatt 41
|||||||||||||||||| | ||||||||||
Sbjct: 12 tccgtttcacaatataagactttctagcatt 42
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 65/78 (83%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 32 ttctagcattttccatattcgtattaatcttaacgaatctaa--atagatatatgtctag 89
|||||||||| |||||||| ||| || |||| ||||||| ||| ||||||| ||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 90 attcattaacatcaatat 107
||||||||||||| ||||
Sbjct: 69 attcattaacatctatat 86
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 65/78 (83%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 32 ttctagcattttccatattcgtattaatcttaacgaatctaaatagatatatgt--ctag 89
|||||||||| ||| |||| ||| || |||| ||||||| ||| |||||||| ||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 90 attcattaacatcaatat 107
||||||||||||| ||||
Sbjct: 69 attcattaacatctatat 86
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatt 41
|||||| ||||||||||||| |||| | ||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcatt 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 118 aatgatagaatgacttacattgtgaaacggagga 151
|||| ||||| | |||||||||||||||||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagga 154
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatcaatat 107
|||||||||||| ||||||| |||||||||
Sbjct: 48 atatatgtctagtttcattagcatcaatat 19
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatat 107
||||||||||||||| |||| |||||||||
Sbjct: 69 atatatgtctagatttattagcatcaatat 98
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatcaatataaat 111
|||||||||||||||||||| ||| ||||||||
Sbjct: 82 atatatgtctagattcattagtatctatataaat 49
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatt 41
|||||| ||||||||||||| |||| |||| |||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcatt 100
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 126 aatgacttacattgtgaaacggagga 151
|||| |||||||||||||||||||||
Sbjct: 108 aatgtcttacattgtgaaacggagga 133
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatt 41
|||||| ||||||||||||| |||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatctaagcctttctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatt 41
|||||| ||||||||||||| |||| | ||||||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcatt 102
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 118 aatgatagaatgacttacattgtgaaacggagga 151
|||| ||||| | |||||||||||||||||||||
Sbjct: 102 aatgctagaaagtcttacattgtgaaacggagga 135
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatat 107
|||||||||||||||||||| |||| ||||
Sbjct: 81 atatatgtctagattcattagcatctatat 110
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 4 tacttcatccgtttcacaatataagtcattctagcatt 41
|||||| ||||||||||||| |||| |||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtgaaacggagga 151
|||| |||||||||||||||||||||
Sbjct: 34 aatgtcttacattgtgaaacggagga 9
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatcaatataaatatagaaaatgatagaatgacttacattgtgaaa 144
|||||||||||||||||| ||| |||| | | |||| ||||| | |||||||| |||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 145 cggagg 150
| ||||
Sbjct: 15 ctgagg 10
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 atgtctagattcattaacatcaatat 107
||||||||||||||||||||| ||||
Sbjct: 53 atgtctagattcattaacatctatat 78
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatcaatat 107
|||| |||||||||||||||||||| ||||
Sbjct: 58 atatgtgtctagattcattaacatctatat 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatcaatat 107
||||||||||||||||||| ||||| ||||
Sbjct: 57 atatatgtctagattcatttacatctatat 86
