miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00451;mir-395;AC146854.19/48268-48370 3880:Medicago truncatula
(barrel medic)
Length = 103
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 45 tgatgaagtgtttgggggaactc 67
|||||||||||||||||||||||
Sbjct: 71 tgatgaagtgtttgggggaactc 93
>RF00451;mir-395;AC145120.1/105818-105725 50514:Solanum demissum
Length = 94
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 gatgaagtgtttgggggaactc 67
||||||||||||||||||||||
Sbjct: 63 gatgaagtgtttgggggaactc 84
>RF00451;mir-395;AC149601.3/8344-8225 3880:Medicago truncatula
(barrel medic)
Length = 120
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 atgaagtgtttgggggaactc 67
|||||||||||||||||||||
Sbjct: 90 atgaagtgtttgggggaactc 110
>RF00451;mir-395;AC149601.3/18879-18765 3880:Medicago truncatula
(barrel medic)
Length = 115
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 atgaagtgtttgggggaactc 67
|||||||||||||||||||||
Sbjct: 85 atgaagtgtttgggggaactc 105
>RF00451;mir-395;AC146854.19/12911-13031 3880:Medicago truncatula
(barrel medic)
Length = 121
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 atgaagtgtttgggggaactc 67
|||||||||||||||||||||
Sbjct: 91 atgaagtgtttgggggaactc 111
>RF00451;mir-395;AC149601.3/13054-12939 3880:Medicago truncatula
(barrel medic)
Length = 116
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 atgaagtgtttgggggaactc 67
|||||||||||||||||||||
Sbjct: 86 atgaagtgtttgggggaactc 106
>RF00451;mir-395;AC149601.3/39285-39203 3880:Medicago truncatula
(barrel medic)
Length = 83
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gagttcctctgaacgcttcat 21
|||||||||||||||||||||
Sbjct: 11 gagttcctctgaacgcttcat 31
>RF00451;mir-395;AC149601.3/73603-73508 3880:Medicago truncatula
(barrel medic)
Length = 96
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 atgaagtgtttgggggaactc 67
|||||||||||||||||||||
Sbjct: 66 atgaagtgtttgggggaactc 86
>RF00451;mir-395;BABK01002710.1/3004-3117 34305:Lotus japonicus
Length = 114
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gagttcctctgaacgcttcatgtga 25
||||||||||||| |||||||||||
Sbjct: 11 gagttcctctgaatgcttcatgtga 35
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 atgaagtgtttgggggaactc 67
|||||||||||||||||||||
Sbjct: 84 atgaagtgtttgggggaactc 104
>RF00451;mir-395;ABXC01004440.1/120848-120746 4558:Sorghum bicolor
(sorghum)
Length = 103
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 atgaagtgtttgggggaactc 67
|||||||||||||||||||||
Sbjct: 73 atgaagtgtttgggggaactc 93
