miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00073;mir-156;AASG02007590.1/3624-3708 3988:Ricinus communis
(castor bean)
Length = 85
Score = 83.8 bits (42), Expect = 3e-16
Identities = 65/70 (92%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 1 cagaagagagagagcacaacccgggaat-ggctaaaggagtctttgcctttgttgggagt 59
|||||||||||||||||||||||| | | |||||||| ||||||||||||||||||||||
Sbjct: 5 cagaagagagagagcacaacccggcattaggctaaag-agtctttgcctttgttgggagt 63
Query: 60 gtgccctctc 69
|||| |||||
Sbjct: 64 gtgctctctc 73
>RF00073;mir-156;AP008215.1/18234552-18234465 39947:Oryza sativa
Japonica Group
Length = 88
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagagagcacaacccgg 24
||||||||||||||||||||||||
Sbjct: 5 cagaagagagagagcacaacccgg 28
>RF00073;mir-156;ABXC01001444.1/103334-103247 4558:Sorghum bicolor
(sorghum)
Length = 88
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagagagcacaaccc 22
||||||||||||||||||||||
Sbjct: 5 cagaagagagagagcacaaccc 26
