miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 262 bits (132), Expect = 1e-69
Identities = 135/136 (99%)
Strand = Plus / Minus
Query: 3 ttgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ttgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgat 77
Query: 63 gttaatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 76 gttaatgaatctaaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaa 17
Query: 123 acggagggagtagcaa 138
||||||||||||||||
Sbjct: 16 acggagggagtagcaa 1
Score = 145 bits (73), Expect = 2e-34
Identities = 123/137 (89%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 3 ttgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgat 62
|||||||| ||||||||||||||| |||||||||||||||| | ||||||||||||||||
Sbjct: 1 ttgctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 60
Query: 63 gttaatgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtga 121
||| | || || | ||||||||||||||||||| | |||||| ||||||||| |||||||
Sbjct: 61 gttta-gattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtga 119
Query: 122 aacggagggagtagcaa 138
|||||||| ||||||||
Sbjct: 120 aacggaggaagtagcaa 136
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 186 bits (94), Expect = 5e-47
Identities = 123/132 (93%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 67 atgaatcta---aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaa 123
||||||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 65 atgaatctagacaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 124
Query: 124 cggagggagtag 135
||||||||||||
Sbjct: 125 cggagggagtag 136
Score = 121 bits (61), Expect = 3e-27
Identities = 116/132 (87%), Gaps = 3/132 (2%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| ||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Query: 66 aat--gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
|| || | |||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 76 gtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 123 acggagggagta 134
||||||| ||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 184 bits (93), Expect = 2e-46
Identities = 122/131 (93%), Gaps = 3/131 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 67 atgaatcta---aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaa 123
||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 75 atgaatctagataacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaa 16
Query: 124 cggagggagta 134
|||||| ||||
Sbjct: 15 cggaggaagta 5
Score = 143 bits (72), Expect = 7e-34
Identities = 118/131 (90%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Query: 67 --atgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaa 123
|| || | ||||||||||||||||||| ||||| || ||||||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 124 cggagggagta 134
|||||||||||
Sbjct: 125 cggagggagta 135
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 184 bits (93), Expect = 2e-46
Identities = 123/132 (93%), Gaps = 2/132 (1%)
Strand = Plus / Minus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||
Sbjct: 136 gctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgt 77
Query: 65 taatgaatc--taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 76 taatgaatcaagatacatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaa 17
Query: 123 acggagggagta 134
||||| ||||||
Sbjct: 16 acggatggagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 112/125 (89%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatataagtcattctagcatatcccacattcatattgatgt-taatgaat 72
||||||||||||| ||||||||| | |||| | |||||||||||||||||| | ||| |
Sbjct: 12 tccgtttcacaatgtaagtcattttggcattttccacattcatattgatgtatcttgatt 71
Query: 73 c-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggga 131
| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 72 cattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaa 131
Query: 132 gtagc 136
|||||
Sbjct: 132 gtagc 136
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 184 bits (93), Expect = 2e-46
Identities = 120/128 (93%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||||||||||||| ||| || | ||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 70 atgaatct--acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacgg 13
Query: 127 agggagta 134
||||||||
Sbjct: 12 agggagta 5
Score = 113 bits (57), Expect = 6e-25
Identities = 111/128 (86%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||||||| | | || | ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgtag 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|| || |||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 65 attcatt--aacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacgg 122
Query: 127 agggagta 134
||| ||||
Sbjct: 123 aggaagta 130
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 182 bits (92), Expect = 8e-46
Identities = 119/128 (92%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| | |||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 72 atgaatctagatatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 127 agggagta 134
||| ||||
Sbjct: 12 aggaagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 115/129 (89%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatct 64
Query: 67 atgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
| || || | | ||| ||||||||||||| |||||||| ||||||||| |||||||||||
Sbjct: 65 a-gattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 123
Query: 126 gagggagta 134
|||||||||
Sbjct: 124 gagggagta 132
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 182 bits (92), Expect = 8e-46
Identities = 119/128 (92%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| | |||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 65 atgaatctagatatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 124
Query: 127 agggagta 134
||| ||||
Sbjct: 125 aggaagta 132
Score = 129 bits (65), Expect = 1e-29
Identities = 115/129 (89%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatct 73
Query: 67 atgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
| || || | | ||| ||||||||||||| |||||||| ||||||||| |||||||||||
Sbjct: 72 a-gattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 14
Query: 126 gagggagta 134
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 176 bits (89), Expect = 5e-44
Identities = 120/129 (93%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||| |||||||||| | ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtta 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 65 -tgaatctaaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgg 123
Query: 127 agggagtag 135
||| |||||
Sbjct: 124 aggaagtag 132
Score = 161 bits (81), Expect = 3e-39
Identities = 118/129 (91%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||
Sbjct: 132 ctacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Query: 66 aatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
| || || |||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 72 ta-gattcataacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 126 gagggagta 134
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 172 bits (87), Expect = 8e-43
Identities = 120/130 (92%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||| |||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 67 atgaatcta--aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 70 atgaatctattaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaac 11
Query: 125 ggagggagta 134
|||| ||||
Sbjct: 10 agaggaagta 1
Score = 155 bits (78), Expect = 2e-37
Identities = 119/130 (91%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||| |||||||||||||||||||| |||||| | ||||||||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 67 at-gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
|| || || | ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 61 atagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Query: 125 ggagggagta 134
|||||||||
Sbjct: 121 agagggagta 130
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 168 bits (85), Expect = 1e-41
Identities = 121/133 (90%), Gaps = 5/133 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 67 atgaatc-----taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtga 121
||||||| | ||||||||||||||||||| |||||||| |||||||||| ||||||
Sbjct: 65 atgaatcttttattaacatcaatatgaatgtgggaaatgctagaatgacttactttgtga 124
Query: 122 aacggagggagta 134
|||||||||||||
Sbjct: 125 aacggagggagta 137
Score = 135 bits (68), Expect = 2e-31
Identities = 118/133 (88%), Gaps = 5/133 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 67 at----gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtga 121
|| || || | | ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 77 ataaaagattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 122 aacggagggagta 134
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 168 bits (85), Expect = 1e-41
Identities = 118/128 (92%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||| | |||||| |||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 70 atga--gttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 127 agggagta 134
||||||||
Sbjct: 12 agggagta 5
Score = 137 bits (69), Expect = 4e-32
Identities = 114/128 (89%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| |||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
| | | |||||| |||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 65 actca--ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 122
Query: 127 agggagta 134
||| ||||
Sbjct: 123 aggaagta 130
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 165 bits (83), Expect = 2e-40
Identities = 122/136 (89%), Gaps = 8/136 (5%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 67 atgaatcta--------aacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||
Sbjct: 80 atgaatctatacatattaacattaatatgaatgtgggaaatgctagaatgacttacattg 21
Query: 119 tgaaacggagggagta 134
||||||||||| ||||
Sbjct: 20 tgaaacggaggaagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 120/136 (88%), Gaps = 8/136 (5%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 67 at-------gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
|| || || | ||||||||||||||||||| |||||||| ||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 119 tgaaacggagggagta 134
||||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 161 bits (81), Expect = 3e-39
Identities = 122/135 (90%), Gaps = 3/135 (2%)
Strand = Plus / Minus
Query: 4 tgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
|||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 138 tgctacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgata 79
Query: 64 ttaatgaatc---taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtg 120
|||||||||| | || |||||| |||||||| |||||||| ||||||||| ||||||
Sbjct: 78 ttaatgaatctcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtg 19
Query: 121 aaacggagggagtag 135
|||||||||||||||
Sbjct: 18 aaacggagggagtag 4
Score = 127 bits (64), Expect = 4e-29
Identities = 119/135 (88%), Gaps = 3/135 (2%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| |||||||||||||||||||||||||||||||| || |||||||| |||||| ||
Sbjct: 4 ctactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatt 63
Query: 66 aatga-at--ctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
||||| || | || |||||| ||||||||| |||||||| ||||||||| ||||||||
Sbjct: 64 aatgagattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaa 123
Query: 123 acggagggagtagca 137
||||||| |||||||
Sbjct: 124 acggaggaagtagca 138
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 161 bits (81), Expect = 3e-39
Identities = 117/128 (91%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| || ||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||||| || | || |||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 65 atgaatatatatat--atatgaatatggaaaatgctagaatgacttacattgtgaaacgg 122
Query: 127 agggagta 134
||||||||
Sbjct: 123 agggagta 130
Score = 89.7 bits (45), Expect = 9e-18
Identities = 108/128 (84%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | ||| |||||||| || |
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatatatatatat 71
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|| || |||| ||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 70 attcatt--aacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgg 13
Query: 127 agggagta 134
||| ||||
Sbjct: 12 aggaagta 5
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 161 bits (81), Expect = 3e-39
Identities = 119/131 (90%), Gaps = 3/131 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 67 atgaatctaaacat---caatatgaatgtggaaaatgctaaaatgacttacattgtgaaa 123
||||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 75 atgaatctagacatatataatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 124 cggagggagta 134
||||||||||
Sbjct: 15 tggagggagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 113/132 (85%), Gaps = 5/132 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattg---atg 63
|||| ||||| ||||||||| |||||||||||||||| ||||||||||||||| |||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatattatatatg 64
Query: 64 ttaatgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
| | || || | || || ||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 65 tcta-gattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaa 123
Query: 123 acggagggagta 134
||||||| ||||
Sbjct: 124 acggaggaagta 135
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 159 bits (80), Expect = 1e-38
Identities = 118/130 (90%), Gaps = 3/130 (2%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 66 aatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||||
Sbjct: 64 aatgaat---tacatcaatatgaatatggaaaatgctagaatgacttacattatgaaacg 120
Query: 126 gagggagtag 135
||| ||||||
Sbjct: 121 gagagagtag 130
Score = 121 bits (61), Expect = 3e-27
Identities = 108/123 (87%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 13 ctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaat 72
|||||||||| ||| |||||||||||||||| | ||| |||||||||||||| | | | |
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgatgtaattcatt 64
Query: 73 ctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggag 132
||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 63 ---aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 133 tag 135
|||
Sbjct: 6 tag 4
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 157 bits (79), Expect = 5e-38
Identities = 121/136 (88%), Gaps = 8/136 (5%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 67 atgaatcta--------aacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||
Sbjct: 80 atgaatctatacatattaacattaatatgaatgtgggaaatgctagaatgacttacattg 21
Query: 119 tgaaacggagggagta 134
||||||||||| ||||
Sbjct: 20 tgaaacggaggaagta 5
Score = 147 bits (74), Expect = 5e-35
Identities = 121/136 (88%), Gaps = 8/136 (5%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 67 at-------gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
|| || || | |||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 119 tgaaacggagggagta 134
||||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 157 bits (79), Expect = 5e-38
Identities = 118/132 (89%), Gaps = 8/132 (6%)
Strand = Plus / Plus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||| ||||||||||||||| |||||||||||||||| |||||||||||||| |||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgt 62
Query: 65 taatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
|||||||||| |||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 63 taatgaatct--------atatgaatgtgggaaatgctagaatgacttacattgtgaaac 114
Query: 125 ggagggagtagc 136
||||||||||||
Sbjct: 115 ggagggagtagc 126
Score = 123 bits (62), Expect = 7e-28
Identities = 115/132 (87%), Gaps = 8/132 (6%)
Strand = Plus / Minus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||| ||||||||||||||| |||||||||||||||| |||||||||||||| |||
Sbjct: 126 gctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagat-- 69
Query: 65 taatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
| | | |||||| |||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 68 ---tcatt---aacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Query: 125 ggagggagtagc 136
||||||||||||
Sbjct: 14 ggagggagtagc 3
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 157 bits (79), Expect = 5e-38
Identities = 116/128 (90%), Gaps = 4/128 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||||||| |||||| | ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||| |||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 65 atga----taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacgg 120
Query: 127 agggagta 134
||||||||
Sbjct: 121 agggagta 128
Score = 139 bits (70), Expect = 1e-32
Identities = 115/128 (89%), Gaps = 4/128 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||| | ||| |||||| | ||||||||||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
| | | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 -tcatt---aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 13
Query: 127 agggagta 134
||||||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 157 bits (79), Expect = 5e-38
Identities = 121/136 (88%), Gaps = 8/136 (5%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 67 atgaatcta--------aacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||
Sbjct: 80 atgaatctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattg 21
Query: 119 tgaaacggagggagta 134
||||||||||||||||
Sbjct: 20 tgaaacggagggagta 5
Score = 141 bits (71), Expect = 3e-33
Identities = 119/136 (87%), Gaps = 8/136 (5%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 67 atgaatcta--------aacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
||||||||| ||||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 65 atgaatctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacatta 124
Query: 119 tgaaacggagggagta 134
||||||||||| ||||
Sbjct: 125 tgaaacggaggaagta 140
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 155 bits (78), Expect = 2e-37
Identities = 119/132 (90%), Gaps = 3/132 (2%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 67 atgaatctaaa---catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaa 123
|||||||| | |||||||||||||||| |||||||| |||||||||||| ||||||
Sbjct: 75 atgaatctcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaa 16
Query: 124 cggagggagtag 135
| ||||||||||
Sbjct: 15 cagagggagtag 4
Score = 105 bits (53), Expect = 2e-22
Identities = 114/132 (86%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| |||| ||||||| || |||||||||||||||| || |||||||||||||||| |
Sbjct: 4 ctactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgct 63
Query: 66 aatga-at--ctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
||||| || | | |||||||||||||||| |||||||| ||||||||| ||||||||
Sbjct: 64 aatgagattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaa 123
Query: 123 acggagggagta 134
||||||| ||||
Sbjct: 124 acggaggaagta 135
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 155 bits (78), Expect = 2e-37
Identities = 120/132 (90%), Gaps = 4/132 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatattt 77
Query: 67 a--tgaatcta--aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
| | ||| || || |||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 76 atctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaa 17
Query: 123 acggagggagta 134
||||||||||||
Sbjct: 16 acggagggagta 5
Score = 125 bits (63), Expect = 2e-28
Identities = 115/132 (87%), Gaps = 4/132 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | ||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 67 atgaat----ctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
|| ||| |||| |||||||||||||||| |||||||| ||||||||| ||||||||
Sbjct: 65 ataaatttagataaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaa 124
Query: 123 acggagggagta 134
||||||| ||||
Sbjct: 125 acggaggaagta 136
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 153 bits (77), Expect = 7e-37
Identities = 121/137 (88%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 67 atgaatc---------taaacatcaatatgaatgtggaaaatgctaaaatgacttacatt 117
||||||| | |||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 65 atgaatcattgattcattaacatcaatatgaatgtgagaaatgctagaatgaattacatt 124
Query: 118 gtgaaacggagggagta 134
|||||||||||||||||
Sbjct: 125 gtgaaacggagggagta 141
Score = 137 bits (69), Expect = 4e-32
Identities = 119/137 (86%), Gaps = 9/137 (6%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||| |||||||||||| || |||||||||||||||||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 67 atgaatcta---------aacatcaatatgaatgtggaaaatgctaaaatgacttacatt 117
||||||| | ||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 81 atgaatcaatgattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 118 gtgaaacggagggagta 134
|||||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 153 bits (77), Expect = 7e-37
Identities = 116/129 (89%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||| |||||| ||||||||| |||||| ||||| ||| ||||||||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||
Sbjct: 65 atgaatctagacatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacgg 124
Query: 127 agggagtag 135
||| |||||
Sbjct: 125 aggaagtag 133
Score = 123 bits (62), Expect = 7e-28
Identities = 115/130 (88%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||
Sbjct: 133 ctacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgtc 74
Query: 66 aatgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
| || || | | ||||||||| ||| ||| |||||||| |||||||||||||||| |||
Sbjct: 73 ta-gattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaac 15
Query: 125 ggagggagta 134
||||||||||
Sbjct: 14 ggagggagta 5
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 151 bits (76), Expect = 3e-36
Identities = 120/135 (88%), Gaps = 6/135 (4%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 67 atgaatcta------aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtg 120
||||||| | | ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 78 atgaatcgattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 121 aaacggagggagtag 135
|||||||||||||||
Sbjct: 18 aaacggagggagtag 4
Score = 151 bits (76), Expect = 3e-36
Identities = 120/135 (88%), Gaps = 6/135 (4%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||| |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 63
Query: 66 aatgaatc------taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgt 119
|||||||| | | ||||||||||||||||| |||||||| ||||||||||||| |
Sbjct: 64 aatgaatcgattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattat 123
Query: 120 gaaacggagggagta 134
|||||||||||||||
Sbjct: 124 gaaacggagggagta 138
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 149 bits (75), Expect = 1e-35
Identities = 123/142 (86%), Gaps = 14/142 (9%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 67 atgaatcta--------------aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||| ||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 86 atgtatctatatctagatacattaacatcaatatgaatgtggaaaatgctagaatgactt 27
Query: 113 acattgtgaaacggagggagta 134
||||||||||||||||||||||
Sbjct: 26 acattgtgaaacggagggagta 5
Score = 117 bits (59), Expect = 4e-26
Identities = 119/142 (83%), Gaps = 14/142 (9%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 67 atgaatcta--------------aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||| ||||| ||||||||||||||||||| |||||||| ||||||||
Sbjct: 65 atgtatctagatatagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 124
Query: 113 acattgtgaaacggagggagta 134
|||||||| |||||||| ||||
Sbjct: 125 acattgtggaacggaggaagta 146
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 149 bits (75), Expect = 1e-35
Identities = 126/147 (85%), Gaps = 17/147 (11%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 66 aatgaatcta-----------------aacatcaatatgaatgtggaaaatgctaaaatg 108
|||||||||| ||||||||||||||||||| |||||||| ||||
Sbjct: 64 aatgaatctagacattctagattcattaacatcaatatgaatgtgggaaatgctagaatg 123
Query: 109 acttacattgtgaaacggagggagtag 135
|||||||||||||||||||||||||||
Sbjct: 124 acttacattgtgaaacggagggagtag 150
Score = 133 bits (67), Expect = 7e-31
Identities = 124/147 (84%), Gaps = 17/147 (11%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 66 aatgaatcta-----------------aacatcaatatgaatgtggaaaatgctaaaatg 108
|||||||||| ||||||||||||||||||| |||||||| ||||
Sbjct: 90 aatgaatctagaatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatg 31
Query: 109 acttacattgtgaaacggagggagtag 135
||||||||||||||||||||| |||||
Sbjct: 30 acttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 149 bits (75), Expect = 1e-35
Identities = 118/132 (89%), Gaps = 4/132 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 67 atgaatc----taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
||||||| || | |||||||||||| ||| |||||||| ||||||||||||||||||
Sbjct: 76 atgaatctagatagatatcaatatgaatatgggaaatgctagaatgacttacattgtgaa 17
Query: 123 acggagggagta 134
||||||| ||||
Sbjct: 16 acggaggaagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 117/132 (88%), Gaps = 4/132 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatatct 64
Query: 67 at---gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
|| || || | ||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 65 atctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaa 124
Query: 123 acggagggagta 134
||||||||||||
Sbjct: 125 acggagggagta 136
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 149 bits (75), Expect = 1e-35
Identities = 121/137 (88%), Gaps = 7/137 (5%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| |||||||||||||||| ||| | |||||||||||||||||||
Sbjct: 140 ctacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtt 81
Query: 66 aatgaatcta-------aacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
|||||||||| |||||||| || |||||| ||||||||| |||||||||||||
Sbjct: 80 aatgaatctagacatataacatcaacataaatgtgaaaaatgctagaatgacttacatta 21
Query: 119 tgaaacggagggagtag 135
|||||||||||||||||
Sbjct: 20 tgaaacggagggagtag 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 115/137 (83%), Gaps = 7/137 (5%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| ||| |||||||||||||||| | |||||| || ||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtt 63
Query: 66 a-atg-----aatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
| ||| | || | ||||||||||||||||||||||||| || ||||||||| |||
Sbjct: 64 atatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatta 123
Query: 119 tgaaacggagggagtag 135
||||||||||| |||||
Sbjct: 124 tgaaacggaggaagtag 140
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 147 bits (74), Expect = 5e-35
Identities = 119/132 (90%), Gaps = 4/132 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatattt 77
Query: 67 a--tgaatcta--aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
| | ||| || || |||||||| ||||||| |||||||| ||||||||||||||||||
Sbjct: 76 atctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 123 acggagggagta 134
||||||||||||
Sbjct: 16 acggagggagta 5
Score = 133 bits (67), Expect = 7e-31
Identities = 116/132 (87%), Gaps = 4/132 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 67 atgaat----ctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
|| ||| |||| |||||||||||||||| |||||||| ||||||||| ||||||||
Sbjct: 65 ataaatttagataaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaa 124
Query: 123 acggagggagta 134
||||||| ||||
Sbjct: 125 acggaggaagta 136
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 147 bits (74), Expect = 5e-35
Identities = 116/129 (89%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| ||||||||||||| || || |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| ||| |||||||||||| |||||||| ||||||||||||| ||||| ||
Sbjct: 65 atgaatctagaca--aatatgaatgtgagaaatgctagaatgacttacattatgaaatgg 122
Query: 127 agggagtag 135
|||||||||
Sbjct: 123 agggagtag 131
Score = 77.8 bits (39), Expect = 4e-14
Identities = 110/130 (84%), Gaps = 4/130 (3%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||| ||||| ||| |||||||||||||||| || |||||||||||| |||
Sbjct: 131 ctactccctccatttcataatgtaagtcattctagcatttctcacattcatatt--tgtc 74
Query: 66 aatgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
| || || | |||||||||||||||||| |||| ||| ||||||||||||| ||||||
Sbjct: 73 ta-gattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaac 15
Query: 125 ggagggagta 134
||||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 145 bits (73), Expect = 2e-34
Identities = 119/135 (88%), Gaps = 7/135 (5%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| ||||||||| |||||| || || ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 67 atgaatctaaacat-------caatatgaatgtggaaaatgctaaaatgacttacattgt 119
||||||||| |||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 65 atgaatctagacatatagcatcaatatgaatgtggaaaatgctaaaatgacttatattgt 124
Query: 120 gaaacggagggagta 134
|||||||||||||||
Sbjct: 125 gaaacggagggagta 139
Score = 93.7 bits (47), Expect = 6e-19
Identities = 115/135 (85%), Gaps = 7/135 (5%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatgcta 80
Query: 67 -at-----gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgt 119
|| || || | | ||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 79 tatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgt 20
Query: 120 gaaacggagggagta 134
|||||||||| ||||
Sbjct: 19 gaaacggaggaagta 5
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 145 bits (73), Expect = 2e-34
Identities = 123/140 (87%), Gaps = 11/140 (7%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 67 atgaatcta----------aacatcaatatgaatgtggaaaatgctaaa-atgacttaca 115
||||||||| | ||||||||||||||||| |||||||||| ||||||||||
Sbjct: 65 atgaatctagctatacattagcatcaatatgaatgtgggaaatgctaaacatgacttaca 124
Query: 116 ttgtgaaacggagggagtag 135
||||||||||||||||||||
Sbjct: 125 ttgtgaaacggagggagtag 144
Score = 111 bits (56), Expect = 3e-24
Identities = 120/140 (85%), Gaps = 11/140 (7%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcat-tctagcatatcccacattcatattgatgt 64
||||| ||||||||||||||| |||||||| | |||||| |||||||||||||||||||
Sbjct: 144 ctactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgc 85
Query: 65 taatgaat--ctaaa--------catcaatatgaatgtggaaaatgctaaaatgacttac 114
||||| || ||| | ||||||||||||||||| |||||||||||||||||||
Sbjct: 84 taatgtatagctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttac 25
Query: 115 attgtgaaacggagggagta 134
||||||||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 145 bits (73), Expect = 2e-34
Identities = 123/140 (87%), Gaps = 11/140 (7%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 67 atgaatcta----------aacatcaatatgaatgtggaaaatgctaaa-atgacttaca 115
||||||||| | ||||||||||||||||| |||||||||| ||||||||||
Sbjct: 83 atgaatctagctatacattagcatcaatatgaatgtgggaaatgctaaacatgacttaca 24
Query: 116 ttgtgaaacggagggagtag 135
||||||||||||||||||||
Sbjct: 23 ttgtgaaacggagggagtag 4
Score = 111 bits (56), Expect = 3e-24
Identities = 120/140 (85%), Gaps = 11/140 (7%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcat-tctagcatatcccacattcatattgatgt 64
||||| ||||||||||||||| |||||||| | |||||| |||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgc 63
Query: 65 taatgaat--ctaaa--------catcaatatgaatgtggaaaatgctaaaatgacttac 114
||||| || ||| | ||||||||||||||||| |||||||||||||||||||
Sbjct: 64 taatgtatagctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttac 123
Query: 115 attgtgaaacggagggagta 134
||||||||||||||| ||||
Sbjct: 124 attgtgaaacggaggaagta 143
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 143 bits (72), Expect = 7e-34
Identities = 119/135 (88%), Gaps = 6/135 (4%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||| |||||| |||||||||||||||||||| | ||||||||||| ||||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 67 atgaatctaaa------catcaatatgaatgtggaaaatgctaaaatgacttacattgtg 120
||||||||| | ||||||||||||||||| |||||||| ||||||||||||| ||
Sbjct: 65 atgaatctagatagtgacatcaatatgaatgtgggaaatgctacaatgacttacattatg 124
Query: 121 aaacggagggagtag 135
|||||||||||||||
Sbjct: 125 aaacggagggagtag 139
Score = 85.7 bits (43), Expect = 1e-16
Identities = 113/135 (83%), Gaps = 6/135 (4%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| ||| ||||||||| |||||| ||||||||||||||||||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgtc 80
Query: 66 aat-----gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgt 119
| | || || | | ||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 79 actatctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattat 20
Query: 120 gaaacggagggagta 134
||||| |||| ||||
Sbjct: 19 gaaacagaggaagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 143 bits (72), Expect = 7e-34
Identities = 122/141 (86%), Gaps = 12/141 (8%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 145 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 86
Query: 66 aatgaatcta------------aacatcaatatgaatgtggaaaatgctaaaatgactta 113
|| |||||| ||||||||||||||||||| |||||||| |||| ||||
Sbjct: 85 cataaatctagacaaattcatgaacatcaatatgaatgtgggaaatgctagaatggctta 26
Query: 114 cattgtgaaacggagggagta 134
|||||||||||||||||||||
Sbjct: 25 cattgtgaaacggagggagta 5
Score = 125 bits (63), Expect = 2e-28
Identities = 121/141 (85%), Gaps = 12/141 (8%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 67 atgaat----cta--------aacatcaatatgaatgtggaaaatgctaaaatgacttac 114
|||||| ||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct: 65 atgaatttgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttac 124
Query: 115 attgtgaaacggagggagtag 135
||||||||||||||| |||||
Sbjct: 125 attgtgaaacggaggaagtag 145
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 141 bits (71), Expect = 3e-33
Identities = 117/132 (88%), Gaps = 4/132 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||| ||| | ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 67 atgaatctaaa----catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaa 122
|||||| || | ||||||||||||| || ||||| ||||||||||||||||| ||||
Sbjct: 65 atgaatgtagatagtcatcaatatgaatatgaaaaatactaaaatgacttacattatgaa 124
Query: 123 acggagggagta 134
||||||||||||
Sbjct: 125 acggagggagta 136
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||
Sbjct: 63 aacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 141 bits (71), Expect = 3e-33
Identities = 119/136 (87%), Gaps = 8/136 (5%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 67 atgaatc--------taaacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
||||||| || ||||||||||| |||| ||||||||| ||||||||||||||
Sbjct: 65 atgaatctagacatatatacatcaatatgtatgtacaaaatgctagaatgacttacattg 124
Query: 119 tgaaacggagggagta 134
||||||||||| ||||
Sbjct: 125 tgaaacggaggaagta 140
Score = 101 bits (51), Expect = 2e-21
Identities = 114/136 (83%), Gaps = 8/136 (5%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| | |||| |||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagtcattctagcattttgtacatacatattgatgtat 81
Query: 67 atgaatcta--------aacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
|| |||| ||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 80 atatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 21
Query: 119 tgaaacggagggagta 134
||||||||||| ||||
Sbjct: 20 tgaaacggaggtagta 5
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 139 bits (70), Expect = 1e-32
Identities = 114/129 (88%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| ||
Sbjct: 127 ctacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatt 68
Query: 66 aatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
||||||| || ||||||| |||| |||||||| |||||||||||||||||||||
Sbjct: 67 aatgaat------atatatatgaacgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 126 gagggagta 134
|||||||||
Sbjct: 13 gagggagta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 110/129 (85%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| |||||| ||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatatatatattc 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|| ||| |||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 65 attaat------atcaatatgaatgttggaaatgctagaatgacttacattgtgaaacgg 118
Query: 127 agggagtag 135
||| |||||
Sbjct: 119 aggaagtag 127
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 139 bits (70), Expect = 1e-32
Identities = 124/145 (85%), Gaps = 14/145 (9%)
Strand = Plus / Plus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||||||||||||||| ||| |||||||||||||||| | ||||||||||||||||||
Sbjct: 3 gctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 65 taatgaatcta--------------aacatcaatatgaatgtggaaaatgctaaaatgac 110
||||||||||| ||||||||||||||||||| |||||||| ||||||
Sbjct: 63 taatgaatctatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgac 122
Query: 111 ttacattgtgaaacggagggagtag 135
|||||||||||||| ||||||||||
Sbjct: 123 ttacattgtgaaaccgagggagtag 147
Score = 131 bits (66), Expect = 3e-30
Identities = 123/145 (84%), Gaps = 14/145 (9%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| |||| |||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 147 ctactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 66 aatgaatcta--------------aacatcaatatgaatgtggaaaatgctaaaatgact 111
|||||| ||| |||||||||||||||||||||||||||| |||||||
Sbjct: 87 aatgaaactagacatagattcattaacatcaatatgaatgtggaaaatgctagaatgact 28
Query: 112 tacattgtgaaacggagggagtagc 136
|||||| ||||||||||| ||||||
Sbjct: 27 tacattatgaaacggaggaagtagc 3
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 139 bits (70), Expect = 1e-32
Identities = 119/134 (88%), Gaps = 6/134 (4%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtta 79
Query: 67 at-----gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtg 120
|| || || | ||||||||||||||| | |||||||||| ||||||||||||||||
Sbjct: 78 atatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtg 19
Query: 121 aaacggagggagta 134
||||||||||||||
Sbjct: 18 aaacggagggagta 5
Score = 117 bits (59), Expect = 4e-26
Identities = 115/134 (85%), Gaps = 6/134 (4%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | | | ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 67 atgaatcta------aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtg 120
||||||||| ||||||||||||||||| | |||| || ||||||||| ||||||
Sbjct: 65 atgaatctagatattaacatcaatatgaatgtaggaaatagtagaatgacttatattgtg 124
Query: 121 aaacggagggagta 134
||||||||| ||||
Sbjct: 125 aaacggaggaagta 138
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 137 bits (69), Expect = 4e-32
Identities = 105/117 (89%)
Strand = Plus / Minus
Query: 8 acttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaa 67
||||||||||||||||||||||||||||| |||||| | || ||||||||||||| |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72
Query: 68 tgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
|||||||| |||| ||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 71 tgaatctagacatatatatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
Score = 95.6 bits (48), Expect = 1e-19
Identities = 107/124 (86%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||| ||| |||||||||| |||||||||||||||| |||| ||||||||| ||||
Sbjct: 5 tactttctctgtttcacaatgtaagtcattctagcatttcccgcattcatatatatgtct 64
Query: 67 atgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
| || || | | ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 65 a-gattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacg 123
Query: 126 gagg 129
||||
Sbjct: 124 gagg 127
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 137 bits (69), Expect = 4e-32
Identities = 114/128 (89%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||||||||| | ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| |||| ||||||||||| |||||||| ||| ||||||||||||||||||
Sbjct: 70 atgaatctagacat--atatgaatgtgagaaatgctagaataacttacattgtgaaacgg 13
Query: 127 agggagta 134
||| ||||
Sbjct: 12 aggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 110/129 (85%), Gaps = 4/129 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| ||||| |||||||||| || ||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat--atgtct 62
Query: 67 atgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
| || || | | | ||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 63 a-gattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 121
Query: 126 gagggagta 134
|||| ||||
Sbjct: 122 gaggaagta 130
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 137 bits (69), Expect = 4e-32
Identities = 117/132 (88%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||||||||||||||| | |||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 66 aatgaatct--aaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaa 123
||||||||| |||||||| | | ||||||| ||||| || |||||||| |||| |||||
Sbjct: 64 aatgaatctagaaacatcactgtaaatgtgggaaatgttagaatgacttccattatgaaa 123
Query: 124 cggagggagtag 135
|||||| |||||
Sbjct: 124 cggaggaagtag 135
Score = 127 bits (64), Expect = 4e-29
Identities = 117/132 (88%), Gaps = 2/132 (1%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| ||| ||||||||||| ||| ||||||||| | | |||||||
Sbjct: 135 ctacttcctccgtttcataatggaagtcattctaacatttcccacatttacagtgatgtt 76
Query: 66 aat-gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaa 123
| || || | |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 124 cggagggagtag 135
||||||||||||
Sbjct: 15 cggagggagtag 4
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 135 bits (68), Expect = 2e-31
Identities = 113/128 (88%), Gaps = 5/128 (3%)
Strand = Plus / Plus
Query: 12 cctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaa 71
|||||||||||||||||||||||||||||||| || || || |||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Query: 72 tcta-----aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||| |||||||| ||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 70 tctacatataacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacgg 129
Query: 127 agggagta 134
||| ||||
Sbjct: 130 aggaagta 137
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 133 bits (67), Expect = 7e-31
Identities = 111/126 (88%), Gaps = 6/126 (4%)
Strand = Plus / Minus
Query: 12 cctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaa 71
||||||||||||||| |||||||||||||||| || |||||||||||| |||| ||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaa 74
Query: 72 tc------taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
|| || ||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 73 tctagacatatacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 126 gaggga 131
||||||
Sbjct: 13 gaggga 8
Score = 101 bits (51), Expect = 2e-21
Identities = 112/131 (85%), Gaps = 6/131 (4%)
Strand = Plus / Plus
Query: 12 cctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaat--- 68
||||||||||||||| |||||||||||||||| || ||||||||||||||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtatatgtc 69
Query: 69 --gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
|| || | |||| |||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 70 tagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 129
Query: 126 gagggagtagc 136
|||||| ||||
Sbjct: 130 gagggattagc 140
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 133 bits (67), Expect = 7e-31
Identities = 115/130 (88%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||| ||||||||| | ||| ||||||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 67 atgaatctaaa--catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
||||||||| | || |||||||||||||||||| || ||||||||||||| ||||||
Sbjct: 74 atgaatctagatgaatatatatgaatgtggaaaatgatagaatgacttacattatgaaac 15
Query: 125 ggagggagta 134
||||||||||
Sbjct: 14 ggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||| ||||||||| |||||||||||| || |||||||||||||||||||||| ||||
Sbjct: 76 aacattaatatgaatatggaaaatgctagaaggacttacattgtgaaacggaggaagta 134
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 131 bits (66), Expect = 3e-30
Identities = 114/129 (88%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| ||| |||| ||||||| ||| | ||||||||||||||||||
Sbjct: 131 ctacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtt 72
Query: 66 aatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
|||||||||| | | |||||||||||| |||||||| ||||||||| |||||||||||
Sbjct: 71 aatgaatctagatag--atatgaatgtgggaaatgctagaatgacttatattgtgaaacg 14
Query: 126 gagggagta 134
|||||||||
Sbjct: 13 gagggagta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 111/129 (86%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatctatctag 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|| | | |||||||||||||||||| |||||| || |||| |||||||| ||||||||
Sbjct: 65 attca--ttaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacgg 122
Query: 127 agggagtag 135
||| |||||
Sbjct: 123 aggaagtag 131
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 129 bits (65), Expect = 1e-29
Identities = 115/132 (87%), Gaps = 6/132 (4%)
Strand = Plus / Minus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||| ||||||||||| ||| |||||||||||||||| || || |||||||||||| |
Sbjct: 128 gctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatat 69
Query: 65 taatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
||||||||||| ||||| |||||||||||||||| ||||||||| ||||||||||
Sbjct: 68 taatgaatcta------aatataaatgtggaaaatgctagaatgacttatattgtgaaac 15
Query: 125 ggagggagtagc 136
||||| ||||||
Sbjct: 14 ggaggaagtagc 3
Score = 113 bits (57), Expect = 6e-25
Identities = 113/132 (85%), Gaps = 6/132 (4%)
Strand = Plus / Plus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| | |
Sbjct: 3 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagat 62
Query: 65 taatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
| || ||| |||||||||||| || |||||||| ||||||||||||| ||||||
Sbjct: 63 tcattaat------atcaatatgaatatgagaaatgctagaatgacttacattatgaaac 116
Query: 125 ggagggagtagc 136
||||||||||||
Sbjct: 117 ggagggagtagc 128
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 129 bits (65), Expect = 1e-29
Identities = 122/144 (84%), Gaps = 14/144 (9%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||| ||||||||||||||||||||||| | | | ||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 67 atgaatcta--------------aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||| ||||||||||||||||||| ||||| |||||||||||
Sbjct: 86 atgaatctagatctagattcattaacatcaatatgaatgtgggaaatggtaaaatgactt 27
Query: 113 acattgtgaaacggagggagtagc 136
||||| ||||||||||||||||||
Sbjct: 26 acattatgaaacggagggagtagc 3
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||| ||||||||||| ||| ||||||||| || ||| ||||||||||||||||||||
Sbjct: 3 gctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgt 62
Query: 65 taatgaatcta 75
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 129 bits (65), Expect = 1e-29
Identities = 122/144 (84%), Gaps = 14/144 (9%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||| ||||||||||||||||||||||| | | | ||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 67 atgaatcta--------------aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||| ||||||||||||||||||| ||||| |||||||||||
Sbjct: 65 atgaatctagatctagattcattaacatcaatatgaatgtgggaaatggtaaaatgactt 124
Query: 113 acattgtgaaacggagggagtagc 136
||||| ||||||||||||||||||
Sbjct: 125 acattatgaaacggagggagtagc 148
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||| ||||||||||| ||| ||||||||| || ||| ||||||||||||||||||||
Sbjct: 148 gctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgt 89
Query: 65 taatgaatcta 75
|||||||||||
Sbjct: 88 taatgaatcta 78
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 127 bits (64), Expect = 4e-29
Identities = 119/140 (85%), Gaps = 13/140 (9%)
Strand = Plus / Plus
Query: 8 acttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaa 67
||||||||||||||| ||| |||||||||||||||| || |||||| |||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaa 65
Query: 68 tgaatcta-------------aacatcaatatgaatgtggaaaatgctaaaatgacttac 114
| |||||| ||||||||||||||| |||||||||||| ||||||||||
Sbjct: 66 taaatctagtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttac 125
Query: 115 attgtgaaacggagggagta 134
||||||||||||||||||||
Sbjct: 126 attgtgaaacggagggagta 145
Score = 103 bits (52), Expect = 6e-22
Identities = 113/136 (83%), Gaps = 13/136 (9%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 67 atgaatcta-------------aacatcaatatgaatgtggaaaatgctaaaatgactta 113
||||||||| ||||||||||| |||||| |||||||| |||||||||
Sbjct: 85 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 26
Query: 114 cattgtgaaacggagg 129
|||| |||||||||||
Sbjct: 25 cattatgaaacggagg 10
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 127 bits (64), Expect = 4e-29
Identities = 112/128 (87%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||| ||||| ||| |||||||||||||||| | ||||||||||| |||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| |||| |||||||| | | ||||||| ||||||||||||| ||||||||
Sbjct: 72 atgaatctagacatatatatgaatataggtaatgctagaatgacttacattatgaaacgg 13
Query: 127 agggagta 134
||||||||
Sbjct: 12 agggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 106/129 (82%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||||||||||||||| || | |||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatatatatgtct 64
Query: 67 atgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
| || || | |||||| ||||||||||| ||||||| ||||||||||||| ||||| |
Sbjct: 65 a-gattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaatg 123
Query: 126 gagggagta 134
|||| ||||
Sbjct: 124 gaggaagta 132
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 127 bits (64), Expect = 4e-29
Identities = 113/128 (88%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| | ||| || ||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||||| | | ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 71 atgaat-tcatattcattatgagagtagaaaatgctaaaatgacttacattgtgaaacgg 13
Query: 127 agggagta 134
||||||||
Sbjct: 12 agggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||| || ||| ||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 73 aacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 125 bits (63), Expect = 2e-28
Identities = 120/142 (84%), Gaps = 14/142 (9%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||| ||||||||||||| |||||||||||||||| || |||||||||||||||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 67 atgaatcta--------------aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||| || |||||||| ||| |||||||||||| ||||||||
Sbjct: 65 atgaatctagatgtagattcattaatatcaatataaatatggaaaatgctagaatgactt 124
Query: 113 acattgtgaaacggagggagta 134
||||||||||||||||||||||
Sbjct: 125 acattgtgaaacggagggagta 146
Score = 95.6 bits (48), Expect = 1e-19
Identities = 111/135 (82%), Gaps = 14/135 (10%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | ||| ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 67 atgaatcta--------------aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||| |||||||||||||||||| |||||||| ||||||||
Sbjct: 86 atgaatctacatctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 27
Query: 113 acattgtgaaacgga 127
|||||||||||||||
Sbjct: 26 acattgtgaaacgga 12
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 125 bits (63), Expect = 2e-28
Identities = 120/142 (84%), Gaps = 14/142 (9%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||| ||||||||||||| |||||||||||||||| || |||||||||||||||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 67 atgaatcta--------------aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||| || |||||||| ||| |||||||||||| ||||||||
Sbjct: 65 atgaatctagatgtagattcattaatatcaatataaatatggaaaatgctataatgactt 124
Query: 113 acattgtgaaacggagggagta 134
||||||||||||||||||||||
Sbjct: 125 acattgtgaaacggagggagta 146
Score = 87.7 bits (44), Expect = 4e-17
Identities = 110/135 (81%), Gaps = 14/135 (10%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||||||| |||||| | ||| ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 67 atgaatcta--------------aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||| |||||||||||||||||| |||||||| ||||||||
Sbjct: 86 atgaatctacatctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 27
Query: 113 acattgtgaaacgga 127
|||||||||||||||
Sbjct: 26 acattgtgaaacgga 12
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 125 bits (63), Expect = 2e-28
Identities = 121/144 (84%), Gaps = 16/144 (11%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 67 atgaatcta----------------aacatcaatatgaatgtggaaaatgctaaaatgac 110
||||||||| ||||||||||||||||||| |||||||| ||||||
Sbjct: 65 atgaatctagacatatatattcattaacatcaatatgaatgtgggaaatgctagaatgac 124
Query: 111 ttacattgtgaaacggagggagta 134
|||||||||||||||| |||||||
Sbjct: 125 ttacattgtgaaacggggggagta 148
Score = 101 bits (51), Expect = 2e-21
Identities = 112/136 (82%), Gaps = 16/136 (11%)
Strand = Plus / Minus
Query: 15 ccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatct 74
|||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatat 81
Query: 75 a----------------aacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
| ||||| ||||| ||||||| |||||||| ||||||||||||||
Sbjct: 80 atatgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttacattg 21
Query: 119 tgaaacggagggagta 134
||||||||||| ||||
Sbjct: 20 tgaaacggaggaagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 125 bits (63), Expect = 2e-28
Identities = 118/138 (85%), Gaps = 10/138 (7%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| || ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 67 atgaatcta----------aacatcaatatgaatgtggaaaatgctaaaatgacttacat 116
||||||||| |||||||||||||| ||| |||||||| ||||||||||||
Sbjct: 65 atgaatctagatatccattgacatcaatatgaatatgggaaatgctagaatgacttacat 124
Query: 117 tgtgaaacggagggagta 134
||||||||||||| ||||
Sbjct: 125 tgtgaaacggaggaagta 142
Score = 123 bits (62), Expect = 7e-28
Identities = 119/138 (86%), Gaps = 10/138 (7%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||| |
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtca 83
Query: 67 atg--aatcta--------aacatcaatatgaatgtggaaaatgctaaaatgacttacat 116
||| ||||| || ||||||||||||||| |||||||| ||||||||||||
Sbjct: 82 atggatatctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacat 23
Query: 117 tgtgaaacggagggagta 134
||||||||||||||||||
Sbjct: 22 tgtgaaacggagggagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 123 bits (62), Expect = 7e-28
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 67 atgaatctaaacat 80
||||||||||||||
Sbjct: 97 atgaatctaaacat 84
Score = 121 bits (61), Expect = 3e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 101 bits (51), Expect = 2e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 99 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 157
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 63 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 123 bits (62), Expect = 7e-28
Identities = 113/129 (87%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| |||||||||||| || ||||||| |||| ||| | |||||||||||||||||||
Sbjct: 131 ctactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtt 72
Query: 66 aatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
|||||||||| | || |||||||| || |||||||||| |||||| ||||||||||||
Sbjct: 71 aatgaatctagatat--atatgaatatgagaaatgctaaattgactttcattgtgaaacg 14
Query: 126 gagggagta 134
|||||||||
Sbjct: 13 gagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||||||||||| || | |||||||||| ||||||||||||||||||
Sbjct: 72 aacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacggagggagtag 131
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 123 bits (62), Expect = 7e-28
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 63 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 109 acttacattgtgaaacggagggagta 134
||||||||||||||||||||||||||
Sbjct: 82 acttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 68/70 (97%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 100
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 101 bits (51), Expect = 2e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctatacat 78
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 100 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 123 bits (62), Expect = 7e-28
Identities = 110/128 (85%), Gaps = 11/128 (8%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 atgaa-----------atatgaatgtgggaaatgctaaaatgacttacattgtgaaacgg 13
Query: 127 agggagta 134
||| ||||
Sbjct: 12 aggaagta 5
Score = 89.7 bits (45), Expect = 9e-18
Identities = 107/128 (83%), Gaps = 11/128 (8%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| ||||||||| |||||| ||||||||||||||| | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt----tca 60
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
| ||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||
Sbjct: 61 -------ttaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacgg 113
Query: 127 agggagta 134
||||||||
Sbjct: 114 agggagta 121
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 116/135 (85%), Gaps = 7/135 (5%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 67 atgaatctaaa-------catcaatatgaatgtggaaaatgctaaaatgacttacattgt 119
||||||||| | ||| || |||||| ||| |||||||| ||||||||||||| |
Sbjct: 79 atgaatctagacaagattcattaacatgaatatgggaaatgctagaatgacttacattat 20
Query: 120 gaaacggagggagta 134
|||||||||| ||||
Sbjct: 19 gaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 81 aacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagta 139
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 121 bits (61), Expect = 3e-27
Identities = 112/128 (87%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| ||||||||| |||||| | ||| | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| | | |||| ||||||| |||| ||||||||||||||||||| ||||||
Sbjct: 70 atgaatctagatag--atataaatgtgggaaatactaaaatgacttacattgttaaacgg 13
Query: 127 agggagta 134
||||||||
Sbjct: 12 agggagta 5
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 72 aacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 116/135 (85%), Gaps = 7/135 (5%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 67 atgaatctaaa-------catcaatatgaatgtggaaaatgctaaaatgacttacattgt 119
||||||||| | ||| || |||||| ||| |||||||| ||||||||||||| |
Sbjct: 65 atgaatctagacaagattcattaacatgaatatgggaaatgctagaatgacttacattat 124
Query: 120 gaaacggagggagta 134
|||||||||| ||||
Sbjct: 125 gaaacggaggaagta 139
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 121 bits (61), Expect = 3e-27
Identities = 67/69 (97%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 67 atgaatcta 75
|||||||||
Sbjct: 67 atgaatcta 59
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 69 aacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 127
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcat 43
|||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 119 bits (60), Expect = 1e-26
Identities = 116/133 (87%), Gaps = 5/133 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcat-tctagcatatcccacattcatattgatgtt 65
|||| ||||||||||||||| |||||| |||| ||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 66 aatgaatctaaaca----tcaatatgaatgtggaaaatgctaaaatgacttacattgtga 121
|||||||||| | | ||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 65 aatgaatctagatagatatcaatatgaatatgggaaatgctagaatgacttacattgtga 124
Query: 122 aacggagggagta 134
|||||||| ||||
Sbjct: 125 aacggaggaagta 137
Score = 101 bits (51), Expect = 2e-21
Identities = 115/133 (86%), Gaps = 5/133 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| |
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatatct 78
Query: 67 at---gaatc-taaacatcaatatgaatgtggaaaatgcta-aaatgacttacattgtga 121
|| || || | ||||||||||||||||||| ||||| || | ||||||||||||||
Sbjct: 77 atctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtga 18
Query: 122 aacggagggagta 134
|||||||||||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 119 bits (60), Expect = 1e-26
Identities = 123/148 (83%), Gaps = 17/148 (11%)
Strand = Plus / Plus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||||||||||||||| ||| |||||||||||||||| | ||||||||||||||||||
Sbjct: 3 gctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 65 taatgaatcta-----------------aacatcaatatgaatgtggaaaatgctaaaat 107
||||||||||| |||||||||||||||||| |||||||| |||
Sbjct: 63 taatgaatctatgtgacatagtttcattaacatcaatatgaatgtgagaaatgctagaat 122
Query: 108 gacttacattgtgaaacggagggagtag 135
||||||||||||||||| ||||||||||
Sbjct: 123 gacttacattgtgaaaccgagggagtag 150
Score = 111 bits (56), Expect = 3e-24
Identities = 122/148 (82%), Gaps = 17/148 (11%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| |||| |||||||||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 150 ctactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 91
Query: 66 aatgaatcta-----------------aacatcaatatgaatgtggaaaatgctaaaatg 108
|||||| ||| |||||||||||||||||||||||||||| ||||
Sbjct: 90 aatgaaactatgtcacatagattcattaacatcaatatgaatgtggaaaatgctagaatg 31
Query: 109 acttacattgtgaaacggagggagtagc 136
||||||||| ||||||||||| ||||||
Sbjct: 30 acttacattatgaaacggaggaagtagc 3
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 117 bits (59), Expect = 4e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 100
Query: 66 aatgaatctaaacat 80
|||||||||| ||||
Sbjct: 99 aatgaatctagacat 85
Score = 103 bits (52), Expect = 6e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 100 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 159
Score = 97.6 bits (49), Expect = 4e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 82 aatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtggaaaatgctataatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||||||| |||||| | ||||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 67 at 68
||
Sbjct: 65 at 66
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 117 bits (59), Expect = 4e-26
Identities = 114/132 (86%), Gaps = 4/132 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||| |||||| ||||| ||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 67 atgaatctaaacatcaata----tgaatgtggaaaatgctaaaatgacttacattgtgaa 122
|| |||||| |||| ||| ||||||||| |||| ||| ||| ||||||||||||||
Sbjct: 76 ataaatctagacatttataaatgtgaatgtgggaaatactagaataacttacattgtgaa 17
Query: 123 acggagggagta 134
||||||| ||||
Sbjct: 16 acggaggaagta 5
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| ||||
Sbjct: 78 aacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacggaggaagta 136
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 115 bits (58), Expect = 2e-25
Identities = 116/136 (85%), Gaps = 7/136 (5%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||||||||||||||| | ||||| | |||||||||||
Sbjct: 140 ctactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtt 81
Query: 66 aatgaatcta-------aacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
||| |||||| | |||||||| | |||| ||||||||||||||||||||||||
Sbjct: 80 aataaatctatatagatactatcaatataattgtgaaaaatgctaaaatgacttacattg 21
Query: 119 tgaaacggagggagta 134
||||| ||||||||||
Sbjct: 20 tgaaatggagggagta 5
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 81 aacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacggagggagtag 140
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtt 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||||||||| ||||||||||| | |||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||| |||||
Sbjct: 63 aacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaacggaggaagtag 4
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||| |||||| ||||||||| |||| |||| ||||||||||||||||||||
Sbjct: 102 catcaatataaatgtgaaaaatgctagaatggcttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||
Sbjct: 159 ctacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtt 100
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 101 bits (51), Expect = 2e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtt 63
Query: 66 aatgaatctaaacat 80
|||||||||| ||||
Sbjct: 64 aatgaatctagacat 78
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatgtgggtaatgctataatgacttacattgtgaaacggagggagtag 4
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||| ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||
Sbjct: 100 aacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 113 bits (57), Expect = 6e-25
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| ||||||||| ||||| | ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||| ||||||||||||||| || ||||| |||||||||||||||||||| |
Sbjct: 65 atga---------tcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacag 115
Query: 127 agggagtag 135
|||||||||
Sbjct: 116 agggagtag 124
Score = 105 bits (53), Expect = 2e-22
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||| |
Sbjct: 124 ctactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgatcat 65
Query: 66 aatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
| ||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 64 ta---------acatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacg 14
Query: 126 gagggagta 134
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 113 bits (57), Expect = 6e-25
Identities = 109/128 (85%), Gaps = 10/128 (7%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||||||||||||| |||||| || || ||| ||||||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
| ||||||||| ||| || |||||||||||||||||||||||||||||||
Sbjct: 62 a----------catcaatataaatatgagaaatgctaaaatgacttacattgtgaaacgg 13
Query: 127 agggagta 134
||||||||
Sbjct: 12 agggagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 105/128 (82%), Gaps = 10/128 (7%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||||||| |||||| || || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
| ||||||||| ||| || |||||||||||||||||| ||||||||||||
Sbjct: 65 a----------catcaatataaatatgagaaatgctaaaatgacttatattgtgaaacgg 114
Query: 127 agggagta 134
||| ||||
Sbjct: 115 aggaagta 122
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
|||||||||||||||||||||||||||||||||| | | | ||||||||||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtt 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||
Sbjct: 103 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||| ||||||||||||||||| | || ||||||||| ||||||||||||||| |||||
Sbjct: 63 aacattaatatgaatgtggaaaaagttagaatgacttatattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 113 bits (57), Expect = 6e-25
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| ||| |||||||||||||||| ||| |||||||||||||||||
Sbjct: 124 ctactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtt 65
Query: 66 aatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
|||||||||| | ||| |||||||||||| |||||||||||||||||||||
Sbjct: 64 aatgaatctaga---------taatatggaaaatgctagaatgacttacattgtgaaacg 14
Query: 126 gagggagta 134
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||| | |||||||| ||||||||||||| |||||||||||||||||
Sbjct: 65 aacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggagggagtag 124
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 113 bits (57), Expect = 6e-25
Identities = 108/124 (87%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||| ||||||||||||||||||||||| |||||| | || ||| | ||| ||||||
Sbjct: 5 tacttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatgtta 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| ||| ||||||||||| |||||| |||||||||||| ||||||||||||
Sbjct: 65 atgaatctagacag--atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacgg 122
Query: 127 aggg 130
||||
Sbjct: 123 aggg 126
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 95 aaaatgctaaaatgacttacattgtgaaacgga 127
||||||||||||||||||| |||||||||||||
Sbjct: 44 aaaatgctaaaatgacttatattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 12 cctccgtttcacaatataagtcattctagcatatcccacattcatat 58
||||||||||||||||||||||||| || ||| | |||||||||||
Sbjct: 125 cctccgtttcacaatataagtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 85.7 bits (43), Expect = 1e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 80 tcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| ||||||||| ||| || ||||||||| ||||||||| |
Sbjct: 159 ctactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggt 100
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||
Sbjct: 102 catcaatattaatgtgggaaattctaaaatgacttagattgtgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 113 bits (57), Expect = 6e-25
Identities = 118/141 (83%), Gaps = 13/141 (9%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| || || ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 67 atgaatctaaa-------------catcaatatgaatgtggaaaatgctaaaatgactta 113
|| |||||| | ||||||||||||||||| ||||||||||||||||||
Sbjct: 85 ataaatctagatagatctatctatcatcaatatgaatgtgggaaatgctaaaatgactta 26
Query: 114 cattgtgaaacggagggagta 134
|||||||||||||||| ||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 1e-19
Identities = 117/141 (82%), Gaps = 13/141 (9%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgata 64
Query: 67 -atgaatcta------------aacatcaatatgaatgtggaaaatgctaaaatgactta 113
|| ||||| ||||||||||| ||| || |||||||| |||||||||
Sbjct: 65 gatagatctatctagatttattaacatcaatataaatatgagaaatgctagaatgactta 124
Query: 114 cattgtgaaacggagggagta 134
|||||||||||||||||||||
Sbjct: 125 cattgtgaaacggagggagta 145
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 113 bits (57), Expect = 6e-25
Identities = 115/134 (85%), Gaps = 4/134 (2%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| ||| ||||||||||||| || ||||| ||||||||||||| |
Sbjct: 137 ctactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgct 78
Query: 66 aatgaatcta----aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtga 121
|||||||||| | ||||||||||||| || |||| ||| ||| |||||||||||||
Sbjct: 77 aatgaatctagactagcatcaatatgaatatgagaaatactagaattacttacattgtga 18
Query: 122 aacggagggagtag 135
|||||||| |||||
Sbjct: 17 aacggaggaagtag 4
Score = 95.6 bits (48), Expect = 1e-19
Identities = 114/134 (85%), Gaps = 4/134 (2%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| ||||| ||||||| || || || ||||||||||||| |
Sbjct: 4 ctacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatgct 63
Query: 66 aat---gaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtga 121
| | || || | | ||||||||||||| ||| |||| ||| ||||||||||||| |||
Sbjct: 64 agtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatga 123
Query: 122 aacggagggagtag 135
||||||||||||||
Sbjct: 124 aacggagggagtag 137
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 113 bits (57), Expect = 6e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 67 atgaatct 74
||||||||
Sbjct: 96 atgaatct 89
Score = 101 bits (51), Expect = 2e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||| || |||| |||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 98 aacatcaatataaacgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 156
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 113 bits (57), Expect = 6e-25
Identities = 111/128 (86%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| | ||| | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| | | ||||||||||| |||| ||| ||||||||||||||| ||||||
Sbjct: 70 atgaatctagatag--atatgaatgtgagaaatactagaatgacttacattgttaaacgg 13
Query: 127 agggagta 134
||||||||
Sbjct: 12 agggagta 5
Score = 73.8 bits (37), Expect = 5e-13
Identities = 106/128 (82%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||| ||||| ||||||||||||| || || ||||||||||| || |
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatatctatctag 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|| || ||||||||||| | ||| ||||||||| ||||||||||||||||||||||
Sbjct: 65 attcatt--aacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacgg 122
Query: 127 agggagta 134
||| ||||
Sbjct: 123 aggaagta 130
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 113 bits (57), Expect = 6e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||| |
Sbjct: 153 ctactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgct 94
Query: 66 aatgaatctaaacat 80
|||||||||| ||||
Sbjct: 93 aatgaatctagacat 79
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 101 bits (51), Expect = 2e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtt 100
Query: 66 aatgaat 72
|||||||
Sbjct: 99 aatgaat 93
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||||| |||| || ||||||||||||||||||||||||| |||||
Sbjct: 100 aacatcaatatgaatgtgggaaatattagaatgacttacattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 4 tgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||||
Sbjct: 2 tgctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatg 61
Query: 64 ttaatgaatctaaacat 80
|||||||||||| ||||
Sbjct: 62 ttaatgaatctagacat 78
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 63 aacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Query: 136 ca 137
||
Sbjct: 3 ca 2
Score = 95.6 bits (48), Expect = 1e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 103 atcaatatgaatgtggaaaatgttagaatgacttacattgtgaaacggagggagta 158
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||| ||| | |||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 67 atgaatctaaa 77
|||||||||||
Sbjct: 98 atgaatctaaa 88
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaat 72
|||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 73 ctaaacat 80
||||||||
Sbjct: 71 ctaaacat 78
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||
Sbjct: 63 aacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggagagagtag 4
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 111 bits (56), Expect = 3e-24
Identities = 113/131 (86%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||| | ||||||||| ||||||||||||| ||||||
Sbjct: 135 ctacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtt 76
Query: 66 aatgaatctaaac--atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaa 123
||| |||||| || ||| ||||||||||| | ||||||| || | |||||| | |||||
Sbjct: 75 aataaatctagacatatctatatgaatgtgaacaatgctagaaagtcttacaatatgaaa 16
Query: 124 cggagggagta 134
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| |||||||||||| ||||||| || | |||||||||||||||||||| |||||
Sbjct: 76 aacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagtag 135
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 130 ctacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 71
Query: 66 aatgaatctaaacat 80
|||| ||||| ||||
Sbjct: 70 aatggatctagacat 56
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||
Sbjct: 71 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagtag 130
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||
Sbjct: 115 ctacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtt 56
Query: 66 aatgaat 72
|||||||
Sbjct: 55 aatgaat 49
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||| | |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 56 aacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaagtag 115
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcat 56
|||| ||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 100 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| || ||||||||||||| |||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| ||||||||||||| ||||||| |||||| |||||||||||||||||| ||||
Sbjct: 61 catctatatgaatgtggacaatgctagaatgacatacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||||||
Sbjct: 163 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 104
Query: 66 aatgaatctaaacat 80
|||||||||| ||||
Sbjct: 103 aatgaatctagacat 89
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 104 aacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 163
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/73 (87%), Gaps = 4/73 (5%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatat----tgat 62
|||||||||||||||||||| |||||||||||||||| || || ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 63 gttaatgaatcta 75
|||||||||||||
Sbjct: 65 gttaatgaatcta 77
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 96 aaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||| ||||||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 67 atgaatctaaacatc 81
||||||||| |||||
Sbjct: 65 atgaatctagacatc 79
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| ||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtc 94
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 93 aatgaatcta 84
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 107 bits (54), Expect = 4e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 63 aacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtag 4
Query: 136 ca 137
||
Sbjct: 3 ca 2
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 4 tgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
||||||| ||||||||||||||| |||||||||||||||| | |||||||||||| ||||
Sbjct: 2 tgctactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatg 61
Query: 64 ttaatga 70
|||||||
Sbjct: 62 ttaatga 68
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 77 acatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 107 bits (54), Expect = 4e-23
Identities = 115/136 (84%), Gaps = 7/136 (5%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||||||||||||||||| || || | ||| ||||| ||||
Sbjct: 140 ctacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtt 81
Query: 66 aatgaatctaaacatcaa-------tatgaatgtggaaaatgctaaaatgacttacattg 118
|||||||||| |||| | |||||||||||||||| ||| ||||||||||||||
Sbjct: 80 aatgaatctagacatataataactctatgaatgtggaaaatactagaatgacttacattg 21
Query: 119 tgaaacggagggagta 134
||||||||||| ||||
Sbjct: 20 tgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcata 57
|||||||||||||||||||| ||||||||||||| || | |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 96 aaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||| ||| ||||||||| ||||||||||||||| |||||
Sbjct: 101 aaatcctagaatgacttatattgtgaaacggaggaagtag 140
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 107 bits (54), Expect = 4e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 94 aacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggagggagtag 153
Query: 136 ca 137
||
Sbjct: 154 ca 155
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 77 acatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 4 tgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
||||||| ||||||||||||||| |||||||||||||| | | |||||||||||||||||
Sbjct: 155 tgctactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatg 96
Query: 64 ttaatga 70
|||||||
Sbjct: 95 ttaatga 89
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 107 bits (54), Expect = 4e-23
Identities = 111/128 (86%), Gaps = 4/128 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||||||||||||||||| || || || ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||||||| | || |||| ||||| |||||||| ||||||||||||| ||||||||
Sbjct: 65 atgaatct--agatagatatatatgtg--aaatgctacaatgacttacattatgaaacgg 120
Query: 127 agggagta 134
||||||||
Sbjct: 121 agggagta 128
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||| ||| || |||| ||| ||||||||| ||||||||||||||| ||||
Sbjct: 61 catcaatataaatatgagaaatactagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 89 atgaatctagacat 76
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 91 aacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 107 bits (54), Expect = 4e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtt 63
Query: 66 aatgaa 71
||||||
Sbjct: 64 aatgaa 69
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||||| |||||||| |||||||| |||||||||||||||| |||||
Sbjct: 63 aacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggaggaagtag 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 aatgacttacattgtgaaacggagggagtag 135
|||||||| |||||||||||| |||||||||
Sbjct: 71 aatgacttgcattgtgaaacgaagggagtag 101
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||| |||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 96 atgaatctagacat 83
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||
Sbjct: 98 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacggagggagta 156
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||| |||||| |||||||||||||||| | | ||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 67 atgaat 72
||||||
Sbjct: 65 atgaat 70
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||||| |||||||||| |||||||||||||||| |||||||| ||||
Sbjct: 63 aacatcaatatgaatgtagaaaatgctagaatgacttacattgtggaacggaggaagta 5
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 105 bits (53), Expect = 2e-22
Identities = 112/129 (86%), Gaps = 7/129 (5%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||| |||||||||| | ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatac-- 62
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||| | || |||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 63 atga-tgta----tcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgg 117
Query: 127 agggagtag 135
|||||||||
Sbjct: 118 agggagtag 126
Score = 99.6 bits (50), Expect = 1e-20
Identities = 110/129 (85%), Gaps = 7/129 (5%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| ||||| |||||||||| | ||||||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatac- 68
Query: 66 aatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
||| | ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 67 -----atc-atgtatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 126 gagggagta 134
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 63 aacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 14 tccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatc 73
||||||||| ||| |||||||||| | ||| ||||||||||||||||||| |||||||||
Sbjct: 151 tccgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatc 92
Query: 74 taaacat 80
|| ||||
Sbjct: 91 tagacat 85
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||| ||||| | ||||||||||||| ||||||||| |||||||
Sbjct: 102 catcaatatgaatgtgggaaatggtggaatgacttacattatgaaacggaaggagtag 159
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 105 bits (53), Expect = 2e-22
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||| |||||| ||| ||| |||||||||||| ||||||| ||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| || || ||||| || ||| ||||||| ||||||||||||| ||||||||
Sbjct: 72 atgaatctagacgtctatatgcatatgggtaatgctagaatgacttacattatgaaacgg 13
Query: 127 agggagtag 135
||| |||||
Sbjct: 12 aggaagtag 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 108/130 (83%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| ||| |||||||||||||||| |||| || ||||| || ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattacccatatgcatatagacgtc 63
Query: 66 aatgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
| || || | |||||| ||||| |||||| ||||||| ||||| ||||||| ||||||
Sbjct: 64 ta-gattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaac 122
Query: 125 ggagggagta 134
|||||||||
Sbjct: 123 agagggagta 132
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||| ||||| | ||||||||||||| |||||||||||||||||
Sbjct: 99 catcaatatgaatgtgggaaatggtggaatgacttacattatgaaacggagggagtag 156
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| |||| ||| ||||||||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
||||| ||||||||||| ||| |||||||||| | ||| |||||||||||||||||||
Sbjct: 156 ctactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatg 99
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 105 bits (53), Expect = 2e-22
Identities = 111/131 (84%), Gaps = 12/131 (9%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| || ||| |||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttctcac---------gatgtta 76
Query: 67 atgaatcta---aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaa 123
||||||||| ||||||||| ||||||||| |||||||| ||| ||||| |||||||||
Sbjct: 75 atgaatctatataacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaa 16
Query: 124 cggagggagta 134
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 67 atgaatcta 75
|||||||||
Sbjct: 55 atgaatcta 47
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| |||||||| ||||||||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 4 tgctacttcctccgtttcacaatataagtcattctagcatat 45
||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 2 tgctactccctccgtttcacaatgtaagtcattctagcatat 43
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||| | ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 103 bits (52), Expect = 6e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||||| || |||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 67 atgaatctaaacatcaatat 86
|||||| || ||||| ||||
Sbjct: 98 atgaatatagacatctatat 79
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 100 aacatcaatatgaatgcggaatatgctagaatgacttacattgtgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| | | |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 63 aacatcaatatgaatataggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 4 tgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
||||||| ||||||||||||||| |||||||||||| ||| | |||||||||||||||||
Sbjct: 161 tgctactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatg 102
Query: 64 ttaatgaatctaaacat 80
||||||||||| ||||
Sbjct: 101 ctaatgaatctagacat 85
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtagca 137
||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 102 catcaatatgaatgtggtaaatgttagaatgacttacattgtgaaacggagggagtagca 161
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 105 bits (53), Expect = 2e-22
Identities = 108/129 (83%), Gaps = 18/129 (13%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 115 ctacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga---- 60
Query: 66 aatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
|||||||||||||||| |||||||| ||||||||| |||||||||||
Sbjct: 59 -------------atcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacg 14
Query: 126 gagggagta 134
|||||||||
Sbjct: 13 gagggagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 105/129 (81%), Gaps = 18/129 (13%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcat-ttccacattcatattgat---- 59
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||||||||| |||||||| ||||||||| ||||||||||||
Sbjct: 60 -------------tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgg 106
Query: 127 agggagtag 135
||| |||||
Sbjct: 107 aggaagtag 115
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| | |||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||||||||||| || |||||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 63 aacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| |||||||||||||| |||| ||| ||||||||||||||||||||||||||||||
Sbjct: 100 aacaacaatatgaatgtgggaaatactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 6e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 4 tgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
||||||| ||||||| ||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 161 tgctactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgata 102
Query: 64 ttaatgaatcta 75
||||||||||||
Sbjct: 101 ttaatgaatcta 90
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| ||||||||| | |||| ||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtagca 137
|||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 103 atcaatatgaatgtgggaaatgctagaatgacttacattgtgatacggagggagtagca 161
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||| ||||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct: 63 aacatcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 103 bits (52), Expect = 6e-22
Identities = 109/128 (85%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||| |||||| ||| |||| | ||||||||| |||||||||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| ||||| ||||||||||||| ||||||| || | |||||||| ||||| ||
Sbjct: 72 atgaatctagacatctatatgaatgtggacaatgctagaaagtcttacattatgaaaagg 13
Query: 127 agggagta 134
||| ||||
Sbjct: 12 aggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 107/129 (82%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||| ||||| ||| |||| | ||||||||| |||||||||||| |||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgtct 64
Query: 67 atgaatc-taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
| || || | |||||| ||||||||||||| ||||||| || | |||||||| ||||||
Sbjct: 65 a-gattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaaca 123
Query: 126 gagggagta 134
|||||||||
Sbjct: 124 gagggagta 132
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 101 bits (51), Expect = 2e-21
Identities = 117/142 (82%), Gaps = 14/142 (9%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||| |||||||||| | |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 67 atgaatctaaa--------------catcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||| | ||||||||| ||||| |||||||||||||||| ||
Sbjct: 65 atgaatctagatctaaattcattagcatcaatataaatgtagaaaatgctaaaatgattt 124
Query: 113 acattgtgaaacggagggagta 134
||||||||||||||||||||||
Sbjct: 125 acattgtgaaacggagggagta 146
Score = 89.7 bits (45), Expect = 9e-18
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgaaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 2e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||||||||| ||||| ||||| |||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 66 aatgaatctaaacat 80
|||||||||| ||||
Sbjct: 64 aatgaatctagacat 78
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagtag 4
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/61 (93%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 100 aacatcaatataaatgtg--aaatgctagaatgacttacattgtgaaacggagggagtag 157
Query: 136 c 136
|
Sbjct: 158 c 158
Score = 79.8 bits (40), Expect = 9e-15
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||| ||||||||||||||| |||||||||||||||| | |||||| ||||||||||
Sbjct: 158 gctactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgt 101
Query: 65 taatgaatcta 75
|||| ||||||
Sbjct: 100 taataaatcta 90
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||| ||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtt 63
Query: 66 aatgaatctaaacat 80
|||||||||| ||||
Sbjct: 64 aatgaatctagacat 78
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||| ||||||||||||||||||||||| | ||||||||||||||| |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 67 atgaatctaaa 77
|||||||||||
Sbjct: 98 atgaatctaaa 88
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||| |||||| ||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 63 aacaccaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||
Sbjct: 103 atcaatatgaatgtgaaaaatgctagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 101 bits (51), Expect = 2e-21
Identities = 114/133 (85%), Gaps = 4/133 (3%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| |||||||||||||||||||| | ||||||||| ||||||| ||||| ||||||
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 78
Query: 66 aatgaatctaaac--atcaatatg--aatgtggaaaatgctaaaatgacttacattgtga 121
||||||||||||| || ||||| |||||||| ||||| |||| | |||| |||||||
Sbjct: 77 aatgaatctaaacatatgtatatgttaatgtggacaatgccaaaaagtcttatattgtga 18
Query: 122 aacggagggagta 134
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| ||||| |||||| ||||||| || | |||| |||||||||||||||||||||
Sbjct: 78 aacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggagggagtag 137
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataag 31
|||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataag 29
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 101 bits (51), Expect = 2e-21
Identities = 110/129 (85%), Gaps = 7/129 (5%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| ||||| |||||||||| | ||||||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgatac- 68
Query: 66 aatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
||| | ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 67 -----atc-atgtatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 126 gagggagta 134
|||||||||
Sbjct: 13 gagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 111/129 (86%), Gaps = 7/129 (5%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||| |||||||||| | ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatac-- 62
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||| | || ||||||||||||||| |||||||| ||| ||||||||||||||||||
Sbjct: 63 atga-tgta----tcaatatgaatgtggnaaatgctagaataacttacattgtgaaacgg 117
Query: 127 agggagtag 135
|||||||||
Sbjct: 118 agggagtag 126
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 101 bits (51), Expect = 2e-21
Identities = 114/133 (85%), Gaps = 4/133 (3%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| |||||||||||||||||||| | ||||||||| ||||||| ||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 63
Query: 66 aatgaatctaaac--atcaatatg--aatgtggaaaatgctaaaatgacttacattgtga 121
||||||||||||| || ||||| |||||||| ||||| |||| | |||| |||||||
Sbjct: 64 aatgaatctaaacatatgtatatgttaatgtggacaatgccaaaaagtcttatattgtga 123
Query: 122 aacggagggagta 134
|||||||| ||||
Sbjct: 124 aacggaggaagta 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| ||||| |||||| ||||||| || | |||| |||||||||||||||||||||
Sbjct: 63 aacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggagggagtag 4
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataag 31
|||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataag 112
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 2e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||||||||| ||||| ||||| |||||||||||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 66 aatgaatctaaacat 80
|||||||||| ||||
Sbjct: 97 aatgaatctagacat 83
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 98 aacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagtag 157
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/61 (93%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 aacatcaatataaatgtg--aaatgctagaatgacttacattgtgaaacggagggagtag 4
Query: 136 c 136
|
Sbjct: 3 c 3
Score = 79.8 bits (40), Expect = 9e-15
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||| ||||||||||||||| |||||||||||||||| | |||||| ||||||||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgt 60
Query: 65 taatgaatcta 75
|||| ||||||
Sbjct: 61 taataaatcta 71
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 67 atgaatctaaa 77
|||||||||||
Sbjct: 98 atgaatctaaa 88
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 100 aacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||| | ||||||||| || ||| || ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 67 atgaatctaaacatcaatat 86
||||||||| ||||| ||||
Sbjct: 65 atgaatctagacatctatat 84
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 63 aacatctatatgaatgtgagaaatgataaaatgacttacaatgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 101 bits (51), Expect = 2e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| ||||||||| ||| || | ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 67 at 68
||
Sbjct: 65 at 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 105 aatgacttacattgtgaaacggagggagta 134
|||| |||||||||||||||||||||||||
Sbjct: 81 aatggcttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 77 acatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtagc 136
||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagtagc 3
Query: 137 aa 138
||
Sbjct: 2 aa 1
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 80 tcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||| ||||| ||| ||||||||||||| ||||| ||||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 3 ttgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgat 62
|||||||| ||||||||||||||| ||||||||| ||| || | |||||||||||||||
Sbjct: 1 ttgctactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgat 60
Query: 63 gt 64
||
Sbjct: 61 gt 62
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||||||||||||||| |||| ||||||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 67 atgaat 72
||||||
Sbjct: 65 atgaat 70
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 84 tatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 106 tatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagggagta 156
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | |||||||||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 67 atgaatcta 75
|||||||||
Sbjct: 96 atgaatcta 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 84 tatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||| |||||| | ||||||||| ||||||||||||||| ||||
Sbjct: 55 tatgaatgtgggaaatgccagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||| ||| |||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| || ||||||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 83 atatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 107 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||| ||| |||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 103 atcaatatgaatgtgaaaaatactagaatgacttacattgtgaaacggagggagta 158
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||||||||||| || | ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| || |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| |||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 100 aacattaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||| ||| ||||||| ||||||||||||||||||||||||| ||||
Sbjct: 63 aacatccatatgaatatgggtaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||
Sbjct: 152 ctacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtt 93
Query: 66 aatgaa 71
||||||
Sbjct: 92 aatgaa 87
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 67 atgaa 71
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 99.6 bits (50), Expect = 1e-20
Identities = 108/130 (83%), Gaps = 18/130 (13%)
Strand = Plus / Minus
Query: 6 ctacttcctccgttt-cacaatataagtcattctagcatatcccacattcatattgatgt 64
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 117 ctacttcctccgttttcacaatataagtcattctagcatttcccacattcatattga--- 61
Query: 65 taatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 124
|||||||||||||||| |||||||| ||||||||| ||||||||||
Sbjct: 60 --------------atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaac 15
Query: 125 ggagggagta 134
||||||||||
Sbjct: 14 ggagggagta 5
Score = 95.6 bits (48), Expect = 1e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgat 62
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 109/129 (84%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||| |||||| | |||||| | ||||||||| ||||||||||||| |||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||||||| || ||||||||| ||||||| || | |||| | | ||||||||
Sbjct: 72 atgaatctaaacacacatgtgaatgtgggcaatgctagaaagtcttataatatgaaacgg 13
Query: 127 agggagtag 135
|||||||||
Sbjct: 12 agggagtag 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattca 55
||||| ||||||||||| | |||||| | ||||||||| ||||||||||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgcccacattca 53
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 102 catctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | |||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 67 atgaatctaaacat 80
|||||| |||||||
Sbjct: 98 atgaatttaaacat 85
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| |||||||| | ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 61 catctatatgaatatagaaaatgttagaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||| ||| | | | |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| ||||||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtagc 136
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 catcaatatggatgtgagaaatgctaaaatgacttacattgtgaaacggagggagtagc 160
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||| ||||||||||||||| ||||||||| |||||| || ||||| ||||||||||
Sbjct: 160 gctactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgc 101
Query: 65 taatgaatctaaacat 80
||||||||||| ||||
Sbjct: 100 taatgaatctagacat 85
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 84 tatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 55 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| | |||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 67 atgaatcta 75
|||| ||||
Sbjct: 65 atgactcta 73
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 63 aacatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 6e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| |||||||||||||||||||||||||||||||| | | | ||||||||||||| |
Sbjct: 159 ctactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgct 100
Query: 66 aatgaatctaaacat 80
|||||||||| ||||
Sbjct: 99 aatgaatctagacat 85
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||| | |||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 102 catcaatatgaatatagaaaatgctagaatgacttatattgtgaaacggagggagtag 159
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 12 cctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaa 71
||||||||||||||| |||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 72 tctaaacat 80
|||| ||||
Sbjct: 93 tctagacat 85
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 77 acatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtagc 136
||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 101 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagggattagc 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 12 cctccgtttcacaatataagtcattctagcatatcccacattcatattga 61
||||||||||||||| |||||||||||||||| || ||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattga 59
Score = 73.8 bits (37), Expect = 5e-13
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 80 tcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggga 131
|||||||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 96 catcaatataaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 152
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||||||||||||| |||||| | ||||||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 67 atgaatcta 75
|||||||||
Sbjct: 92 atgaatcta 84
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||| | |||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 catcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 97.6 bits (49), Expect = 4e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatatt 59
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 95.6 bits (48), Expect = 1e-19
Identities = 102/121 (84%), Gaps = 13/121 (10%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatc 73
|||||||||||||||||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattg------atgaatc 65
Query: 74 taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagt 133
| ||||||||||||| |||||||| ||||||||| ||||||||||||||| |||
Sbjct: 66 t-------aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagt 118
Query: 134 a 134
|
Sbjct: 119 a 119
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 97.6 bits (49), Expect = 4e-20
Identities = 107/125 (85%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||| ||| | ||| |||||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||| ||| |||||||| || ||||| || ||||||||| ||||||||||||
Sbjct: 71 atgaatctagttatc-atatgaatttgagaaatgatagaatgacttatattgtgaaacgg 13
Query: 127 aggga 131
|||||
Sbjct: 12 aggga 8
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||| ||| |||||| || ||||||||||||||||||||||||||||||
Sbjct: 75 catcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacggagggagta 131
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||||| |||| |||||||||||||||| || |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||||||||||| ||| ||||| ||| ||||| |||||
Sbjct: 158 ctactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtt 99
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 98 aatgaatcta 89
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| |||||||| |||||||||||||| |||||||||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgcgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||| ||||| ||| ||| ||||| || |||||||||||||||||||||||||||||||
Sbjct: 99 aacattaatataaatatgggaaatgttagaatgacttacattgtgaaacggagggagtag 158
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 97.6 bits (49), Expect = 4e-20
Identities = 117/143 (81%), Gaps = 15/143 (10%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||||||| ||| || || |||||||||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 67 atgaatcta---------------aacatcaatatgaatgtggaaaatgctaaaatgact 111
||||||||| ||||||||||| |||||| |||| |||||||||||
Sbjct: 87 atgaatctagacaacattaatattaacatcaatataaatgtgacaaatactaaaatgact 28
Query: 112 tacattgtgaaacggagggagta 134
||||||||||||| |||||||||
Sbjct: 27 tacattgtgaaacagagggagta 5
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 89 aacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacggagggagta 147
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 10 ttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatg 69
||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 70 aatct 74
|||||
Sbjct: 68 aatct 72
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 3 ttgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgat 62
|||||||| ||||||||||||||||||||||||||||| || ||||||||| ||| |||
Sbjct: 160 ttgctactccctccgtttcacaatataagtcattctaggattgcccacattcttatagat 101
Query: 63 gttaatgaatcta 75
|||||||||||
Sbjct: 100 actaatgaatcta 88
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 87 gaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtagcaa 138
|||||||| ||| ||| ||||||||| ||||||||||||||||||||||||
Sbjct: 109 gaatgtgggcaatcctagaatgacttatattgtgaaacggagggagtagcaa 160
Score = 60.0 bits (30), Expect = 8e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagg 129
|||||| |||||||||||| ||||||| ||||||||| ||| |||||||||||
Sbjct: 63 aacatctatatgaatgtgggcaatgctagaatgacttatattatgaaacggagg 10
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 100 aacattaatatgaatgtggagaatgctagaatgacttacattgtgaaacggagggagtag 159
Score = 93.7 bits (47), Expect = 6e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtt 100
Query: 66 aatgaatctaaacat 80
|||||||||| ||||
Sbjct: 99 aatgaatctagacat 85
Score = 89.7 bits (45), Expect = 9e-18
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 82 aatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
Score = 89.7 bits (45), Expect = 9e-18
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 74 taaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagt 133
||||||||||||| ||||||| |||||| |||||||||||| ||||||||||||||||||
Sbjct: 65 taaacatcaatataaatgtgggaaatgcaaaaatgacttactttgtgaaacggagggagt 6
Query: 134 a 134
|
Sbjct: 5 a 5
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||
Sbjct: 100 aacatcaatataaatgtgggaaatgctaaaatgacttactttgtgaaacggaggaagta 158
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||||| ||||||||| | |||| ||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| ||||||||| |||||| |||||||||||| | ||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtt 63
Query: 66 aatgaatc 73
||||||||
Sbjct: 64 aatgaatc 71
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| | |||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 63 aacatctacatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtag 4
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||||||||| |||||||||||||||||| |||| ||||||||||||||||
Sbjct: 98 aacatctatatgaatgtgaaaaatgctaaaatgacttgcattatgaaacggagggagta 156
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||||||| |||||| | ||||||||||| |||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 67 atgaatcta 75
|||||||||
Sbjct: 96 atgaatcta 88
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 5 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||||| |||||||| ||||||||||||||||||| ||| || || |||||||||||||
Sbjct: 160 gctactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgc 101
Query: 65 taatgaatctaaacat 80
||||||||||||||||
Sbjct: 100 taatgaatctaaacat 85
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
|||||||||||||| |||| ||||||||||||||| || | ||| ||||||||||||| |
Sbjct: 4 ctacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgct 63
Query: 66 aatgaat 72
|||||||
Sbjct: 64 aatgaat 70
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtagc 136
||||||||||||| || ||||| || ||||||||| |||||| |||||||||||||||
Sbjct: 102 catcaatatgaatatgagaaatgttagaatgacttatattgtggaacggagggagtagc 160
Score = 60.0 bits (30), Expect = 8e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||| |||||||| ||| ||||||||| | |||| |||||||| |||||
Sbjct: 61 catcaatatgaatatggaaaatactagaatgacttatactgtggaacggaggaagtag 4
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 95.6 bits (48), Expect = 1e-19
Identities = 114/137 (83%), Gaps = 8/137 (5%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||| | ||||||||| |||||||||||| ||||||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtt 82
Query: 66 aatgaatctaaaca--------tcaatatgaatgtggaaaatgctaaaatgacttacatt 117
||| |||||| ||| || |||||||| |||| |||||||||| | ||||||||
Sbjct: 81 aataaatctagacacacatacatctatatgaatatggataatgctaaaaagtcttacatt 22
Query: 118 gtgaaacggagggagta 134
|||||||||||||||||
Sbjct: 21 gtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| ||||||||||||| ||||||| || | ||||||||||||||||||||||||||
Sbjct: 82 aacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacggagggagtag 141
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | |||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 67 atgaatctaaacatcaatat 86
||||||||| ||||| ||||
Sbjct: 98 atgaatctagacatctatat 79
Score = 95.6 bits (48), Expect = 1e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 83 atatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 107 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatc 73
|||||| || ||| |||||||||||| ||| |||||||||||||| | ||||||||||||
Sbjct: 12 tccgttccataatgtaagtcattctaacatttcccacattcatataggtgttaatgaatc 71
Query: 74 ta 75
||
Sbjct: 72 ta 73
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 83 atatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||||||||| ||||| || ||||||||||||| || |||||| |||||||
Sbjct: 56 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagtag 4
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 99 aacatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacggagggagta 157
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||| || | ||||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 97 atgaatctagacat 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||| ||||| ||||| ||||||| | |||||||||||||||||| |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagttt-tcccacattcatattgatatta 63
Query: 67 atgaatcta 75
|||||||||
Sbjct: 64 atgaatcta 72
Score = 56.0 bits (28), Expect = 1e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| ||| ||| ||| ||||||||||| ||||||||||||||
Sbjct: 59 atcaatatgaatgtgggaaaa-ctagaataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 93.7 bits (47), Expect = 6e-19
Identities = 115/140 (82%), Gaps = 12/140 (8%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||| |||||| ||| ||||||||||||| || ||||||||||||| ||||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 67 atgaatcta------------aacatcaatatgaatgtggaaaatgctaaaatgacttac 114
|| |||||| ||||||| |||||||||| ||||||||| ||||||||||
Sbjct: 84 ataaatctagatatatatattaacatcactatgaatgtgaaaaatgctagaatgacttac 25
Query: 115 attgtgaaacggagggagta 134
||| ||||||||||| ||||
Sbjct: 24 attatgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 113/140 (80%), Gaps = 12/140 (8%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| |||||||||||||||| | |||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 67 atgaatcta------------aacatcaatatgaatgtggaaaatgctaaaatgacttac 114
|| || || ||||||| ||||||||||| |||| ||| ||||||||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 115 attgtgaaacggagggagta 134
||| |||||| |||||||||
Sbjct: 125 attatgaaacagagggagta 144
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 77 acatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 98 atgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| | |||||||||||||||||||||||||||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagtag 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatat 45
||||| ||||||||||||||| ||||||| ||||||||||
Sbjct: 112 ctactccctccgtttcacaatgtaagtcaatctagcatat 73
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| |||||| ||||||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| ||||||| || |||||||||| ||||||||||| ||||
Sbjct: 63 aacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| |||||||| || |||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| |||| ||| |||| |||||||||||||||||||||||||
Sbjct: 103 atcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacggagggagta 158
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 94 gaaaatgctaaaatgacttacattgtgaaacggagggagtagc 136
|||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 45 gaaaatactagaatgacttacattgtgaaacggagggagtagc 3
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 5 gctacttcctccgtttcacaatataagtcattctag 40
|||||| ||||||||||||||| |||||||||||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
||||| ||||||||||||||| |||||||||||||||| |||||| ||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 90 tgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||| |||||||| ||||| ||||||||| ||||||||||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagggagta 107
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccaca 51
|||| ||||||||| ||||| ||| |||||||||||| |||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 14 tccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatc 73
||||||||||||| |||||||||||| ||| || ||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 74 ta 75
||
Sbjct: 72 ta 73
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||| |||||| | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 103 atcaacatgaatttagaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 63 aacatcaatatgaatgtgagaaatggtagaatgacttacattgtgaaacggaaggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||||||||||||||| | | | |||||| ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||||||||||||||| || || ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| || |||||||| ||||||||||||| ||||||||||||||||
Sbjct: 63 aacatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcata 57
|||||||||||||| ||||| |||||||||||||||| |||||||||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcata 95
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| |||||| ||||||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| ||||||| || |||||||||| ||||||||||| ||||
Sbjct: 63 aacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 97 aatgctaaaatgacttacattgtgaaacggagggagta 134
||||||| || | |||||||| ||||||||||||||||
Sbjct: 119 aatgctacaaagtcttacattatgaaacggagggagta 156
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 61 catcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||||||||||||||| | |||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||| ||||| | ||| || ||||||||||||| ||||||||||||||||
Sbjct: 102 catcaatatggatgtgaacaatagtagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 89.7 bits (45), Expect = 9e-18
Identities = 108/129 (83%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||| |||||| | |||||| | ||||||||| ||||||||||||| |||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
||||||||||||| | ||||||||| ||||||| || | |||| | | ||||||||
Sbjct: 72 atgaatctaaacacacacgtgaatgtgggcaatgctagaaagtcttataatatgaaacgg 13
Query: 127 agggagtag 135
|||||||||
Sbjct: 12 agggagtag 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattca 55
||||| ||||||||||| | |||||| | ||||||||| ||||||||||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgcccacattca 53
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 89.7 bits (45), Expect = 9e-18
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 90 catcaatatgaatgtagaaaatgctagaatgatttacattgtgaaacggagggagta 146
Score = 77.8 bits (39), Expect = 4e-14
Identities = 114/142 (80%), Gaps = 14/142 (9%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||| |||||||||||| | | ||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 67 atgaatcta--------------aacatcaatatgaatgtggaaaatgctaaaatgactt 112
|||||| || | ||||||||| ||| || ||||| ||| ||||||||
Sbjct: 86 atgaatttagatctagattcattagcatcaatataaatatgaaaaatactagaatgactt 27
Query: 113 acattgtgaaacggagggagta 134
||||||||||||||||||||||
Sbjct: 26 acattgtgaaacggagggagta 5
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 61 catcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||||||||||||||| | |||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| ||||| ||||| ||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 102 catcgatatggatgtgaaaaatactagaatgacttacattatgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| ||||||||||||| || | ||||| ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 89.7 bits (45), Expect = 9e-18
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 29 aagtcattctagcatatcccacattcatattgatgttaatgaatctaaa 77
||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaa 62
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 29 aagtcattctagcatatcccacattcatattgatgttaatgaatctaaacat 80
||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacat 52
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||||||||||||| |||||||| ||||||||
Sbjct: 37 aacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||||||||||||| |||||||| ||||||||
Sbjct: 74 aacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 87.7 bits (44), Expect = 4e-17
Identities = 108/129 (83%), Gaps = 4/129 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||| ||||||| |||||||||||||||| ||| || |||||| |||| || |||
Sbjct: 5 tacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaatta 64
Query: 67 atgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||||||| | || || |||||| |||||||| ||||||||||||| ||||||||
Sbjct: 65 gtgaatctagatat----atagatgtgggaaatgctagaatgacttacattatgaaacgg 120
Query: 127 agggagtag 135
|||||||||
Sbjct: 121 agggagtag 129
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacat 52
||||| ||||||||||| ||| |||||||||||||||| ||||||||
Sbjct: 129 ctactccctccgtttcataatgtaagtcattctagcatttcccacat 83
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 29 aagtcattctagcatatcccacattcatattgatgttaatgaatctaaacat 80
||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacat 59
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 29 aagtcattctagcatatcccacattcatattgatgttaatgaatcta 75
||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatcta 47
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||||||||||||| |||||||| ||||||||
Sbjct: 74 aacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgactt 112
|||||||||||||||||| |||||||| ||||||||
Sbjct: 37 aacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||| |||||||||||||||||||||| || |||||| |||||||||| |
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgtaa 34
Query: 67 atga 70
||||
Sbjct: 33 atga 30
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 ctccgtttcacaatataagtcatt 36
||||||||||||||||||||||||
Sbjct: 11 ctccgtttcacaatataagtcatt 34
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 104 aaatgacttacattgtgaaacggagggagta 134
|||||||||| |||||||||||||| |||||
Sbjct: 35 aaatgacttatattgtgaaacggagagagta 5
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 87.7 bits (44), Expect = 4e-17
Identities = 111/133 (83%), Gaps = 4/133 (3%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| ||| |||||||||||| || |||| || ||||| ||| ||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatt 63
Query: 66 aatgaatctaaac----atcaatatgaatgtggaaaatgctaaaatgacttacattgtga 121
|||||||||| || ||| |||||||||| || ||||||| ||||||||||||| |||
Sbjct: 64 aatgaatctagacttatatctatatgaatgtagacaatgctagaatgacttacattatga 123
Query: 122 aacggagggagta 134
|||||||| ||||
Sbjct: 124 aacggaggaagta 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcat 43
|||||||||||||||| ||| ||||||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcat 100
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 105 aatgacttacattgtgaaacggagggagtag 135
||||||||||||| |||||||||||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcata 57
||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 96 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 84 tatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||| |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtag 96
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 96 aaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||| |||||||||||||||||||| |||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcat 43
|||| |||| |||||||||| ||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 87.7 bits (44), Expect = 4e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 55 atattgatgttaatgaatctaaacatcaatatgaatgtggaaaatgctaaaatgacttac 114
|||||||||||||||||| ||| ||||||||| ||| |||||||||||| |||||||||
Sbjct: 61 atattgatgttaatgaat-taagcatcaatataaatatggaaaatgctagaatgacttat 119
Query: 115 attgtgaaacggagggagta 134
||| ||||| ||||||||||
Sbjct: 120 attatgaaatggagggagta 139
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 89 atgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 50 atgtggaaaatactagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||||||||||||||| || |||||| ||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtt 63
Query: 66 aatg 69
||||
Sbjct: 64 aatg 67
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||| ||||| |||||| |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 63 aacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 97 aatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||| |||||||||||||||| |||||| |||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagtag 102
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 14 tccgtttcacaatataagtcattctagcat 43
|||||| |||||| ||||||||||||||||
Sbjct: 94 tccgttccacaatgtaagtcattctagcat 65
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 85.7 bits (43), Expect = 1e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 88 aatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 73.8 bits (37), Expect = 5e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 87 gaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||| |||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagtag 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacatt 53
|||| ||||||||||||||| |||||||||||||||| | |||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcat 43
||||| ||||||||||||||| |||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgcaagtcattctagcat 41
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| ||| |||||||||||||||| ||||||| ||||| ||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtt 63
Query: 66 aatgaat 72
|||||||
Sbjct: 64 aatgaat 70
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||||||||||||||| |||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||| ||| ||||||| ||||||||||||| ||||||||||||||||
Sbjct: 100 aacatctatatgaatatgggtaatgctagaatgacttacattatgaaacggagggagta 158
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| ||||| |||||| ||||||| ||||||||||||| ||||||||||| |||||
Sbjct: 63 aacatctatatgtatgtgggcaatgctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||| | |||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 63 aacatcaatataattgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| ||||| |||||||||| | ||||| | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 60.0 bits (30), Expect = 8e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 106 atgacttacattgtgaaacggagggagtag 135
||||||||||||||||||||||||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagtag 127
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcat 35
||||| ||||||||||||||| ||||||||
Sbjct: 127 ctactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 85.7 bits (43), Expect = 1e-16
Identities = 111/134 (82%), Gaps = 6/134 (4%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||| | ||| |||||||||||| ||| | |||||||| ||| |||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 67 atgaatctaaacat------caatatgaatgtggaaaatgctaaaatgacttacattgtg 120
|||||||| |||| | ||||||||||| ||||| || ||||||||||||| ||
Sbjct: 78 gtgaatctagacatatacatccatatgaatgtgagaaatgttagaatgacttacattatg 19
Query: 121 aaacggagggagta 134
||||||||||||||
Sbjct: 18 aaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 111/136 (81%), Gaps = 10/136 (7%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||||||||||| ||| || ||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgtat 64
Query: 67 atgaatcta--------aacatcaatatgaatgtggaaaatgctaaaatgacttacattg 118
||| |||| |||||| ||| |||||||||||||| || |||||||||||||
Sbjct: 65 atg--tctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatta 122
Query: 119 tgaaacggagggagta 134
| ||||||||||||||
Sbjct: 123 taaaacggagggagta 138
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||| | ||||||||| ||||||| ||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtt 63
Query: 66 aatgaatctaaaca 79
||||||||||||||
Sbjct: 64 aatgaatctaaaca 77
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| | ||||||||| |||| |||||| | |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 97 aatgctaaaatgacttacattgtgaaacggagggagta 134
||||||| || | |||||||||||||||||||||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 83 atatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||| |||||| ||||||| || | |||||||||||||||||||| |||||
Sbjct: 56 atatgtatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 83.8 bits (42), Expect = 6e-16
Identities = 111/134 (82%), Gaps = 5/134 (3%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| ||||| |||||||||| |||||||||||| |||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 67 atgaatcta-----aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtga 121
|| |||||| | |||| || ||||||||| ||||||| ||| ||||||||| |||
Sbjct: 77 ataaatctagacatagcatctatgtgaatgtgggcaatgctagaataacttacattatga 18
Query: 122 aacggagggagtag 135
|||||||| |||||
Sbjct: 17 aacggaggaagtag 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 112/134 (83%), Gaps = 5/134 (3%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| ||| ||||| |||||||||| |||||||||| || |||| |
Sbjct: 4 ctacttcctccgtttcataatgtaagttattctagcattgcccacattcacatagatgct 63
Query: 66 aa---tgaatcta--aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtg 120
| | || || |||||| ||||||||||||| ||||||| ||| ||||||||| ||
Sbjct: 64 atgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatg 123
Query: 121 aaacggagggagta 134
||||||||||||||
Sbjct: 124 aaacggagggagta 137
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| ||||||||| |||||| ||||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 67 atgaatctaaacat 80
||||||||||||||
Sbjct: 98 atgaatctaaacat 85
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 102 catctatatgaatgtgggcaatgctaaaatgacttacattatgaaacggagggagta 158
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| ||| |||||||||||||| | |||| || ||||| ||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtt 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 100 gctaaaatgacttacattgtgaaacggagggagtag 135
|||| ||||||||||||| ||||||||||| |||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 85 atgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 5e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 90 tgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcat 43
|||||||||||||||||||| ||||||||||||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcat 72
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcat 56
|||| ||||||||||||||| ||||||||| |||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 83.8 bits (42), Expect = 6e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||||||| | ||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcat-tttcacatccatattgatgtta 63
Query: 67 atgaat 72
||||||
Sbjct: 64 atgaat 69
Score = 77.8 bits (39), Expect = 4e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 62 aacatcaatatggatgtg-aaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 44/46 (95%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 85 atgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 130
||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 64 atgaatgtg-aaaatgctagaatgacttacattgtgaaacggaggg 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 12 cctccgtttcacaatataagtcattctagcat 43
||||||||||||||| ||||||||||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcat 76
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| ||| ||||||||||||||| | ||||||||||| ||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| ||| |||||||||||||||| || | |||||||| ||||||
Sbjct: 159 ctactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtt 100
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| |||||||| | | ||||||| ||||||||||||| |||||||||||||||||
Sbjct: 100 aacatctatatgaatataggcaatgctagaatgacttacattatgaaacggagggagtag 159
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| ||||||||||| | ||||| ||||||||||||| ||||||||||| |||||
Sbjct: 63 aacatccatatgaatgtgagcattgctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| ||| ||||||||||||||| | ||||||||||| ||||||
Sbjct: 159 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 100
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| ||| |||||||||||||||| || | |||||||| ||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtt 63
Query: 66 aatgaatctaaacat 80
|||||||||| ||||
Sbjct: 64 aatgaatctagacat 78
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| |||||||| | | ||||||| ||||||||||||| |||||||||||||||||
Sbjct: 63 aacatctatatgaatataggcaatgctagaatgacttacattatgaaacggagggagtag 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| ||||||||||| | ||||| ||||||||||||| ||||||||||| |||||
Sbjct: 100 aacatccatatgaatgtgagcattgctagaatgacttacattatgaaacggaggaagtag 159
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| | |||||| | ||||||||| ||||||||||||| |||||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 66 atgaatctagacat 53
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| |||||| |||||| || ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 60.0 bits (30), Expect = 8e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| ||| |||| | ||||||||| | || |||||||| ||||||
Sbjct: 159 ctactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtt 100
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| ||| ||| || |||||||||| ||||||||||| ||||
Sbjct: 63 aacatctatatgaatgtgggcaatactagaaagacttacattatgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| |||||||| || ||||||| || | |||||||| |||||||||||||||||
Sbjct: 100 aacatctatatgaatatgagcaatgctagaaagtcttacattatgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||| | ||||||||| | ||||| ||||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 67 atgaatctaaaca 79
|||||||||||||
Sbjct: 98 atgaatctaaaca 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||| ||||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 100 aacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 24 aatataagtcattctagcatatcccacattcatattgatgttaatgaatctaaacat 80
|||||||||||||||||||| || |||||||||||||||| ||||||||||| ||||
Sbjct: 108 aatataagtcattctagcatttctcacattcatattgatgctaatgaatctagacat 52
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 28 taagtcattctagcatatcccacattcatattgatgttaatgaat 72
|||||||||||||||| || |||||||||||||||| ||||||||
Sbjct: 5 taagtcattctagcatttctcacattcatattgatgctaatgaat 49
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgactta 113
|||||||||||||||| |||||||| |||||||||
Sbjct: 69 catcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 4 tgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
||||||||||||||||||| | |||||| | ||||||||| ||||||||||||| ||||
Sbjct: 161 tgctacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 102
Query: 64 ttaatgaatctaaacat 80
||||||||||| ||||
Sbjct: 101 ctaatgaatctagacat 85
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| | |||||| | ||||||||| |||||| |||||| |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 67 atgaa 71
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 12 cctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaa 71
||||||||||| ||| |||||||||||||||| |||||||||||||| || |||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 72 tctaaacat 80
|||| ||||
Sbjct: 93 tctagacat 85
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 83 atatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagt 133
|||||||||||| |||||||| ||||||||||||| |||||||||||||||
Sbjct: 107 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagt 157
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||||||||||||||| ||| | |||||||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 67 atgaatcta 75
||||||||
Sbjct: 65 gtgaatcta 73
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 83 atatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||| | | |||||||| ||||||||||||| ||||||||||||||||
Sbjct: 56 atatgaatataggaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||||||||||||||| || |||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 67 atgaat 72
||||||
Sbjct: 98 atgaat 93
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||| | ||||||| ||||||||||||| ||||||||||||||||
Sbjct: 63 aacatctatatgaatgttggtaatgctagaatgacttacattatgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||| |||||| ||||||| ||||||||||||| ||||||||||| ||||
Sbjct: 100 aacatctatatatatgtgggcaatgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 82 aatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||| |||| ||||||||||||||||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 73.8 bits (37), Expect = 5e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatatt 59
|||||||||||||||||||| ||||||||| ||| || |||||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 102 taaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||||||||||||||||||||
Sbjct: 37 taaaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcatt 36
|||| ||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| | |||||| | ||||||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 73.8 bits (37), Expect = 5e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| | |||||| | ||||||||| ||||||||||||| |||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 67 atgaatcta 75
|||||||||
Sbjct: 100 atgaatcta 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| ||||||| || | |||| | | ||||||||||||||||
Sbjct: 102 aacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 160
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
|||| ||||||||||||||| ||||||||||||| || || ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||| |||||| |||||| |||||||||||||||| |||||| |||||||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 81.8 bits (41), Expect = 2e-15
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| | |||||| | ||||||||| ||||||||||||| |||||
Sbjct: 133 ctactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtt 74
Query: 66 aatgaatctaaacatcaatatgaatgtgg 94
|||||||||| |||| ||||||||||||
Sbjct: 73 aatgaatctagacatatatatgaatgtgg 45
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatat 58
|||||||||||||||| | |||||| | |||||| || |||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtattacccacattcatat 56
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| |||| | ||||||||| ||||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||||||||| |||||||||| | |||||||| ||||||||||||||||
Sbjct: 63 aacatctatatgaatgtgaggaatgctaaaaagtcttacattatgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||| | || |||||| | ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| ||||||| || | |||||||| ||||||||||| ||||
Sbjct: 100 aacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| |||| | ||||||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||||||||| |||||||||| | |||||||| ||||||||||||||||
Sbjct: 100 aacatctatatgaatgtgagcaatgctaaaaagtcttacattatgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||| | || |||||| | ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| ||||||| || | |||||||| ||||||||||| ||||
Sbjct: 63 aacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 87 gaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtagcaa 138
||||||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagtagcaa 1
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 3 ttgctacttcctccgtttcacaatataagtcattctagca 42
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 ttgctacttcctccgtttcacaatgtaagtcattctagca 40
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctag 40
|||| ||||||| ||| |||||||||||||||||
Sbjct: 85 tactacctccgtctcataatataagtcattctag 52
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 79.8 bits (40), Expect = 9e-15
Identities = 75/87 (86%), Gaps = 6/87 (6%)
Strand = Plus / Minus
Query: 32 tcattctagcatatcccacattcatattgatgttaatgaatc------taaacatcaata 85
|||||||||||| ||||||||||||||||||| ||||||||| | | ||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatcgattcattagcatcaata 28
Query: 86 tgaatgtggaaaatgctaaaatgactt 112
||||||||| |||||||| ||||||||
Sbjct: 27 tgaatgtgggaaatgctagaatgactt 1
Score = 79.8 bits (40), Expect = 9e-15
Identities = 75/87 (86%), Gaps = 6/87 (6%)
Strand = Plus / Plus
Query: 29 aagtcattctagcatatcccacattcatattgatgttaatgaatc------taaacatca 82
||||||||||||||| ||||||||||||||||||| ||||||||| | | |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatcgattcattagcatca 60
Query: 83 atatgaatgtggaaaatgctaaaatga 109
|||||||||||| |||||||| |||||
Sbjct: 61 atatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 83 atatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| ||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 88 aatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatat 58
|||| ||||||||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacatt 53
|||| ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 15 ccgtttcacaatataagtcattctagcatatcccacattcatat 58
|||||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 83 atatgaatgtggaaaatgctaaaatgacttacattgtgaaacgg 126
|||| ||||||| |||||||| ||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||||||||||| ||| |||||| | |||||||||||||||||||||||||
Sbjct: 100 aacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| | || ||| || |||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| |||||||| | |||||| || |||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 67 atgaa 71
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 80 tcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||| || |||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattga 61
|||| ||||||||||||||| |||||||||||||||| |||||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcat 43
||||||| ||||||||||||||||||||||||||||||
Sbjct: 105 ctacttcttccgtttcacaatataagtcattctagcat 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 97 aatgctaaaatgacttacattgtgaaacgga 127
||||||| ||||||||| |||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacgga 97
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 29 aagtcattctagcatatcccacattcatattgatgttaatgaatcta 75
||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 47
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 29 aagtcattctagcatatcccacattcatattgatgttaatgaatcta 75
||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 77
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||||||||||||| |||||||| ||||||||
Sbjct: 37 aacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgactt 112
||||||||||||||||||| |||||||| ||||||||
Sbjct: 87 aacatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||||||||||| ||| |||||| | |||||||||||||||||||||||||
Sbjct: 63 aacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| | || ||| || |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| |||||||| | |||||| || |||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 67 atgaa 71
|||||
Sbjct: 98 atgaa 94
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 89 atgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacat 52
|||| ||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 97 aatgctaaaatgacttacattgtgaaacggagggagta 134
||||||| ||||| ||||||||||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcat 43
|||| ||||||||||||||| ||| ||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcat 59
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
|||||||||| |||||| |||||||||| ||||||||| | || |||||||| ||||||
Sbjct: 4 ctacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtt 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| |||||||| | ||||||||| |||| |||||||| |||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 67 atgaatcta 75
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 75.8 bits (38), Expect = 1e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||| | ||||||||| | |||||||||| | |||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcat-tgccacattcatttagatgtta 81
Query: 67 atgaatctaaacat 80
|||||||||||||
Sbjct: 80 ttgaatctaaacat 67
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcat 43
|||||||||||||||||||| |||| | |||||||||
Sbjct: 5 tacttcctccgtttcacaatctaagcctttctagcat 41
Score = 46.1 bits (23), Expect = 1e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| | |||||||||| || ||||| || | |||||||||||||||||||| ||||
Sbjct: 82 aacatctaaatgaatgtggcaa-tgctagaaagtcttacattgtgaaacggaggaagta 139
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||| | ||||||||| |||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| | ||||||||||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 63 aacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||| |||||||||| |||| | ||||||||| ||||||||||| | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 67 atgaatctaaacat 80
||||||||||||||
Sbjct: 65 atgaatctaaacat 78
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 97 aatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||| | |||||||||||||||||||||||||
Sbjct: 123 aatgctaaaaagtcttacattgtgaaacggagggagta 160
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| | |||||||||| ||||||| || | ||||||||||||||| |||||||||
Sbjct: 63 aacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 75.8 bits (38), Expect = 1e-13
Identities = 113/137 (82%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 3 ttgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgat 62
|||||||| ||||||||| |||||||||| | ||||| ||| ||||||| |||| |||
Sbjct: 138 ttgctactacctccgttttacaatataagactttctaacattgcccacatatatatagat 79
Query: 63 gttaatgaatctaaaca--tcaatatgaatgtggaaaatgctaaaatgacttacattgtg 120
||||||||||||||||| | |||| |||||| ||||||| || | |||| ||| ||
Sbjct: 78 gttaatgaatctaaacacatatatatagatgtgggcaatgctagaaagtcttatattatg 19
Query: 121 aaacggagggagtagca 137
||||||||||| |||||
Sbjct: 18 aaacggagggaatagca 2
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||| | ||||||||| ||||||||||| | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| | ||||||||| ||| || ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 67 atgaatctaaa 77
|||||||||||
Sbjct: 98 atgaatctaaa 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||| || |||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 100 aacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 85 atgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| | |||||| || ||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| ||| ||| || | |||||||||||||||||||||||||
Sbjct: 100 aacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| | |||||| | |||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 67 atgaat 72
||||||
Sbjct: 65 atgaat 70
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 110 cttacattgtgaaacggagggagta 134
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||| | ||||||||| |||| |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| | |||||| || ||||| | ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 67 atgaatctaaa 77
|||||||||||
Sbjct: 98 atgaatctaaa 88
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 110 cttacattgtgaaacggagggagta 134
|||||||||||||||||||||||||
Sbjct: 134 cttacattgtgaaacggagggagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| | |||||| ||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 63 aacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 73.8 bits (37), Expect = 5e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| | |||||| | ||||||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 67 atgaatcta 75
| |||||||
Sbjct: 65 acgaatcta 73
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 73.8 bits (37), Expect = 5e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| | ||||||||| ||| ||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 67 atgaatcta 75
|||||||||
Sbjct: 98 atgaatcta 90
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| ||| |||| | ||||||||| |||||||||| || |||| |
Sbjct: 4 ctacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgct 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||||||| || ||||||| || | |||||||||||||||||||||||||
Sbjct: 100 aacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 86 tgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||| ||||||| || | |||||||| ||||||||||| |||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 73.8 bits (37), Expect = 5e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| | |||||| | ||||||||| ||||||||||||| |||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 67 atgaatcta 75
|||||||||
Sbjct: 99 atgaatcta 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| | |||||| | ||||||||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 67 a 67
|
Sbjct: 65 a 65
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| ||||||| || | |||| | | ||||||||||||||||
Sbjct: 63 aacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| ||||||| || | |||| | | ||||||||||||||||
Sbjct: 101 aacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacggagggagta 159
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 5e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| ||| | ||||||||| ||||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 67 atgaatctaaaca 79
|||||||||||||
Sbjct: 65 atgaatctaaaca 77
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 110 cttacattgtgaaacggagggagtagcaa 138
|||||||||||||||||||||||||||||
Sbjct: 134 cttacattgtgaaacggagggagtagcaa 162
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 73.8 bits (37), Expect = 5e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||| | ||||||||| ||||||||||||| |||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 67 atgaatcta 75
|||||||||
Sbjct: 80 atgaatcta 72
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| ||||||| || | |||||||| ||||||||||||||||
Sbjct: 82 aacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 140
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||| ||| || ||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 51 atcaatataaatatgaaaaatgctaaaatgatttacattgtgaaatggagggagta 106
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 105 aatgacttacattgtgaaacggagggagta 134
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcatt 36
|||||||||||||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 125
||||||||||||||||| ||||||||||||||||| ||||||| ||||
Sbjct: 58 catcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 85 atgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||| |||| |||||| |||||||| |||||| ||||||||||||||||||| ||
Sbjct: 114 tacttccctcgttccacaatgcaagtcattttagcatttcccacattcatattgatgcta 55
Query: 67 atgaat 72
||||||
Sbjct: 54 atgaat 49
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcat 56
|||| ||||||||||||||| ||| |||||||||||| || |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 69.9 bits (35), Expect = 9e-12
Identities = 111/138 (80%), Gaps = 10/138 (7%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||| | ||||||||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 67 atgaatct----------aaacatcaatatgaatgtggaaaatgctaaaatgacttacat 116
|||||| | | ||||| |||||||||||| ||||||| || | |||||||
Sbjct: 65 atgaatttagacacacagacacatctatatgaatgtgggcaatgctagaaagtcttacat 124
Query: 117 tgtgaaacggagggagta 134
| ||||||||||||||||
Sbjct: 125 tatgaaacggagggagta 142
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| ||||||| || | |||||||| ||||||||||||||||
Sbjct: 63 aacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||| ||||||||||| ||| |||| | ||||||||| ||||||||||||| |||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||| | || |||||| |||| |||||| | ||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtt 100
Query: 66 aatgaatctaaacat 80
|||||||||| ||||
Sbjct: 99 aatgaatctagacat 85
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| | ||||||||| | || || ||||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 67 atgaatctaaaca 79
|||||||||||||
Sbjct: 65 atgaatctaaaca 77
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| | |||||| ||| |||||||||| | |||||||||||||||||||| |||||
Sbjct: 100 aacatctaaatgaatatgggcaatgctaaaaagtcttacattgtgaaacggaggaagtag 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 97 aatgctaaaatgacttacattgtgaaacggagggagta 134
||||||| || | |||||||||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 77 acatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||| ||| || ||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 89 atgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||| ||||| ||| ||||||||| ||||||||||| ||||||||
Sbjct: 50 atgtgaaaaatactagaatgacttatattgtgaaacgaagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctag 40
|||| ||| |||||||||||||||||||||||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctag 38
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcat 43
|||| ||||||||||||||| ||| ||||||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcat 68
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| ||| |||| | ||||||||| |||||||||||| |||||
Sbjct: 157 ctacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtt 98
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 97 aatgaatcta 88
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||| | ||||||||| || | ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 67 atgaatcta 75
|||||||||
Sbjct: 65 atgaatcta 73
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 83 atatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||||||||| ||||||| || | |||||||| ||||||||||| |||||
Sbjct: 105 atatgaatgtggacaatgctagaaagtcttacattatgaaacggaggaagtag 157
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||||| | | ||||||| || | |||||||| ||||||||||||||||
Sbjct: 63 aacatcaatatgaatataggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| | |||||| || |||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||| ||| ||| ||| || | |||||||||||||||||||||||||
Sbjct: 100 aacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| |||||||||||| || |||| | |||||| | |||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 67 atgaat 72
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| | ||||| ||| ||||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| |||| | || |||||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 67 atgaatcta 75
|| ||||||
Sbjct: 65 ataaatcta 73
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| |||||||||||| |||| || || | |||||||||||||||||||||||||
Sbjct: 102 catctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacggagggagta 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| |||||||||||| ||||||| || | |||||||| ||||||||||| ||||
Sbjct: 61 catctatatgaatgtgggtaatgctataaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacat 52
||||||||||||| |||||| |||||||||||||||| ||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 100 gctaaaatgacttacattgtgaaacggagggagta 134
|||| ||||||||||||||||||||||||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 89 atgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||| |||||||||||||||| |||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagc 41
|||| ||||||||||||||| ||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||||||||||||||| || || ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 67 atgaatctaa 76
|||||||||
Sbjct: 65 gtgaatctaa 74
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 86 tgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||||| ||||||||| ||||||||||||| |||||| ||||||||||
Sbjct: 110 tgaatgtgaaaaatgctacaatgacttacattatgaaacagagggagtag 159
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 96 aaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||| ||||||||||||| ||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| ||| |||| | ||||||||| | |||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 47 ccacattcatattgatgttaatgaatctaaaca 79
|||||||||||| ||||||||||||||||||||
Sbjct: 118 ccacattcatatagatgttaatgaatctaaaca 86
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||| || ||||||| || | |||||||| ||||||||||| ||||
Sbjct: 63 aacatctatatgaatgtagacaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||||||||||| || ||| || | |||||||| ||||||||||||||||
Sbjct: 100 aacatctatatgaatgtggacaaacctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa
Japonica Group
Length = 151
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||| | ||||||||| | |||||||| | ||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtt 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| ||| |||| | ||||||||| ||||||| ||||| |||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 67 atgaatcta 75
|||||||||
Sbjct: 87 atgaatcta 79
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||| |||||| ||||||| || | |||||||| ||||||||||||||||
Sbjct: 89 aacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 97 aatgctaaaatgacttacattgtgaaacggagggagtag 135
||||||| || | |||||||||||||||||||| |||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||| | | ||||||| | ||||||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtt 63
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| || ||||||||| |||| ||||| | ||||||||||||||||||||||||||
Sbjct: 100 aacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggagggagtag 159
Score = 60.0 bits (30), Expect = 8e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||||||| |||| | || || ||| |||||||||| || ||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtt 100
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||| ||||||||||| ||||||| | | ||||||||||||||||||||||||||
Sbjct: 63 aacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||| | || |||| | ||||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 63.9 bits (32), Expect = 5e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| |||||||||||||||||||| | || ||||| ||||||| |||| ||||||
Sbjct: 155 ctactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtt 96
Query: 66 aatgaatctaaa 77
||||||||||||
Sbjct: 95 aatgaatctaaa 84
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 99 tgctaaaatgacttacattgtgaaacggagggagtag 135
|||||||| | |||| |||||||||||||||||||||
Sbjct: 119 tgctaaaaagtcttatattgtgaaacggagggagtag 155
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| | |||||||||| || |||| || | |||||||||||||||||||| ||||
Sbjct: 63 aacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatatt 59
|||||||||||||||||||| ||||| ||| ||| || |||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 82 aatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||| |||| ||| ||| ||||||||||||||||||||| ||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 82 aatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||| |||| || ||| ||||||||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatatt 59
|||||||||||||||||||| ||||| ||| || || || ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||| |||| |||||| | || || ||||| |||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 67 atgaatctaaaca 79
|||||| ||||||
Sbjct: 77 atgaatttaaaca 65
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 97 aatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||| |||||||||||||||||||| ||||
Sbjct: 100 aatgctaaaatgtcttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| | |||||| | ||||||||| ||||||||||||| | |||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtt 63
Query: 66 aatgaatctaaacatcaatat 86
|||||||||| |||| |||||
Sbjct: 64 aatgaatctagacatgaatat 84
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||| ||||||||||| | |||||| | ||||||||| ||||||||||||| | |||
Sbjct: 129 ctactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtt 70
Query: 66 aatgaatctaaacatcaatat 86
|||||||||| |||| |||||
Sbjct: 69 aatgaatctagacatgaatat 49
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcat 43
|||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcat 41
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 96 aaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||| ||||||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 96 aaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 53 aaatgctaaaatgacttatattatgaaacggatggagtag 92
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 14 tccgtttcacaatataagtcattctagcatatcccacatt 53
||||||||| ||||||||||||| |||||| || ||||||
Sbjct: 84 tccgtttcataatataagtcattttagcatttctcacatt 45
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 65.9 bits (33), Expect = 1e-10
Identities = 108/133 (81%), Gaps = 5/133 (3%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| | |||||| | ||||||||| ||||||||| || |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 67 atgaatcta-----aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtga 121
|| |||||| |||||| ||||||||||||| ||||||| || | |||| | | |||
Sbjct: 65 ataaatctagacacaacatctatatgaatgtggacaatgctagaaagtcttataatatga 124
Query: 122 aacggagggagta 134
|||||||| ||||
Sbjct: 125 aacggaggaagta 137
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
|||||||||||||||| | |||||| | ||||||||| |||||||||||| ||||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| || |||||||||| ||||||| || | |||| | | ||||||||||||||||
Sbjct: 63 aacatctatgtgaatgtggacaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||| |||| |||||| | || || ||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 67 atgaatctaaaca 79
|||||| ||||||
Sbjct: 65 atgaatttaaaca 77
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 97 aatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||||||| |||||||||||||||||||| ||||
Sbjct: 42 aatgctaaaatgtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcat 43
||||| |||||||||||||||||||||||||||||||
Sbjct: 89 tacttactccgtttcacaatataagtcattctagcat 53
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcata 44
|||||||||||||||||| | |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacagtgtaagtcattctagcata 42
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 94 gaaaatgctaaaatgacttacattgtgaaacggag 128
|||||||||| ||||||||| ||||||||||||||
Sbjct: 49 gaaaatgctagaatgacttatattgtgaaacggag 83
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 98 atgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||||||||| ||||||||||||| ||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 79 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||||| |||||| ||||| ||| |||||||| |||||||||||||||| ||||
Sbjct: 53 atcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 60.0 bits (30), Expect = 8e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 105 aatgacttacattgtgaaacggagggagta 134
||||||||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 8e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||||||| |||||||||||| || | |||||| |||||||| |||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 67 at 68
||
Sbjct: 48 at 47
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattcta 39
|||| ||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggga 131
|||||| ||||||||||||| ||||||| || | |||||||| |||||||||||||
Sbjct: 50 aacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacggaggga 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 12 cctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaa 71
||||||||||| ||| |||| | ||||||||| |||||||||||| |||||||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 72 tcta 75
||||
Sbjct: 43 tcta 40
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 91 gtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 48 gtggaaaatgctagaatgacttatattatgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 96 aaatgctaaaatgacttacattgtgaaacggagggagtagca 137
|||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 108 aaatgctagaatgacttacattatgaaacgaagggagtagca 149
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcat 43
|||| ||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcat 41
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 tgctacttcctccgtttcacaatataagtcattctagcat 43
||||||| ||| ||||||| ||| ||||||||||||||||
Sbjct: 149 tgctactcccttcgtttcataatgtaagtcattctagcat 110
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 88 aatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||||||| |||||||||| | |||||||||||||||||||| |||||
Sbjct: 110 aatgtggacaatgctaaaaagtcttacattgtgaaacggaggaagtag 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||||||| |||| | || |||||| ||||||| || | ||| ||
Sbjct: 157 ctacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatt 98
Query: 66 aatgaatcta 75
||||||||||
Sbjct: 97 aatgaatcta 88
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 89 atgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||||| |||| || || | |||||||| ||||||||||||||||
Sbjct: 50 atgtggacaatggtagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| |||||||||||| |||||||||| | ||||||| ||||||||||||||||
Sbjct: 84 aacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaacggagggagta 142
Score = 60.0 bits (30), Expect = 8e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 77 acatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
||||| |||||||||||| ||||||| || | |||||||| ||||||||||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 64
|||| ||||||||||| ||| |||| | ||||||||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||| ||||||||||||| |||| | ||||||||| ||||||||||||| ||| ||
Sbjct: 126 tacttcatccgtttcacaatgtaagactttctagcattgcccacattcatatggatacta 67
Query: 67 atgaatctaaacatcaatatgaa 89
|||||| || |||| ||| ||||
Sbjct: 66 atgaatttagacataaatgtgaa 44
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 83 atatgaatgtggaaaatgctaaaatgacttacattgtgaaacgga 127
|||||||||||| ||||||| || | ||||||||||||||||||
Sbjct: 75 atatgaatgtgggcaatgctagaaagtcttacattgtgaaacgga 119
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 37 ctagcatatcccacattcatattgatgttaatgaatcta 75
||||||| |||||||||||||||||||| ||||||||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatcta 50
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 45 tcccacattcatattgatgttaatgaatctaaacatc 81
|||||||||||||||||||| |||||||||| |||||
Sbjct: 9 tcccacattcatattgatgtcaatgaatctagacatc 45
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 77 acatcaatatgaatgtggaaaatgcta 103
|||||||||||||||||| ||||||||
Sbjct: 61 acatcaatatgaatgtgggaaatgcta 87
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacatt 53
||||| |||||||||||||| |||||||||||||||| ||| |||||
Sbjct: 89 tacttactccgtttcacaatgtaagtcattctagcatttcctacatt 43
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctag 40
|||||||||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 96 aaatgctaaaatgacttacattgtgaaacggag 128
|||||||| ||||||||||||||||||||||||
Sbjct: 51 aaatgctagaatgacttacattgtgaaacggag 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 105 aatgacttacattgtgaaacggagggagta 134
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 65
||||||||||||||||| | |||||| | ||||||||| |||| |||||||| |||| |
Sbjct: 115 ctacttcctccgtttcatattataagactttctagcattacccatattcatatagatgat 56
Query: 66 aatgaat 72
|||||||
Sbjct: 55 aatgaat 49
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 4 tgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
||||||| ||||||||||| |||||| | ||||||||| ||||||||||||| |||
Sbjct: 161 tgctactacctccgtttcaagttataagactttctagcattgcccacattcatatatatg 102
Query: 64 ttaatgaatct 74
|||||||||||
Sbjct: 101 ttaatgaatct 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| |||||| | |||| |||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgtta 64
Query: 67 atgaatctaaacat 80
|| |||||| ||||
Sbjct: 65 ataaatctagacat 78
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||||| ||||||||||||| ||||||| || | |||||||| ||||| ||||||||||
Sbjct: 63 aacatctatatgaatgtggacaatgctagaaagtcttacattatgaaatggagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||| ||||| ||| |||| | ||||||||| |||||||||||| |||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 67 atgaatcta 75
|| ||||||
Sbjct: 65 ataaatcta 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 97 aatgctaaaatgacttacattgtgaaacggagggagta 134
||||||| || | |||||||| ||||||||||||||||
Sbjct: 87 aatgctagaaagtcttacattatgaaacggagggagta 124
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||| | |||||| | ||||| ||| ||||||||||||| |||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 78 atgaatctagacat 65
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||||||||||||||| | |||||| | ||||| ||| ||||||||||||| |||| |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 67 atgaatctaaacat 80
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
|||| ||||||||||||||| |||| ||||||||| ||||||| | || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 67 atgaatctaaacat 80
||||||||||||||
Sbjct: 65 atgaatctaaacat 78
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcat 56
|||||||||||||| ||||||||||| | ||||||||| | |||||||||
Sbjct: 139 ctacttcctccgttccacaatataagactttctagcattactcacattcat 89
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 110 cttacattgtgaaacggagggagta 134
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 60.0 bits (30), Expect = 8e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 66
||||||||| |||||||||| |||| | ||||||| | ||||||||||||| ||| |||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatta 55
Query: 67 atgaat 72
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 60.0 bits (30), Expect = 8e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtag 135
|||| |||||||||||| ||||||| || ||||||||||||||||||||||||||
Sbjct: 64 catctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagtag 121
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 7 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
|||||||||||||||||||| |||| | ||||||| | ||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagatg 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 6 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatg 63
||||| ||||||||||||||| |||| ||||||||| ||||||||||||| ||||
Sbjct: 121 ctactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatagatg 64
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 134
|||| |||||||||||| || |||| || | |||||||||||||||||||| ||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
