miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 165 bits (83), Expect = 2e-40
Identities = 127/141 (90%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 8 ttactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||
Sbjct: 1 ttactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Query: 68 gttaatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgactta 127
| ||||||||| || || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 gctaatgaatcgattcat---tagcatcaatatgaatgtgggaaatgctagaatgactta 117
Query: 128 cattgtgaaactgagggagta 148
|||| |||||| |||||||||
Sbjct: 118 cattatgaaacggagggagta 138
Score = 163 bits (82), Expect = 9e-40
Identities = 126/140 (90%), Gaps = 3/140 (2%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| ||||||| ||||||| |||||||||||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
||||||| || || |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 78 atgaatcgattcat---tagcatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 132 gtgaaactgagggagtagta 151
||||||| ||||||||||||
Sbjct: 21 gtgaaacggagggagtagta 2
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 163 bits (82), Expect = 9e-40
Identities = 123/134 (91%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatc 71
Query: 79 tatctattga-tagcatcaatatgaatgtggaaaatgctaga-atgacttacattgtgaa 136
|| |||| | |||||||||||||||||||| |||||||| | |||||||||||||||||
Sbjct: 72 tagctatacattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaa 131
Query: 137 actgagggagtagt 150
|| |||||||||||
Sbjct: 132 acggagggagtagt 145
Score = 129 bits (65), Expect = 1e-29
Identities = 124/141 (87%), Gaps = 2/141 (1%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcat-tttagcattacccacattcatattgatg 68
|||||||| ||||||||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 145 actactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatg 86
Query: 69 ttaatgaatctatctattgat-agcatcaatatgaatgtggaaaatgctagaatgactta 127
||||| || | ||| || ||||||||||||||||||| |||||||| |||||||||
Sbjct: 85 ctaatgtatagctagattcattagcatcaatatgaatgtgggaaatgctaaaatgactta 26
Query: 128 cattgtgaaactgagggagta 148
||||||||||| |||| ||||
Sbjct: 25 cattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 163 bits (82), Expect = 9e-40
Identities = 123/134 (91%), Gaps = 2/134 (1%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 136 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatc 77
Query: 79 tatctattga-tagcatcaatatgaatgtggaaaatgctaga-atgacttacattgtgaa 136
|| |||| | |||||||||||||||||||| |||||||| | |||||||||||||||||
Sbjct: 76 tagctatacattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaa 17
Query: 137 actgagggagtagt 150
|| |||||||||||
Sbjct: 16 acggagggagtagt 3
Score = 129 bits (65), Expect = 1e-29
Identities = 124/141 (87%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 10 actactccatccgtttcacaatgttagtcat-tttagcattacccacattcatattgatg 68
|||||||| ||||||||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatg 62
Query: 69 ttaatgaatctatctattgat-agcatcaatatgaatgtggaaaatgctagaatgactta 127
||||| || | ||| || ||||||||||||||||||| |||||||| |||||||||
Sbjct: 63 ctaatgtatagctagattcattagcatcaatatgaatgtgggaaatgctaaaatgactta 122
Query: 128 cattgtgaaactgagggagta 148
||||||||||| |||| ||||
Sbjct: 123 cattgtgaaacggaggaagta 143
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 149 bits (75), Expect = 1e-35
Identities = 120/135 (88%), Gaps = 5/135 (3%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
|||||| |||||||| ||||||| ||||||| |||||||||||||||||||||||| |||
Sbjct: 139 tccgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaatgtatc 80
Query: 79 tatctattgatag-----catcaatatgaatgtggaaaatgctagaatgacttacattgt 133
||| | | |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tatatctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgt 20
Query: 134 gaaactgagggagta 148
||||| |||||||||
Sbjct: 19 gaaacggagggagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 123/142 (86%), Gaps = 5/142 (3%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 72 atgaatctatctattga-----tagcatcaatatgaatgtggaaaatgctagaatgactt 126
||| ||||| ||| || || ||||||||||||||||| |||||||||||||||||
Sbjct: 65 atgtatctagatatagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 124
Query: 127 acattgtgaaactgagggagta 148
|||||||| ||| |||| ||||
Sbjct: 125 acattgtggaacggaggaagta 146
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 149 bits (75), Expect = 1e-35
Identities = 133/150 (88%), Gaps = 8/150 (5%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 71 aatgaatcta-----tct--attga-tagcatcaatatgaatgtggaaaatgctagaatg 122
|||||||||| ||| ||| | || ||||||||||||||||| |||||||||||||
Sbjct: 90 aatgaatctagaatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatg 31
Query: 123 acttacattgtgaaactgagggagtagtat 152
|||||||||||||||| |||| ||||||||
Sbjct: 30 acttacattgtgaaacggaggaagtagtat 1
Score = 147 bits (74), Expect = 5e-35
Identities = 132/149 (88%), Gaps = 8/149 (5%)
Strand = Plus / Plus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||| | ||||||||||||||| ||||||| ||||||| ||||||||||||||||||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Query: 69 ttaatgaatcta-----tct--attga-tagcatcaatatgaatgtggaaaatgctagaa 120
|||||||||||| ||| ||| | || ||||||||||||||||| |||||||||||
Sbjct: 62 ttaatgaatctagacattctagattcattaacatcaatatgaatgtgggaaatgctagaa 121
Query: 121 tgacttacattgtgaaactgagggagtag 149
|||||||||||||||||| ||||||||||
Sbjct: 122 tgacttacattgtgaaacggagggagtag 150
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 147 bits (74), Expect = 5e-35
Identities = 121/137 (88%), Gaps = 6/137 (4%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||||||| || |||| |||||||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
||||||||| |||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 75 atgaatcta------gataacatcaatatgaatgtggaaaatgctagaatgacttatatt 22
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 111/131 (84%), Gaps = 8/131 (6%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| ||||||| |||||||||||||||||||| ||
Sbjct: 12 tccgtttcacaatataagtcattctagcattttccacattcatattgatgtta-----tc 66
Query: 79 tatctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
|| ||| || | ||||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 67 tag--attcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 138 ctgagggagta 148
| |||||||||
Sbjct: 125 cggagggagta 135
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 145 bits (73), Expect = 2e-34
Identities = 122/137 (89%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||||||| ||||||| |||||||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|||||||||| | | || ||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 80 atgaatctataca-tattaacattaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 116/131 (88%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||||||||||||| |||||||| ||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat--atg 69
Query: 79 tatctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
||| ||| || | ||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 70 tatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 129
Query: 138 ctgagggagta 148
| |||||||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 143 bits (72), Expect = 8e-34
Identities = 117/130 (90%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatc 71
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
| | ||| || ||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 72 t-tttat---taacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaac 127
Query: 139 tgagggagta 148
|||||||||
Sbjct: 128 ggagggagta 137
Score = 117 bits (59), Expect = 5e-26
Identities = 119/137 (86%), Gaps = 4/137 (2%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| |||||||||||| || ||||||| ||||||| |||||||||||||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|| || || ||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 77 ataaaagattc-att---accatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 143 bits (72), Expect = 8e-34
Identities = 116/131 (88%), Gaps = 6/131 (4%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatc 71
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| || | ||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 72 ta------gacaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaac 125
Query: 139 tgagggagtag 149
||||||||||
Sbjct: 126 ggagggagtag 136
Score = 107 bits (54), Expect = 5e-23
Identities = 118/138 (85%), Gaps = 6/138 (4%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||| ||||| ||||||| ||||||| ||||||||||||||||||||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Query: 71 aatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacat 130
| | || ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 76 ---gtctagattcattga---catcaatatgaatgtgggaaatgctagaatgacttacat 23
Query: 131 tgtgaaactgagggagta 148
|||||||| |||| ||||
Sbjct: 22 tgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 141 bits (71), Expect = 3e-33
Identities = 116/130 (89%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||||||||||| | || ||| ||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaatc 71
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| || |||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 72 tagacat--atagcatcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaac 129
Query: 139 tgagggagta 148
|||||||||
Sbjct: 130 ggagggagta 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 118/139 (84%), Gaps = 6/139 (4%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||| ||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatgcta 80
Query: 72 -atgaatctatctattga-tagcatcaatatgaatgtggaaaatgctagaatgacttaca 129
||| |||| ||| | |||||||||||| ||| || |||||||| |||||||||||
Sbjct: 79 tatg--tcta--gattcattagcatcaatataaatatgagaaatgctaaaatgacttaca 24
Query: 130 ttgtgaaactgagggagta 148
||||||||| |||| ||||
Sbjct: 23 ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 141 bits (71), Expect = 3e-33
Identities = 118/131 (90%), Gaps = 2/131 (1%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 79 tatctattga-tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
|| ||| | || |||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 72 -attgattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaa 130
Query: 138 ctgagggagta 148
| |||||||||
Sbjct: 131 cggagggagta 141
Score = 139 bits (70), Expect = 1e-32
Identities = 123/138 (89%), Gaps = 2/138 (1%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| | ||||| ||||||| | |||||||||||||||||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 72 atgaatctatctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttacat 130
||||||| || ||| || | ||||||||||||||||| |||||||||||||||||||||
Sbjct: 81 atgaatcaatg-attcattaacatcaatatgaatgtgggaaatgctagaatgacttacat 23
Query: 131 tgtgaaactgagggagta 148
|||||||| |||| ||||
Sbjct: 22 tgtgaaacggaggaagta 5
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 141 bits (71), Expect = 3e-33
Identities = 115/131 (87%), Gaps = 9/131 (6%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 125 tccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatc 66
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ta---------aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 15
Query: 139 tgagggagtag 149
||||||||||
Sbjct: 14 ggagggagtag 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 117/139 (84%), Gaps = 9/139 (6%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 71 aatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacat 130
| || || || || ||||||||||||||||| | |||||||||||||||| ||
Sbjct: 64 ta-gattc-at-------taacatcaatatgaatgtgggatatgctagaatgacttatat 114
Query: 131 tgtgaaactgagggagtag 149
|||||||| |||| |||||
Sbjct: 115 tgtgaaacggaggaagtag 133
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 141 bits (71), Expect = 3e-33
Identities = 120/137 (87%), Gaps = 7/137 (5%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| || |||||||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|||||||||| || |||||||||||||||||||||||||| ||||||||| |||
Sbjct: 70 atgaatctat-------taacatcaatatgaatgtggaaaatgctataatgacttatatt 18
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 17 gtgaaacagaggaagta 1
Score = 105 bits (53), Expect = 2e-22
Identities = 108/127 (85%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 22 gtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatctat 81
|||||||||| | ||||||| ||||||| |||||||||||||||||||||| || ||
Sbjct: 11 gtttcacaatataagtcattatagcattttccacattcatattgatgttaatagattcat 70
Query: 82 ctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactga 141
|| ||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 71 -------taacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacaga 123
Query: 142 gggagta 148
|||||||
Sbjct: 124 gggagta 130
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 141 bits (71), Expect = 3e-33
Identities = 116/130 (89%), Gaps = 7/130 (5%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 127 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaatc 68
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
| |||| |||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 67 aa------gata-catcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaac 15
Query: 139 tgagggagta 148
|| ||||||
Sbjct: 14 ggatggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 118/139 (84%), Gaps = 9/139 (6%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt-t 70
|||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| |
Sbjct: 5 tactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgatgtat 64
Query: 71 aatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacat 130
||| || || || ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 65 cttgattc-at-------taacatcaatatgaatgtgggaaatgctaaaatgacttacat 116
Query: 131 tgtgaaactgagggagtag 149
|||||||| |||| |||||
Sbjct: 117 tgtgaaacggaggaagtag 135
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 139 bits (70), Expect = 1e-32
Identities = 122/136 (89%), Gaps = 5/136 (3%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| ||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaatc 71
Query: 79 tat--cta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgt 133
||| ||| || || | ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 131
Query: 134 gaaactgagggagtag 149
||||| ||||||||||
Sbjct: 132 gaaaccgagggagtag 147
Score = 135 bits (68), Expect = 2e-31
Identities = 125/144 (86%), Gaps = 5/144 (3%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| || |||||||||||| ||||||| ||||||| ||||||||||||||||||||
Sbjct: 147 ctactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 71 aatgaatctatctattgat-----agcatcaatatgaatgtggaaaatgctagaatgact 125
|||||| ||| || ||| | ||||||||||||||||||||||||||||||||||
Sbjct: 87 aatgaaactagacatagattcattaacatcaatatgaatgtggaaaatgctagaatgact 28
Query: 126 tacattgtgaaactgagggagtag 149
|||||| |||||| |||| |||||
Sbjct: 27 tacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 139 bits (70), Expect = 1e-32
Identities = 116/130 (89%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| || ||| |||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 72 tagacatatata-catcaatatgtatgtacaaaatgctagaatgacttacattgtgaaac 130
Query: 139 tgagggagta 148
|||| ||||
Sbjct: 131 ggaggaagta 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 61 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggtagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 139 bits (70), Expect = 1e-32
Identities = 125/141 (88%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || |||| ||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 72 atgaatctatcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgacttac 128
|||||| | |||| || || | ||||||||||||||||| |||||||||||||||||||
Sbjct: 65 atgaatttgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttac 124
Query: 129 attgtgaaactgagggagtag 149
|||||||||| |||| |||||
Sbjct: 125 attgtgaaacggaggaagtag 145
Score = 123 bits (62), Expect = 8e-28
Identities = 117/133 (87%), Gaps = 3/133 (2%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||||||||||||||||||| || ||||
Sbjct: 137 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttcataaatc 78
Query: 79 tatcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtga 135
|| | || || | ||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 77 tagacaaattcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtga 18
Query: 136 aactgagggagta 148
||| |||||||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 139 bits (70), Expect = 1e-32
Identities = 122/138 (88%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| | ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 72 atgaatctatctattgatag-catcaatatgaatgtggaaaatgctagaatgacttacat 130
||||||||| ||| || | ||||||||||||| ||| |||||||||||||||||||||
Sbjct: 65 atgaatctagatatccattgacatcaatatgaatatgggaaatgctagaatgacttacat 124
Query: 131 tgtgaaactgagggagta 148
|||||||| |||| ||||
Sbjct: 125 tgtgaaacggaggaagta 142
Score = 117 bits (59), Expect = 5e-26
Identities = 114/131 (87%), Gaps = 1/131 (0%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||| |||||||||||||| |||| ||
Sbjct: 135 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtcaatggata 76
Query: 79 tatctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
| | ||| || | ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 138 ctgagggagta 148
| |||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 137 bits (69), Expect = 5e-32
Identities = 121/137 (88%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||||||| ||||||| ||||||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|||||||||| | | || ||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 80 atgaatctataca-tattaacattaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 135 bits (68), Expect = 2e-31
Identities = 117/131 (89%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||||||||||||| |||||||| ||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat--atg 69
Query: 79 tatctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
||| ||| || | |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 70 tatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaa 129
Query: 138 ctgagggagta 148
| |||||||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 135 bits (68), Expect = 2e-31
Identities = 117/131 (89%), Gaps = 3/131 (2%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| ||||||| ||||||| |||| |||||||||||||||||||||||
Sbjct: 133 tccgtttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaatc 74
Query: 79 tatctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
|| ||| || | ||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 73 tag--attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 138 ctgagggagta 148
| |||||||||
Sbjct: 15 cggagggagta 5
Score = 133 bits (67), Expect = 8e-31
Identities = 122/138 (88%), Gaps = 3/138 (2%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| |||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 72 atgaatctatctattga-tagcatcaatatgaatgtggaaaatgctagaatgacttacat 130
||||||||| ||| | || ||||||||||||| ||| |||||||||||||||||||||
Sbjct: 65 atgaatcta--gattcattaacatcaatatgaatatgggaaatgctagaatgacttacat 122
Query: 131 tgtgaaactgagggagta 148
| |||||| |||| ||||
Sbjct: 123 tatgaaacggaggaagta 140
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 135 bits (68), Expect = 2e-31
Identities = 121/137 (88%), Gaps = 5/137 (3%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| || |||| |||||||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
||||||||| || ||| |||||||||||| ||| ||||||||||||||||||||||
Sbjct: 76 atgaatcta--gatagat---atcaatatgaatatgggaaatgctagaatgacttacatt 22
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 113/133 (84%), Gaps = 11/133 (8%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||| |||||||||||| |||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgat--------atc 63
Query: 79 tatcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtga 135
|||||| || || | ||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 64 tatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtga 123
Query: 136 aactgagggagta 148
||| |||||||||
Sbjct: 124 aacggagggagta 136
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 125 bits (63), Expect = 2e-28
Identities = 119/134 (88%), Gaps = 4/134 (2%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| ||||||| ||||||| | |||||| |||||||||||||| ||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaatc 71
Query: 79 ta-tcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtg 134
|| |||| || || | ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 72 tagtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtg 131
Query: 135 aaactgagggagta 148
|||| |||||||||
Sbjct: 132 aaacggagggagta 145
Score = 107 bits (54), Expect = 5e-23
Identities = 117/136 (86%), Gaps = 4/136 (2%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| ||| ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 72 atgaatcta-tcta---ttgatagcatcaatatgaatgtggaaaatgctagaatgactta 127
||||||||| ||| || || ||||||||| |||||| ||||||||||||||||||
Sbjct: 85 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 26
Query: 128 cattgtgaaactgagg 143
|||| |||||| ||||
Sbjct: 25 cattatgaaacggagg 10
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 125 bits (63), Expect = 2e-28
Identities = 117/135 (86%), Gaps = 5/135 (3%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 79 tatctattga-----tagcatcaatatgaatgtggaaaatgctagaatgacttacattgt 133
|| | | || || |||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 72 tagatgtagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgt 131
Query: 134 gaaactgagggagta 148
||||| |||||||||
Sbjct: 132 gaaacggagggagta 146
Score = 107 bits (54), Expect = 5e-23
Identities = 115/132 (87%), Gaps = 5/132 (3%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| ||| ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 72 atgaatcta--tcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgactt 126
||||||||| |||| || || | |||||||||||||||| |||||||||||||||||
Sbjct: 86 atgaatctacatctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 27
Query: 127 acattgtgaaac 138
||||||||||||
Sbjct: 26 acattgtgaaac 15
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 123 bits (62), Expect = 8e-28
Identities = 122/141 (86%), Gaps = 2/141 (1%)
Strand = Plus / Minus
Query: 8 ttactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||||||| ||||||||||||||| ||||||| ||||||| ||||| | ||||||||
Sbjct: 143 ttactactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgat 84
Query: 68 gttaatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgactta 127
|||||| |||||| ||| |||| |||||||| | |||| ||||||||| |||||||||
Sbjct: 83 gttaataaatcta--tatagatactatcaatataattgtgaaaaatgctaaaatgactta 26
Query: 128 cattgtgaaactgagggagta 148
|||||||||| |||||||||
Sbjct: 25 cattgtgaaatggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagta 151
||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 83 catcaatataattgtggaaaatgctagaatgacttacattgtgaaacggagggagtagta 142
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 123 bits (62), Expect = 8e-28
Identities = 119/137 (86%), Gaps = 7/137 (5%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||||||| ||||| |||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatc 71
Query: 79 ta------tctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|| | |||| || | ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 72 tagacatatatattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 131
Query: 132 gtgaaactgagggagta 148
||||||| | |||||||
Sbjct: 132 gtgaaacggggggagta 148
Score = 113 bits (57), Expect = 7e-25
Identities = 117/136 (86%), Gaps = 7/136 (5%)
Strand = Plus / Minus
Query: 20 ccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatct 79
|||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| |
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatat 81
Query: 80 atct------attga-tagcatcaatatgaatgtggaaaatgctagaatgacttacattg 132
|| | ||| | || ||| ||||| ||||||| |||||||||||||||||||||||
Sbjct: 80 atatgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttacattg 21
Query: 133 tgaaactgagggagta 148
|||||| |||| ||||
Sbjct: 20 tgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 121 bits (61), Expect = 3e-27
Identities = 126/147 (85%), Gaps = 8/147 (5%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| || |||||||||||| ||||||| ||||||| | ||||||||||||||||||
Sbjct: 150 ctactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 91
Query: 71 aatgaatctatct-------attgat-agcatcaatatgaatgtggaaaatgctagaatg 122
|||||| |||| | ||| || | |||||||||||||||||||||||||||||||
Sbjct: 90 aatgaaactatgtcacatagattcattaacatcaatatgaatgtggaaaatgctagaatg 31
Query: 123 acttacattgtgaaactgagggagtag 149
||||||||| |||||| |||| |||||
Sbjct: 30 acttacattatgaaacggaggaagtag 4
Score = 113 bits (57), Expect = 7e-25
Identities = 119/139 (85%), Gaps = 8/139 (5%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| ||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaatc 71
Query: 79 tatcta-------ttgat-agcatcaatatgaatgtggaaaatgctagaatgacttacat 130
||| | || || | |||||||||||||||| |||||||||||||||||||||
Sbjct: 72 tatgtgacatagtttcattaacatcaatatgaatgtgagaaatgctagaatgacttacat 131
Query: 131 tgtgaaactgagggagtag 149
|||||||| ||||||||||
Sbjct: 132 tgtgaaaccgagggagtag 150
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 8 ttactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 1 ttactactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgat 60
Query: 68 gttaatgaatcta 80
|||||||||||||
Sbjct: 61 gttaatgaatcta 73
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 151 tccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatc 92
Query: 79 ta 80
||
Sbjct: 91 ta 90
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagta 151
||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 61 catcaatatgaatgtgggtaatgctataatgacttacattgtgaaacggagggagtagta 2
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 119 bits (60), Expect = 1e-26
Identities = 112/127 (88%), Gaps = 3/127 (2%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| | |||||||||||| |||| ||||||||
Sbjct: 131 tccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaatc 72
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| || ||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 71 tagacat--ata-catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 15
Query: 139 tgaggga 145
||||||
Sbjct: 14 ggaggga 8
Score = 97.6 bits (49), Expect = 4e-20
Identities = 108/127 (85%), Gaps = 3/127 (2%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| | ||||||||||||||||| ||| |
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtatatgtcta 71
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| ||||| ||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 72 gattcattga---cataaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 128
Query: 139 tgaggga 145
||||||
Sbjct: 129 ggaggga 135
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 119 bits (60), Expect = 1e-26
Identities = 124/142 (87%), Gaps = 5/142 (3%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| | ||||||||||||| | ||||| ||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 72 atgaatcta--tcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgactt 126
|||||| || |||| || || |||||||||||||||||| ||||||||||||| ||||
Sbjct: 86 atgaatttagatctagattcattagcatcaatatgaatgtgaaaaatgctagaataactt 27
Query: 127 acattgtgaaactgagggagta 148
|||||||||||| |||||||||
Sbjct: 26 acattgtgaaacggagggagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 123/142 (86%), Gaps = 5/142 (3%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||| ||| ||||||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 72 atgaatcta--tcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgactt 126
||||||||| |||| || || ||||||||||| ||||| |||||||||| ||||| ||
Sbjct: 65 atgaatctagatctaaattcattagcatcaatataaatgtagaaaatgctaaaatgattt 124
Query: 127 acattgtgaaactgagggagta 148
|||||||||||| |||||||||
Sbjct: 125 acattgtgaaacggagggagta 146
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 119 bits (60), Expect = 1e-26
Identities = 118/137 (86%), Gaps = 9/137 (6%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||||||| ||||||| |||||||||||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
||||||||| |||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 72 atgaatcta------gata---tcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 111/131 (84%), Gaps = 11/131 (8%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat--------atc 63
Query: 79 tatctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
|| ||| || ||||| ||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 64 tag--attcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 138 ctgagggagta 148
| |||||||||
Sbjct: 122 cggagggagta 132
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 119 bits (60), Expect = 1e-26
Identities = 117/134 (87%), Gaps = 4/134 (2%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta-atgaat 77
||||||||||||||| ||||||||||||||| |||||||||||||||||| || || ||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgatagatagat 71
Query: 78 ctatcta---ttgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtg 134
||||||| || || ||||||||| ||| || |||||||||||||||||||||||||
Sbjct: 72 ctatctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtg 131
Query: 135 aaactgagggagta 148
|||| |||||||||
Sbjct: 132 aaacggagggagta 145
Score = 105 bits (53), Expect = 2e-22
Identities = 121/143 (84%), Gaps = 8/143 (5%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| | || ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 72 atgaatcta------tctattgatagcatcaatatgaatgtggaaaatgctagaatgact 125
|| |||||| ||||| || ||||||||||||||||| |||||||| |||||||
Sbjct: 85 ataaatctagatagatctatctat--catcaatatgaatgtgggaaatgctaaaatgact 28
Query: 126 tacattgtgaaactgagggagta 148
||||||||||||| |||| ||||
Sbjct: 27 tacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 119 bits (60), Expect = 1e-26
Identities = 118/137 (86%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||||||| ||||||| |||||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
||||||||| |||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 65 atgaatcta------gata---tcaatatgaatgtgggaaatgctagaatgacttacatt 115
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 116 gtgaaacggaggaagta 132
Score = 93.7 bits (47), Expect = 7e-19
Identities = 111/131 (84%), Gaps = 11/131 (8%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||
Sbjct: 125 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat--------atc 74
Query: 79 tatctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
|| ||| || ||||| ||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 73 tag--attcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 138 ctgagggagta 148
| |||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 119 bits (60), Expect = 1e-26
Identities = 124/144 (86%), Gaps = 11/144 (7%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 71
Query: 79 ta--------tcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgactta 127
|| |||| || || ||||||||||||||||| | ||||||||||||||||||
Sbjct: 72 tagatatatgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgactta 131
Query: 128 cattgtgaaactgagggagtagta 151
|||||||||| ||||||||||||
Sbjct: 132 tattgtgaaacggagggagtagta 155
Score = 117 bits (59), Expect = 5e-26
Identities = 129/151 (85%), Gaps = 11/151 (7%)
Strand = Plus / Minus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||||| ||||||||||||| | ||||||| ||||||| || |||||||||||||||
Sbjct: 155 tactactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatg 96
Query: 69 ttaatgaatcta--------tcta--ttgat-agcatcaatatgaatgtggaaaatgcta 117
||||||||||| |||| || || ||||||||||||||||||| ||||||||
Sbjct: 95 ctaatgaatctagacatatatctagattcattagcatcaatatgaatgtgggaaatgcta 36
Query: 118 gaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||| |||| ||||
Sbjct: 35 gaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 117 bits (59), Expect = 5e-26
Identities = 114/131 (87%), Gaps = 6/131 (4%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| ||||||| | |||||||||||||||| |||||||||
Sbjct: 128 tccgtttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaatc 69
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
| ||| |||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 68 tc---att---agcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaac 15
Query: 139 tgagggagtag 149
||||||||||
Sbjct: 14 agagggagtag 4
Score = 91.7 bits (46), Expect = 3e-18
Identities = 116/138 (84%), Gaps = 6/138 (4%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| || ||||||| |||| ||||||| ||||||| | |||||||||||||||| |
Sbjct: 4 ctactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgct 63
Query: 71 aatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacat 130
||||| || ||| |||||||||||||||||| |||||||||||||||||| ||
Sbjct: 64 aatgag---attcatt---agcatcaatatgaatgtgagaaatgctagaatgacttatat 117
Query: 131 tgtgaaactgagggagta 148
|||||||| |||| ||||
Sbjct: 118 tgtgaaacggaggaagta 135
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 117 bits (59), Expect = 5e-26
Identities = 116/135 (85%), Gaps = 5/135 (3%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 79 tatctattga-----tagcatcaatatgaatgtggaaaatgctagaatgacttacattgt 133
|| | | || || |||||||| ||| |||||||||||| |||||||||||||||
Sbjct: 72 tagatgtagattcattaatatcaatataaatatggaaaatgctataatgacttacattgt 131
Query: 134 gaaactgagggagta 148
||||| |||||||||
Sbjct: 132 gaaacggagggagta 146
Score = 107 bits (54), Expect = 5e-23
Identities = 115/132 (87%), Gaps = 5/132 (3%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| ||| ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 72 atgaatcta--tcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgactt 126
||||||||| |||| || || | |||||||||||||||| |||||||||||||||||
Sbjct: 86 atgaatctacatctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 27
Query: 127 acattgtgaaac 138
||||||||||||
Sbjct: 26 acattgtgaaac 15
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 117 bits (59), Expect = 5e-26
Identities = 119/139 (85%), Gaps = 10/139 (7%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtta 64
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|||||||| | ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 65 -tgaatcta---------aacatcaatatgaatatggaaaatgctagaatgacttacatt 114
Query: 132 gtgaaactgagggagtagt 150
||||||| |||| ||||||
Sbjct: 115 gtgaaacggaggaagtagt 133
Score = 103 bits (52), Expect = 7e-22
Identities = 116/139 (83%), Gaps = 10/139 (7%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||| | ||||||||||||||| ||||||| ||||||| ||| ||||||||||||||
Sbjct: 133 actacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 74
Query: 70 taatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttaca 129
| | ||| ||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 73 ttag----------attcataacatcaatatgaatgtggaaaatgctagaataacttaca 24
Query: 130 ttgtgaaactgagggagta 148
||||||||| |||||||||
Sbjct: 23 ttgtgaaacggagggagta 5
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 113 bits (57), Expect = 7e-25
Identities = 124/143 (86%), Gaps = 5/143 (3%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 63
Query: 71 aatgaatct--atct--attga-tagcatcaatatgaatgtggaaaatgctagaatgact 125
||||||||| |||| ||| | || ||||||||||||| | | ||||||||||||||||
Sbjct: 64 aatgaatctagatctagattcattaacatcaatatgaatatagtaaatgctagaatgact 123
Query: 126 tacattgtgaaactgagggagta 148
|| |||||| ||| |||| ||||
Sbjct: 124 tatattgtggaacggaggaagta 146
Score = 91.7 bits (46), Expect = 3e-18
Identities = 116/136 (85%), Gaps = 5/136 (3%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
|||||| |||||| | ||||||| ||||||| | | |||||||||||||||||||||||
Sbjct: 139 tccgttccacaatataagtcattctagcatttactatattcatattgatgttaatgaatc 80
Query: 79 ta--tcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgt 133
|| |||| || || | ||||||||||||||||| ||||| || ||||||||||||| |
Sbjct: 79 tagatctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattat 20
Query: 134 gaaactgagggagtag 149
||||| ||||||||||
Sbjct: 19 gaaacggagggagtag 4
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 113 bits (57), Expect = 7e-25
Identities = 124/143 (86%), Gaps = 5/143 (3%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||||||
Sbjct: 147 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 88
Query: 71 aatgaatct--atct--attga-tagcatcaatatgaatgtggaaaatgctagaatgact 125
||||||||| |||| ||| | || ||||||||||||| | | ||||||||||||||||
Sbjct: 87 aatgaatctagatctagattcattaacatcaatatgaatatagtaaatgctagaatgact 28
Query: 126 tacattgtgaaactgagggagta 148
|| |||||| ||| |||| ||||
Sbjct: 27 tatattgtggaacggaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 116/136 (85%), Gaps = 5/136 (3%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
|||||| |||||| | ||||||| ||||||| | | |||||||||||||||||||||||
Sbjct: 12 tccgttccacaatataagtcattctagcatttactatattcatattgatgttaatgaatc 71
Query: 79 ta--tcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgt 133
|| |||| || || | ||||||||||||||||| ||||| || ||||||||||||| |
Sbjct: 72 tagatctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattat 131
Query: 134 gaaactgagggagtag 149
||||| ||||||||||
Sbjct: 132 gaaacggagggagtag 147
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 113 bits (57), Expect = 7e-25
Identities = 115/137 (83%), Gaps = 13/137 (9%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
| ||||| |||||||||||||||||||||||||| ||| | |||||||
Sbjct: 65 a-------------tgataacatcaatatgaatgtggaaaatgctaaaataaattacatt 111
Query: 132 gtgaaactgagggagta 148
||||||| |||||||||
Sbjct: 112 gtgaaacggagggagta 128
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 111 bits (56), Expect = 3e-24
Identities = 123/142 (86%), Gaps = 5/142 (3%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||| ||| || ||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 72 atgaatcta--tcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgactt 126
||||||||| |||| || || ||||||||||||||||| |||||||||||||||| ||
Sbjct: 65 atgaatctagatctaaattcattagcatcaatatgaatgtagaaaatgctagaatgattt 124
Query: 127 acattgtgaaactgagggagta 148
|||||||||||| |||||||||
Sbjct: 125 acattgtgaaacggagggagta 146
Score = 103 bits (52), Expect = 7e-22
Identities = 122/142 (85%), Gaps = 5/142 (3%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| | ||||| ||||||| | ||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 72 atgaatcta--tcta--ttgat-agcatcaatatgaatgtggaaaatgctagaatgactt 126
|||||| || |||| || || ||||||||||| ||| || ||||| ||||||||||||
Sbjct: 86 atgaatttagatctagattcattagcatcaatataaatatgaaaaatactagaatgactt 27
Query: 127 acattgtgaaactgagggagta 148
|||||||||||| |||||||||
Sbjct: 26 acattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 130/157 (82%), Gaps = 17/157 (10%)
Strand = Plus / Minus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||| | ||||||||||||||| ||||||| ||||||| ||||||||||||||||||
Sbjct: 161 tactacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 102
Query: 69 ttaatgaatc------------tatctattga-----tagcatcaatatgaatgtggaaa 111
|||||||||| ||| ||| || || ||||||||||||| ||||||
Sbjct: 101 ttaatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaa 42
Query: 112 atgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||| |||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagta 151
||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 102 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtagta 161
Query: 152 t 152
|
Sbjct: 162 t 162
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 111 bits (56), Expect = 3e-24
Identities = 110/130 (84%), Gaps = 11/130 (8%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| | ||||||||||||| |||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatgaata 71
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
||| ||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 72 tatatat-----------atatgaatatggaaaatgctagaatgacttacattgtgaaac 120
Query: 139 tgagggagta 148
|||||||||
Sbjct: 121 ggagggagta 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 95 caatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 58 caatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 111 bits (56), Expect = 3e-24
Identities = 110/130 (84%), Gaps = 11/130 (8%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 123 tccgtttcacaatataagtcattttagtattttccacattcatattgatgttaatgaatc 64
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| |||||||||||||||||||||| | | ||||||||||||||||||||
Sbjct: 63 ta-----------catcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaac 15
Query: 139 tgagggagta 148
|||||||||
Sbjct: 14 ggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||||||||| ||| ||||||||| |||||||||| |||| ||||
Sbjct: 74 catcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggaggaagta 130
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 111 bits (56), Expect = 3e-24
Identities = 110/130 (84%), Gaps = 11/130 (8%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||| |
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatgagt- 65
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| |||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 64 ----------taacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Query: 139 tgagggagta 148
|||||||||
Sbjct: 14 ggagggagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 113/137 (82%), Gaps = 11/137 (8%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
| || || |||| |||||||||||| ||||||||||||||||||||||
Sbjct: 65 actcat-----------taacatcgatatgaatgtgggaaatgctagaatgacttacatt 113
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 114 gtgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 111 bits (56), Expect = 3e-24
Identities = 113/131 (86%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||| | ||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 132 tccgtttcataatataagtcattctaacattttccacattcatattgatgttaatgaatc 73
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| || ||| |||||| || |||||| ||||||||||||||||||||||| ||||||
Sbjct: 72 tagacat--ataacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaac 15
Query: 139 tgagggagtag 149
||||||||||
Sbjct: 14 ggagggagtag 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||||||||||||||| |||||||||||| ||| |||||| |||| |||||
Sbjct: 83 catcaatatgaatgtggaaaatgttagaatgacttatattatgaaacggaggaagtag 140
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 101
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 100 taatgaatcta 90
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 102 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtagt 160
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 109 bits (55), Expect = 1e-23
Identities = 115/139 (82%), Gaps = 17/139 (12%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 63
Query: 71 aatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacat 130
||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 64 aatgaatct-----------------atatgaatgtgggaaatgctagaatgacttacat 106
Query: 131 tgtgaaactgagggagtag 149
|||||||| ||||||||||
Sbjct: 107 tgtgaaacggagggagtag 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 catctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 109 bits (55), Expect = 1e-23
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtagt 3
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 109 bits (55), Expect = 1e-23
Identities = 111/130 (85%), Gaps = 6/130 (4%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||||||||||||| || ||||||||||
Sbjct: 128 tccgtttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaatc 69
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| || || ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 68 tagacatatat------aatatgaatgtgggaaatgctagaatgacttacattgtgaaat 15
Query: 139 tgagggagta 148
|||||||||
Sbjct: 14 ggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 83 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 135
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 109 bits (55), Expect = 1e-23
Identities = 117/137 (85%), Gaps = 3/137 (2%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| | | ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
||||||||| ||| || ||||||||||||||| | |||| |||||||||||| |||
Sbjct: 65 atgaatctagatat---taacatcaatatgaatgtaggaaatagtagaatgacttatatt 121
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 122 gtgaaacggaggaagta 138
Score = 97.6 bits (49), Expect = 4e-20
Identities = 113/131 (86%), Gaps = 5/131 (3%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| || ||| || |||||||||||||||||||| |||
Sbjct: 131 tccgtttcacaatataagtcattctactatttcctacattcatattgatgttaat--atc 74
Query: 79 tatctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
|| ||| || | ||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 73 tag--attcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 138 ctgagggagta 148
| |||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 107 bits (54), Expect = 5e-23
Identities = 128/153 (83%), Gaps = 16/153 (10%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 72 atgaatc------tatctat-tgatag---------catcaatatgaatgtggaaaatgc 115
||||||| ||| ||| || ||| ||||||||||||||||| ||||||
Sbjct: 97 atgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 116 tagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||| |||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 121/146 (82%), Gaps = 16/146 (10%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 79 t---------atctattga-------tagcatcaatatgaatgtggaaaatgctagaatg 122
| || | || | || ||||||||||||||||| |||||||||||||
Sbjct: 72 tagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgctagaatg 131
Query: 123 acttacattgtgaaactgagggagta 148
|||||||||||||||| |||||||||
Sbjct: 132 acttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 107 bits (54), Expect = 5e-23
Identities = 110/128 (85%), Gaps = 3/128 (2%)
Strand = Plus / Plus
Query: 22 gtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatctat 81
|||||| ||| | ||||||| ||||||| ||||||||||| ||||| |||||||||||
Sbjct: 15 gtttcataatataagtcattctagcattttccacattcatactgatgctaatgaatctag 74
Query: 82 ctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactga 141
|| ||| ||||||||||||||||| |||||||| ||||||||||||| |||||| ||
Sbjct: 75 atagtga---catcaatatgaatgtgggaaatgctacaatgacttacattatgaaacgga 131
Query: 142 gggagtag 149
||||||||
Sbjct: 132 gggagtag 139
Score = 105 bits (53), Expect = 2e-22
Identities = 120/139 (86%), Gaps = 5/139 (3%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||| ||||| ||||||| ||||||| |||||||||||||||||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgtc 80
Query: 71 aatgaatctatctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttaca 129
| | ||||| ||| || ||||||| |||||||||||||||||||||||||||||| |
Sbjct: 79 act--atctag--attcattagcatcagtatgaatgtggaaaatgctagaatgacttata 24
Query: 130 ttgtgaaactgagggagta 148
|| |||||| |||| ||||
Sbjct: 23 ttatgaaacagaggaagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 107 bits (54), Expect = 5e-23
Identities = 121/142 (85%), Gaps = 11/142 (7%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| || |||| ||||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatc 71
Query: 79 ta--------tcta--ttgatag-catcaatatgaatgtggaaaatgctagaatgactta 127
|| |||| || || | ||||||||||||||||| ||||||||||||||||||
Sbjct: 72 tagacatctgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgactta 131
Query: 128 cattgtgaaactgagggagtag 149
|||| |||||| ||||||||||
Sbjct: 132 cattatgaaacggagggagtag 153
Score = 105 bits (53), Expect = 2e-22
Identities = 126/149 (84%), Gaps = 11/149 (7%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||| ||||| ||||||| ||||||| |||||||||||||||||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtc 94
Query: 71 aatgaatcta--------tct--attgatag-catcaatatgaatgtggaaaatgctaga 119
|||||||||| ||| ||| || | ||||||||||||||||| ||||| ||||
Sbjct: 93 aatgaatctagacagatgtctagattcattgacatcaatatgaatgtgggaaatgataga 34
Query: 120 atgacttacattgtgaaactgagggagta 148
||||||||||||||||||| |||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 128/155 (82%), Gaps = 17/155 (10%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| ||||||| ||||||| |||||||||||| |||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 63
Query: 71 aatgaatc----------tatctattga-------tagcatcaatatgaatgtggaaaat 113
|||||||| |||||||| | || |||||||||||||||||||||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaat 123
Query: 114 gctagaatgacttacattgtgaaactgagggagta 148
| ||||||||||||||||||||||| |||||||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 catcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| || |||| |||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 118/137 (86%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| |||| ||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
||||||||| | ||| ||| || |||||| ||| ||||||||||||||||||||||
Sbjct: 79 atgaatctagaca-agat-tcattaacatgaatatgggaaatgctagaatgacttacatt 22
Query: 132 gtgaaactgagggagta 148
|||||| |||| ||||
Sbjct: 21 atgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 83 catcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagta 139
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 105 bits (53), Expect = 2e-22
Identities = 119/138 (86%), Gaps = 6/138 (4%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattt-tagcattacccacattcatattgatgtt 70
|||||| ||||||||||||||| |||| | || |||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 71 aatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacat 130
|||||||||| || |||| ||||||||||| ||| |||||||||||||||||||||
Sbjct: 65 aatgaatctagata--gata---tcaatatgaatatgggaaatgctagaatgacttacat 119
Query: 131 tgtgaaactgagggagta 148
|||||||| |||| ||||
Sbjct: 120 tgtgaaacggaggaagta 137
Score = 67.9 bits (34), Expect = 4e-11
Identities = 111/134 (82%), Gaps = 12/134 (8%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||| |||||||||||| |||
Sbjct: 130 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgat--------atc 79
Query: 79 tatct--attga-tagcatcaatatgaatgtggaaaatgctaga-atgacttacattgtg 134
||||| ||| | || ||||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 78 tatctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtg 19
Query: 135 aaactgagggagta 148
|||| |||||||||
Sbjct: 18 aaacggagggagta 5
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 105 bits (53), Expect = 2e-22
Identities = 112/130 (86%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| ||||||| ||||||||||||||||| || || |
Sbjct: 129 tccgtttcacaatataagtcattctagcatttcccacattcatattgatatttatctaa- 71
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| |||| ||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 70 -atttattaata---tcaatataaatgtggaaaatgctagaatgacttacattgtgaaac 15
Query: 139 tgagggagta 148
|||||||||
Sbjct: 14 ggagggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 115/137 (83%), Gaps = 5/137 (3%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| ||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|| ||| || || | |||||||||||||||| |||||||||||||||||| |||
Sbjct: 65 ataaatttagata-----aatatcaatatgaatgtgggaaatgctagaatgacttatatt 119
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 120 gtgaaacggaggaagta 136
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 118/137 (86%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| |||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
||||||||| | ||| ||| || |||||| ||| ||||||||||||||||||||||
Sbjct: 65 atgaatctagaca-agat-tcattaacatgaatatgggaaatgctagaatgacttacatt 122
Query: 132 gtgaaactgagggagta 148
|||||| |||| ||||
Sbjct: 123 atgaaacggaggaagta 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 102 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 105 bits (53), Expect = 2e-22
Identities = 116/137 (84%), Gaps = 5/137 (3%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| |||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|| ||| || || | |||||||||||||||| |||||||||||||||||| |||
Sbjct: 65 ataaatttagata-----aatatcaatatgaatgtgggaaatgctagaatgacttatatt 119
Query: 132 gtgaaactgagggagta 148
||||||| |||| ||||
Sbjct: 120 gtgaaacggaggaagta 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 111/130 (85%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| ||||||| ||||||||||||||||| || || |
Sbjct: 129 tccgtttcacaatataagtcattctagcatttcccacattcatattgatatttatctaa- 71
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| |||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 70 -atttattaata---tcaatataaatgtgggaaatgctagaatgacttacattgtgaaac 15
Query: 139 tgagggagta 148
|||||||||
Sbjct: 14 ggagggagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 105 bits (53), Expect = 2e-22
Identities = 117/138 (84%), Gaps = 9/138 (6%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| |||||| |||||||| ||||||| ||||||| |||| ||| ||||||||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
||||||||| || ||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 65 atgaatcta------ga---catcaatatgaatgtgggaaatgctagaatgtcttacatt 115
Query: 132 gtgaaactgagggagtag 149
||||||| |||| |||||
Sbjct: 116 gtgaaacggaggaagtag 133
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||| ||| ||| |||||||| |||||||||||||||| ||| |||||||||
Sbjct: 64 tagcatcaatataaatatgggaaatgctataatgacttacattgtggaacggagggagta 5
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 99 tagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||| |||||||| | ||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 64 tagcatctatatgaatatagaaaatgttagaatgacttacattgtgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| |||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 72 atgaat 77
||||||
Sbjct: 98 atgaat 93
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 103 bits (52), Expect = 7e-22
Identities = 121/143 (84%), Gaps = 7/143 (4%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||| ||||| ||||||| ||| ||| |||| ||||||||||||| |
Sbjct: 137 ctactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgct 78
Query: 71 aatgaatctatctattga-tagcatcaatatgaatgtggaaaatgctagaatgacttaca 129
|||||||||| || |||||||||||||||| || |||| ||||||| |||||||
Sbjct: 77 aatgaatcta------gactagcatcaatatgaatatgagaaatactagaattacttaca 24
Query: 130 ttgtgaaactgagggagtagtat 152
||||||||| |||| ||||||||
Sbjct: 23 ttgtgaaacggaggaagtagtat 1
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| ||| |||| ||||||||||||||||| |||||| |||||||||
Sbjct: 77 tagcatcaatatgaatatgggaaatactagaatgacttacattatgaaacggagggagta 136
Query: 149 g 149
|
Sbjct: 137 g 137
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 103 bits (52), Expect = 7e-22
Identities = 119/142 (83%), Gaps = 12/142 (8%)
Strand = Plus / Plus
Query: 8 ttactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||||| | ||||||||||||||| ||||||| ||||||| ||| ||||||||||||
Sbjct: 1 ttactacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 60
Query: 68 gttaatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgactta 127
|||||||||| || ||||||||||||| ||||||||||||||||||||||
Sbjct: 61 gttaatgaat-ta-----------catcaatatgaatatggaaaatgctagaatgactta 108
Query: 128 cattgtgaaactgagggagtag 149
|||| |||||| ||| ||||||
Sbjct: 109 cattatgaaacggagagagtag 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagta 151
||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 61 catcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtagta 2
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 103 bits (52), Expect = 7e-22
Identities = 113/132 (85%), Gaps = 6/132 (4%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| ||||||| |||||||||| |||||| ||||||||||
Sbjct: 128 tccgtttcacaatataagtcattctagcatttcccacattcacattgatattaatgaatc 69
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
| ||| ||| ||||| |||||||| |||||||||||||||||| ||||||||||
Sbjct: 68 tc---attaata---tcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaac 15
Query: 139 tgagggagtagt 150
|||||||||||
Sbjct: 14 ggagggagtagt 3
Score = 87.7 bits (44), Expect = 4e-17
Identities = 117/140 (83%), Gaps = 6/140 (4%)
Strand = Plus / Plus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| ||||||||||||| | ||||||| ||||||| | |||||||| |||||| |
Sbjct: 3 actactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatat 62
Query: 70 taatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttaca 129
|||||| || ||| ||| ||||| ||||||||| |||||||||||||||||| |
Sbjct: 63 taatgag---attcattaata---tcaatgtgaatgtgggaaatgctagaatgacttata 116
Query: 130 ttgtgaaactgagggagtag 149
||||||||| |||| |||||
Sbjct: 117 ttgtgaaacggaggaagtag 136
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||| |||||
Sbjct: 165 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatg 106
Query: 69 ttaatgaatcta 80
||||||||||||
Sbjct: 105 ttaatgaatcta 94
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagta 151
||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 106 catcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtagta 165
Query: 152 t 152
|
Sbjct: 166 t 166
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 110 aaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||||| |||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 103 bits (52), Expect = 7e-22
Identities = 120/143 (83%), Gaps = 6/143 (4%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||||||| ||| | |||||||||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 72 atgaatcta------tctattgatagcatcaatatgaatgtggaaaatgctagaatgact 125
||||||||| || | || ||||||||| |||||| |||| ||| |||||||
Sbjct: 87 atgaatctagacaacattaatattaacatcaatataaatgtgacaaatactaaaatgact 28
Query: 126 tacattgtgaaactgagggagta 148
||||||||||||| |||||||||
Sbjct: 27 tacattgtgaaacagagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| |||| ||| |||||||||||||||||||| |||||||||
Sbjct: 91 catcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacggagggagta 147
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 catcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 96 catcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 90 agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 63 agcatcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Query: 150 ta 151
||
Sbjct: 3 ta 2
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 8 ttactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||||||| ||||||||||||||| ||||||| ||||||| ||||| |||||||||||
Sbjct: 1 ttactactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgat 60
Query: 68 g 68
|
Sbjct: 61 g 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 104 tgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||| |||||||||||||| ||||||||| |||| |||||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagggagta 107
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 61 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 123 acttacattgtgaaactgagggagta 148
|||||||||||||||| |||||||||
Sbjct: 82 acttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 99.6 bits (50), Expect = 1e-20
Identities = 118/140 (84%), Gaps = 3/140 (2%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| || |||||| ||||| ||||||| ||| ||| |||||||||||| ||||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 72 atgaatctatctattgatag---catcaatatgaatgtggaaaatgctagaatgacttac 128
|| |||||| ||| ||| ||||| |||||||||| ||||||||||||||||||||
Sbjct: 84 ataaatctagatatatatattaacatcactatgaatgtgaaaaatgctagaatgacttac 25
Query: 129 attgtgaaactgagggagta 148
||| |||||| |||| ||||
Sbjct: 24 attatgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 112/133 (84%), Gaps = 3/133 (2%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| ||||||| ||||||| |||||||||| |||||||||| ||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgttaatatata 71
Query: 79 tatcta---ttgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtga 135
|||||| || || ||||| ||||||||||| |||| ||||||||||||||||| |||
Sbjct: 72 tatctagatttattaacatcactatgaatgtgggaaatactagaatgacttacattatga 131
Query: 136 aactgagggagta 148
||| |||||||||
Sbjct: 132 aacagagggagta 144
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 96 catcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggagggagtag 153
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 110/130 (84%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
|||||||||||||| ||||||||||||||| |||| |||||||||||||||||| ||||
Sbjct: 129 tccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaatc 70
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| ||| ||| ||| ||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 69 tagacatttata-----aatgtgaatgtgggaaatactagaataacttacattgtgaaac 15
Query: 139 tgagggagta 148
|||| ||||
Sbjct: 14 ggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| ||| |||||||| |||||||| ||||||||||| |||| ||||
Sbjct: 80 catcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacggaggaagta 136
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
||||||| ||||||||||||||| ||| ||| ||||||| ||||||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||| ||||||||||||||| ||| ||| ||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 95 caatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 58 caatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||||| ||||||||| ||||| ||||||| | |||| ||||||||||||||||||
Sbjct: 161 tactactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatg 102
Query: 69 ttaatgaatcta 80
|||||||||||
Sbjct: 101 gtaatgaatcta 90
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||||||||||||||| |||| ||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 72 atgaatcta 80
|||||||||
Sbjct: 89 atgaatcta 81
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| ||| |||||||| ||||||||| |||||||||| |||||||||
Sbjct: 93 catcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| |||||| |||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 72 atgaatcta 80
|||||||||
Sbjct: 96 atgaatcta 88
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 100 catcaatatgaatgtgggaaatgctagaatgacttacattgtggaacggagggagta 156
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 99 tagcatcaatatgaatgtggtaaatgttagaatgacttacattgtgaaacggagggagta 158
Query: 149 g 149
|
Sbjct: 159 g 159
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| ||||||| || |||| ||||||||||||||||| |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgct 100
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||| |||||||||||||||||| |||||||||| |||| ||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 111/131 (84%), Gaps = 7/131 (5%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| || |||| ||| ||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacattttccatattcatattgatgttaatgaatg 71
Query: 79 tatctattgatag-catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
|| ||||| ||||||||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 72 ta------gatagtcatcaatatgaatatgaaaaatactaaaatgacttacattatgaaa 125
Query: 138 ctgagggagta 148
| |||||||||
Sbjct: 126 cggagggagta 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| ||||||||| ||||||||||||||||||||||| |||| ||||
Sbjct: 61 catcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||||| ||||||||| ||||| ||||||| ||||||| || |||||||||||||||
Sbjct: 126 tactactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatg 67
Query: 69 ttaatgaatcta 80
||||||||||||
Sbjct: 66 ttaatgaatcta 55
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagta 151
||||||||||||||| | |||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 67 catcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggagggagtagta 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcatt 49
||||||||||||||| ||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| |||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
|||||||||||| ||||| |||||||||||||||| || ||| || ||||||||
Sbjct: 56 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagtagt 3
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 95.6 bits (48), Expect = 2e-19
Identities = 80/90 (88%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 37 tcattttagcattacccacattcatattgatgttaatgaatctatctattgatagcatca 96
||||| ||||||| |||||||||||||||||| ||||||||| || || ||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatcgattcat---tagcatca 31
Query: 97 atatgaatgtggaaaatgctagaatgactt 126
|||||||||||| |||||||||||||||||
Sbjct: 30 atatgaatgtgggaaatgctagaatgactt 1
Score = 93.7 bits (47), Expect = 7e-19
Identities = 79/89 (88%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 35 agtcattttagcattacccacattcatattgatgttaatgaatctatctattgatagcat 94
||||||| ||||||| |||||||||||||||||| ||||||||| || || ||||||
Sbjct: 2 agtcattctagcatttcccacattcatattgatgctaatgaatcgattcat---tagcat 58
Query: 95 caatatgaatgtggaaaatgctagaatga 123
|||||||||||||| ||||||||||||||
Sbjct: 59 caatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 67.9 bits (34), Expect = 4e-11
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
||||||| ||||||||||||||| ||| ||| ||||||| ||||||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||| ||||||||||||||| ||| ||| ||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 95.6 bits (48), Expect = 2e-19
Identities = 123/148 (83%), Gaps = 10/148 (6%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||||||| || ||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 72 atgaatcta--tctattga--------tagcatcaatatgaatgtggaaaatgctagaat 121
||||| ||| |||||| | || ||||||||| ||||||| |||| |||||||
Sbjct: 65 atgaaactacatctatttaagtttcattaacatcaatataaatgtgggaaatactagaat 124
Query: 122 gacttacattgtgaaactgagggagtag 149
||||||||||||||||| |||| |||||
Sbjct: 125 gacttacattgtgaaacggaggaagtag 152
Score = 77.8 bits (39), Expect = 4e-14
Identities = 116/140 (82%), Gaps = 10/140 (7%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||| ||| |||||||| ||||||||||||||||| |
Sbjct: 144 tccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgttaatgaaac 85
Query: 79 t-------atcta--ttga-tagcatcaatatgaatgtggaaaatgctagaatgacttac 128
| || || || | || ||||||||||||||||| |||| ||||||||||||
Sbjct: 84 ttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaatgacttat 25
Query: 129 attgtgaaactgagggagta 148
|||||||||| |||||||||
Sbjct: 24 attgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 8 ttactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||||| | ||||||||||||||| ||||||||||||||| ||||||||||| | |||
Sbjct: 1 ttactacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagat 60
Query: 68 gttaatgaatc 78
|||||||||||
Sbjct: 61 gttaatgaatc 71
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| |||| ||||||||||||||| ||||||||||| |||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 72 atgaatctat 81
||||||||||
Sbjct: 96 atgaatctat 87
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 99 atgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagta 151
|||||||||| |||||||| |||||||||||||||||||| |||| |||||||
Sbjct: 54 atgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtagta 2
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 93.7 bits (47), Expect = 7e-19
Identities = 113/133 (84%), Gaps = 4/133 (3%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc 71
Query: 79 tatctattgatag---catcaatatgaatgtggaaaatgctagaatgacttacattgtga 135
|| || ||| ||| || || ||| | ||||||||||||||||||||||||||||
Sbjct: 72 taaacatatctagattcattaacatcaatat-gaaaatgctagaatgacttacattgtga 130
Query: 136 aactgagggagta 148
||| ||| |||||
Sbjct: 131 aacggagagagta 143
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||||||||| ||||| ||||||||||||||||||||||| ||| ||||||
Sbjct: 61 catcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggagagagtag 4
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 93.7 bits (47), Expect = 7e-19
Identities = 119/141 (84%), Gaps = 4/141 (2%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| ||||||| ||||||| | || ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 72 atgaatctatctattgatagc-atc---aatatgaatgtggaaaatgctagaatgactta 127
||||||||| || ||| | ||| | ||||||||||| ||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattatgaatgtgggaaatgctagaatgactta 124
Query: 128 cattgtgaaactgagggagta 148
|||||| |||| |||| ||||
Sbjct: 125 cattgtaaaacggaggaagta 145
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| || |||||||||||||||||||||| |||||| |||||||||
Sbjct: 61 catcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcata 62
||||||| ||||||| ||||||| ||||||| ||||||||||||
Sbjct: 138 tccgttttacaatgtaagtcattctagcatttcccacattcata 95
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| ||||
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgt 101
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 100 taatgaatcta 90
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
|||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 106 aatatgaatgtggagaatgctagaatgacttacattgtgaaacggagggagtagt 160
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| |||||||| |||||||||||||||||||| |||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 93.7 bits (47), Expect = 7e-19
Identities = 110/130 (84%), Gaps = 7/130 (5%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| |||| || ||||||| ||| ||||||||| |||||||||||||
Sbjct: 127 tccgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaatgaatc 68
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| ||| | || |||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 67 ta------gat-gaatatatatgaatgtggaaaatgatagaatgacttacattatgaaac 15
Query: 139 tgagggagta 148
|||||||||
Sbjct: 14 ggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||| ||||||||||||||| ||||||||||||||||| |||| ||||
Sbjct: 82 aatatgaatatggaaaatgctagaaggacttacattgtgaaacggaggaagta 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatat 63
|||||| ||||||||| ||||| ||||||| || |||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| ||||||| |||||| |||| |||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||||| ||| ||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagtag 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| ||||||| ||||||| |||||| |||||||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattctagcatt--tcacatttatattgatgtt 100
Query: 71 aatgaatctat 81
||| |||||||
Sbjct: 99 aataaatctat 89
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||| ||||||||| ||||||| ||||||| ||||||||||||||||| ||
Sbjct: 159 ctactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatt 100
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||||||||||||| |||||||||||||||||||||||||| || ||||||||||
Sbjct: 103 atcaatatgaatgtgggaaatgctagaatgacttacattgtgatacggagggagtag 159
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||| ||||||| |||||| | |||||||||||||||||||| |||| ||||
Sbjct: 61 catcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| ||||||||||||||| | ||||| |||||||||| |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgct 100
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 99 tagcatcaatatggatgtgagaaatgctaaaatgacttacattgtgaaacggagggagta 158
Query: 149 g 149
|
Sbjct: 159 g 159
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 98 tatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 55 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||||||||||| | || ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||||| ||||||||||||| | ||||||||||| ||| |||||||| |||||||||
Sbjct: 161 tactactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatg 102
Query: 69 ttaatgaatcta 80
|||||||||||
Sbjct: 101 gtaatgaatcta 90
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 94 tcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| | |||||||||||||||||||| |||||||||| |||||||||
Sbjct: 99 tagcatcaatatgaatatagaaaatgctagaatgacttatattgtgaaacggagggagta 158
Query: 149 gt 150
||
Sbjct: 159 gt 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 61 catcaatacgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| ||||||||||||| | ||||||| ||||||| | | |||||||||||||
Sbjct: 160 actactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgc 101
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 100 taatgaatcta 90
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| ||||||| ||||||| |||||||| |||||| ||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtt 63
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 95 caatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 58 caatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| |||||| |||||| | ||||||| ||||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 91 gcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 62 gcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| ||||||| ||||||| |||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| ||||| | ||| |||||||||||||||| |||||| |||||||||
Sbjct: 99 tagcatcaatatggatgtgaacaatagtagaatgacttacattatgaaacggagggagta 158
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| ||||||| || ||| ||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 91.7 bits (46), Expect = 3e-18
Identities = 117/141 (82%), Gaps = 11/141 (7%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||||||||||| | |||||| | ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaatgaatt 71
Query: 79 ta------tctattgat-----agcatcaatatgaatgtggaaaatgctagaatgactta 127
|| ||| | ||| ||||||||||| |||||||||||||||| |||||||||
Sbjct: 72 tagatatatctctagattcattagcatcaatataaatgtggaaaatgctaaaatgactta 131
Query: 128 cattgtgaaactgagggagta 148
|||||||||| |||||||||
Sbjct: 132 tattgtgaaacggagggagta 152
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||||||||||||||| ||||||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 72 atgaatcta 80
|||||||||
Sbjct: 92 atgaatcta 84
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattacccatattcatatggatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| | |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 106 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||| ||| |||||||||||||||||||||||||||| |||| ||||
Sbjct: 61 catccatatgaatatgggtaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 91 gcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 62 gcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||| ||||| ||||| ||||| ||||||||||||||||| |||||| |||||||||
Sbjct: 99 tagcatcgatatggatgtgaaaaatactagaatgacttacattatgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| ||||||| ||||||| |||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| ||||||| ||| ||| ||||| ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| ||||||| |||||| |||| |||||||||||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 97 aatgaatcta 88
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||||| ||| ||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 100 catcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagtag 157
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| ||||||| ||||||| |||||| |||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatt--tcacatttatattgatgtt 61
Query: 71 aatgaatctat 81
||| |||||||
Sbjct: 62 aataaatctat 72
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
|||||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 151 tccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaatc 92
Query: 79 ta 80
||
Sbjct: 91 ta 90
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| |||||||||||| || ||||||||| ||||| |||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||||||||||||| || |||||||||||||||||||||||||| ||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagtag 124
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||||||| ||||| ||||||||||||| |||||| |||| ||||
Sbjct: 61 catcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
||||||| || |||||||||||| ||||||| ||||| | |||||||||||||||||
Sbjct: 124 ctactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||||||| ||||||| ||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| |||||||||||||||||| |||||||||| |||||||||
Sbjct: 103 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagtat 152
||||||||||||||||| | |||||||||||| |||||||||| |||| ||||||||
Sbjct: 57 aatatgaatgtggaaaaagttagaatgacttatattgtgaaacggaggaagtagtat 1
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||| | ||||||||||||| | ||||||| || | || ||||||||||||| |||
Sbjct: 2 tactacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatg 61
Query: 69 ttaatgaatcta 80
||||||||||||
Sbjct: 62 ttaatgaatcta 73
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| || |||| ||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 107 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| | ||||||||||| |||||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttctcacattcatatattagttaatgaatc 92
Query: 79 ta 80
||
Sbjct: 91 ta 90
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 89.7 bits (45), Expect = 1e-17
Identities = 89/102 (87%), Gaps = 5/102 (4%)
Strand = Plus / Minus
Query: 35 agtcattttagcattacccacattcatattgatgttaatgaatcta----tctattgat- 89
||||||| ||||||| | |||||||||||||||| ||||||||||| | |||| ||
Sbjct: 102 agtcattctagcatttctcacattcatattgatgctaatgaatctagacatatattcatt 43
Query: 90 agcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 42 agcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 79.8 bits (40), Expect = 1e-14
Identities = 88/104 (84%), Gaps = 5/104 (4%)
Strand = Plus / Plus
Query: 29 aatgttagtcattttagcattacccacattcatattgatgttaatgaatctatctattga 88
||||| ||||||| ||||||| | |||||||||||||||| |||||||| ||| | | ||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaatatatgtctaga 60
Query: 89 t-----agcatcaatatgaatgtggaaaatgctagaatgactta 127
| |||||||||||||||||| ||||||||||||||||||
Sbjct: 61 ttcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 113/139 (81%), Gaps = 15/139 (10%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||| | ||||||||||||||| ||||||| ||||||| || |||||||||||||| |
Sbjct: 128 actacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatat 69
Query: 70 taatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttaca 129
|||||||| ||| ||||||| |||| ||||||||||||||||||||
Sbjct: 68 taatgaatatat---------------atatgaacgtgggaaatgctagaatgacttaca 24
Query: 130 ttgtgaaactgagggagta 148
||||||||| |||||||||
Sbjct: 23 ttgtgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
|||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 71 atcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaagtagt 128
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| ||||||| |||||||||||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaat 77
||||||||| ||||| ||||||| ||||||| ||||||| ||||| |||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaat 70
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||| ||| ||||||||||||||||||||| |||||| |||||||||
Sbjct: 102 catctatatgaatatgggtaatgctagaatgacttacattatgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||| ||||| |||||| ||||||||||||||||||||| |||||| |||| |||||
Sbjct: 61 catctatatgtatgtgggcaatgctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| ||||||||||||||| ||||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||| | ||||||||| ||||| ||||||| |||| ||||||| || ||||| |||||
Sbjct: 3 actacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgt 62
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||||||| ||||||| ||||||||||||| |||||| |||||||||
Sbjct: 102 catctatatgaatgtgggcaatgctaaaatgacttacattatgaaacggagggagta 158
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 114 gctagaatgacttacattgtgaaactgagggagtagt 150
|||||||||||||||||| |||||| |||| ||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagtagt 3
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| ||||||| |||||||||| |||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||||| | ||||||||||||||||||||| |||||| |||||||||
Sbjct: 61 catctatatgaatgttggtaatgctagaatgacttacattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaat 77
||||||||| ||||| ||||||| ||||||| ||||||| |||| |||||||||||||
Sbjct: 151 tccgtttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaat 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||| |||||| |||| ||||
Sbjct: 121 aatgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 101 catcaatatgaatgtggaaaatattagaatgacttacattgtgaaacggagggagta 157
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| || ||| ||||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 72 atgaatcta 80
|||||||||
Sbjct: 97 atgaatcta 89
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||| ||||||| ||| ||| ||| || ||||||||||||||||| |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagtttt-cccacattcatattgatatta 63
Query: 72 atgaatcta 80
|||||||||
Sbjct: 64 atgaatcta 72
Score = 56.0 bits (28), Expect = 1e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| ||| ||||||| ||||||||||| |||| |||||||||
Sbjct: 59 atcaatatgaatgtgggaaaa-ctagaataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| || |||| | |||||||||||||||||||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||| |||||| | ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 103 atcaacatgaatttagaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||
Sbjct: 61 catcaatatgaatgtgagaaatggtagaatgacttacattgtgaaacggaaggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| | | |||||| ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| || |||| ||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||
Sbjct: 103 atcaatatgaatgtgaaaaatactagaatgacttacattgtgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||| ||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 102 catctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||| ||| |||||||||| |||| | ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 102 catcaatatgaatgcggaatatgctagaatgacttacattgtgaaacggagggagta 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| || | |||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| |||||| || |||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 72 atgaat 77
||||||
Sbjct: 98 atgaat 93
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| | | ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 61 catcaatatgaatataggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 61 catcaatatggatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||| ||| ||||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacatccatattgatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 95 caatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||| |||| |||||||||||||||||||||||| |||||||||
Sbjct: 105 caatatgaatgtgggaaatactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||| ||| |||||| ||||||||||||||||||||||| |||||||||
Sbjct: 72 tagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacggagggagta 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| || |||| ||| |||||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 72 atgaatcta 80
|||||||||
Sbjct: 71 atgaatcta 63
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| |||||||||||||||||| |||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||| ||||||||||||| | ||||||| ||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 94 tcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 23 tttcacaatgttagtcattttagcattacccacattcatattga 66
||||||||| | ||||||| ||||||| ||||||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 116/140 (82%), Gaps = 4/140 (2%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| ||| ||| ||||||| |||||||||||| |||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|| | ||||| |||||||| || ||||||||| ||||||||||| |||||||||
Sbjct: 77 ataa----atctagacatagcatctatgtgaatgtgggcaatgctagaataacttacatt 22
Query: 132 gtgaaactgagggagtagta 151
|||||| |||| |||||||
Sbjct: 21 atgaaacggaggaagtagta 2
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| ||||||||||||| ||||||||||| ||||||||| |||||| |||||||||
Sbjct: 81 catctatatgaatgtggacaatgctagaataacttacattatgaaacggagggagta 137
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 98 tatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 106 tatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagggagta 156
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||| ||||||| |||||||||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 72 atgaatcta 80
|||||||||
Sbjct: 96 atgaatcta 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 98 tatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||| |||||| ||||||||||| |||||||||| |||| ||||
Sbjct: 55 tatgaatgtgggaaatgccagaatgacttatattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaat 77
||||||||||||| | ||||||| | ||||| |||||||||||| | ||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaat 70
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 102 aatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 101 gaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagta 151
|||| ||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagtagta 2
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacatt 58
|||||| ||||||||||||||| ||||||| ||||||| |||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcatt 49
||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 2 tactactccctccgtttcacaatgcaagtcattctagcatt 42
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaat 77
||||||||||||||| ||||||| ||||||| || ||||||||||||||||||||||||
Sbjct: 107 tccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatgaat 49
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 99 atgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||
Sbjct: 58 catcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaagtag 115
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcat 61
|||||| ||||||||||||||| ||||||| ||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||| | |||||||||||||| ||||||| ||||||| |||||||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgt 62
Query: 70 taatgaa 76
|||||||
Sbjct: 63 taatgaa 69
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggaggaagtagt 3
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
|||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtagt 3
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||| | ||||||||||||||| ||||||| ||||||| | |||||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 112 atgctagaatgacttacattgtgaaactgagggagtagtat 152
|||||||| |||||||||||||||||| |||||||||||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagtagtat 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcat 48
||||||||| ||||||||||||||| ||||| | ||||||
Sbjct: 114 tactactccctccgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 94 tcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagtat 152
||||||||||||||| |||||||||||||||||| |||||||||| |||| ||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtagtat 118
Score = 79.8 bits (40), Expect = 1e-14
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||
Sbjct: 59 atcaatatgaatgtggaaa-tgctagaatgacttatattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattga 66
||||||| | ||||||||||||| | ||||||| ||||||| ||||||||||||||||
Sbjct: 117 tactacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 56.0 bits (28), Expect = 1e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||| ||||||||||||| | ||||||| ||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatt-tccacattcatattgat 59
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 108/130 (83%), Gaps = 11/130 (8%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| || |||| || |||| ||||||||||||||||||||||||||
Sbjct: 123 tccgtttcataatgtaagccattctatcatttttcacattcatattgatgttaatgaatc 64
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| ||||| |||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 63 ta------gatag-----atatgaatgtgggaaatgctagaatgacttatattgtgaaac 15
Query: 139 tgagggagta 148
|||||||||
Sbjct: 14 ggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||||||||||||| |||||| ||||||| |||||||| |||||| |||| |||||
Sbjct: 74 catcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacggaggaagtag 131
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatat 63
|||||| ||||||||||||| | ||||||| ||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| ||||||| ||||||| |||||||||||||||||||||||| |||
Sbjct: 122 tccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttaatggatc 63
Query: 79 ta 80
||
Sbjct: 62 ta 61
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||||||||| |||||||||||||||||||||| |||||| |||| |||||
Sbjct: 73 catcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagtag 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 123 acttacattgtgaaactgagggagta 148
|||||||||||||||| |||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||||||||||||| ||||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 61 catcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagtag 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 94 tcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
||||||| ||||||||||||||| ||||||| ||| ||| |||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||||||||||||||| |||| |||||||||| ||||||| ||||||||||
Sbjct: 74 catcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacggagggagtag 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| |||||||||| |||| ||||| | || |||| |||||||||||||||||||
Sbjct: 131 ctactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtt 72
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 71 aatgaatcta 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatat 63
|||||| |||||||||||||| ||||| ||||||||| | || ||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| | ||||||||||||||||| ||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatc 92
Query: 79 ta 80
||
Sbjct: 91 ta 90
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgaggga 145
|||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 102 catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 155
Score = 73.8 bits (37), Expect = 6e-13
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 94 tcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgaggga 145
|||||||||||||| | ||||||||||||||||||||||||||| ||||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacattgtgaaacggaggga 8
Score = 58.0 bits (29), Expect = 4e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattga 66
||||||||||||||| ||||||| |||||| | ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatntctcacattcatattga 59
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 83.8 bits (42), Expect = 7e-16
Identities = 115/138 (83%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||||| || | || ||||||| |||||||||||| ||||||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtt 82
Query: 71 aatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacat 130
||| |||||| | ||| |||| |||||||| |||| ||||||| || | |||||||
Sbjct: 81 aataaatctagacacacata-catctatatgaatatggataatgctaaaaagtcttacat 23
Query: 131 tgtgaaactgagggagta 148
|||||||| |||||||||
Sbjct: 22 tgtgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 115/138 (83%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | ||||||||||| ||| |||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatgtat 64
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|| |||| | || || |||| ||||||||||||| |||||||||| | ||||||||
Sbjct: 65 gtgtgtctagat-ttattaacatctatatgaatgtggacaatgctagaaagtcttacatt 123
Query: 132 gtgaaactgagggagtag 149
||||||| ||||||||||
Sbjct: 124 gtgaaacggagggagtag 141
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| ||||||| ||||||| ||||||||||||||||| ||||||||||
Sbjct: 108 tccgtttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaatc 49
Query: 79 ta 80
||
Sbjct: 48 ta 47
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 112 atgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||||||||||||||||||| ||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagtag 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcat 48
||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| ||||||| |||||||||||||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||| |||||| |||||||||||||| |||| |||||||||| |||||||||
Sbjct: 102 catcaatataaatgtgaaaaatgctagaatggcttatattgtgaaacggagggagta 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||||| |||||||| ||||||||| |||||||||| |||| |||||
Sbjct: 57 aatatgaatgtgggaaatgctacaatgacttatattgtgaaacggaggaagtag 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | || |||| ||||||| |||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| ||||||| | ||||||||||||||||||||||||||
Sbjct: 120 tccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaatc 61
Query: 79 ta 80
||
Sbjct: 60 ta 59
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| |||||||||||||||||| |||||||||| |||| ||||
Sbjct: 71 catcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 127
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 110 aaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||||| |||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcatt 49
||||||||||||||| ||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || |||| ||| ||| ||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| |||| |||||||| ||||||||||||||| |||||||||
Sbjct: 103 atcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacggagggagta 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 108 gaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 45 gaaaatactagaatgacttacattgtgaaacggagggagtag 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcatt 41
||||||| ||||||||||||||| |||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 112/139 (80%), Gaps = 15/139 (10%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||| ||||| ||||||| ||||||| | || |||||||||||| ||
Sbjct: 127 ctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatt 68
Query: 71 aatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacat 130
|||||||||| ||||| |||||||||||||||||||||||||| ||
Sbjct: 67 aatgaatcta---------------aatataaatgtggaaaatgctagaatgacttatat 23
Query: 131 tgtgaaactgagggagtag 149
|||||||| |||| |||||
Sbjct: 22 tgtgaaacggaggaagtag 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||||||||| || |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 71 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 127
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatatt 64
||||||||||||| | ||||||| ||||||| ||||||| |||||
Sbjct: 12 tccgtttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||| | |||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 61 catcaatataattgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||| ||| ||||||| ||||| | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 72 atgaatctat 81
||||||||||
Sbjct: 65 atgaatctat 74
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 120 atgacttacattgtgaaactgagggagtagta 151
||||||||||||||||||| ||||||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagtagta 129
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 8 ttactactccatccgtttcacaatgttagtcat 40
|||||||||| ||||||||||||||| ||||||
Sbjct: 130 ttactactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatatt 64
||||||||||||||| ||||||| ||||||| ||||||||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttcccacattcatatt 78
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatat 63
||||||||||||||| ||| ||| ||||||| | |||||||||||
Sbjct: 12 tccgtttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| |||| |||||||||||||||||||||||| |||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 114/139 (82%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg--t 69
|||||| ||||||||||||||| ||||||| ||| ||| | |||||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatgact 64
Query: 70 taatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttaca 129
| || | ||||||| ||||||||| |||||| |||||| || |||||||||||
Sbjct: 65 tttcccatattcatattgatgtcatcaatataaatgtgaaaaatgttaaaatgacttaca 124
Query: 130 ttgtgaaactgagggagta 148
|| |||||| |||||||||
Sbjct: 125 ttatgaaacagagggagta 143
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 81.8 bits (41), Expect = 3e-15
Identities = 108/130 (83%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| ||||||| | || || |||||||| ||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaatc 71
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| | ||| |||||| ||||||||| ||||||||| ||||||||| ||||||||||
Sbjct: 72 tacat----ataacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaac 127
Query: 139 tgagggagta 148
|||| ||||
Sbjct: 128 ggaggaagta 137
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
||||||||||||| | ||||||||||||||| ||||||||| |||||||||
Sbjct: 130 tccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 110 aaatgctagaatgacttacattgtgaaactgaggga 145
|||||||||||||||||| |||||||||| ||||||
Sbjct: 43 aaatgctagaatgacttatattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 61 catcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaat 73
||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagtattttccacattcatattgatgttaat 66
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 119 aatgacttacattgtgaaactgagggagta 148
|||| ||||||||||||||| |||||||||
Sbjct: 81 aatggcttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 91 gcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
|||||||||||||||||| ||||| | |||||||||||||| |||||| |||||||||||
Sbjct: 98 gcatcaatatgaatgtgggaaatggtggaatgacttacattatgaaacggagggagtagt 157
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| |||| ||||||||||||| |||||||||| |||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| ||| ||| ||||||||||||||||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagtatttcccacattcatattgatactaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
|||||||| ||||||||| ||||| ||||||| | |||| ||||||||||||||||||
Sbjct: 157 actactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatg 99
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 108/131 (82%), Gaps = 11/131 (8%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| ||||||| ||| ||| | ||||||||||||||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagtatttctcacattcatattgatgttaatgaatc 71
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| || | |||||||||||| |||||||||||||||||||||| |||||
Sbjct: 72 ta------gaca-----aatatgaatgtgagaaatgctagaatgacttacattatgaaat 120
Query: 139 tgagggagtag 149
||||||||||
Sbjct: 121 ggagggagtag 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| |||| ||||||||||||||||| |||||| |||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatatt 64
||||||| ||| ||||| ||||| ||||||| ||||||| | ||||||||||||
Sbjct: 131 ctactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 98 tatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||| ||||||||||||||||||||||||||||| |||| |||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtag 96
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 110 aaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||||| |||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcata 62
||||||||||||||| ||||||| ||||||| ||||||||||||
Sbjct: 88 tccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcatt 49
|||||| || |||||||||||| ||||||| |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| ||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 102 aatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaac 96
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatat 63
|||||| ||||||||||||||| ||||||| ||||||| |||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacatt 58
|||||| ||||||||||||||| ||||||| ||||||| ||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 20 ccgtttcacaatgttagtcattttagcattacccacattcatat 63
|||||||||||||| ||||||| ||||||| |||||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 94 tcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||| || |||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattga 66
|||||| ||||||||||||||| ||||||| ||||||| ||||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 111 aatgctagaatgacttacattgtgaaac 138
||||||||||||||||| ||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaac 94
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 107/130 (82%), Gaps = 11/130 (8%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaatgaatc 64
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| ||||| |||| ||||||| |||| ||| ||||||||||||||| ||||
Sbjct: 63 ta------gatag-----atataaatgtgggaaatactaaaatgacttacattgttaaac 15
Query: 139 tgagggagta 148
|||||||||
Sbjct: 14 ggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| | ||| ||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 74 catcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacggaggaagta 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatat 63
|||||| ||||||| ||||||| ||||||||||| ||| |||||||| ||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagt 147
|||||||||||| |||||||||||||||||||||| |||||| ||||||||
Sbjct: 107 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagt 157
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 13 actccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaa 72
||||| ||||||||| ||||| ||||||| ||||||| ||||||||||||| || ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 73 tgaatcta 80
||||||||
Sbjct: 97 tgaatcta 90
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||| | | |||||||||||||||||||||| |||||| |||||||||
Sbjct: 56 atatgaatataggaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 98 tatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| |||||||||||||||||||||||| |||| ||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 110 aaatgctagaatgacttacattgtgaaactgagggagtagta 151
|||| ||||||||||||| |||||||||| |||| |||||||
Sbjct: 101 aaatcctagaatgacttatattgtgaaacggaggaagtagta 142
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcata 62
||||||||||||||| ||||||| ||| ||| |||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagtattttccacattcata 55
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| ||||||||| ||||| ||||||| ||||||| || | |||||||| |||||
Sbjct: 160 actactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgt 101
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 100 taatgaatcta 90
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| ||||||| ||||| | | ||||||||||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagtagt 150
||||||||||||||||||||| |||||| |||||||||||
Sbjct: 121 aatgctagaatgacttacattatgaaacggagggagtagt 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||| ||||||||||| | ||||||||||||||||||| |||||| |||| |||||
Sbjct: 61 catccatatgaatgtgagcattgctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 100/120 (83%), Gaps = 9/120 (7%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||||||||||| || ||||||||||||| |||||||||
Sbjct: 125 tccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaatc 66
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| || ||| ||||||||| || |||||||||||||||||||||||||||||
Sbjct: 65 ta------ga---catatatatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagg 143
||||||||||||| ||||||||||| ||||||||| |||||||||| ||||
Sbjct: 76 catcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacggagg 127
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 22 gtttcacaatgttagtcattttagcattacccacattcatat 63
|||||||||||| ||||||| ||||||| ||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| ||||||||||||||| ||||||| || |||| |||| ||| ||||| ||||
Sbjct: 159 actactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgt 100
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 99 taatgaatcta 89
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
|||||||| |||||| ||||||| ||||||| | |||||||||||||||| |||||||||
Sbjct: 12 tccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgcgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
||||| ||| ||| ||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 105 aatataaatatgggaaatgttagaatgacttacattgtgaaacggagggagtagt 159
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| ||||||||||||||| || | ||||| |||| |||||||||| || |||||
Sbjct: 160 actactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgt 101
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 100 taatgaatcta 90
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||||| ||||||||||||||| || | | ||||||| | ||||||||||| ||||
Sbjct: 2 tactactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatg 61
Query: 69 ttaatgaatcta 80
||||||||||||
Sbjct: 62 ttaatgaatcta 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagta 151
|||| ||||||||||| |||||||| | | ||||||||||||||| ||||||||||||
Sbjct: 61 catctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacggagggagtagta 2
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 124 cttacattgtgaaactgagggagtagt 150
||||||||||||||| |||||||||||
Sbjct: 134 cttacattgtgaaacggagggagtagt 160
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| ||||||||| ||||| ||||||| ||||||| || | |||||||| |||||
Sbjct: 3 actactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgt 62
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| ||||||| ||||| | | ||||||||||| ||||||||||||||
Sbjct: 151 tccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatc 92
Query: 79 ta 80
||
Sbjct: 91 ta 90
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagtagt 150
||||||||||||||||||||| |||||| |||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagtagt 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||| ||||||||||| | ||||||||||||||||||| |||||| |||| |||||
Sbjct: 102 catccatatgaatgtgagcattgctagaatgacttacattatgaaacggaggaagtag 159
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 103 atgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacat 57
|||||| ||||||||||||||| ||||||| ||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| |||||||||||||| |||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcatt 49
|||||| ||||||||||||||| | ||||| |||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| |||| || ||||||| ||||||||||||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||||||| |||||||||| |||||||||| |||||| |||| ||||
Sbjct: 61 catctatatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| |||| || ||||||| ||||||||||||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||||||| |||||||||| |||||||||| |||||| |||| ||||
Sbjct: 61 catctatatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 103 atgtggaaaatgctagaatgacttacattgtgaaactgagggagtagtat 152
|||||| |||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagtagtat 132
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||| | || | || ||||||||||||||| ||||| ||||||
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 78
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 77 aatgaatcta 68
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||| | || | || ||||||||||||||| ||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 63
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 35 agtcattttagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 109 agtcattctagcatttcccacattcatattgatgttaatgaatcta 64
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 35 agtcattttagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||| | ||||||||||||||||||||||||||||
Sbjct: 2 agtcattctagcatttctcacattcatattgatgttaatgaatcta 47
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgactt 126
||||||||||||||||| |||||||||||||||||
Sbjct: 76 catcaatatgaatgtgggaaatgctagaatgactt 110
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgactt 126
|||||||||||||||| |||||||||||||||||
Sbjct: 35 catcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | || ||||||| ||| ||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 72 atgaatctat 81
||||||||||
Sbjct: 98 atgaatctat 89
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| ||||||||| || |||||||||| | ||||||||||||||| |||||||||
Sbjct: 102 catctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| || | || ||||||| |||||||||| || |||| |||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcccacattcacatagatgctaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatatt 64
||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| |||||||| |||||||||||||||||||| |||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||||||| ||||||| |||||||| ||| ||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 72 atgaa 76
|||||
Sbjct: 61 atgaa 57
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||| ||| ||||||| |||||||||||||||||| |||||||||| |||||||||
Sbjct: 65 catcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagggagta 121
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| || | || ||||||| ||||||||||||| |||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 72 atgaatctat 81
||||||||||
Sbjct: 80 atgaatctat 71
Score = 63.9 bits (32), Expect = 6e-10
Identities = 108/131 (82%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| || | || ||||||| || |||||||||| |||||||||| |
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcctacattcatatagatgttaatg--tg 69
Query: 79 tatctattgat-agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
||| ||| || | |||| |||||||||||| |||||||||| | |||||||| |||||
Sbjct: 70 tatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 129
Query: 138 ctgagggagta 148
| |||||||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 35 agtcattttagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 2 agtcattctagcatttcccacattcatattgatgttaatgaatcta 47
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 35 agtcattttagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 109 agtcattctagcatttcccacattcatattgatgttaatgaatcta 64
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgactt 126
||||||||||||||||| |||||||||||||||||
Sbjct: 35 catcaatatgaatgtgggaaatgctagaatgactt 1
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgactt 126
||||||||||||||||| |||||||||||||||||
Sbjct: 76 catcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 114/137 (83%), Gaps = 3/137 (2%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||| | ||||| ||||||| || |||| |||||||| ||| |||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 72 atgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacatt 131
|||||||| || ||| |||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 78 gtgaatctagacat--ata-catccatatgaatgtgagaaatgttagaatgacttacatt 22
Query: 132 gtgaaactgagggagta 148
|||||| |||||||||
Sbjct: 21 atgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| ||| |||||||||||||| |||||||||||||||| | |||| |||||||||
Sbjct: 82 catccatacgaatgtggaaaatgttagaatgacttacattataaaacggagggagta 138
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| ||||||||||||||| | || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 72 a 72
|
Sbjct: 65 a 65
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||| ||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 61 catcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaa 72
||||||||||||| | ||||||||||||||| | || ||| |||||||||||||
Sbjct: 115 tccgtttcacaatataagtcattttagcatttctcatatttatattgatgttaa 62
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | |||||| ||| |||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| ||||||||||||| ||| ||| || | ||||||||||||||| |||||||||
Sbjct: 102 catctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| || |||||||||||| || | || ||||||||||||||||||| | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 99 atgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| |||||||||| | ||||||||||||||| |||||||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttacattgtgaaacagagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatat 63
|||||| ||||||||||||||| || | |||||||||| | ||||| |||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatat 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagta 148
||||||| || | ||||||||||||||| |||||||||
Sbjct: 123 aatgctaaaaagtcttacattgtgaaacggagggagta 160
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 104 tgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 99 atgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcat 61
|||||| ||||||||||||||| ||||||||||||||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcatt 49
||||||||||||||| ||||||| |||||||
Sbjct: 101 tccgtttcacaatgtaagtcattctagcatt 71
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 101 gaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||||||||| |||||||||||||||||||||||||| |||| |||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 73.8 bits (37), Expect = 6e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| ||||| |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 60 catcaatatggatgtg-aaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 44/46 (95%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 99 atgaatgtggaaaatgctagaatgacttacattgtgaaactgaggg 144
||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 64 atgaatgtg-aaaatgctagaatgacttacattgtgaaacggaggg 108
Score = 61.9 bits (31), Expect = 2e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaat 77
||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatt-ttcacatccatattgatgttaatgaat 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcatt 49
||||||||||||||| ||||||| |||||||
Sbjct: 105 tccgtttcacaatgtaagtcattctagcatt 75
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | || ||| ||| ||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||||||| ||| |||||| | ||||||||||||||| |||||||||
Sbjct: 102 catctatatgaatgtgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | || ||| | | |||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 72 atgaat 77
||||||
Sbjct: 65 atgaat 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 115 ctagaatgacttacattgtgaaactgagggagta 148
|||||| | ||||||||||||||| |||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| |||||||||||||||||| |||||||||| |||| ||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
||||||||||||| ||| |||||||||||||||||| ||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaac 15
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||| ||||||||||||||| | ||||||| ||||||| |||| |||||||||||||
Sbjct: 4 ctactacatccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatatt 64
||||||||||||| | ||||||| ||||||| ||||||||||||||
Sbjct: 112 tccgtttcacaatataagtcattctagcatttcccacattcatatt 67
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||| ||||||||| |||||||||||| ||||| |||||||||| |||||||||
Sbjct: 61 catcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||| | ||| ||| ||||||| |||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 110 aaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||||| |||| ||||
Sbjct: 88 aaatgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | |||||| ||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| ||||||||||||| ||| ||| || | ||||||||||||||| |||||||||
Sbjct: 61 catctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 21 cgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaat 77
|||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 99 atgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtg 134
|||||||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 55 tagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtg 100
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcat 61
|||||| ||||||||||||||| | ||||| ||||||| | |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| || | |||||||||| | ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| || | || ||||||| ||||||||||||| ||||||||||||||
Sbjct: 151 tccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatc 92
Query: 79 ta 80
||
Sbjct: 91 ta 90
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||||||| |||||||||| | |||||||| |||||| |||| ||||
Sbjct: 102 catctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||| || ||| |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 75 catcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 108 gaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| |||||||||||||||||||| |||||||||
Sbjct: 45 gaaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaat 77
||||||||||||||| ||||||| ||||||| ||| || ||||||||||||||||||
Sbjct: 124 tccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaatgaat 66
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcatt 49
|||||| ||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatt 42
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||| | ||||||| ||||||| ||||||||||||| ||||||||||||||
Sbjct: 12 tccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatc 71
Query: 79 t 79
|
Sbjct: 72 t 72
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||| | ||||||| ||| ||| ||||||||| ||| ||| |
Sbjct: 157 ctactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatact 98
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 97 aatgaatcta 88
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 101 gaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||||| ||| ||||||||||||| |||||||||| ||||||||||
Sbjct: 109 gaatgtgggcaatcctagaatgacttatattgtgaaacggagggagtag 157
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagg 143
|||| |||||||||||| ||||||||||||||||| ||| |||||| ||||
Sbjct: 61 catctatatgaatgtgggcaatgctagaatgacttatattatgaaacggagg 10
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| || | |||||||||| | ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| || | || ||||||| ||||||||||||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||||||| |||||||||| | |||||||| |||||| |||| ||||
Sbjct: 61 catctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 100 tgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
|||||||| ||||||||| ||||||||||||| |||||| |||||||||||
Sbjct: 110 tgaatgtgaaaaatgctacaatgacttacattatgaaacagagggagtagt 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 110 aaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||||||||| |||||| |||||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||| | ||||||||||||||| || | || ||||||| ||||||||||||| |||||
Sbjct: 136 actacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgt 77
Query: 70 taatgaatcta 80
|||| ||||||
Sbjct: 76 taataaatcta 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
|||| |||||||||||| |||||||||| | ||||||||||||||| |||| ||||||
Sbjct: 78 catctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagtagt 136
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 69.9 bits (35), Expect = 1e-11
Identities = 106/130 (81%), Gaps = 11/130 (8%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| ||||||| ||||||| ||| | |||||||||||||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatgaatc 64
Query: 79 tatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|| ||||| ||||||||||| |||| ||||||||||||||||||| ||||
Sbjct: 63 ta------gatag-----atatgaatgtgagaaatactagaatgacttacattgttaaac 15
Query: 139 tgagggagta 148
|||||||||
Sbjct: 14 ggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||| | ||| |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 74 catcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatat 63
|||||| ||||||| ||||||| ||||||| ||| ||| | |||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 90 agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||| ||| |||||||||||||||||||||| ||| ||||| |||||||||
Sbjct: 81 agcatcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 103 atgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||| ||||||||||||||||| |||||| |||||||||
Sbjct: 50 atgtggaaaatactagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| | | |||||||||| ||||||||||||| |||||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 72 atgaat 77
||||||
Sbjct: 82 atgaat 77
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||| ||||||||| ||||| || | || ||||||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 23 tttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatcta 80
||||| ||||| ||||||| ||||||| | ||||||||||| ||||||||||||||||
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatcta 64
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 137
|||| ||||||||||| ||||||||||||||||||||| |||||
Sbjct: 76 catctatatgaatgtgtgcaatgctagaatgacttacattatgaaa 121
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| || | || ||||||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 72 atgaat 77
||||||
Sbjct: 65 atgaat 70
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||||||| |||||||||| | |||||||| |||||| |||||||||
Sbjct: 61 catctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||| ||||||||| ||||| || | || ||||||| ||||||||||||| |||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| || | || |||||||| |||||||||| | ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcattatccacattcatttagatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 99 atgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||| |||||||||| | ||||||||||||||| |||| ||||
Sbjct: 54 atgaatgtggataatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| |||||||| ||||||||||||| | |||| ||| |||| ||||
Sbjct: 64 tagcatcaatatgaatatggaaaatactagaatgacttatactgtggaacggaggaagta 5
Query: 149 gt 150
||
Sbjct: 4 gt 3
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||| || ||||| |||||||||||| |||||| ||| |||||||||
Sbjct: 99 tagcatcaatatgaatatgagaaatgttagaatgacttatattgtggaacggagggagta 158
Query: 149 g 149
|
Sbjct: 159 g 159
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| |||||| |||||| | ||||||| || |||| | || ||||||||||||| |
Sbjct: 159 ctactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgct 100
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatatt 64
||||||||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 102 tccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| |||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 119 aatgacttacattgtgaaactgagggagta 148
|||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcatttta 44
|||||| ||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttta 37
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| || | || ||||||||||||||||||| | | ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcattacccacattcatttagttgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | || ||||||| ||| || ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| ||||| || |||| |||||||||| | ||||||||||||||| |||||||||
Sbjct: 102 catctatatgtatatggacaatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 99 atgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| |||||||||| | ||||||||||||||| |||| ||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| || | |||||||||| |||| |||||| | ||||||||||||||
Sbjct: 151 tccgtttcacaatgtaagactttttagcattgcccatattcatttagatgttaatgaatc 92
Query: 79 ta 80
||
Sbjct: 91 ta 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| | ||||||||||||||| |||||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | || ||||||| | || || ||||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 35 agtcattttagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||| |||||||||||||||||||||||| |||||
Sbjct: 2 agtcattctagcatttcccacattcatattgatgttaatgtatcta 47
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 35 agtcattttagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||| |||||||||||||||||||||||| |||||
Sbjct: 122 agtcattctagcatttcccacattcatattgatgttaatgtatcta 77
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgactt 126
||||||||||||||||| |||||||||||||||||
Sbjct: 35 catcaatatgaatgtgggaaatgctagaatgactt 1
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgactt 126
||||||||||||||||| |||||||||||||||||
Sbjct: 89 catcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 90 agcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||
Sbjct: 62 agcatctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagtag 121
Query: 150 ta 151
||
Sbjct: 122 ta 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 8 ttactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||||||| ||||||||||||||| || || ||||||| ||||||||||||| |||
Sbjct: 124 ttactactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatagat 65
Query: 68 g 68
|
Sbjct: 64 g 64
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||||||| || ||||||| | ||||||||||||||| |||| ||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||||||||||| || | || |||| || ||||||||||||| ||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcgttgcccacattcatatagatg 61
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 114/139 (82%), Gaps = 5/139 (3%)
Strand = Plus / Plus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| ||||||||| ||||| ||||||| || ||| |||| || ||||| ||| |
Sbjct: 3 actactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatat 62
Query: 70 taatgaatctatctattgatagcatcaatatgaatgtggaaaatgctagaatgacttaca 129
||||||||||| | | ||| || |||||||||| || |||||||||||||||||||
Sbjct: 63 taatgaatctag--acttata---tctatatgaatgtagacaatgctagaatgacttaca 117
Query: 130 ttgtgaaactgagggagta 148
|| |||||| |||| ||||
Sbjct: 118 ttatgaaacggaggaagta 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 116 tagaatgacttacattgtgaaactgagggagtagt 150
|||||||||||||||| |||||| |||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagtagt 3
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtag 149
||||| |||||| ||||||||||||||||||||||||||||| |||| |||||
Sbjct: 57 aatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatg 74
||||||||||||||| ||||||| ||||||| | |||||| ||||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgttaatg 67
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagtag 149
|||||||||||||||||||||||| ||| || |||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagtag 102
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 11 ctactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtt 70
||||||| ||||||||||||| | || | |||||||| ||||||||| |||| ||||||
Sbjct: 155 ctactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtt 96
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 95 aatgaatcta 86
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| || | || |||| || ||||||||||| | ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| |||| || ||| ||| ||||||||||||| ||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| ||||||||| ||||| || | || ||||||| | || |||||||| |||||
Sbjct: 160 actactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgt 101
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 100 taatgaatcta 90
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||||||| ||| |||||| |||||||||| |||||| |||| ||||
Sbjct: 61 catctatatgaatgtgggcaatactagaaagacttacattatgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagtagt 150
|||||||||| | |||||||| |||||| |||||||||||
Sbjct: 121 aatgctagaaagtcttacattatgaaacggagggagtagt 160
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||| ||| || ||||||||||||||| |||||||||||||| |||||||||
Sbjct: 48 catcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 103 atgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||| ||||| ||||||||||||| |||||||||| ||||||||
Sbjct: 50 atgtgaaaaatactagaatgacttatattgtgaaacgaagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcatt 49
|||||| ||||||||||||||| | ||||| |||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatt 67
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| || | || ||||||| || | ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagtat 152
||||||||||||| |||||||||| | |||||||| |||||| |||| ||||||||
Sbjct: 105 atatgaatgtggacaatgctagaaagtcttacattatgaaacggaggaagtagtat 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||| | ||||||||| ||||| || | || ||||||| |||||||||||| |||
Sbjct: 159 tactacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatg 100
Query: 69 ttaatgaatcta 80
||||||||||||
Sbjct: 99 ttaatgaatcta 88
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| | | |||||||||| | |||||||| |||||| |||||||||
Sbjct: 61 catcaatatgaatataggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | || ||| ||| |||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| |||||||| ||| ||| |||||| | ||||||||||||||| |||||||||
Sbjct: 102 catctatatgaatatgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| |||||||||| |||| || | || ||| | | |||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 72 atgaat 77
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| || |||||| ||||| | ||||| ||||||| ||||||| ||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 72 atgaatcta 80
|||||||||
Sbjct: 72 atgaatcta 64
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| ||||| |||||| ||||||||||||| ||||||| |||||| |||||||||
Sbjct: 76 catctatatgcatgtgggcaatgctagaatgatttacattatgaaacagagggagta 132
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatat 63
||||||||| ||||| ||||||| |||||||||||| || |||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattacccatatgcatat 56
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| ||||||||||||| |||||||||| | |||||||| |||||| |||||||||
Sbjct: 76 catctatatgaatgtggacaatgctagaaagtcttacattatgaaacagagggagta 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| || |||||| ||||| || | || ||||||| |||||||||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 72 atgaatcta 80
|||||||||
Sbjct: 72 atgaatcta 64
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | || || |||| ||||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||| |||||||||||| |||| ||||| | ||||||||||||||| |||||||||
Sbjct: 99 tagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||| ||||| || | || ||||||||||||||||||||| |||| |||| ||||
Sbjct: 12 tccgtttcataatgtaagactttatagcattacccacattcatatagatgctaataaatc 71
Query: 79 tat 81
|||
Sbjct: 72 tat 74
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||| |||||||||||| ||||||| || | |||||||| |||||| |||| ||||
Sbjct: 64 tagcatctatatgaatgtgggtaatgctataaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| || | || ||||||| ||||||| ||||| |||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 72 atgaatcta 80
|||||||||
Sbjct: 87 atgaatcta 79
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||| | ||||||||||||||| || | || ||||||| | |||||||| | |||||
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgt 62
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||| |||||| ||||| |||||||||||| ||||||||||| |||| ||||
Sbjct: 53 atcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 116 tagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcatt 41
|||||| ||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 105 gtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||| ||| |||||| |||||||||
Sbjct: 48 gtggaaaatgctagaatgacttatattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 110 aaatgctagaatgacttacattgtgaaactgagggagtag 149
|||||||||||||||||||||| |||||| |||||||||
Sbjct: 108 aaatgctagaatgacttacattatgaaacgaagggagtag 147
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||| | ||||||||||||||| || | || ||||||| ||||||| ||||| ||||
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgt 62
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | || ||||||| |||| |||||| | |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 89 tagcatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||| | |||||| ||| |||||||||| | ||||||||||||||| |||||||||
Sbjct: 99 tagcatctaaatgaatttgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
||||| |||||| |||||||||| | ||||||||||||||| |||| ||||||
Sbjct: 56 atatgtatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagtagt 3
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaat 77
||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||
Sbjct: 130 tccgtttcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaat 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagta 148
||||||| |||| ||||||||||||||| |||| ||||
Sbjct: 100 aatgctaaaatgtcttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
|||| ||||||||||||| |||||||||| | |||||||| |||||| |||||| ||||
Sbjct: 52 catctatatgaatgtggacaatgctagaaagtcttacattatgaaacggagggaatagt 110
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||| ||| ||||||||| ||||| || | || ||||||| |||||||||||| |||||
Sbjct: 110 actattccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgt 51
Query: 70 taatgaatcta 80
||| |||||||
Sbjct: 50 taacgaatcta 40
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 110 aaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||||||| |||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacatt 58
|||||||||||||||||| ||| | ||||||||||||||| | ||||||
Sbjct: 93 actactccatccgtttcataatataagtcattttagcatttctcacatt 45
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcatt 49
||||||||||||||| ||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 114 gctagaatgacttacattgtgaaactgagggagta 148
||||||||||||||||||||||||| |||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 103 atgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||| ||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagc 46
|||||| ||||||||||||||| ||||||| ||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaat 77
||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||
Sbjct: 12 tccgtttcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaat 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagta 148
||||||| |||| ||||||||||||||| |||| ||||
Sbjct: 42 aatgctaaaatgtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 43 tagcattacccacattcatattgatgttaatgaatctat 81
||||||| ||||||||||||| |||||||||||||||||
Sbjct: 36 tagcattgcccacattcatatagatgttaatgaatctat 74
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatctat 81
||||||| ||||||||||||| |||||||||||||||||
Sbjct: 129 tagcattgcccacattcatatagatgttaatgaatctat 91
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| ||||||||||||||||
Sbjct: 101 tagcattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| ||||||||||||||||
Sbjct: 8 tagcattgcccacattcatatggatgttaatgaatcta 45
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 46 cattacccacattcatattgatgttaatgaatcta 80
|||| ||||||||||||| ||||||||||||||||
Sbjct: 102 cattgcccacattcatatggatgttaatgaatcta 68
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 115/141 (81%), Gaps = 3/141 (2%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||| | || | || |||||||||||| |||||||| |||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 72 atgaatctatctattga-tagcatcaatatgaatgtggaaaatgctagaatgacttacat 130
||||||||| ||| | || |||| |||||||| || |||||||||| |||||| ||
Sbjct: 80 atgaatcta--gattcattaacatctatatgaatatgagcaatgctagaaagacttatat 23
Query: 131 tgtgaaactgagggagtagta 151
| |||||| |||| |||||||
Sbjct: 22 tatgaaacagaggaagtagta 2
Score = 60.0 bits (30), Expect = 1e-08
Identities = 115/141 (81%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 9 tactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatg 68
||||||| | || |||||| ||| | |||| || ||||||| | || |||||||| ||||
Sbjct: 2 tactacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatg 61
Query: 69 ttaatgaatctatctattga-tagcatcaatatgaatgtggaaaatgctagaatgactta 127
|||||||||||| ||| | ||||||| |||||||| ||| |||||||||| | ||||
Sbjct: 62 ttaatgaatcta--gattcattagcatctatatgaatatgggtaatgctagaaagtctta 119
Query: 128 cattgtgaaactgagggagta 148
||| |||||| |||||||||
Sbjct: 120 tattatgaaacggagggagta 140
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| || | || ||||||| | ||||| ||||| ||||||||||||||
Sbjct: 151 tccgtttcacaatgtaagactttctagcattgctcacatacatatagatgttaatgaatc 92
Query: 79 ta 80
||
Sbjct: 91 ta 90
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| | ||||||||||||||| |||| ||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||| ||||||||||||||||| || | || ||||||| ||||||||||||| ||| ||
Sbjct: 126 tacttcatccgtttcacaatgtaagactttctagcattgcccacattcatatggatacta 67
Query: 72 atgaat 77
||||||
Sbjct: 66 atgaat 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaac 138
|||||||||||| |||||||||| | |||||||||||||||
Sbjct: 75 atatgaatgtgggcaatgctagaaagtcttacattgtgaaac 116
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||||||||| ||||||||||
Sbjct: 87 tagcatttcccacattcatattgatgtcaatgaatcta 50
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 cattacccacattcatattgatgttaatgaatcta 80
|||| ||||||||||||||||||| ||||||||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatcta 39
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctag 118
||||||||||||||||| |||||||||
Sbjct: 62 catcaatatgaatgtgggaaatgctag 88
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| ||||||||||||||||
Sbjct: 101 tagcattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| ||||||||||||||||
Sbjct: 103 tagcattgcccacattcatatagatgttaatgaatcta 66
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| |||||||||||| |||||||||||||||
Sbjct: 12 tagcattgtccacattcatatatatgttaatgaatcta 49
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||||||||||||||||| |||||||||||||||
Sbjct: 101 tagcattacccacattcatatatatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| || | || ||||||| |||| |||||| | ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | || ||| ||| ||||| | ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| | ||||||||||||||| |||| ||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 115 ctagaatgacttacattgtgaaactgagggagta 148
|||||| | ||||||||||||||| |||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| ||||||||||||||||
Sbjct: 103 tagcattgcccacattcatatagatgttaatgaatcta 66
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| |||| |||||||| |||||||||||||||
Sbjct: 12 tagcattgcccatattcatatatatgttaatgaatcta 49
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| ||||||||||||||||
Sbjct: 128 tagcattgcccacattcatatagatgttaatgaatcta 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 43 tagcattacccacattcatattgatgttaa 72
||||||||||||||||||||| ||||||||
Sbjct: 36 tagcattacccacattcatatagatgttaa 65
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| ||||||||||||||||
Sbjct: 103 tagcattgcccacattcatatagatgttaatgaatcta 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| |||||||||||||||
Sbjct: 12 tagcattgcccacattcatatatatgttaatgaatcta 49
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||||||||||||||| | ||||||||||||||||
Sbjct: 36 tagcattacccacattcatttagatgttaatgaatcta 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagtag 149
|||| ||||| | ||||||||||||||| ||||||||||
Sbjct: 121 aatgttagaaagtcttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| ||||||||||||||||
Sbjct: 95 tagcattgcccacattcatatagatgttaatgaatcta 58
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
|||||| |||||||||||||| ||||||||||||||||
Sbjct: 12 tagcatcacccacattcatatagatgttaatgaatcta 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
|||||| || ||||||||||| ||||| ||||||||||
Sbjct: 103 tagcatcacacacattcatatagatgtaaatgaatcta 66
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 96 aatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||||||| |||| ||| ||| |||||||||||||||| |||| ||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatatt 64
||||||||||||||| ||| ||| ||| ||| ||||||||||||||
Sbjct: 133 tccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||| ||||| || | || ||||||| ||||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||| |||||||||| | |||||||| |||||| |||||||||
Sbjct: 107 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 110 aaatgctagaatgacttacattgtgaaac 138
|||||||||||||||||||||||||||||
Sbjct: 51 aaatgctagaatgacttacattgtgaaac 79
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 115 ctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||||||||||| |||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacatt 58
||||||||||||||| ||||||| ||||||| || |||||
Sbjct: 82 tccgtttcacaatgtaagtcattctagcatttcctacatt 43
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 104 tgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||| |||||||||| | ||||||||||||||| |||||||||
Sbjct: 49 tgtggacaatgctagaaagccttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 102 aatgtggaaaatgctagaatgacttacattgtgaaactgaggga 145
|||||||| ||| |||||| | ||||||||||||||| ||||||
Sbjct: 72 aatgtggacaatactagaaagccttacattgtgaaacggaggga 115
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| || |||||| ||||| || | |||||||||| ||||||||||||| ||| | |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||| ||||||| || | |||||||| |||||| |||||||||
Sbjct: 107 atatgaatgtgggcaatgctaaaaagtcttacattatgaaaccgagggagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 22 gtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatcta 80
|||||| ||||| || | || |||| || ||||||||||||| |||||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagccttgcccacattcatatatatgttaatgaatcta 73
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||| |||||| |||||||||||||||||| ||||| |||| |||| ||||
Sbjct: 37 catcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagta 93
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 102 aatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagt 150
||||||| |||||||||| | |||||||| ||||||||||||||||||
Sbjct: 51 aatgtgggcaatgctagaaagtcttacattatgaaactgagggagtagt 3
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 10 actactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgt 69
|||||||| || |||||| ||||| || | || ||||||| |||||||| ||| |||||
Sbjct: 3 actactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgt 62
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 8 ttactactccatccgtttcacaatgttagtcattttagcattacccacattcatattgat 67
|||||||| | ||||||||||||||| || | |||||||||| ||||||| || | |||
Sbjct: 160 ttactacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagat 101
Query: 68 gttaatgaatcta 80
||||||||||||
Sbjct: 100 attaatgaatcta 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 102 aatgtggaaaatgctagaatgacttacattgtgaaactgagggagtagta 151
|||||||| ||||||| || | ||||||||||||||| |||| |||||||
Sbjct: 110 aatgtggacaatgctaaaaagtcttacattgtgaaacggaggaagtagta 159
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||| ||||||||||||| |||||||||| | |||||||| ||||| |||||||||
Sbjct: 61 catctatatgaatgtggacaatgctagaaagtcttacattatgaaatggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||| ||||| ||||| || | || ||||||| |||||||||||| |||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 72 atgaatcta 80
|| ||||||
Sbjct: 65 ataaatcta 73
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||||||||||||||| || | || ||||||| ||||||| ||| | |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 72 atgaatcta 80
|| ||||||
Sbjct: 98 ataaatcta 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||||| || | || ||| |||||| ||||||| | ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagactttatagtattacctccattcatttagatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 111 aatgctagaatgacttacattgtgaaactgagggagta 148
|||||||||| | ||||||||||||||| |||||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 93 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||| ||| || ||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 51 atcaatataaatatgaaaaatgctaaaatgatttacattgtgaaatggagggagta 106
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 12 tactccatccgtttcacaatgttagtcattttagcattacccacattcatattgatgtta 71
|||||| ||| ||||||||||| | ||||||||||||| || ||| |||||||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 72 atgaatcta 80
|||||||||
Sbjct: 46 atgaatcta 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 119 aatgacttacattgtgaaactgagggagta 148
|||||||||||||||||||| |||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 97 atatgaatgtggaaaatgctagaatgacttacattgtgaaactgaggg 144
||||||||||| |||||| || ||||||||| |||||||||| |||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggaggg 126
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||||||||||| || ||| | ||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 110 aaatgctagaatgacttacattgtgaaactgagggagta 148
|||||||| ||||||||||||| |||||| |||||||||
Sbjct: 90 aaatgctacaatgacttacattatgaaacggagggagta 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 19 tccgtttcacaatgttagtcattttagcattacccacattcatattgatgttaatgaatc 78
||||||||||||| | ||||||| ||| ||| | || ||| ||||||||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagtatttctcatatttatattgatgataatgaatc 71
Query: 79 ta 80
||
Sbjct: 72 ta 73
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 92 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaactgagggagta 148
||||||||| ||| || |||| ||||||||||||| |||||||||| |||| ||||
Sbjct: 61 catcaatataaatatgagaaatactagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 cccacattcatattgatgttaatgaatctat 81
||||||||||||| |||||||||||||||||
Sbjct: 44 cccacattcatatagatgttaatgaatctat 74
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 51 cccacattcatattgatgttaatgaatctat 81
||||||||||||| |||||||||||||||||
Sbjct: 121 cccacattcatatagatgttaatgaatctat 91
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 108 gaaaatgctagaatgacttacattgtgaaac 138
|||||||||||||||||||| ||||||||||
Sbjct: 49 gaaaatgctagaatgacttatattgtgaaac 79
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 112 atgctagaatgacttacattgtgaaactgagggagta 148
|||||||||||||||||| |||||||| |||| ||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| |||||||| |||||||
Sbjct: 36 tagcattgcccacattcatatagatgttaacgaatcta 73
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| |||| |||||||||||
Sbjct: 127 tagcattgcccacattcatatagatgctaatgaatcta 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 43 tagcattacccacattcatattgatgttaatgaatctat 81
||||||| |||||| |||||| |||||||||||| ||||
Sbjct: 36 tagcattgcccacaatcatatagatgttaatgaacctat 74
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 43 tagcattacccacattcatattgatgttaatgaatcta 80
||||||| ||||||||||||| |||||||||||||||
Sbjct: 89 tagcattgcccacattcatatatatgttaatgaatcta 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 46 cattacccacattcatattgatgttaatgaatcta 80
|||| ||||||||||||| |||||||||||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatcta 39
