miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00075;mir-166;AM468140.2/16750-16595 29760:Vitis vinifera
Length = 156
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 168 tggtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||||
Sbjct: 123 tggtgtcgtcggaccaggcttcattcc 149
>RF00075;mir-166;CAAP02000145.1/77043-77192 29760:Vitis vinifera
Length = 150
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 168 tggtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||||
Sbjct: 117 tggtgtcgtcggaccaggcttcattcc 143
>RF00075;mir-166;ABIM01020443.1/6232-6097 3649:Carica papaya
(papaya)
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 105 gtgtcgtcggaccaggcttcattcc 129
>RF00075;mir-166;EU548853.1/145-266 3702:Arabidopsis thaliana (thale
cress)
Length = 122
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 91 gtgtcgtcggaccaggcttcattcc 115
>RF00075;mir-166;AASG02010073.1/7999-8131 3988:Ricinus communis
(castor bean)
Length = 133
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 102 gtgtcgtcggaccaggcttcattcc 126
>RF00075;mir-166;AARH01001165.1/83261-83385 3694:Populus trichocarpa
Length = 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 gtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||
Sbjct: 96 gtcgtcggaccaggcttcattcc 118
