miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 194 bits (98), Expect = 3e-49
Identities = 143/158 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64
|||||||| ||||||||||||||||||||||||||| ||| | | |||||||| |||||
Sbjct: 6 cctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacggagcaa 65
Query: 65 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 124
||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 66 aatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtccattagtga 125
Query: 125 aatctctaaaaagacttatattatggaacggagggagt 162
|||||||| ||||||||||||| ||||||||||||||
Sbjct: 126 aatctctacaaagacttatatttaggaacggagggagt 163
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 103 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
||||||||||| | ||||||| |||| || |||||||||||||| ||||||||||||||
Sbjct: 61 tccgtatgtagacatctagtgaaatcgcttaaaagacttatatttaggaacggagggagt 2
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 57
|||||||| |||||||||||||||| || |||||| |||| |||||||||||
Sbjct: 159 cctccgttcctaaatataagtctttgtagagatttcactaatggactacatac 107
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 170 bits (86), Expect = 4e-42
Identities = 140/158 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64
|||||||| ||||||||||||||||| || |||||| ||| | |||||||||| |||||
Sbjct: 159 cctccgttcctaaatataagtctttttagagatttcgctagacgactacatacggagcaa 100
Query: 65 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 124
|||||||||||||| | |||||| |||||||||||||||||| |||||||| ||||||
Sbjct: 99 aatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctactagtga 40
Query: 125 aatctctaaaaagacttatattatggaacggagggagt 162
|| ||||||||||||||||||| ||||||||||||||
Sbjct: 39 aacctctaaaaagacttatatttaggaacggagggagt 2
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 103 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
||||||||||||| ||||| | |||||||||||||||||||||| ||||||||||||||
Sbjct: 104 tccgtatgtagtcgtctagcgaaatctctaaaaagacttatatttaggaacggagggagt 163
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 cctccgtttctaaatataagtctttt 30
|||||||| |||||||||||||||||
Sbjct: 6 cctccgttcctaaatataagtctttt 31
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 163 bits (82), Expect = 9e-40
Identities = 140/158 (88%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 5 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64
|||||||| |||||| |||||||||| || ||||||||||| || ||||||| |||||
Sbjct: 8 cctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatggagcaa 67
Query: 65 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 124
||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 68 aatgagtgaatctgtactctaa-gtatgtctatatacatccgtatgtagtcccctagtga 126
Query: 125 aatctctaaaaagacttatattatggaacggagggagt 162
|| |||||||||||||||||| ||||||||||||||
Sbjct: 127 aacttctaaaaagacttatatttaggaacggagggagt 164
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 125 aatctctaaaaagacttatattatggaacggagggagt 162
|||||||||||||||||| ||| ||||||||||||||
Sbjct: 41 aatctctaaaaagacttacatttaggaacggagggagt 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttctaaatataagtctttt 30
|||||||| |||||||||||||||||
Sbjct: 160 cctccgttcctaaatataagtctttt 135
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 131 bits (66), Expect = 3e-30
Identities = 137/158 (86%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64
|||| ||| ||||||||||||||||| || |||| || | ||||||||||| |||||
Sbjct: 10 cctctgttcctaaatataagtctttttagagatt-ctaatatggactacatacggagcaa 68
Query: 65 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 124
||||||||||||||||||||||| || |||||||| |||||||||||||||| || |
Sbjct: 69 aatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtcc-atattca 127
Query: 125 aatctctaaaaagacttatattatggaacggagggagt 162
|||||||||||||||||||||| ||||||||||||||
Sbjct: 128 aatctctaaaaagacttatatttaggaacggagggagt 165
Score = 56.0 bits (28), Expect = 2e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 103 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
|||||||||||||| || | ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 64 tccgtatgtagtcca-tattagaatctctaaaaagacttatatttaggaacagagggagt 6
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttctaaatataagtcttttaagcgattt 39
|||||||| ||||||||||||||||| || |||||
Sbjct: 161 cctccgttcctaaatataagtctttttagagattt 127
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 109 bits (55), Expect = 1e-23
Identities = 101/115 (87%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 48 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 107
|||||||||| ||||||||||||||||||| |||||||| ||||||||| |||||||||
Sbjct: 115 gactacatacggagcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgt 56
Query: 108 atgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
||||||| | |||| ||||||||||| | |||||||| ||||||||||||||
Sbjct: 55 atgtagt-ttatagtacaatctctaaaaggtcttatatttaggaacggagggagt 2
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 103 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
||||||||||||| |||||| ||| |||||| | |||||||| |||||||||||||||
Sbjct: 103 tccgtatgtagtctcctagtgaaatacctaaaaggtcttatattttggaacggagggagt 162
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 107 bits (54), Expect = 5e-23
Identities = 133/158 (84%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 5 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64
|||||||| | ||||||||| | ||| || ||||| ||| | |||||||||| |||||
Sbjct: 161 cctccgttccaaaatataagaccttttaggtatttcactagaagactacatacggagcaa 102
Query: 65 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 124
|||||| ||||||| |||||||| ||||||||| |||||||||||||||| | ||||
Sbjct: 101 aatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt-ttatagtac 43
Query: 125 aatctctaaaaagacttatattatggaacggagggagt 162
||||||||||| | |||||||| ||||||||||||||
Sbjct: 42 aatctctaaaaggtcttatatttaggaacggagggagt 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 103 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
||||||||||||| ||||||| ||| |||||| | |||||||| |||||||||||||||
Sbjct: 106 tccgtatgtagtcttctagtgaaatacctaaaaggtcttatattttggaacggagggagt 165
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 107 bits (54), Expect = 5e-23
Identities = 134/158 (84%), Gaps = 7/158 (4%)
Strand = Plus / Minus
Query: 5 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64
|||||||| |||||||||||||| | || |||||| ||| ||||||||||| ||||||
Sbjct: 156 cctccgttcctaaatataagtctctgtagagatttcactat-ggactacatacgaagcaa 98
Query: 65 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 124
||||||||||||||||||||||| | ||||||||| ||||| |||| ||||||
Sbjct: 97 aatgagtgaatctacactctaaaatgcatctatatac-----tatgtggtcc-atagtgg 44
Query: 125 aatctctaaaaagacttatattatggaacggagggagt 162
|||||||| ||||||||||||| ||||||||||||||
Sbjct: 43 aatctctacaaagacttatatttaggaacggagggagt 6
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 105 cgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
|||||||||||| ||||| |||||||| | ||||||||||| ||||||||||||||
Sbjct: 104 cgtatgtagtcca-tagtgaaatctctacagagacttatatttaggaacggagggagt 160
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 83.8 bits (42), Expect = 7e-16
Identities = 132/158 (83%), Gaps = 3/158 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64
|||||||| |||||||||||||||| || |||||| ||| || || |||||| || ||
Sbjct: 10 cctccgttcctaaatataagtctttggagagatttcactatag-accacatacggagaaa 68
Query: 65 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 124
||||||||||||||||| |||| | ||||||||||||||||||| |||| | ||||
Sbjct: 69 aatgagtgaatctacaca-taaaatgcatctatatacatccgtatgtggtccac-agtga 126
Query: 125 aatctctaaaaagacttatattatggaacggagggagt 162
||| |||| |||||||||||| ||||||||||||||
Sbjct: 127 aatatctacgaagacttatatttaggaacggagggagt 164
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 119 tagtggaatctctaaaaagacttatattatggaacggagggagt 162
||||| ||||||| ||||||||||||| ||||||||||||||
Sbjct: 49 tagtgaaatctctccaaagacttatatttaggaacggagggagt 6
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 77.8 bits (39), Expect = 4e-14
Identities = 97/115 (84%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 48 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 107
|||||||||| |||||||||||||||| |||| | ||| |||| ||| ||||||||||
Sbjct: 116 gactacatacggagcaaaatgagtgaatttacatcccaaaatatgactacatacatccgt 57
Query: 108 atgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
||||||| | ||||| |||||||||| | |||||||| ||||||||||||||
Sbjct: 56 atgtagt-ttatagtgagatctctaaaaggtcttatatttaggaacggagggagt 3
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 75.8 bits (38), Expect = 2e-13
Identities = 130/158 (82%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64
|||||||| |||||||||||||||| | |||||| || |||| |||||| || ||
Sbjct: 7 cctccgttcctaaatataagtctttggacagatttcattat-ggaccacatacggagtaa 65
Query: 65 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 124
|||||||||| ||| |||||||| | |||| |||||||||||||| |||| |||||
Sbjct: 66 aatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtcca-tagtga 124
Query: 125 aatctctaaaaagacttatattatggaacggagggagt 162
|||||||| ||||||||||||| |||| |||||||||
Sbjct: 125 aatctctacaaagacttatatttaggaatggagggagt 162
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 103 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
|||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 64 tccgtatgtagtcca-tagtgtaatctctaaaaagacttatatttaggaacggagggagt 6
Score = 65.9 bits (33), Expect = 2e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64
|||||||| ||||||||||||||||| || |||| | ||| ||||||||||| |||||
Sbjct: 10 cctccgttcctaaatataagtctttttagagattacactat-ggactacatacggagcaa 68
Query: 65 aatgagtgaatct 77
|||||||||||||
Sbjct: 69 aatgagtgaatct 81
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 124 gaatctctaaaaagacttatattatggaacggaggg 159
|||||||||||| |||||||||| |||||||||||
Sbjct: 76 gaatctctaaaaggacttatatttaggaacggaggg 111
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 89 tatgtctatatacatccgtatgtagtcctctagtggaatctctaaaaagacttatattat 148
||||||||||||||||||||| |||||| ||| || || ||| |||||||||||||
Sbjct: 79 tatgtctatatacatccgtatatagtccactaatgaaacttctttaaagacttatattta 20
Query: 149 ggaacggagggagt 162
||||||||||||||
Sbjct: 19 ggaacggagggagt 6
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 103 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
||||||||||| | |||||| ||| ||| |||||||||||||| ||||||||||||||
Sbjct: 91 tccgtatgtagactactagtgaaatatcttaaaagacttatatttaggaacggagggagt 150
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 5 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64
|||||||| |||||||||||||||||||| ||||| ||| | |||||||| |||||
Sbjct: 146 cctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacggagcaa 87
Query: 65 aatgagt 71
|||||||
Sbjct: 86 aatgagt 80
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 63.9 bits (32), Expect = 6e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 83 ctaaagtatgtctatatacatccgtatgtagtcctctagtggaatctctaaaaagactta 142
||||| |||||||||||||||||||||||||| | ||||| ||| |||||| | ||||
Sbjct: 87 ctaaaatatgtctatatacatccgtatgtagttc-atagtgtaatacctaaaaggtctta 145
Query: 143 tattatggaacggagggagt 162
|||| ||||||||||||||
Sbjct: 146 tatttaggaacggagggagt 165
Score = 48.1 bits (24), Expect = 4e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 103 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
|||||||||||||| |||| |||| ||||||| | |||||||| ||||||||||||||
Sbjct: 64 tccgtatgtagtcca-tagtagaatttctaaaaggtcttatatttaggaacggagggagt 6
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 102 atccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggag 161
||||||||||||||| |||| |||||| | ||||||||||||| |||||||||||||
Sbjct: 77 atccgtatgtagtccgttagttgaatctttcgaaagacttatatttaggaacggagggag 136
Query: 162 t 162
|
Sbjct: 137 t 137
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 130 ctaaaaagacttatattatggaacggagg 158
|||||||| ||||||||||||||||||||
Sbjct: 80 ctaaaaagtcttatattatggaacggagg 108
>RF01058;MIR806;AP005184.5/84409-84174 39947:Oryza sativa Japonica
Group
Length = 236
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 139 cttatattatggaacggagggagt 162
||||||||||||||||||||||||
Sbjct: 26 cttatattatggaacggagggagt 3
>RF01058;MIR806;AP003960.2/91001-90759 39947:Oryza sativa Japonica
Group
Length = 243
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 139 cttatattatggaacggagggagt 162
||||||||||||||||||||||||
Sbjct: 26 cttatattatggaacggagggagt 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 139 cttatattatggaacggagggag 161
|||||||||||||||||||||||
Sbjct: 218 cttatattatggaacggagggag 240
>RF00906;MIR1122;AK248893.1/1282-1190 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 139 cttatattatggaacggagggagt 162
||||||||||||||||||||||||
Sbjct: 29 cttatattatggaacggagggagt 6
>RF00906;MIR1122;AAAA02012907.1/4650-4807 39946:Oryza sativa Indica
Group
Length = 158
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 139 cttatattatggaacggagggagt 162
||||||||||||||||||||||||
Sbjct: 29 cttatattatggaacggagggagt 6
>RF00906;MIR1122;AACV01009198.1/25225-25351 39947:Oryza sativa
Japonica Group
Length = 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 139 cttatattatggaacggagggagt 162
||||||||||||||||||||||||
Sbjct: 29 cttatattatggaacggagggagt 6
>RF00906;MIR1122;AAAA02007333.1/13137-13002 39946:Oryza sativa
Indica Group
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 cttatattatggaacggagggagt 162
||||||||||||||||||||||||
Sbjct: 108 cttatattatggaacggagggagt 131
>RF00906;MIR1122;AAAA02015085.1/16920-17040 39946:Oryza sativa
Indica Group
Length = 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 128 ctctaaaaagacttatattatggaacggagggagt 162
|||||||| ||||||||||||| |||||||||||
Sbjct: 40 ctctaaaatcacttatattatgggacggagggagt 6
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 44.1 bits (22), Expect = 6e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 105 cgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162
|||||||||||| ||||| ||||| || ||||||||||||| |||| |||||||||
Sbjct: 62 cgtatgtagtccg-tagtgaaatctttagaaagacttatatttaggaaaggagggagt 6
>RF00906;MIR1122;AACV01013085.1/19238-19395 39947:Oryza sativa
Japonica Group
Length = 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 141 tatattatggaacggagggagt 162
||||||||||||||||||||||
Sbjct: 27 tatattatggaacggagggagt 6
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 141 tatattatggaacggagggagt 162
||||||||||||||||||||||
Sbjct: 132 tatattatggaacggagggagt 153
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 137 gacttatattatggaacggagggagt 162
|||||||||| |||||||||||||||
Sbjct: 132 gacttatattgtggaacggagggagt 157
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 137 gacttatattatggaacggagggagt 162
|||||||||| |||||||||||||||
Sbjct: 132 gacttatattgtggaacggagggagt 157
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 137 gacttatattatggaacggagggagt 162
||||||||||||| ||||||||||||
Sbjct: 31 gacttatattatgaaacggagggagt 6
>RF00906;MIR1122;AAAA02000094.1/16089-15933 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 141 tatattatggaacggagggagt 162
||||||||||||||||||||||
Sbjct: 27 tatattatggaacggagggagt 6
