miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;AC155803.26/43739-43832 3880:Medicago truncatula
(barrel medic)
Length = 94
Score = 52.0 bits (26), Expect = 9e-07
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 gggcttctctttgttggcaggaaatga-catgatcatctcatgaaatatcttgccaaagg 59
|||||||||||| |||||||||||| | ||||| ||| ||| | | ||||||||||||
Sbjct: 13 gggcttctctttcttggcaggaaattatcatgaccattccatcatgtgtcttgccaaagg 72
Query: 60 agagttgccc 69
||||||||||
Sbjct: 73 agagttgccc 82
>RF00445;mir-399;AP007308.2/25934-26026 34305:Lotus japonicus
Length = 93
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 tcttgccaaaggagagttgccc 69
||||||||||||||||||||||
Sbjct: 60 tcttgccaaaggagagttgccc 81
>RF00445;mir-399;DQ063659.1/70-185 3702:Arabidopsis thaliana (thale
cress)
Length = 116
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 cttgccaaaggagagttgccc 69
|||||||||||||||||||||
Sbjct: 83 cttgccaaaggagagttgccc 103
>RF00445;mir-399;BABK01105304.1/403-505 34305:Lotus japonicus
Length = 103
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 cttgccaaaggagagttgccc 69
|||||||||||||||||||||
Sbjct: 71 cttgccaaaggagagttgccc 91
