miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00640;MIR167_1;EU548950.1/213-338 3702:Arabidopsis thaliana
(thale cress)
Length = 126
Score = 73.8 bits (37), Expect = 4e-13
Identities = 87/100 (87%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcacgatctaattaactttctttctccgt--ttgt-tttcatgacgatg 57
|||||||||||||| |||||||||| |||||||| ||| | |||| |||||||||||||
Sbjct: 14 tgaagctgccagcatgatctaattagctttctttatcctttgttgtgtttcatgacgatg 73
Query: 58 g-aaagagatgagtgtagattagatcatgtttgcagtttc 96
| ||||||| ||| | |||||||||||||| ||||||||
Sbjct: 74 gttaagagatcagtctcgattagatcatgttcgcagtttc 113
>RF00640;MIR167_1;AC189327.2/282-159 51351:Brassica rapa subsp.
pekinensis
Length = 124
Score = 67.9 bits (34), Expect = 2e-11
Identities = 84/98 (85%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcacgatctaattaactttctttctccgtt-tgttttcatgacgatgg- 58
|||||||||||||| |||||| |||||||| |||||||||| | | | |||||| ||||
Sbjct: 14 tgaagctgccagcatgatctagttaactttatttctccgttgtttatccatgacaatgga 73
Query: 59 aaagagatgagtgtagattagatcatgtttgcagtttc 96
|||| ||| ||||| |||||||||||||| | ||||||
Sbjct: 74 aaagggataagtgtcgattagatcatgttcgtagtttc 111
