miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00640;MIR167_1;ABXC01005647.1/68869-69033 4558:Sorghum bicolor
(sorghum)
Length = 165
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 104 ggaataatgagcatcaggtcatgctgtagttt 135
||||||||||||||||||||||||||||||||
Sbjct: 120 ggaataatgagcatcaggtcatgctgtagttt 151
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctgatg 37
>RF00640;MIR167_1;ABXC01000844.1/72139-72006 4558:Sorghum bicolor
(sorghum)
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctgatg 37
>RF00640;MIR167_1;AP003800.3/19613-19499 39947:Oryza sativa
Japonica Group
Length = 115
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctgatg 37
>RF00640;MIR167_1;CT828788.1/88-212 39946:Oryza sativa Indica
Group
Length = 125
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctgatg 37
