miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01062;MIR812;AP004839.3/78751-78585 39947:Oryza sativa Japonica
Group
Length = 167
Score = 129 bits (65), Expect = 1e-29
Identities = 91/102 (89%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 acaagtcacgcataaaatattaatcatgttttatcatctaacaacaataaaaatacgaat 124
Query: 113 tatnnnnnnntttcatataagacggatagttaaagttggaca 154
||| |||||||||||||||| |||||||||||||||
Sbjct: 125 tataaaaagttttcatataagacggacagttaaagttggaca 166
>RF01062;MIR812;AP008217.1/24300987-24300820 39947:Oryza sativa
Japonica Group
Length = 168
Score = 123 bits (62), Expect = 7e-28
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 59 gacaagtcacgcacaaagtattaatcatgttttatcatctaaccacaataaaaatacgaa 118
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||||||||| || |||||||||||
Sbjct: 119 ttataaaaaaatttcatataagacggacagacaaagttggaca 161
>RF01062;MIR812;AAAA02011207.1/16639-16467 39946:Oryza sativa Indica
Group
Length = 173
Score = 119 bits (60), Expect = 1e-26
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 64 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaa 123
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttgga 152
|||| |||||||||||||||| |||||||||||||
Sbjct: 124 ttataaaaatatttcatataagacggacagttaaagttgga 164
>RF01062;MIR812;AC135924.2/59519-59692 39947:Oryza sativa Japonica
Group
Length = 174
Score = 117 bits (59), Expect = 5e-26
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 acaagtcacgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 124
Query: 113 tat 115
|||
Sbjct: 125 tat 127
>RF01062;MIR812;AAAA02034945.1/15326-15156 39946:Oryza sativa Indica
Group
Length = 171
Score = 117 bits (59), Expect = 5e-26
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 65 aagtcacgcacaaagtattaatcatgttttatcatttaataacaataaaaatacgaatta 124
Query: 115 tnnnnnnntttcatataagacggatagttaaagttggaca 154
| |||||||||||||| | |||||||||||||||
Sbjct: 125 taaaaaactttcatataagacgaacagttaaagttggaca 164
>RF01062;MIR812;AAAA02025501.1/39196-39367 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 63 gacaagtcacgcacaaagtattaatcatgttttatcatctaataacaataaaaatacgaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AAAA02008869.1/419-250 39946:Oryza sativa Indica
Group
Length = 170
Score = 109 bits (55), Expect = 1e-23
Identities = 87/100 (87%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 64 aagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaatta 123
Query: 115 tnnnnnnntttcatataagacggatagttaaagttggaca 154
| |||||||||||||||| ||||||| |||||||
Sbjct: 124 taaaaaaatttcatataagacggacagttaaaattggaca 163
>RF01062;MIR812;AAAA02016531.1/29245-29087 39946:Oryza sativa Indica
Group
Length = 159
Score = 109 bits (55), Expect = 1e-23
Identities = 87/100 (87%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 53 aagtcacgcacaaagtattaatcatgttttatcatctaacaacaataaaagtacgaatta 112
Query: 115 tnnnnnnntttcatataagacggatagttaaagttggaca 154
| ||||||||||||||| | | |||||||||||
Sbjct: 113 taaaaaaatttcatataagacggccaatcaaagttggaca 152
>RF01062;MIR812;CR855235.1/9692-9862 4530:Oryza sativa (rice)
Length = 171
Score = 107 bits (54), Expect = 4e-23
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 62 gacaagtcatgcataaaatattaatcatgtattatcatctaacaacaataaaaatacgaa 121
Query: 112 ttatnnnnnnntttcatataagacgga 138
|||| ||||||||||||||||
Sbjct: 122 ttataaaaaaatttcatataagacgga 148
>RF01062;MIR812;ABRL01000574.1/573-745 65489:Oryza barthii
Length = 173
Score = 107 bits (54), Expect = 4e-23
Identities = 90/103 (87%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| ||
Sbjct: 65 gacaagtcacgcacaaagtattaattatgttttatcatctaacaacaatgaaaatacaaa 124
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| ||||||||||||||| |||||||||||||||
Sbjct: 125 ttataaaaaaa-ttcatataagacggacagttaaagttggaca 166
>RF01062;MIR812;AP008207.1/24461745-24461913 39947:Oryza sativa
Japonica Group
Length = 169
Score = 107 bits (54), Expect = 4e-23
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 60 gacaagtcacgcataaaatattaatcatgttttgtcatctaacaacaataaaaatacaaa 119
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||| | |||||||||||||||||||
Sbjct: 120 ttataaaaaaatttcatataaaatggatagttaaagttggaca 162
>RF01062;MIR812;AP005181.4/139958-139787 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 4e-23
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaataaaaatacgaa 121
Query: 112 ttatnnnnnnntttcatataagacgga 138
|||| ||||||||||||||||
Sbjct: 122 ttataaaaatatttcatataagacgga 148
>RF01062;MIR812;AAAA02030312.1/2463-2304 39946:Oryza sativa Indica
Group
Length = 160
Score = 107 bits (54), Expect = 4e-23
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 51 gacaagtcacgcacaaagtattaatcatgttttatcatctaacaataataaaaatatgaa 110
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| ||||||||| ||||||||| |||||| ||||
Sbjct: 111 ttataaaaaaaattcatataatacggatagtcaaagttagaca 153
>RF01062;MIR812;AACV01017136.1/19656-19829 39947:Oryza sativa
Japonica Group
Length = 174
Score = 107 bits (54), Expect = 4e-23
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 65 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaataaaaatataaa 124
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||||||||| ||| |||||||||||
Sbjct: 125 ttataaaaagttttcatataagacggacagtcaaagttggaca 167
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ccaatgtttgaccgtccgttttatttg 27
|||| ||||||||||||||||||||||
Sbjct: 11 ccaacgtttgaccgtccgttttatttg 37
>RF01062;MIR812;AAAA02011074.1/102896-102725 39946:Oryza sativa
Indica Group
Length = 172
Score = 107 bits (54), Expect = 4e-23
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||| ||| |||||| |||
Sbjct: 63 gacaagtcacgcataaaatattaatcatgttttatcatctaacaataatgaaaatatgaa 122
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||||||||| |||||||||||||||
Sbjct: 123 ttataaaaaaatttcatataagacggacagttaaagttggaca 165
>RF01062;MIR812;AP003569.3/83385-83559 39947:Oryza sativa Japonica
Group
Length = 175
Score = 107 bits (54), Expect = 4e-23
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 62 gacaagtcatgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaa 121
Query: 112 ttatnnnnnnntttcatataagacgga 138
|||| ||||||||||||||||
Sbjct: 122 ttataaaaaaatttcatataagacgga 148
>RF01062;MIR812;AC210446.1/8401-8573 4538:Oryza glaberrima (African
rice)
Length = 173
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtcacgcacaaagtactaatcatgttttatcatctaacaacaataaaaatacgaatta 125
Query: 115 t 115
|
Sbjct: 126 t 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ccaatgtttgaccgtccgttttatttg 27
||||||||||||||||||| |||||||
Sbjct: 11 ccaatgtttgaccgtccgtcttatttg 37
>RF01062;MIR812;AP008216.1/19039953-19040125 39947:Oryza sativa
Japonica Group
Length = 173
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 66 aagtcatgcataaagtattaatcatgttttatcatctaacaacaataaaaatactaatta 125
Query: 115 t 115
|
Sbjct: 126 t 126
>RF01062;MIR812;AACV01005513.1/2329-2490 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 88/101 (87%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 gacaagtcacacataaaatattaatcatgttttatcatctaacaacaataaaaatacgaa 113
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttgga 152
|||| ||| |||||||||||||||| |||||||||
Sbjct: 114 ttataaaaaatttt-atataagacggatagtcaaagttgga 153
>RF01062;MIR812;AP008218.1/26097399-26097570 39947:Oryza sativa
Japonica Group
Length = 172
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 62 gacaagtcatgcataaagtattaatcatgttttatcatctaacaataataaaaatactaa 121
Query: 112 ttat 115
||||
Sbjct: 122 ttat 125
>RF01062;MIR812;AACV01011508.1/1137-1308 39947:Oryza sativa Japonica
Group
Length = 172
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 63 gacaagtcatgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AP008209.1/33733368-33733199 39947:Oryza sativa
Japonica Group
Length = 170
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 64 gacaagtcatgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaa 123
Query: 112 ttat 115
||||
Sbjct: 124 ttat 127
>RF01062;MIR812;AAAA02021854.1/4282-4111 39946:Oryza sativa Indica
Group
Length = 172
Score = 101 bits (51), Expect = 3e-21
Identities = 86/100 (86%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| ||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 66 aagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaattacgaatta 125
Query: 115 tnnnnnnntttcatataagacggatagttaaagttggaca 154
| ||||||||||||||||||| |||||||||||
Sbjct: 126 taagaaaaattcatataagacggatagtcaaagttggaca 165
>RF01062;MIR812;AAAA02003356.1/28581-28752 39946:Oryza sativa Indica
Group
Length = 172
Score = 101 bits (51), Expect = 3e-21
Identities = 86/100 (86%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| || ||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 64 acaagtcacacataaaatattaatcatgttttatcatctaacaataataaaaatacgaat 123
Query: 113 tatnnnnnnntttcatataagacggatagttaaagttgga 152
||| |||||||||||||||| ||| |||||||||
Sbjct: 124 tataaaaaaatttcatataagacggacagtcaaagttgga 163
>RF01062;MIR812;AACV01023241.1/21629-21456 39947:Oryza sativa
Japonica Group
Length = 174
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 acaagtcacgcataaaatattaatcatgttttatcatctaacaacaataaaaatacgaat 125
Query: 113 tat 115
|||
Sbjct: 126 tat 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ccaatgtttgaccgtccgttttatttg 27
|||| ||||||||||||||||||||||
Sbjct: 11 ccaacgtttgaccgtccgttttatttg 37
>RF01062;MIR812;AAAA02028402.1/15431-15259 39946:Oryza sativa Indica
Group
Length = 173
Score = 99.6 bits (50), Expect = 1e-20
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 64 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatatgaa 123
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||||||||| | | |||||||||||
Sbjct: 124 ttataaaaaaatttcatataagacggacaatcaaagttggaca 166
>RF01062;MIR812;AAAA02010831.1/27324-27153 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||||| ||| |||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 63 gacaagtcatgcataaaatattaatcatattttatcatctaacaataataaaaatgcgaa 122
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| || |||||||||||| |||||||||||||||
Sbjct: 123 ttataaaaaaaatttatataagacggacagttaaagttggaca 165
>RF01062;MIR812;AP008210.1/20128856-20129021 39947:Oryza sativa
Japonica Group
Length = 166
Score = 99.6 bits (50), Expect = 1e-20
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| || ||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 57 gacaagtcacacataaaatattaatcatgttttatcatctaacaacaataaaaatataaa 116
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||| ||||||||| |||||||||||
Sbjct: 117 ttataaaaaaatttcatataaaacggatagtcaaagttggaca 159
>RF01062;MIR812;AAAA02023310.1/41630-41795 39946:Oryza sativa Indica
Group
Length = 166
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaataaaaatacgaa 122
Query: 112 tt 113
||
Sbjct: 123 tt 124
>RF01062;MIR812;AAAA02005297.1/10788-10961 39946:Oryza sativa Indica
Group
Length = 174
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 54 caagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatt 113
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 67 caagtcatgcataaagtattaattatgttttatcatctaacaacaataaaaatactaatt 126
Query: 114 at 115
||
Sbjct: 127 at 128
>RF01062;MIR812;AC125784.1/17256-17084 39947:Oryza sativa Japonica
Group
Length = 173
Score = 99.6 bits (50), Expect = 1e-20
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||| || |||||||||||||||||||||||||||||||
Sbjct: 64 gacaagtcacgcataaaatattaattatattttatcatctaacaacaataaaaatacgaa 123
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||| ||||| ||| |||||||||||
Sbjct: 124 ttataaaaaaatttcatataaaacggacagtcaaagttggaca 166
>RF01062;MIR812;AAAA02011064.1/31317-31486 39946:Oryza sativa Indica
Group
Length = 170
Score = 99.6 bits (50), Expect = 1e-20
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcata 129
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 79 tattaatcatgttttatcatctaacaacaataaaaatacgaattataaaaaaatttcata 138
Query: 130 taagacggatagttaaagttgga 152
|||||| | |||||||||||||
Sbjct: 139 taagaccaacagttaaagttgga 161
>RF01062;MIR812;AAAA02025838.1/29287-29116 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| || |||||||||||||||||||||||||||| ||||||||||
Sbjct: 63 gacaagtcacgcataaaatactaatcatgttttatcatctaacaacaatgaaaatacgaa 122
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| ||| |||||| ||||| |||||||||||||||
Sbjct: 123 ttataaaaattttttatataaaacggacagttaaagttggaca 165
>RF01062;MIR812;AACV01017020.1/6219-6047 39947:Oryza sativa Japonica
Group
Length = 173
Score = 99.6 bits (50), Expect = 1e-20
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 64 gacaagtcatgcataaaatattaattatgttttattatctaacaacaataaaaatacaaa 123
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| ||| |||||||||||| |||| ||||||||||
Sbjct: 124 ttataaaaaaattttatataagacggacagttgaagttggaca 166
>RF01062;MIR812;AP008210.1/33278540-33278369 39947:Oryza sativa
Japonica Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||||| ||| |||||||||| ||||||||| |||||||||| |||||| |||
Sbjct: 63 gacaagtcatgcataaaatattaatcatattttatcatttaacaacaatgaaaatatgaa 122
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||||||||| ||| |||||||||||
Sbjct: 123 ttataaaaaaatttcatataagacggacagtcaaagttggaca 165
>RF01062;MIR812;AAAA02006994.1/5327-5498 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| || ||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 63 gacaagtcacacataaaatattaatcatgttttatcatctaacaacaataaaaatacaaa 122
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||||||||| ||| |||||| ||||
Sbjct: 123 ttataaaataatttcatataagacggacagtcaaagttagaca 165
>RF01058;MIR806;AACV01023222.1/20864-20622 39947:Oryza sativa
Japonica Group
Length = 243
Score = 99.6 bits (50), Expect = 1e-20
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 146 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaa 87
Query: 112 ttatnnnnnnntttcatataagacgga 138
|||| ||||||||||||||||
Sbjct: 86 ttataaaaaaatttcatataagacgga 60
>RF01062;MIR812;AACV01013047.1/1490-1661 39947:Oryza sativa Japonica
Group
Length = 172
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 66 aagtcacgcacaaagtattaatcatgttttatcatctaacaccaataaaaatacaaatta 125
Query: 115 t 115
|
Sbjct: 126 t 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ccaatgtttgaccgtccgttttatttg 27
||||||||||||||||||| |||||||
Sbjct: 11 ccaatgtttgaccgtccgtcttatttg 37
>RF01062;MIR812;AAAA02012237.1/9154-8991 39946:Oryza sativa Indica
Group
Length = 164
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 aagtcacgcataaagtattaatcatgttttatcatctaacaacaataaaaatactaatta 120
Query: 115 t 115
|
Sbjct: 121 t 121
>RF01062;MIR812;AAAA02028890.1/13277-13446 39946:Oryza sativa Indica
Group
Length = 170
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatac 108
||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaataaaaatac 121
>RF01062;MIR812;AAAA02034122.1/2047-1872 39946:Oryza sativa Indica
Group
Length = 176
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 70 aagtcaagcataaagtattaatcatgttttatcatctaacaacaataaaaatactaatta 129
Query: 115 t 115
|
Sbjct: 130 t 130
>RF01062;MIR812;AAAA02027711.1/35151-34982 39946:Oryza sativa Indica
Group
Length = 170
Score = 97.6 bits (49), Expect = 4e-20
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| | | ||| ||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 62 acaagtcaagtataaaatattaatcatgttttattatctaacaacaataaaaatataaat 121
Query: 113 tatnnnnnnntttcatataagacggatagttaaagttggaca 154
||| |||||||||||||||| |||||||||||||||
Sbjct: 122 tataaaaaaatttcatataagacggacagttaaagttggaca 163
>RF01062;MIR812;AP005558.3/35527-35699 39947:Oryza sativa Japonica
Group
Length = 173
Score = 97.6 bits (49), Expect = 4e-20
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 64 acaagtcacgcataaagtattaatcatgttttatcatctaacaacaattaaaatactaat 123
Query: 113 tatnnnnnnntttcatataagacggatagt 142
||| |||||||||||||||||||
Sbjct: 124 tataaaaaaaattcatataagacggatagt 153
>RF01062;MIR812;AP008210.1/22759381-22759209 39947:Oryza sativa
Japonica Group
Length = 173
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 67 aagtcatgcataaagtattaatcatattttatcatctaacaacaataaaaatactaatta 126
Query: 115 t 115
|
Sbjct: 127 t 127
>RF01062;MIR812;AAAA02017694.1/27567-27412 39946:Oryza sativa Indica
Group
Length = 156
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 aagtcacgcataaaatattaatcatgttttatcatctaacaacaataaaaatacgaatta 112
Query: 115 t 115
|
Sbjct: 113 t 113
>RF01062;MIR812;AP008207.1/2886556-2886408 39947:Oryza sativa
Japonica Group
Length = 149
Score = 97.6 bits (49), Expect = 4e-20
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 77 catgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcatataagacg 136
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 65 catgttttatcatctaacaacaataaaaatacgaattataaaaaaatttcatataagacg 124
Query: 137 gatagttaaagttggaca 154
|| |||||||||| ||||
Sbjct: 125 gacagttaaagttagaca 142
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ccaatgtttgaccgtccgttttattt 26
|||||||||||| |||||||||||||
Sbjct: 11 ccaatgtttgactgtccgttttattt 36
>RF01062;MIR812;AP005105.3/7970-7799 39947:Oryza sativa Japonica
Group
Length = 172
Score = 97.6 bits (49), Expect = 4e-20
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||| ||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 acaaatcacgcataaaatattaatcatgttttatcatctaacaacaataaaaatacgaat 123
Query: 113 tatnnnnnnntttcatataagacggatagttaaagttggaca 154
||| ||| ||||||||| || ||| |||||||||||
Sbjct: 124 tataaaaaaattttatataagacagacagtcaaagttggaca 165
>RF01062;MIR812;AAAA02022482.1/7486-7314 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 63 gacaagtaatgtataaagtattaatcatgttttatcatctaacaacaataaaaataccaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AAAA02003725.1/40989-40818 39946:Oryza sativa Indica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcata 129
|||||||||||||||||| |||||||||||| ||||| |||||||| ||| |||
Sbjct: 81 tattaatcatgttttatcctctaacaacaatgaaaattcgaattataaaaaatttttata 140
Query: 130 taagacggatagttaaagttggaca 154
|||||||||||||||||||||||||
Sbjct: 141 taagacggatagttaaagttggaca 165
>RF01062;MIR812;AAAA02017051.1/13343-13514 39946:Oryza sativa Indica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcata 129
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 81 tattaatcatgttttatcatctaacaacaataaaaatatgaattataaaaaaaattcata 140
Query: 130 taagacggatagttaaagttggaca 154
|||||| || |||||||||||||||
Sbjct: 141 taagacagacagttaaagttggaca 165
>RF01062;MIR812;AACV01009421.1/27858-27673 39947:Oryza sativa
Japonica Group
Length = 186
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaa 120
Query: 112 ttat 115
||||
Sbjct: 121 ttat 124
>RF01062;MIR812;AACV01022814.1/38520-38687 39947:Oryza sativa
Japonica Group
Length = 168
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 62 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaa 121
Query: 112 ttat 115
||||
Sbjct: 122 ttat 125
>RF01062;MIR812;AAAA02009156.1/724-890 39946:Oryza sativa Indica
Group
Length = 167
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 60 gacaagtcacacataaagtattaatcatgttttatcatctaacaacaataaaaatactaa 119
Query: 112 ttat 115
||||
Sbjct: 120 ttat 123
>RF01062;MIR812;AAAA02027448.1/29868-29697 39946:Oryza sativa Indica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
|||||||||| || |||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 61 gacaagtcatacataaagtattaatcatgttttatcatctaataacaataaaaatactaa 120
Query: 112 ttat 115
||||
Sbjct: 121 ttat 124
>RF01062;MIR812;AAAA02015015.1/195-368 39946:Oryza sativa Indica
Group
Length = 174
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 64 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaa 123
Query: 112 ttat 115
||||
Sbjct: 124 ttat 127
>RF01062;MIR812;AP008207.1/31376785-31376955 39947:Oryza sativa
Japonica Group
Length = 171
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 63 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AC210491.1/137316-137488 4538:Oryza glaberrima
(African rice)
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||| ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 64 gacaaatcatgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaa 123
Query: 112 ttat 115
||||
Sbjct: 124 ttat 127
>RF01062;MIR812;AP006554.2/95701-95531 39947:Oryza sativa Japonica
Group
Length = 171
Score = 95.6 bits (48), Expect = 2e-19
Identities = 87/101 (86%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 64 aagtcacgcataaagtattaatcacgttttatcatctaacaacaatgaaaatactaatta 123
Query: 115 tnnnnnnntttcatataagacggatagttaaa-gttggaca 154
| |||||||||||||||| ||||||| ||||||||
Sbjct: 124 taaaaaaatttcatataagacggacagttaaatgttggaca 164
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ccaatgtttgaccgtccgttttatttg 27
|||| ||||||||||||||||||||||
Sbjct: 11 ccaacgtttgaccgtccgttttatttg 37
>RF01062;MIR812;AP003735.4/10519-10356 39947:Oryza sativa Japonica
Group
Length = 164
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 54 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaa 113
Query: 112 ttat 115
||||
Sbjct: 114 ttat 117
>RF01062;MIR812;AAAA02000425.1/85094-84923 39946:Oryza sativa Indica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 62 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaa 121
Query: 112 ttat 115
||||
Sbjct: 122 ttat 125
>RF01062;MIR812;AACV01020364.1/24044-23870 39947:Oryza sativa
Japonica Group
Length = 175
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 64 gacaaatcacgcataaagtattaatcatgttttatcatctaacaacaataaaaatactaa 123
Query: 112 ttat 115
||||
Sbjct: 124 ttat 127
>RF01062;MIR812;AAAA02001056.1/25017-25191 39946:Oryza sativa Indica
Group
Length = 175
Score = 95.6 bits (48), Expect = 2e-19
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnnttt 125
|||||||||||||||||||||||||||| ||| |||||||||| |||||| |||
Sbjct: 79 aaagtattaatcatgttttatcatctaataaccataaaaatactaattataaaaaaattt 138
Query: 126 catataagacggatagttaaa 146
|||||||||||||||||||||
Sbjct: 139 catataagacggatagttaaa 159
>RF01062;MIR812;AP008215.1/14591818-14591646 39947:Oryza sativa
Japonica Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 63 gacaaatcatgcttaaagtattaatcatgttttatcatctaacaacaataaaaatactaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AC118980.2/109065-108896 39947:Oryza sativa Japonica
Group
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcata 129
||||||||||||||||| ||||||||||||| |||||||||||||| |||||||
Sbjct: 79 tattaatcatgttttatgatctaacaacaatgaaaatacgaattataaaaaaatttcata 138
Query: 130 taagacggatagttaaagttggaca 154
||||||||| ||| |||||||||||
Sbjct: 139 taagacggacagtcaaagttggaca 163
>RF01062;MIR812;AAAA02006505.1/7967-8136 39946:Oryza sativa Indica
Group
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 62 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacgataaaaatacgaa 121
Query: 112 ttat 115
||||
Sbjct: 122 ttat 125
>RF01062;MIR812;AP003747.5/95528-95357 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 81/93 (87%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 63 cacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnn 122
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 73 cacaaagtattaatcatgttttatcatctaacaataataaaaatactaattataaaaaaa 132
Query: 123 tttcatataagacggatagt-taaagttggaca 154
|||||||||||||||| ||| |||||||||||
Sbjct: 133 tttcatataagacggagagtcaaaagttggaca 165
>RF01062;MIR812;AACV01010622.1/22790-22965 39947:Oryza sativa
Japonica Group
Length = 176
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaata 107
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaataaaaata 121
>RF01062;MIR812;AC087797.5/112603-112434 4530:Oryza sativa (rice)
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 64 gacaagtcacgtataaagtattaatcatgttttatcatctaacaacaataaaaatactaa 123
Query: 112 ttat 115
||||
Sbjct: 124 ttat 127
>RF01062;MIR812;AACV01018464.1/1129-1300 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 63 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AC210447.1/75470-75299 4538:Oryza glaberrima
(African rice)
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 63 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AL442112.2/44626-44797 4530:Oryza sativa (rice)
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || |||
Sbjct: 63 gacaagtcacgcacaaagtattaatcatgttttatcatctaacaataataaaattatgaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AP003865.2/95745-95574 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| |||||||| |||||||||| |||||||||||||||||||||||||| |||
Sbjct: 63 gacaagtcacgcacaaagcattaatcatgctttatcatctaacaacaataaaaatatgaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AAAA02007779.1/5073-5244 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 64 acaagtcacgcataaagtattaatcatgttttatcatctgacaccaataaaaatacgaat 123
Query: 113 tat 115
|||
Sbjct: 124 tat 126
>RF01062;MIR812;AACV01005232.1/20210-20383 39947:Oryza sativa
Japonica Group
Length = 174
Score = 93.7 bits (47), Expect = 7e-19
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 65 caaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 76 caaagtattaatcatattttatcatctaacaacaataaaaatacgaattat 126
>RF01062;MIR812;AAAA02009928.1/18502-18661 39946:Oryza sativa Indica
Group
Length = 160
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 53 acaagtcacgcataaagtattaatcatattttatcatctaacaacaataaaaatactaat 112
Query: 113 tat 115
|||
Sbjct: 113 tat 115
>RF01062;MIR812;AAAA02027004.1/10445-10616 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 7e-19
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| |||| |||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 64 aagtcacgcataaagaattaatcatgttttatcatctaacaacaatgaaaatactaatta 123
Query: 115 tnnnnnnntttcatataagacggatagttaaa 146
| |||||||||||||||| |||||||
Sbjct: 124 taaaaaattttcatataagacggacagttaaa 155
>RF01062;MIR812;AAAA02017418.1/23307-23138 39946:Oryza sativa Indica
Group
Length = 170
Score = 93.7 bits (47), Expect = 7e-19
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcata 129
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 80 tattaatcatgttttatcatctaacaacaataaaaatacgaattat-aaaaaatttcata 138
Query: 130 taagacggatagttaaagttggaca 154
||||||||| | |||||||| ||||
Sbjct: 139 taagacggacaattaaagttagaca 163
>RF01062;MIR812;AACV01002189.1/17402-17236 39947:Oryza sativa
Japonica Group
Length = 167
Score = 93.7 bits (47), Expect = 7e-19
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| |||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 63 aagtcacgcataaaatattaatcatgttttatcctctaacaacaatgaaaatacgaatta 122
Query: 115 tnnnnnnntttcatataagacggatagttaaagttggaca 154
| ||||||||||||||| |||||||||| ||||
Sbjct: 123 taaaaaaatttcatataagacgggcagttaaagttagaca 162
>RF01062;MIR812;AAAA02005181.1/37543-37377 39946:Oryza sativa Indica
Group
Length = 167
Score = 93.7 bits (47), Expect = 7e-19
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 61 aagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatattaatta 120
Query: 115 tnnnnnnntttcatataagacggatagt 142
| ||||||||||||||||||||
Sbjct: 121 taaaaaaatttcatataagacggatagt 148
>RF01062;MIR812;AACV01016097.1/11993-12168 39947:Oryza sativa
Japonica Group
Length = 176
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 68 acaagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaat 127
Query: 113 tat 115
|||
Sbjct: 128 tat 130
>RF01062;MIR812;AAAA02034277.1/2944-2773 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 7e-19
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 66 aagtcatgcataaaatattaatcatgttttatcatctaacaacaatgaaaatactaatta 125
Query: 115 tnnnnnnntttcatataagacgga 138
| ||||||||||||||||
Sbjct: 126 taaaaaaatttcatataagacgga 149
>RF01058;MIR806;AP004630.3/83094-82852 39947:Oryza sativa Japonica
Group
Length = 243
Score = 93.7 bits (47), Expect = 7e-19
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 143 aagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaatta 84
Query: 115 tnnnnnnntttcatataagacgga 138
| ||||||||||||||||
Sbjct: 83 taaaaaaatttcatataagacgga 60
>RF01062;MIR812;AC137930.3/58399-58568 39947:Oryza sativa Japonica
Group
Length = 170
Score = 91.7 bits (46), Expect = 3e-18
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||| ||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 gacaaatcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaa 120
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| ||||||||||||||| | | |||||||||||
Sbjct: 121 ttataaaaaaaattcatataagacggacaatcaaagttggaca 163
>RF01062;MIR812;AACV01021873.1/15988-15824 39947:Oryza sativa
Japonica Group
Length = 165
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 70 aaagtattaatcatgttttatcatctaacaacaataaaaatactaattat 119
>RF01062;MIR812;AP008215.1/20364714-20364886 39947:Oryza sativa
Japonica Group
Length = 173
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 63 gacaagtcacgcataaagtattaattatgttttatcatctaacaacaataaaaatactaa 122
Query: 112 tt 113
||
Sbjct: 123 tt 124
>RF01062;MIR812;AACV01012712.1/9325-9155 39947:Oryza sativa Japonica
Group
Length = 171
Score = 91.7 bits (46), Expect = 3e-18
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| || ||| |||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 62 gacaagtcacacataaaatattaatcatgttttatcatctaacatcaatgaaaatacgaa 121
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||||||||| | ||||| |||||||
Sbjct: 122 ttataaaaaaatttcatataagacggacaattaaaattggaca 164
>RF01062;MIR812;AAAA02004309.1/6851-7023 39946:Oryza sativa Indica
Group
Length = 173
Score = 91.7 bits (46), Expect = 3e-18
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 64 gacaagtcacgtataaaatattaatcatgttttatcatctaacaacaataaaaatacaaa 123
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| | |||||||| ||||| ||| |||||||||||
Sbjct: 124 ttataaaaaaatatcatataaaacggacagtcaaagttggaca 166
>RF01062;MIR812;AP005385.3/119099-118929 39947:Oryza sativa Japonica
Group
Length = 171
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 76 aaagtattaatcatgttttatcatctaacaacaataaaaatactaattat 125
>RF01062;MIR812;AAAA02021409.1/31003-31169 39946:Oryza sativa Indica
Group
Length = 167
Score = 91.7 bits (46), Expect = 3e-18
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| |||||||||| ||||||||||||| |||||||||||||| ||
Sbjct: 58 gacaagtcacgcataaaatattaatcatattttatcatctaataacaataaaaatacaaa 117
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||| ||| | |||||||||||||||
Sbjct: 118 ttataaaaaattttcatataaaacgaacagttaaagttggaca 160
>RF01062;MIR812;AP004080.3/114837-115009 39947:Oryza sativa Japonica
Group
Length = 173
Score = 91.7 bits (46), Expect = 3e-18
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 63 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaataataa 122
Query: 112 ttatnnnnnnntttcatataagacgga 138
|||| ||||||||||||||||
Sbjct: 123 ttataaaaaaatttcatataagacgga 149
>RF01062;MIR812;AP008207.1/2254376-2254214 39947:Oryza sativa
Japonica Group
Length = 163
Score = 91.7 bits (46), Expect = 3e-18
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 59 gacaagtcaggcataaagtattaatcatgttttatcatctaacaataataaaaatattaa 118
Query: 112 ttatnnnnnnntttcatataagacggatagt 142
|||| ||| ||||||||||||||||
Sbjct: 119 ttataaaaaagttttatataagacggatagt 149
>RF01062;MIR812;AAAA02000644.1/36638-36809 39946:Oryza sativa Indica
Group
Length = 172
Score = 91.7 bits (46), Expect = 3e-18
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 64 acaaagtattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnnt 123
|||||||||||||||| ||||||||||||||| ||||||||||| ||||||| |
Sbjct: 75 acaaagtattaatcatattttatcatctaacatcaataaaaatatgaattataaaaaaat 134
Query: 124 ttcatataagacggatagttaaagttggaca 154
||||||||||||||| ||| ||| |||||||
Sbjct: 135 ttcatataagacggacagtcaaaattggaca 165
>RF01062;MIR812;AACV01015062.1/1605-1435 39947:Oryza sativa Japonica
Group
Length = 171
Score = 91.7 bits (46), Expect = 3e-18
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
|||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 64 gacaagtcatacataaaatattaatcatgttttatcatctaccaacaataaaaatactaa 123
Query: 112 ttatnnnnnnntttcatataagacgga 138
|||| ||||||||||||||||
Sbjct: 124 ttataaaaggatttcatataagacgga 150
>RF01062;MIR812;AACV01008129.1/23508-23343 39947:Oryza sativa
Japonica Group
Length = 166
Score = 91.7 bits (46), Expect = 3e-18
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||| ||| ||| ||| ||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 57 gacaaatcacgcataaaatattaatcatgttttatcatctaacaataatgaaaatacgaa 116
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| ||||||||||||||| ||||||||||||||
Sbjct: 117 ttataaaaaaatttcatataagacgggccgttaaagttggaca 159
>RF01062;MIR812;AAAA02035063.1/37916-38088 39946:Oryza sativa Indica
Group
Length = 173
Score = 91.7 bits (46), Expect = 3e-18
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 64 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaa 123
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
||| ||| |||||||||||| ||| ||| |||||||
Sbjct: 124 atataaaaaagttttatataagacggacagtcaaaattggaca 166
>RF01062;MIR812;AAAA02014389.1/23071-22898 39946:Oryza sativa Indica
Group
Length = 174
Score = 91.7 bits (46), Expect = 3e-18
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 64 gacaagtcacacataaagtattaatcatgttttatcatctaacaataataaaaatactaa 123
Query: 112 ttatnnnnnnntttcatataagacggatagttaaa 146
|||| ||||||||||||| || |||||||
Sbjct: 124 ttataaaaaaatttcatataagacagacagttaaa 158
>RF01062;MIR812;AACV01012040.1/494-660 39947:Oryza sativa Japonica
Group
Length = 167
Score = 91.7 bits (46), Expect = 3e-18
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| ||| ||||||| ||||||||||||||||||||||| |||||| ||||||
Sbjct: 61 aagtcatgcataaaatattaataatgttttatcatctaacaacaatgaaaatatgaatta 120
Query: 115 tnnnnnnntttcatataagacggatagttaaagttggac 153
| |||||||||||||||| ||| ||| ||||||
Sbjct: 121 taaaaaaatttcatataagacggacagtcaaaattggac 159
>RF01062;MIR812;AAAA02020747.1/30289-30456 39946:Oryza sativa Indica
Group
Length = 168
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 65 acaagtcacgcataaaatattaatcatgttttatcatctaacaacaataaaaatacaaat 124
Query: 113 ta 114
||
Sbjct: 125 ta 126
>RF01062;MIR812;AP003311.2/19569-19396 39947:Oryza sativa Japonica
Group
Length = 174
Score = 91.7 bits (46), Expect = 3e-18
Identities = 88/103 (85%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 65 acaagtctcgcataaagtgttaatcatgttttatcatctaacaacaatgaaaatactaat 124
Query: 113 tatnnnnnnntttcatataagacggatagttaaa-gttggaca 154
||| |||||||||||||| ||||||||| ||||||||
Sbjct: 125 tataaaaaaatttcatataagacgtatagttaaacgttggaca 167
>RF01062;MIR812;AP006169.3/145377-145206 39947:Oryza sativa Japonica
Group
Length = 172
Score = 91.7 bits (46), Expect = 3e-18
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||| | ||| ||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 63 gacaagtcatgaataaaatattaatcatgttttatcatctaacaataatgaaaatacgaa 122
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| | |||||||||| |||||||||||||||||
Sbjct: 123 ttataaaaaaaaattatataagacgaatagttaaagttggaca 165
>RF01062;MIR812;AP008217.1/4404306-4404135 39947:Oryza sativa
Japonica Group
Length = 172
Score = 91.7 bits (46), Expect = 3e-18
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| |||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 63 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaacgaaaatacaaa 122
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|| | ||||||||||||||||| || |||||||||||
Sbjct: 123 ttgtaaaaaaatttcatataagacggatggtcaaagttggaca 165
>RF01062;MIR812;AAAA02020957.1/2475-2646 39946:Oryza sativa Indica
Group
Length = 172
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 67 aagtcacgcataaagtattaatcatgttttatcatctaacaataataaaaatactaatta 126
Query: 115 t 115
|
Sbjct: 127 t 127
>RF01062;MIR812;AAAA02007471.1/36137-35965 39946:Oryza sativa Indica
Group
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 64 acaagtcacgcataaagtattagtcatgttttatcatctaacaacaataaaaataataat 123
Query: 113 tatnnnnnnntttcatataagacgga 138
||| ||||||||||||||||
Sbjct: 124 tataaaaaaatttcatataagacgga 149
>RF01062;MIR812;AAAA02027656.1/20954-21126 39946:Oryza sativa Indica
Group
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||| ||||||| ||| |||| || |||||||||||||||| ||||||||||||||||||
Sbjct: 65 acaaatcatgcataaaatatttattatgttttatcatctaataacaataaaaatacgaat 124
Query: 113 tatnnnnnnntttcatataagacggatagttaaagttggaca 154
||| |||||||||||||||| ||| |||||| ||||
Sbjct: 125 tataaaaaaatttcatataagacggacagtcaaagttagaca 166
>RF01062;MIR812;AC078829.10/782-954 39947:Oryza sativa Japonica
Group
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaat-aaaaatacga 110
||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 62 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaaatacta 121
Query: 111 attat 115
|||||
Sbjct: 122 attat 126
>RF01062;MIR812;AAAA02019237.1/36164-36339 39946:Oryza sativa Indica
Group
Length = 176
Score = 89.7 bits (45), Expect = 1e-17
Identities = 90/107 (84%), Gaps = 4/107 (3%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatc----taacaacaataaaaata 107
||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 63 gacaagtcatgcataaaatattaatcatgttttatcatctaagtaacaacaatgaaaata 122
Query: 108 cgaattatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||||||| |||||||||| ||||||||| |||||| ||||
Sbjct: 123 cgaattataaaaaaatttcatataaaacggatagtcaaagttagaca 169
>RF01062;MIR812;AAAA02000606.1/14373-14200 39946:Oryza sativa Indica
Group
Length = 174
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 67 aagtcacgcataaaatattaatcatgttttatcatctaacaacaataaaaatactaatta 126
Query: 115 t 115
|
Sbjct: 127 t 127
>RF01062;MIR812;AACV01012495.1/12258-12093 39947:Oryza sativa
Japonica Group
Length = 166
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatac 108
||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 58 gacaagtcatgcataaagtattaatcatgttttatcatctaacaataatgaaaatac 114
>RF01062;MIR812;AP004679.3/40209-40379 39947:Oryza sativa Japonica
Group
Length = 171
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 65 aagtcacgcataaagtattaatcatattttatcatctaacaacaataaaaatactaatta 124
Query: 115 t 115
|
Sbjct: 125 t 125
>RF01062;MIR812;AC122149.2/46861-46700 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 55 aagtcacgcataaagtattattcatgttttatcatctaacaacaataaaaatactaatta 114
Query: 115 t 115
|
Sbjct: 115 t 115
>RF01062;MIR812;AC069158.6/136626-136465 4530:Oryza sativa (rice)
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 59 aagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaatta 118
Query: 115 t 115
|
Sbjct: 119 t 119
>RF01062;MIR812;CR855160.1/12972-13144 4530:Oryza sativa (rice)
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaata 107
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtcacgcataaagtattaatcatgttttatcatctaacaacaataaaaata 118
>RF01062;MIR812;AACV01011144.1/32835-32664 39947:Oryza sativa
Japonica Group
Length = 172
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatac 108
||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 63 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatac 119
>RF01062;MIR812;AY946579.1/194-35 4530:Oryza sativa (rice)
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 79/91 (86%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 51 gacaagtcacgcataaagttttaatcatggtttatcatctaacaacaataaaaatactaa 110
Query: 112 ttatnnnnnnntttcatataagacggatagt 142
|||| ||||||||||||||||||||
Sbjct: 111 ttat-aaaaaatttcatataagacggatagt 140
>RF01062;MIR812;AP003233.3/24422-24591 39947:Oryza sativa Japonica
Group
Length = 170
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 64 aagtcacgcataaagtattaattatgttttatcatctaacaacaataaaaatactaatta 123
Query: 115 t 115
|
Sbjct: 124 t 124
>RF01062;MIR812;AAAA02004223.1/3166-3338 39946:Oryza sativa Indica
Group
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgtttt-atcatctaacaacaataaaaatacga 110
||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 63 gacaagtcatgcataaattattaatcatgtttttatcatctaacaacaataaaaatacta 122
Query: 111 attat 115
|||||
Sbjct: 123 attat 127
>RF01062;MIR812;AACV01005029.1/2849-2681 39947:Oryza sativa Japonica
Group
Length = 169
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 64 aagtcatgcataaaatattaatcatgttttatcatctaacaacaatgaaaatactaatta 123
Query: 115 t 115
|
Sbjct: 124 t 124
>RF01062;MIR812;AAAA02007472.1/19258-19088 39946:Oryza sativa Indica
Group
Length = 171
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
|||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtcacgcataaaatattaatcatgttttatcatctaacaacaataaaaatacgaa 122
>RF01062;MIR812;AP008210.1/32704455-32704304 39947:Oryza sativa
Japonica Group
Length = 152
Score = 89.7 bits (45), Expect = 1e-17
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 72 ttaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcatata 131
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 71 ttaatcatgttttatcatctaacaacaataaaaatacgaattataaaaaaattttatata 130
Query: 132 agacggatagttaaagtt 149
||||||| ||| ||||||
Sbjct: 131 agacggacagtcaaagtt 148
>RF01062;MIR812;AP008213.1/25129604-25129774 39947:Oryza sativa
Japonica Group
Length = 171
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 65 aagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaatta 124
Query: 115 t 115
|
Sbjct: 125 t 125
>RF01062;MIR812;AC068950.11/131301-131469 39947:Oryza sativa
Japonica Group
Length = 169
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaata 107
|||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 65 aagtcatgcataaagtattaatcatgttttatcatctaacagcaataaaaata 117
>RF01062;MIR812;AAAA02028215.1/3688-3522 39946:Oryza sativa Indica
Group
Length = 167
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaata 107
||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 62 gacaagtcatgcataaaatattaatcatgttttatcatctaataacaataaaaata 117
>RF01062;MIR812;AK100615.1/4071-4241 39947:Oryza sativa Japonica
Group
Length = 171
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
|||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 62 gacaagtcgcgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaa 121
Query: 112 ttat 115
||||
Sbjct: 122 ttat 125
>RF01062;MIR812;AP008215.1/15621529-15621700 39947:Oryza sativa
Japonica Group
Length = 172
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 63 gacaagtcacgcataaaatattaatcatgttttatcatctaacaataatgaaaatacgaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AP005286.3/99063-99232 39947:Oryza sativa Japonica
Group
Length = 170
Score = 87.7 bits (44), Expect = 4e-17
Identities = 91/105 (86%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaat-aaaaatacga 110
||||||||| ||| |||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 60 gacaagtcacgcataaagtattaatcatattttatcatctaacaacaatgaaaaatacta 119
Query: 111 attatnnnnnnntttcatataagacggatagttaaa-gttggaca 154
||||| ||||||||||||||||||||||| ||||||||
Sbjct: 120 attataaaaaaa-ttcatataagacggatagttaaacgttggaca 163
>RF01062;MIR812;AP005323.3/37469-37638 39947:Oryza sativa Japonica
Group
Length = 170
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
|||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 63 gacaagtcatacataaaatattaatcatgctttatcatctaacaacaataaaaatacaaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AAAA02019445.1/2141-1970 39946:Oryza sativa Indica
Group
Length = 172
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||| |||
Sbjct: 62 gacaagtcatgcataaaatattaatcatgttttatcatctgacaataataaaaataggaa 121
Query: 112 ttat 115
||||
Sbjct: 122 ttat 125
>RF01062;MIR812;AP008212.1/25694612-25694784 39947:Oryza sativa
Japonica Group
Length = 173
Score = 87.7 bits (44), Expect = 4e-17
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnnttt 125
||||||||||||||||||||||||||||||| ||||||||||| |||||| |||
Sbjct: 77 aaagtattaatcatgttttatcatctaacaataataaaaatactaattataaaaaaattt 136
Query: 126 catataagacgga 138
|||||||||||||
Sbjct: 137 catataagacgga 149
>RF01062;MIR812;AP005575.3/42422-42604 39947:Oryza sativa Japonica
Group
Length = 183
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||| | ||| ||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 63 gacaagttacgcataaaatattaattatgttttatcatctaacaacaataaaaatacgaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ccaatgtttgaccgtccgttttattt 26
||||||||||||||||||| ||||||
Sbjct: 11 ccaatgtttgaccgtccgtcttattt 36
>RF01062;MIR812;AAAA02025750.1/4831-4660 39946:Oryza sativa Indica
Group
Length = 172
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 62 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatatgaa 121
Query: 112 ttat 115
||||
Sbjct: 122 ttat 125
>RF01062;MIR812;AAAA02006190.1/10867-10698 39946:Oryza sativa Indica
Group
Length = 170
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| || ||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 61 gacaagtcacacataaaatattaatcatgttttatcatctaacaacaataaaaatactaa 120
Query: 112 ttat 115
||||
Sbjct: 121 ttat 124
>RF01062;MIR812;ABRL01000628.1/965-795 65489:Oryza barthii
Length = 171
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
|||||| || ||| ||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 62 gacaagccacgcataaaatattaatcatgttttatcatctaataacaataaaaatacgaa 121
Query: 112 ttat 115
||||
Sbjct: 122 ttat 125
>RF01062;MIR812;AY459337.1/40919-41091 39947:Oryza sativa Japonica
Group
Length = 173
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 63 gacaagttacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AACV01005345.1/14066-14232 39947:Oryza sativa
Japonica Group
Length = 167
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| |||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 58 gacaagtcacgcataaaatattaatcatgttttatcatttaacaacaatgaaaatacgaa 117
Query: 112 ttat 115
||||
Sbjct: 118 ttat 121
>RF01062;MIR812;AACV01010470.1/5477-5651 39947:Oryza sativa Japonica
Group
Length = 175
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaata 107
||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 64 gacaagtcatgcataaagtattaatcatgttttatcatccaacaacactaaaaata 119
>RF01062;MIR812;AP008216.1/21152191-21152361 39947:Oryza sativa
Japonica Group
Length = 171
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaata 107
||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaataaaaata 118
>RF01062;MIR812;AL606706.3/33946-33779 39947:Oryza sativa Japonica
Group
Length = 168
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 59 gacaagtcacgcataaaatattaattatgttttatcatttaacaacaataaaaatacgaa 118
Query: 112 ttat 115
||||
Sbjct: 119 ttat 122
>RF01062;MIR812;AACV01009994.1/18616-18451 39947:Oryza sativa
Japonica Group
Length = 166
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 63 gacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacaaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AC093018.4/120107-120279 39947:Oryza sativa Japonica
Group
Length = 173
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||||||||| ||| ||||||| ||
Sbjct: 63 gacaagtcacgcataaagtattaatcatgttttatcatctaacaataatgaaaatactaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AAAA02004132.1/21064-21235 39946:Oryza sativa Indica
Group
Length = 172
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 62 gacaagtcacgcataaagtattaatcatgttttatcatccaacaataataaaaatactaa 121
Query: 112 ttat 115
||||
Sbjct: 122 ttat 125
>RF01062;MIR812;AAAA02007264.1/5078-5247 39946:Oryza sativa Indica
Group
Length = 170
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||| |||||||||||||||||| |||||||||||| ||
Sbjct: 61 gacaagtcacgcataaagtattaattatgttttatcatctaacaccaataaaaatactaa 120
Query: 112 ttat 115
||||
Sbjct: 121 ttat 124
>RF01062;MIR812;AAAA02006502.1/2129-2297 39946:Oryza sativa Indica
Group
Length = 169
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||||||||||||| ||| ||| ||
Sbjct: 60 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaagtactaa 119
Query: 112 ttat 115
||||
Sbjct: 120 ttat 123
>RF01062;MIR812;AAAA02011393.1/44665-44505 39946:Oryza sativa Indica
Group
Length = 161
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
|||||| || ||| ||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 52 gacaagccacgcataaaatattaatcatgttttatcatctaacaacaataaaaatactaa 111
Query: 112 ttat 115
||||
Sbjct: 112 ttat 115
>RF01062;MIR812;AP005192.3/73866-73703 39947:Oryza sativa Japonica
Group
Length = 164
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| |||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 55 gacaagtcacgcataaaatattaatcatgttttatcatttaacaataataaaaatacgaa 114
Query: 112 ttat 115
||||
Sbjct: 115 ttat 118
>RF01062;MIR812;AP008209.1/1236224-1236395 39947:Oryza sativa
Japonica Group
Length = 172
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 63 gacaagtcacgtataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AAAA02004880.1/722-543 39946:Oryza sativa Indica
Group
Length = 180
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| |||||||||||||||| |||||||||||||||||| ||||||| ||
Sbjct: 71 gacaagtcacgcataaagtattaatcatgtgttatcatctaacaacaatgaaaatactaa 130
Query: 112 ttat 115
||||
Sbjct: 131 ttat 134
>RF01062;MIR812;AAAA02010236.1/1499-1669 39946:Oryza sativa Indica
Group
Length = 171
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| | | ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 62 gacaagtcacgtataaagtattaatcatgttttatcatctaacaacaatgaaaatactaa 121
Query: 112 ttat 115
||||
Sbjct: 122 ttat 125
>RF01062;MIR812;ABRL01001199.1/16150-16320 65489:Oryza barthii
Length = 171
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||
Sbjct: 61 gacaaatcatgcataaagtattaatcatgttttatcatctaacaataatgaaaatactaa 120
Query: 112 ttat 115
||||
Sbjct: 121 ttat 124
>RF01062;MIR812;AAAA02026762.1/1806-1977 39946:Oryza sativa Indica
Group
Length = 172
Score = 87.7 bits (44), Expect = 4e-17
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnnttt 125
||||||||||| ||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 76 aaagtattaattatgttttatcatctaacaacaataaaaatactaattataaaaaaattt 135
Query: 126 catataagacgga 138
|||||||||||||
Sbjct: 136 catataagacgga 148
>RF01062;MIR812;AP004096.3/87024-86851 39947:Oryza sativa Japonica
Group
Length = 174
Score = 87.7 bits (44), Expect = 4e-17
Identities = 86/101 (85%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||
Sbjct: 67 aagtcacgcataaagtattaattatgttttatcatctaacaacaatgaaaatactaatta 126
Query: 115 tnnnnnnntttcatataagacggatagttaaa-gttggaca 154
| ||||||||||||| || ||||||| ||||||||
Sbjct: 127 taaaaaaatttcatataagactgacagttaaacgttggaca 167
>RF01062;MIR812;AAAA02024544.1/2132-1963 39946:Oryza sativa Indica
Group
Length = 170
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| | | |||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 63 gacaagtcacgtataaagtattaatcatgttttatcatttaacaacaataaaaatactaa 122
Query: 112 ttat 115
||||
Sbjct: 123 ttat 126
>RF01062;MIR812;AP003343.3/23253-23423 39947:Oryza sativa Japonica
Group
Length = 171
Score = 87.7 bits (44), Expect = 4e-17
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcata 129
||||||| |||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 80 tattaattatgttttatcatctaataacaataaaaatacgaattataaaaaaaattcata 139
Query: 130 taagacggatagttaaagttggaca 154
||||||||| |||||||||| ||||
Sbjct: 140 taagacggacagttaaagtttgaca 164
>RF01062;MIR812;AAAA02022338.1/14062-13900 39946:Oryza sativa Indica
Group
Length = 163
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||| || || ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 54 gacaagttattcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaa 113
Query: 112 ttat 115
||||
Sbjct: 114 ttat 117
>RF01062;MIR812;AP008207.1/41972899-41972733 39947:Oryza sativa
Japonica Group
Length = 167
Score = 87.7 bits (44), Expect = 4e-17
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnnttt 125
||||||||||| ||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 75 aaagtattaattatgttttatcatctaacaacaataaaaatactaattataaaaaaattt 134
Query: 126 catataagacgga 138
|||||||||||||
Sbjct: 135 catataagacgga 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ccaatgtttgaccgtccgttttatttg 27
||||||||||||||||||| |||||||
Sbjct: 9 ccaatgtttgaccgtccgtcttatttg 35
>RF01062;MIR812;AAAA02033468.1/29491-29659 39946:Oryza sativa Indica
Group
Length = 169
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||
Sbjct: 60 gacaagtcatgcataaagtattaatcatgttttatcatctaacagtaatgaaaatactaa 119
Query: 112 ttat 115
||||
Sbjct: 120 ttat 123
>RF01062;MIR812;AAAA02000821.1/44381-44541 39946:Oryza sativa Indica
Group
Length = 161
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||| ||| ||| |||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 51 gacaattcacgcataaagtattaatcatgttttatcctctaacaacaataaaaatactaa 110
Query: 112 ttat 115
||||
Sbjct: 111 ttat 114
>RF01062;MIR812;AACV01010788.1/18077-17904 39947:Oryza sativa
Japonica Group
Length = 174
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||||| ||||||| ||||||| ||
Sbjct: 64 gacaagtcacgcataaagtattaatcatgttttatcatctatcaacaatgaaaatactaa 123
Query: 112 ttat 115
||||
Sbjct: 124 ttat 127
>RF01062;MIR812;AP008215.1/20982507-20982338 39947:Oryza sativa
Japonica Group
Length = 170
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| | | ||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 62 gacaagtcacgtataaaatattaatcatgtttaatcatctaacaacaataaaaatacgaa 121
Query: 112 ttat 115
||||
Sbjct: 122 ttat 125
>RF01062;MIR812;AAAA02025464.1/17500-17659 39946:Oryza sativa Indica
Group
Length = 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||| ||||||||||||||||||| ||| ||||||| |||||
Sbjct: 53 aagtcacgcataaagtattaattatgttttatcatctaacaataatgaaaatactaatta 112
Query: 115 tnnnnnnntttcatataagacggatagt 142
| ||||||||||||||||||||
Sbjct: 113 taaaaaaatttcatataagacggatagt 140
>RF01062;MIR812;ABRL01000506.1/17407-17249 65489:Oryza barthii
Length = 159
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaa 105
|||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtcacgcataaagtattaatcatgttttatcatctaacaacaataaaaa 117
>RF01062;MIR812;AP003255.3/99511-99348 39947:Oryza sativa Japonica
Group
Length = 164
Score = 85.7 bits (43), Expect = 2e-16
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 57 aagtcatgcataaagtattaatcatgttttatcatctaacaacaatggaaatattaatta 116
Query: 115 tnnnnnnntttcatataagacgga 138
| ||||||||||||||||
Sbjct: 117 taaaaaaatttcatataagacgga 140
>RF01062;MIR812;AAAA02021902.1/36247-36421 39946:Oryza sativa Indica
Group
Length = 175
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| || ||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 66 acaagtcacacataaagtattaatcatgttttatcatctaacaacaatcaaaatactaat 125
Query: 113 tat 115
|||
Sbjct: 126 tat 128
>RF01062;MIR812;AACV01005009.1/62385-62557 39947:Oryza sativa
Japonica Group
Length = 173
Score = 85.7 bits (43), Expect = 2e-16
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaa-caataaaaatacga 110
||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 63 gacaagtcacacacaaagtattaatcatgttttatcatctaataaccaataaaaatacga 122
Query: 111 attatnnnnnnntttcatataagacggatagttaaagttggaca 154
|| | |||||||||||||||| | | |||||||||||
Sbjct: 123 tttttaaaaaaatttcatataagacggacattcaaagttggaca 166
>RF01062;MIR812;AAAA02004149.1/31942-31772 39946:Oryza sativa Indica
Group
Length = 171
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| ||| ||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 62 acaagtcacgcataaaatattaattatgttttatcatgtaacaacaataaaaatacgaat 121
Query: 113 tat 115
|||
Sbjct: 122 tat 124
>RF01062;MIR812;AACV01019971.1/2544-2716 39947:Oryza sativa Japonica
Group
Length = 173
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatac 108
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 aaagtattaatcatgttttatcatctaacaacaataaaaatac 119
>RF01062;MIR812;AP004300.3/59831-59999 39947:Oryza sativa Japonica
Group
Length = 169
Score = 85.7 bits (43), Expect = 2e-16
Identities = 72/83 (86%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 72 ttaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcatata 131
|||||||||||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 82 ttaatcatgttttatcatctaa--acaataaaaatacgaattataaaaaaattttatata 139
Query: 132 agacggatagttaaagttggaca 154
||||||| |||||||||||||||
Sbjct: 140 agacggacagttaaagttggaca 162
>RF01062;MIR812;AP008208.1/25323174-25323345 39947:Oryza sativa
Japonica Group
Length = 172
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| ||| ||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 64 acaagtcacgcataaaatattaatcatgttttatcatctaacaataatgaaaatacgaat 123
Query: 113 tat 115
|||
Sbjct: 124 tat 126
>RF01062;MIR812;AP008208.1/33690985-33691155 39947:Oryza sativa
Japonica Group
Length = 171
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||||||| |||| ||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 63 acaagtcatgcataaagcattaatcatgttttatcatttaacaataataaaaatactaat 122
Query: 113 tat 115
|||
Sbjct: 123 tat 125
>RF01062;MIR812;AP008209.1/6612427-6612602 39947:Oryza sativa
Japonica Group
Length = 176
Score = 85.7 bits (43), Expect = 2e-16
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| ||||||||||| ||||||||||||||| ||| ||||||| |||||
Sbjct: 67 aagtcaagcataaaatattaatcatgctttatcatctaacaataatgaaaatacaaatta 126
Query: 115 tnnnnnnntttcatataagacggatagttaaagttggaca 154
| |||||||||||||||| ||| |||||||||||
Sbjct: 127 taaaaaaatttcatataagacggacagtcaaagttggaca 166
>RF01062;MIR812;AP006756.2/41932-41763 39947:Oryza sativa Japonica
Group
Length = 170
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaata 107
|||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 acaagtcacgcataaagtattaattatgttttatcatctaacaacaataaaaata 115
>RF01062;MIR812;AAAA02032801.1/16435-16606 39946:Oryza sativa Indica
Group
Length = 172
Score = 85.7 bits (43), Expect = 2e-16
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcata 129
||||||||||||||||||||||||||||||| |||||| ||||||| |||||||
Sbjct: 81 tattaatcatgttttatcatctaacaacaatgaaaataagaattataaaaaaatttcata 140
Query: 130 taagacggatagttaaagtt 149
||||||||| ||| ||||||
Sbjct: 141 taagacggacagtcaaagtt 160
>RF01062;MIR812;AAAA02013508.1/19572-19400 39946:Oryza sativa Indica
Group
Length = 173
Score = 85.7 bits (43), Expect = 2e-16
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||||| | ||| |||||||||| |||||| |||||||||| || ||||||||||
Sbjct: 64 gacaagtcatgaataaaatattaatcatattttattatctaacaacgatgaaaatacgaa 123
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttgg 151
|||| |||||||||||||||| ||||||| ||||
Sbjct: 124 ttataaaaaaatttcatataagacggacagttaaaattgg 163
>RF01062;MIR812;AAAA02000975.1/32267-32093 39946:Oryza sativa Indica
Group
Length = 175
Score = 85.7 bits (43), Expect = 2e-16
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| |||||||||||||| ||||||||||||| |||||| ||||||| |||||
Sbjct: 66 aagtcatgcataaagtattaatcatattttatcatctaataacaatgaaaatactaatta 125
Query: 115 tnnnnnnntttcatataagacgga 138
| ||||||||||||||||
Sbjct: 126 taaaaaaatttcatataagacgga 149
>RF01062;MIR812;AAAA02007387.1/34016-33845 39946:Oryza sativa Indica
Group
Length = 172
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/84 (86%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 71 attaatcatgttttatcatctaacaacaataaaaatacgaattat-nnnnnnntttcata 129
||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 81 attaatcatattttatcatctaacaacaataaaaatacgaattataaaaaaaatttcata 140
Query: 130 taagacggatagttaaagttggac 153
||||||||| | ||||||||||||
Sbjct: 141 taagacggacaattaaagttggac 164
>RF01062;MIR812;AAAA02000408.1/7732-7564 39946:Oryza sativa Indica
Group
Length = 169
Score = 85.7 bits (43), Expect = 2e-16
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| |||||||||||||||||||| |||||||||| ||||||| ||| ||
Sbjct: 59 gacaagtcacgcataaagtattaatcatgttttaccatctaacaataataaaattactaa 118
Query: 112 ttatnnnnnnntttcatataagacggatagttaaa-gttggaca 154
|||| ||||||||||||||||||| ||| ||||||||
Sbjct: 119 ttataaaaaaaattcatataagacggatagtcaaacgttggaca 162
>RF01062;MIR812;AAAA02007192.1/3192-3022 39946:Oryza sativa Indica
Group
Length = 171
Score = 85.7 bits (43), Expect = 2e-16
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaat-aaaaatacga 110
||||||||| || ||| |||||||||| |||||||||||||||||||| ||||||| ||
Sbjct: 61 gacaagtcacacataaaatattaatcatattttatcatctaacaacaatgaaaaatatga 120
Query: 111 attatnnnnnnntttcatataagacggatagttaaagttggaca 154
||||| ||| ||||||||| ||||||||||||||||||
Sbjct: 121 attataaaaaatttttatataagacagatagttaaagttggaca 164
>RF01062;MIR812;AAAA02008143.1/37666-37495 39946:Oryza sativa Indica
Group
Length = 172
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| | | ||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 64 acaagtcacgtataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaat 123
Query: 113 tat 115
|||
Sbjct: 124 tat 126
>RF01062;MIR812;AP008207.1/33077508-33077680 39947:Oryza sativa
Japonica Group
Length = 173
Score = 85.7 bits (43), Expect = 2e-16
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||| | ||| ||| ||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 63 gacaagttacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatactaa 122
Query: 112 ttatnnnnnnntttcatataagacggatagttaaa-gttggaca 154
|||| |||||||||||||||| |||||| ||||||||
Sbjct: 123 ttataaaaaaatttcatataagacggacggttaaacgttggaca 166
>RF01062;MIR812;AP002913.1/39280-39449 39947:Oryza sativa Japonica
Group
Length = 170
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| ||| ||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 63 acaagtcacgcataaaatattaatcatgttttatcatctaacaataatgaaaatacgaat 122
Query: 113 tat 115
|||
Sbjct: 123 tat 125
>RF01062;MIR812;AAAA02002644.1/11064-11244 39946:Oryza sativa Indica
Group
Length = 181
Score = 83.8 bits (42), Expect = 6e-16
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| |||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 64 gacaagtcacgcataaaatattaatcatgttttatcatctcacaataatgaaaatacgaa 123
Query: 112 ttatnnnnnnntttcatataagacgga 138
|||| ||||||||||||||||
Sbjct: 124 ttataaaaaaatttcatataagacgga 150
>RF01062;MIR812;AAAA02013778.1/13361-13197 39946:Oryza sativa Indica
Group
Length = 165
Score = 83.8 bits (42), Expect = 6e-16
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| || ||| |||||| |||||||||||||||||| ||||| ||||||||||
Sbjct: 56 gacaagtcacgcgtaaaatattaaccatgttttatcatctaaccacaatgaaaatacgaa 115
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||||||||| ||| |||||| ||||
Sbjct: 116 ttataaaaaaatttcatataagacggacagtcaaagttagaca 158
>RF01062;MIR812;AAAA02007753.1/15767-15936 39946:Oryza sativa Indica
Group
Length = 170
Score = 83.8 bits (42), Expect = 6e-16
Identities = 83/99 (83%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 61 gacaagtcacgtataaaatattaatcatgttttatcatctaacaacaatgaaaatacaaa 120
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttg 150
|||| ||| |||||||||||| ||| |||||||
Sbjct: 121 ttataaaaagattttatataagacggacagtaaaagttg 159
>RF01062;MIR812;AAAA02025804.1/30970-30800 39946:Oryza sativa Indica
Group
Length = 171
Score = 83.8 bits (42), Expect = 6e-16
Identities = 81/95 (85%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 60 atgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnn 119
||||| ||| |||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 71 atgcataaaatattaa-catattttatcatctaacaacaataaaaatacgaattataaaa 129
Query: 120 nnntttcatataagacggatagttaaagttggaca 154
|||||||||||||||| ||| ||| |||||||
Sbjct: 130 aaatttcatataagacggacagtcaaaattggaca 164
>RF01062;MIR812;ABRL01001185.1/1878-2045 65489:Oryza barthii
Length = 168
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 79 tattaatcatgttttatcatctaacaacaatgaaaatacgaattat 124
>RF01062;MIR812;AAAA02026239.1/39734-39565 39946:Oryza sativa Indica
Group
Length = 170
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 74 aaagtattaatcatgttttatcatctaacaacaatgaaaatactaattat 123
>RF01062;MIR812;AAAA02023254.1/232-406 39946:Oryza sativa Indica
Group
Length = 175
Score = 83.8 bits (42), Expect = 6e-16
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| |||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 66 gacaagtcacgcataaaatattaatcatattttatcatctaacaacaacgaaaatacgaa 125
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||||||| ||| |||||||||||
Sbjct: 126 ttataaaaaaaaatcatataagacggacagtcaaagttggaca 168
>RF01062;MIR812;AAAA02030404.1/51970-52141 39946:Oryza sativa Indica
Group
Length = 172
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 76 aaagtattaatcatgttttatcatctaacaacaatgaaaatactaattat 125
>RF01062;MIR812;AACV01014086.1/6692-6862 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 6e-16
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| ||||||| ||||||||||||||||||||||| ||||||| ||||
Sbjct: 65 aagtcaagcataaaatattaattatgttttatcatctaacaacaatgaaaatacaaattt 124
Query: 115 tnnnnnnntttcatataagacggatagttaaagtt 149
| |||||||||||||||| ||||||||||
Sbjct: 125 ttaaaaaatttcatataagacggacagttaaagtt 159
>RF01062;MIR812;AAAA02004518.1/57142-57313 39946:Oryza sativa Indica
Group
Length = 172
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
|||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 77 aaagtattaatcatattttatcatctaacaacaataaaaatactaattat 126
>RF01062;MIR812;AP005099.2/121922-122093 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 77 aaagtattaatcatgttttatcatctaacaacaatgaaaatactaattat 126
>RF01062;MIR812;AAAA02017523.1/1914-2075 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 67 aaagtattaatcatgttttatcatctaacaacaatgaaaatactaattat 116
>RF01062;MIR812;AACV01011133.1/24244-24412 39947:Oryza sativa
Japonica Group
Length = 169
Score = 83.8 bits (42), Expect = 6e-16
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| || ||| ||||||||||| ||||| |||||||||||||||||||| ||
Sbjct: 60 gacaagtcacacataaaatattaatcatgctttattatctaacaacaataaaaatataaa 119
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| ||||||||||||| || |||||||||||||||
Sbjct: 120 ttataaaaaaatttcatataagacagacagttaaagttggaca 162
>RF01062;MIR812;AP004886.3/56394-56566 39947:Oryza sativa Japonica
Group
Length = 173
Score = 83.8 bits (42), Expect = 6e-16
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaata 107
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 aaagtattaatcatgttttatcatctaacaacaataaaaata 120
>RF01062;MIR812;AAAA02003495.1/3364-3531 39946:Oryza sativa Indica
Group
Length = 168
Score = 83.8 bits (42), Expect = 6e-16
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaata 107
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aaagtattaatcatgttttatcatctaacaacaataaaaata 114
>RF01062;MIR812;AP004118.4/14932-14762 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 6e-16
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| | |||||||||||||||||||||||| |||||||| ||||||| ||
Sbjct: 63 gacaagtcacgcatagagtattaatcatgttttatcatctgacaacaatgaaaatactaa 122
Query: 112 ttatnnnnnnntttcatataagacgga 138
|||| ||||||||||||||||
Sbjct: 123 ttataaaaaaatttcatataagacgga 149
>RF01062;MIR812;AP008214.1/26216581-26216410 39947:Oryza sativa
Japonica Group
Length = 172
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
|||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 77 aaagtattcatcatgttttatcatctaacaacaataaaaatactaattat 126
>RF01062;MIR812;AAAA02017200.1/46356-46526 39946:Oryza sativa Indica
Group
Length = 171
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 80 tattaatcatgttttatcatctaacaacaatgaaaatacgaattat 125
>RF01062;MIR812;AP008215.1/3125803-3125975 39947:Oryza sativa
Japonica Group
Length = 173
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 58 tcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 69 tcatgcataaagtattaatcatgttttatcatctaacactaataaaaatactaattat 126
>RF01062;MIR812;AACV01003858.1/16873-16701 39947:Oryza sativa
Japonica Group
Length = 173
Score = 83.8 bits (42), Expect = 6e-16
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| ||| | ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 66 aagtcatgcataaaattttaatcatgttttatcatctaacaacaatgaaaatatgaatta 125
Query: 115 tnnnnnnntttcatataagacggatagttaaagtt 149
| |||| ||||||||||| ||| ||||||
Sbjct: 126 taaaaaaatttcttataagacggacagtcaaagtt 160
>RF01062;MIR812;AP008218.1/17990520-17990350 39947:Oryza sativa
Japonica Group
Length = 171
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
|||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 76 aaagtattcatcatgttttatcatctaacaacaataaaaatactaattat 125
>RF01062;MIR812;AACV01020168.1/4005-4178 39947:Oryza sativa Japonica
Group
Length = 174
Score = 83.8 bits (42), Expect = 6e-16
Identities = 87/103 (84%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||||| | ||| |||| ||||||||||||||||||| |||||| |||||||||||
Sbjct: 65 acaagtcatgtataaaatatttatcatgttttatcatctaataacaatgaaaatacgaat 124
Query: 113 tat-nnnnnnntttcatataagacggatagttaaagttggaca 154
||| |||||||||||||||| ||| |||||||||||
Sbjct: 125 tataaaaaaaatttcatataagacggacagtcaaagttggaca 167
>RF01062;MIR812;AAAA02000457.1/4375-4547 39946:Oryza sativa Indica
Group
Length = 173
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 78 aaagtattaataatgttttatcatctaacaacaataaaaatactaattat 127
>RF01062;MIR812;AACV01007961.1/33452-33616 39947:Oryza sativa
Japonica Group
Length = 165
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 71 aaagtattaattatgttttatcatctaacaacaataaaaatactaattat 120
>RF01062;MIR812;CR855135.1/1917-2075 4530:Oryza sativa (rice)
Length = 159
Score = 83.8 bits (42), Expect = 6e-16
Identities = 81/95 (85%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| ||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 54 aagtcacgcataaaatattaattatgttttatcatctaacaacaatgaaaatacgaatta 113
Query: 115 tnnnnnnntttcatataagacggatagttaaagtt 149
| ||| |||||||||||| ||||||||||
Sbjct: 114 taaaaaatttt-atataagacggacagttaaagtt 147
>RF01062;MIR812;ABRL01000748.1/10750-10922 65489:Oryza barthii
Length = 173
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 54 caagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatt 113
||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 65 caagtcacgcataaagtattaatcatgttttatcatctaacaacaatggaaatactaatt 124
Query: 114 at 115
||
Sbjct: 125 at 126
>RF01062;MIR812;AP003573.3/128560-128732 39947:Oryza sativa Japonica
Group
Length = 173
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 77 aaagtattaataatgttttatcatctaacaacaataaaaatactaattat 126
>RF01062;MIR812;AL606602.2/131959-132130 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 6e-16
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||| | ||| ||| |||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 63 gacaagttacgcataaaatattaatcatgttttatcatctaacagtaatgaaaatacgaa 122
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| ||| |||||||||||| ||| |||||||||||
Sbjct: 123 ttataaaaaatttttatataagacggacagtcaaagttggaca 165
>RF01062;MIR812;AC210486.3/67976-67803 4538:Oryza glaberrima
(African rice)
Length = 174
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 82 tattaatcatgttttatcatctaacaacaatgaaaatacgaattat 127
>RF01062;MIR812;AAAA02030302.1/9784-9957 39946:Oryza sativa Indica
Group
Length = 174
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
|||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 78 aaagtattaatcatattttatcatctaacaacaataaaaatactaattat 127
>RF01062;MIR812;AAAA02028537.1/1825-1993 39946:Oryza sativa Indica
Group
Length = 169
Score = 83.8 bits (42), Expect = 6e-16
Identities = 87/103 (84%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| | | ||| ||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 61 gacaagtcacgtataaaatattaatcatgttttatcatctaacaa-aataaaaatatgaa 119
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| ||||||||||||| || ||||||||||||||
Sbjct: 120 ttataaaaaaatttcatataagacagactgttaaagttggaca 162
>RF01062;MIR812;AP004620.3/119304-119132 39947:Oryza sativa Japonica
Group
Length = 173
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 83 tattaatcatgttttatcatctaacaacaataaaaatactaattat 128
>RF01062;MIR812;AP003794.4/118366-118195 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 80 tattaatcatgttttatcatctaacaacaatgaaaatacgaattat 125
>RF01062;MIR812;AL606459.5/164965-165130 4530:Oryza sativa (rice)
Length = 166
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 72 aaagtattaatcatgttttatcatctaacaacaattaaaatactaattat 121
>RF01062;MIR812;AACV01016567.1/43099-42929 39947:Oryza sativa
Japonica Group
Length = 171
Score = 83.8 bits (42), Expect = 6e-16
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| || ||| ||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 62 gacaagtcacacataaaatattaattatgttttatcatctaacaacaatgaaaatacgaa 121
Query: 112 ttatnnnnnnntttcatataagacgga 138
|||| ||||||||||||||||
Sbjct: 122 ttataaaaaaatttcatataagacgga 148
>RF01062;MIR812;AC092389.4/14259-14090 39947:Oryza sativa Japonica
Group
Length = 170
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatac 108
|||||||||| ||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 66 aagtcatgcataaagtattattcatgttttatcatctaacaataataaaaatac 119
>RF01062;MIR812;AP005735.3/106241-106410 39947:Oryza sativa Japonica
Group
Length = 170
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 74 aaagtattaatcatgttttatcatctaacaataataaaaatactaattat 123
>RF01062;MIR812;AP008211.1/19810407-19810236 39947:Oryza sativa
Japonica Group
Length = 172
Score = 83.8 bits (42), Expect = 6e-16
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||| | ||| ||| |||||||||||||||||||||||||||| || ||||||||||
Sbjct: 64 gacaagttacgcataaaatattaatcatgttttatcatctaacaacgatgaaaatacgaa 123
Query: 112 ttatnnnnnnntttcatataagacgga 138
|||| ||||||||||||||||
Sbjct: 124 ttataaaaaattttcatataagacgga 150
>RF01062;MIR812;AP008215.1/21325950-21325780 39947:Oryza sativa
Japonica Group
Length = 171
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80 tattaatcatgttttatcatctaacaacaataaaaatacaaattat 125
>RF01062;MIR812;AC137928.3/69023-68852 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 77 aaagtattaatcatgttttatcatctaacaataataaaaatactaattat 126
>RF01062;MIR812;AAAA02002100.1/4948-5119 39946:Oryza sativa Indica
Group
Length = 172
Score = 83.8 bits (42), Expect = 6e-16
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||| | ||| ||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 63 gacaagttacgcataaaatattaatcatgttttattatctaccaacaataaaaatacgaa 122
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||| || |||| ||||| |||||||
Sbjct: 123 ttataaaaaaatttcatataaaacagataattaaaattggaca 165
>RF01062;MIR812;AACV01002066.1/3011-2839 39947:Oryza sativa Japonica
Group
Length = 173
Score = 83.8 bits (42), Expect = 6e-16
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| |||||||||| |||||||||||||||| |||||||||| |||
Sbjct: 64 gacaagtcacgcataaaatattaatcatattttatcatctaacaaaaataaaaatatgaa 123
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| ||| |||||| ||||| |||||||||| ||||
Sbjct: 124 ttataaaaaatttttatataaaacggacagttaaagttagaca 166
>RF01062;MIR812;AP003704.3/36938-37111 39947:Oryza sativa Japonica
Group
Length = 174
Score = 83.8 bits (42), Expect = 6e-16
Identities = 90/106 (84%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatc--taacaacaataaaaatacg 109
||||||||| ||| ||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 62 gacaagtcacgcataaagtattaatcatgttttatcatctataacaacaatgaaaatact 121
Query: 110 aattatnnnnnnntttcatataagacggatagttaaa-gttggaca 154
|||||| |||||||||||||||| ||| ||| ||||||||
Sbjct: 122 aattataaaaaaatttcatataagacggacagtaaaacgttggaca 167
>RF01062;MIR812;AAAA02020382.1/15042-15213 39946:Oryza sativa Indica
Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| || |||||||||||||||||||||||||||| |||||| |||
Sbjct: 63 gacaagtcacgcataaaataataatcatgttttatcatctaacaacaatgaaaataggaa 122
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggac 153
|||| || |||| ||||||| ||||||||||||||
Sbjct: 123 ttataaaaaaactttatatgagacggacagttaaagttggac 164
>RF01062;MIR812;AAAA02003633.1/7146-7318 39946:Oryza sativa Indica
Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaata 107
|||||| ||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 66 aagtcacgcataaagtattaatcatgttttattatctaacaacaataaaaata 118
>RF01062;MIR812;AACV01005785.1/15229-15400 39947:Oryza sativa
Japonica Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 66 aagtcacgcataaagtattaattatgttttatcatctaacaataataaaaatactaatta 125
Query: 115 t 115
|
Sbjct: 126 t 126
>RF01062;MIR812;AAAA02006832.1/44030-44202 39946:Oryza sativa Indica
Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| |||||||||||||||||||||||| |||||||||| ||||||| |||||
Sbjct: 67 aagtcacgcataaagtattaatcatgttttatcatttaacaacaatgaaaatactaatta 126
Query: 115 t 115
|
Sbjct: 127 t 127
>RF01062;MIR812;AACV01014691.1/269-98 39947:Oryza sativa Japonica
Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| |||||||||||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 66 aagtcacgcataaagtattaatcatattttatcatctaacaataataaaaatactaatta 125
Query: 115 t 115
|
Sbjct: 126 t 126
>RF01062;MIR812;AP008214.1/25482476-25482305 39947:Oryza sativa
Japonica Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| | ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 66 aagtcacgcataaaatgttaatcatgttttatcatctaacaacaataaaaatactaatta 125
Query: 115 t 115
|
Sbjct: 126 t 126
>RF01062;MIR812;AAAA02036402.1/899-1069 39946:Oryza sativa Indica
Group
Length = 171
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| |||||||||||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 66 aagtcacgcataaagtattaatcatgttttatcatctgacaacaatgaaaatactaatta 125
Query: 115 t 115
|
Sbjct: 126 t 126
>RF01062;MIR812;AAAA02017391.1/13558-13727 39946:Oryza sativa Indica
Group
Length = 170
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| |||||||||||||||||||||||||||| || ||||||||||| |||||
Sbjct: 64 aagtcacgcataaagtattaatcatgttttatcatctaataaaaataaaaatactaatta 123
Query: 115 t 115
|
Sbjct: 124 t 124
>RF01062;MIR812;AAAA02003779.1/4494-4325 39946:Oryza sativa Indica
Group
Length = 170
Score = 81.8 bits (41), Expect = 3e-15
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| || ||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 62 gacaagtcacgcatgaaatattaatcatgttttatcatctagcaacaatgaaaatacgaa 121
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagtt 149
|||| |||||||||||||| | ||| ||||||
Sbjct: 122 ttataaaaaaatttcatataagacgaacagtcaaagtt 159
>RF01062;MIR812;AP004064.3/112165-112000 39947:Oryza sativa Japonica
Group
Length = 166
Score = 81.8 bits (41), Expect = 3e-15
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnnttt 125
|||||||||||||| |||||||||||||||||||| ||||||| |||||| |||
Sbjct: 77 aaagtattaatcatattttatcatctaacaacaatgaaaatactaattataaaaaaattt 136
Query: 126 catataagacggatagtt 143
|||||||||||||||||
Sbjct: 137 tatataagacggatagtt 154
>RF01062;MIR812;EF557314.1/393-562 39946:Oryza sativa Indica Group
Length = 170
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| |||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 68 aagtcacgcataaaatattaatcatgttttatcatctcacaacaatgaaaatacgaatta 127
Query: 115 t 115
|
Sbjct: 128 t 128
>RF01062;MIR812;AACV01019045.1/6084-5913 39947:Oryza sativa Japonica
Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| |||||| || |||||||||||||||| |||||||||||||||| |||||
Sbjct: 67 aagtcatgcataaagtactattcatgttttatcatcttacaacaataaaaatactaatta 126
Query: 115 t 115
|
Sbjct: 127 t 127
>RF01062;MIR812;AC078948.11/88269-88440 4530:Oryza sativa (rice)
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 64 aagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatactaatta 123
Query: 115 t 115
|
Sbjct: 124 t 124
>RF01062;MIR812;AACV01001387.1/17780-17608 39947:Oryza sativa
Japonica Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| ||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 67 aagtcacgcataaattattaatcatgttttatcatctaacaataataaaaatactaatta 126
Query: 115 t 115
|
Sbjct: 127 t 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ccaatgtttgaccgtccgttttatttg 27
||||||||||||||||||| |||||||
Sbjct: 11 ccaatgtttgaccgtccgtcttatttg 37
>RF01062;MIR812;AP005158.3/66411-66583 39947:Oryza sativa Japonica
Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 66 aagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatactaatta 125
Query: 115 t 115
|
Sbjct: 126 t 126
>RF01062;MIR812;AACV01015860.1/73415-73587 39947:Oryza sativa
Japonica Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| |||||||||||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 67 aagtcacgcataaagtattaatcatattttatcatctaacaataataaaaatactaatta 126
Query: 115 t 115
|
Sbjct: 127 t 127
>RF01062;MIR812;AP003442.2/419-588 39947:Oryza sativa Japonica Group
Length = 170
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 63 aagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatactaatta 122
Query: 115 t 115
|
Sbjct: 123 t 123
>RF01062;MIR812;AP004691.2/85064-84892 39947:Oryza sativa Japonica
Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgtttt-atcatctaacaacaataaaaatacga 110
||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||| |
Sbjct: 62 gacaagtcacgcataaagtattaatcatgtttttatcatctgacaacaataaaaatacta 121
Query: 111 attat 115
|||||
Sbjct: 122 attat 126
>RF01062;MIR812;AAAA02006723.1/6073-5900 39946:Oryza sativa Indica
Group
Length = 174
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 71 attaatcatgttttatcatctaacaacaataaaaatacgaattat 115
|||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 83 attaatcatgttttatcatctaacaacaataaaaatactaattat 127
>RF01062;MIR812;AAAA02020542.1/1526-1357 39946:Oryza sativa Indica
Group
Length = 170
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaata 107
|||||||||| ||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 66 aagtcatgcataaagtattattcatgttttatcatctaacaataataaaaata 118
>RF01062;MIR812;AACV01016342.1/16728-16560 39947:Oryza sativa
Japonica Group
Length = 169
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
||||||| || ||||||||| |||||||||||||||||| |||||||||||||| |||||
Sbjct: 65 aagtcatccataaagtattattcatgttttatcatctaataacaataaaaatactaatta 124
Query: 115 t 115
|
Sbjct: 125 t 125
>RF01062;MIR812;AP008214.1/1874851-1875022 39947:Oryza sativa
Japonica Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| |||||||||||||||||||||||||||| || ||||||||||| |||||
Sbjct: 65 aagtcacgcataaagtattaatcatgttttatcatctaataataataaaaatactaatta 124
Query: 115 t 115
|
Sbjct: 125 t 125
>RF01062;MIR812;AP008207.1/20228121-20227949 39947:Oryza sativa
Japonica Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| |||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 66 aagtcacgcataaaatattaatcatgttttatcatctaacaacgataaaaatactaatta 125
Query: 115 t 115
|
Sbjct: 126 t 126
>RF01062;MIR812;AAAA02007019.1/7949-7779 39946:Oryza sativa Indica
Group
Length = 171
Score = 81.8 bits (41), Expect = 3e-15
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| | | ||| ||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 63 acaagtcacgtataaaatattaatcatgttttatcatctaacaataataaaaatataaat 122
Query: 113 tatnnnnnnntttcatataagacggatagttaaagttggaca 154
||| || |||||||||||||||||||| |||||||
Sbjct: 123 tataaaaaaaatttatataagacggatagttaaaattggaca 164
>RF01062;MIR812;AP008209.1/29308055-29308222 39947:Oryza sativa
Japonica Group
Length = 168
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 75 aaagtattaatcatattttatcatctaacaacaataaaaatactaatta 123
>RF01062;MIR812;AC073393.2/95451-95281 4530:Oryza sativa (rice)
Length = 171
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatac 108
||||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 62 gacaaatcatgcataaagtattattcatgttttatcatctaacaataataaaaatac 118
>RF01062;MIR812;AP008211.1/18545302-18545131 39947:Oryza sativa
Japonica Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| ||||||||||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 66 aagtcatgcataaagtattaatcatgttttatcatctatcaacaatggaaatactaatta 125
Query: 115 t 115
|
Sbjct: 126 t 126
>RF01062;MIR812;AC137751.2/121184-121016 39947:Oryza sativa Japonica
Group
Length = 169
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 63 aagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatactaatta 122
Query: 115 t 115
|
Sbjct: 123 t 123
