miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00920;MIR444;EU947901.1/68-234 4577:Zea mays
          Length = 167

 Score = 79.8 bits (40), Expect = 3e-15
 Identities = 56/60 (93%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttgcaagaaagtcacaaaatcaattgcagga-catacttgtggttttcttgcaagttg 59
           ||||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||
Sbjct: 71  acttgcaagaaagtcacaaaatccattgcaagatcatacttgtggctttcttgcaagttg 130




>RF00920;MIR444;EU971312.1/141-369 4577:Zea mays
          Length = 229

 Score = 44.1 bits (22), Expect = 2e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 34  catacttgtggttttcttgcaagttg 59
           ||||||||||| ||||||||||||||
Sbjct: 177 catacttgtggctttcttgcaagttg 202