miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00645;MIR169_2;AASG02000270.1/34976-34853 3988:Ricinus communis
          (castor bean)
          Length = 124

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tgagccaaggatgacttgccgcgc 24
          ||||||||||||||||||||||||
Sbjct: 11 tgagccaaggatgacttgccgcgc 34

>RF00645;MIR169_2;AARH01007603.1/200394-200284 3694:Populus
          trichocarpa
          Length = 111

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tgagccaaggatgacttgccgc 22
          ||||||||||||||||||||||
Sbjct: 11 tgagccaaggatgacttgccgc 32

>RF00645;MIR169_2;AM466421.1/3134-3032 29760:Vitis vinifera
          Length = 103

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tgagccaaggatgacttgccgc 22
          ||||||||||||||||||||||
Sbjct: 11 tgagccaaggatgacttgccgc 32