miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 135 bits (68), Expect = 1e-31
Identities = 71/72 (98%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 124 catttcccacattcatattaatgttaatgaatctagatagatatatatgtctagattcat 65
Query: 68 taacatcaatat 79
||||||||||||
Sbjct: 64 taacatcaatat 53
Score = 79.8 bits (40), Expect = 7e-15
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||| |||||||||||||| ||||||||||||||||| | |||||| | | |||||||||
Sbjct: 39 cattacccacattcatattgatgttaatgaatctagacatatatatctatctagattcat 98
Query: 68 taacatcaatat 79
|||||| |||||
Sbjct: 99 taacattaatat 110
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 133 bits (67), Expect = 5e-31
Identities = 79/83 (95%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| ||
Sbjct: 131 attctagcatttcccacattcatattgatattaatgaatctagatagatatatatgtcta 72
Query: 61 gattcattaacatcaatataaat 83
|||||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatataaat 49
Score = 79.8 bits (40), Expect = 7e-15
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
||||||||||||| ||||| ||||||||||||||||| | |||||| | | |||||||||
Sbjct: 39 catttcccacatttatattgatgttaatgaatctagacatatatatctatctagattcat 98
Query: 68 taacatcaatat 79
||| ||||||||
Sbjct: 99 taatatcaatat 110
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 127 bits (64), Expect = 3e-29
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 39 catttcccacattcatatttatgttaatgaatctagatagatatatatgtctagattcat 98
Query: 68 taacatcaatataaat 83
|| |||||||||||||
Sbjct: 99 tatcatcaatataaat 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| |||||| ||||| ||| ||||||||||||| | |||||| | | ||
Sbjct: 131 attctagcatttttcacatttatattgatgataatgaatctagacatatatatctatcta 72
Query: 61 gattcattaacatcaatat 79
||||||||||||| |||||
Sbjct: 71 gattcattaacataaatat 53
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 125 bits (63), Expect = 1e-28
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 6 attctagcatttctcacattcatattgatgttaatgaatctagatagatatatatgtcta 65
Query: 61 gattcattaacatcaatat 79
|||||||||||||||||||
Sbjct: 66 gattcattaacatcaatat 84
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| ||||||||||||||||| | |||||| | | ||
Sbjct: 105 attctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatcta 46
Query: 61 gattcattaacatcaatat 79
|||||||||||||||||||
Sbjct: 45 gattcattaacatcaatat 27
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 1e-28
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||
Sbjct: 131 attctagcatttcccacattcatattgatgttaatgaatctagataaatatatatgtata 72
Query: 61 gattcattaacatcaatat 79
|||||||||||||||||||
Sbjct: 71 gattcattaacatcaatat 53
Score = 77.8 bits (39), Expect = 3e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| ||| ||||||||| ||||||||||||||| | | |||||| | | ||
Sbjct: 32 attctagcattttccatattcatattgatgttaatgaatctatacatatatatttatcta 91
Query: 61 gattcattaacatcaatat 79
|||||||||||||||||||
Sbjct: 92 gattcattaacatcaatat 110
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 125 bits (63), Expect = 1e-28
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattaacatcaatat 79
||||||||||||||||||
Sbjct: 92 cattcattaacatcaatat 110
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcatt 68
|||||||||||||||||| |||||||||||| |||| | |||||| | | ||||||||||
Sbjct: 123 atttcccacattcatattgatgttaatgaatgtagacatatatatctatctagattcatt 64
Query: 69 aacatcaatat 79
|||||||||||
Sbjct: 63 aacatcaatat 53
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 125 bits (63), Expect = 1e-28
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||
Sbjct: 105 attctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtcta 46
Query: 61 gattcattaacatcaatat 79
|||||||||||||||||||
Sbjct: 45 gattcattaacatcaatat 27
Score = 109 bits (55), Expect = 8e-24
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| ||||||||||||||||| | |||||| | ||||
Sbjct: 6 attctagcatttcccacattcatattgatgttaatgaatctagacatatatatctattta 65
Query: 61 gattcattaacatcaatat 79
|||||||||||||||||||
Sbjct: 66 gattcattaacatcaatat 84
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 8e-27
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 39 catttcccacattcatattagtgttaatgaatctagatagatatatatgtctagattcat 98
Query: 68 taacatcaatat 79
|||||| |||||
Sbjct: 99 taacattaatat 110
Score = 79.8 bits (40), Expect = 7e-15
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||| ||||||||||||||||||||||||||||||| | |||||| | | ||
Sbjct: 131 attctagcattctccacattcatattaatgttaatgaatctagacatatatatctatcta 72
Query: 61 gattcattaaca 72
||||||||||||
Sbjct: 71 gattcattaaca 60
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 117 bits (59), Expect = 3e-26
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 32 attctagcatttcccacattcatattgttgttaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattaacatcaatat 79
||||||||| |||||||||
Sbjct: 92 gattcattaccatcaatat 110
Score = 79.8 bits (40), Expect = 7e-15
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
||||||||||||||||||| ||| ||||||||||||| | |||||| | | |||||||||
Sbjct: 124 catttcccacattcatattgatggtaatgaatctagacatatatatctatctagattcat 65
Query: 68 taacatcaatat 79
||||| ||||||
Sbjct: 64 taacaacaatat 53
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 115 bits (58), Expect = 1e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 10 tttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcatta 69
||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||
Sbjct: 40 tttcccacattcatattgatattaatgaatctagatagatatatatgtctagattcatta 99
Query: 70 acatcaatat 79
||||||||||
Sbjct: 100 acatcaatat 109
Score = 77.8 bits (39), Expect = 3e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcatt 68
|||| ||||||||||||| ||||||||||||||||| | |||||| | | ||||||||||
Sbjct: 122 attttccacattcatattgatgttaatgaatctagacatatatatctatctagattcatt 63
Query: 69 aacatcaatat 79
|| ||||||||
Sbjct: 62 aatatcaatat 52
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 32 attctaccatttctcacattcatattgatgttaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattaacatcaa 76
|||||||||| |||||
Sbjct: 92 gattcattaatatcaa 107
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| | | |||||| || || |||||||||||||| | |||||| | | ||
Sbjct: 131 attctagcattttctaaattcatgttgatattaatgaatctagacatatatatctatcta 72
Query: 61 gattcattaacatcaatat 79
|||||||||||||||||||
Sbjct: 71 gattcattaacatcaatat 53
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||||
Sbjct: 124 catttcccacatttatattgatgttaatgaatctagatagaaatatatgtctagattcat 65
Query: 68 taacatcaatataaat 83
|||||||||||||||
Sbjct: 64 aaacatcaatataaat 49
Score = 79.8 bits (40), Expect = 7e-15
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
||||||||||||| ||||| ||||| ||||||||||| | |||| | | | |||||||||
Sbjct: 39 catttcccacatttatattgatgtttatgaatctagacatatatttctatctagattcat 98
Query: 68 taacatcaatataaat 83
||||||||||||||||
Sbjct: 99 taacatcaatataaat 114
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 8e-24
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| | |||||||||||||||||||||||||| | ||
Sbjct: 32 attctagcatttcccacattcatattgacgttaatgaatctagatagatatatatttcta 91
Query: 61 gattcattaacatcaatat 79
||||||||| |||||||||
Sbjct: 92 gattcattaccatcaatat 110
Score = 69.9 bits (35), Expect = 7e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcatt 68
|||||||||||| ||||| ||| ||||||||||||| | |||||| | | ||||||||||
Sbjct: 123 atttcccacattaatattgatggtaatgaatctagaaatatatatctatctagattcatt 64
Query: 69 aacatcaatat 79
||| |||||||
Sbjct: 63 aacgtcaatat 53
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 8e-24
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| |||||| |||||| |||||||||||||||||||||||||||||| ||
Sbjct: 32 attctagcattttccacatccatattgatgttaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattaacatcaatat 79
|||||||||||| ||||||
Sbjct: 92 gattcattaacaacaatat 110
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcatt 68
|||||||||||||||||| |||||||||||||||| | |||||| | | ||||||||||
Sbjct: 123 atttcccacattcatattgttgttaatgaatctagacatatatatctatctagattcatt 64
Query: 69 aacatcaatat 79
|||||||||||
Sbjct: 63 aacatcaatat 53
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 101 bits (51), Expect = 2e-21
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| |||||||||||||||| | ||| |||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctag-cacatacatatgttta 90
Query: 61 gattcattaacatcaatat 79
|||||||||||||||||||
Sbjct: 91 gattcattaacatcaatat 109
Score = 77.8 bits (39), Expect = 3e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| ||||||||||||||| | | || ||| || ||
Sbjct: 130 attctagcatttcccacattcatattgatgttaatgaatctaaacatatgtatgtg-cta 72
Query: 61 gattcattaacatcaatat 79
|||||||||||||||||||
Sbjct: 71 gattcattaacatcaatat 53
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| | ||| ||||||||||||||||||||||||||||||||| |||||||| | ||
Sbjct: 32 attctaactttttccacattcatattaatgttaatgaatctagataaatatatatatcta 91
Query: 61 gattcattaacatcaatat 79
|||||||||| ||||||||
Sbjct: 92 gattcattaatatcaatat 110
Score = 93.7 bits (47), Expect = 5e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| || |||||||||||||||| |||||| | | ||
Sbjct: 131 attctagcatttcccacattcatattgatattaatgaatctagatatatatatttatcta 72
Query: 61 gattcattaacatcaatat 79
||||||||||||| |||||
Sbjct: 71 gattcattaacattaatat 53
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| |||||||| |||| |||||||||| ||||||||||||||||||| ||
Sbjct: 32 attctagcattttccacattcgtattgatgttaatgactctagatagatatatatgtcta 91
Query: 61 gattcattaacatcaatat 79
||||||||| |||||||||
Sbjct: 92 gattcattagcatcaatat 110
Score = 60.0 bits (30), Expect = 6e-09
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| | | ||||||||| ||| ||||||||||||| | |||||| | | ||
Sbjct: 131 attctagcattttctatattcatattgatgctaatgaatctagacatatatatctatcta 72
Query: 61 gattcattaacatcaata 78
|| |||||||||||||||
Sbjct: 71 gagtcattaacatcaata 54
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| |||||||||||| || |||||||||||| |||||||||||||| ||
Sbjct: 131 attctagcatttttcacattcatattgatattaatgaatctaaatagatatatatgtcta 72
Query: 61 gattcattaacatcaatataaat 83
|||||||||||| ||||||||||
Sbjct: 71 gattcattaacaccaatataaat 49
Score = 85.7 bits (43), Expect = 1e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||| ||||| |||||||||||||||| | |||||| | ||||
Sbjct: 32 attctagcatttcccacatttatattggtgttaatgaatctagacatatatatctattta 91
Query: 61 gattcattaacatcaatat 79
|||||||||| ||||||||
Sbjct: 92 gattcattaatatcaatat 110
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||| | ||||||||| ||||||||||||||||||||||||| |||| ||
Sbjct: 32 attctagcatttcctatattcatattgatgttaatgaatctagatagatatagatgtcta 91
Query: 61 gattcattaacatcaatat 79
||||||||||||||||||
Sbjct: 92 tattcattaacatcaatat 110
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 17 cattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatcaa 76
|||||||||| |||||||||||| |||| | ||||| | | ||||||||||||||||||
Sbjct: 115 cattcatattgatgttaatgaatatagacatctatatctatctagattcattaacatcaa 56
Query: 77 tat 79
|||
Sbjct: 55 tat 53
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||| |||||||||||| || |||||||||||||||||||||||||| ||
Sbjct: 32 attctagcatttctcacattcatattgatactaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattaacatcaatat 79
||||||||| |||||||||
Sbjct: 92 gattcattagcatcaatat 110
Score = 69.9 bits (35), Expect = 7e-12
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| ||||||||||||| ||| ||||||||||||| | |||||| | | ||
Sbjct: 131 attctaacatttaccacattcatattgatgctaatgaatctagacatatatatctatcta 72
Query: 61 gattcattaacatcaatat 79
||||||||| ||||||||
Sbjct: 71 gattcattagtatcaatat 53
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| ||||||||||||| || |||||||||||| |||||||||||||| ||
Sbjct: 131 attctaacattttccacattcatattgatattaatgaatctaaatagatatatatgtcta 72
Query: 61 gattcattaacatca 75
|||||||||||||||
Sbjct: 71 gattcattaacatca 57
Score = 93.7 bits (47), Expect = 5e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||| | ||||||||||||||||| | |||||| | ||||
Sbjct: 32 attctagcatttcccacattcatagtgatgttaatgaatctagacatatatatctattta 91
Query: 61 gattcattaacatcaatat 79
|||||||||| ||||||||
Sbjct: 92 gattcattaatatcaatat 110
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatc 74
|||||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 117 cacattcatattgattttaatgaatctagatagatatatatgtctagattcattaatatc 58
Query: 75 aatat 79
|||||
Sbjct: 57 aatat 53
Score = 85.7 bits (43), Expect = 1e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| || |||||||||||||| | |||||| | | ||
Sbjct: 32 attctaacatttcccacattcatattgatattaatgaatctagacatatatatctatcta 91
Query: 61 gattcattaacatcaatat 79
|||||||||| ||||||||
Sbjct: 92 gattcattaaaatcaatat 110
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 95.6 bits (48), Expect = 1e-19
Identities = 72/79 (91%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| |||||||||||||||| | |||||||||| ||
Sbjct: 129 attctagcatttcccacattcatattgatgttaatgaatctag--acatatatatgtcta 72
Query: 61 gattcattaacatcaatat 79
||||||||||||||||||
Sbjct: 71 cattcattaacatcaatat 53
Score = 79.8 bits (40), Expect = 7e-15
Identities = 70/79 (88%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| | ||||||||||| |||||||||||| |||| | ||||||||| ||
Sbjct: 32 attctagcattttctacattcatattgatgttaatgaatgtagaca--tatatatgtcta 89
Query: 61 gattcattaacatcaatat 79
|||||||||||||||||||
Sbjct: 90 gattcattaacatcaatat 108
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||| ||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 131 attctagcatttctcacattcatatattagttaatgaatctagatagatatatatgtcta 72
Query: 61 gattcattaacatcaatat 79
|||||||||| ||||||||
Sbjct: 71 gattcattaatatcaatat 53
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||||||||||||||||||||||| || |||||||||||||| | |||||| | | ||
Sbjct: 32 attctatcatttcccacattcatattgatattaatgaatctagacatatatatctatcta 91
Query: 61 gattcattaac 71
|||||||||||
Sbjct: 92 gattcattaac 102
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||| | || |||||||||||||| ||||||||||| ||
Sbjct: 32 attctagcatttcccacattcatacttatattaatgaatctagacggatatatatgtcta 91
Query: 61 gattcattaacatcaatat 79
||||||||| |||||||||
Sbjct: 92 gattcattagcatcaatat 110
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||||| ||||| |||||| ||| ||||||||||||| | |||||| || |||||||||
Sbjct: 124 catttctcacatccatattgatgctaatgaatctagacatatatatccgtctagattcat 65
Query: 68 taa 70
|||
Sbjct: 64 taa 62
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcatt 68
|||| ||| ||||||||| ||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 40 attttccatattcatattgatgctaatgaatttagatagatatatatgtttagattcatt 99
Query: 69 aacatcaatat 79
| |||||||||
Sbjct: 100 agcatcaatat 110
Score = 54.0 bits (27), Expect = 4e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||| || ||||||||| ||| ||||||||||| | | |||||| | | ||
Sbjct: 131 attctaacatttctcatattcatattgatgctaatgaatctaaacatatatatctatcta 72
Query: 61 gattcattaacatcaatat 79
|||||||| |||||||||
Sbjct: 71 aattcattagcatcaatat 53
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 93.7 bits (47), Expect = 5e-19
Identities = 74/82 (90%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| |||||||||||||||||||| |||||| |
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctagatag--gcatatgtcca 89
Query: 61 gattcattaacatcaatataaa 82
||||||||||||||||||||||
Sbjct: 90 gattcattaacatcaatataaa 111
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatct 41
|||||| |||||||||| || ||||| ||||||||||||||
Sbjct: 129 attctagcatttcccacgtttatattgatgttaatgaatct 89
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 93.7 bits (47), Expect = 5e-19
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||| |||||||||||| ||| ||||||||||||||||| |||||| | ||
Sbjct: 32 attctagcatttctcacattcatattgatggtaatgaatctagataga-atatatatcta 90
Query: 61 gattcattaacatcaatataaat 83
||||||||||||| |||||||||
Sbjct: 91 gattcattaacattaatataaat 113
Score = 77.8 bits (39), Expect = 3e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||| ||| ||||||||||||||||||||||||| |||| | | | ||
Sbjct: 130 attctaacatttcccatatttatattaatgttaatgaatctagatatatat-tctatcta 72
Query: 61 gattcattaacatcaatat 79
||||||||| |||||||||
Sbjct: 71 gattcattaccatcaatat 53
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 22 atattaatgttaatgaatctagatagatatatatgtttagattcattaacatcaatat 79
||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatat 110
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcatt 68
|||||||||||||||||| || |||||||||||||| | |||||| | | ||||||||||
Sbjct: 123 atttcccacattcatattgatattaatgaatctagacatatatatctatctagattcatt 64
Query: 69 aacatcaatat 79
|||||||||||
Sbjct: 63 aacatcaatat 53
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 7e-18
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatc 74
|||||| ||||| |||||||| |||||| |||||||||||||| ||||||||||||||||
Sbjct: 117 cacatttatattgatgttaataaatctatatagatatatatgtctagattcattaacatc 58
Query: 75 aatat 79
|||||
Sbjct: 57 aatat 53
Score = 87.7 bits (44), Expect = 3e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
||||||||| ||||||||| ||||||||||||||||| | |||||| | | |||||| ||
Sbjct: 39 catttcccatattcatattgatgttaatgaatctagacatatatatctatatagatttat 98
Query: 68 taacatcaatataaat 83
||||||||||||||||
Sbjct: 99 taacatcaatataaat 114
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 7e-18
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatc 74
|||||| ||||| |||||||| |||||| |||||||||||||| ||||||||||||||||
Sbjct: 44 cacatttatattgatgttaataaatctatatagatatatatgtctagattcattaacatc 103
Query: 75 aatat 79
|||||
Sbjct: 104 aatat 108
Score = 87.7 bits (44), Expect = 3e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
||||||||| ||||||||| ||||||||||||||||| | |||||| | | |||||| ||
Sbjct: 122 catttcccatattcatattgatgttaatgaatctagacatatatatctatatagatttat 63
Query: 68 taacatcaatataaat 83
||||||||||||||||
Sbjct: 62 taacatcaatataaat 47
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||||||||||||||| |||||||||||||||||| ||||| |||| ||
Sbjct: 32 attctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtcta 91
Query: 61 gattcattaaca 72
||||||||||||
Sbjct: 92 gattcattaaca 103
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| |||||||||||| |||||||||||||||| | ||||||| | ||
Sbjct: 131 attctagcattttccacattcatataggtgttaatgaatctagacatctatatatatcta 72
Query: 61 gattcattaaca 72
||||||||||||
Sbjct: 71 gattcattaaca 60
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 87.7 bits (44), Expect = 3e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagatagatatatatgtttagattcattaacatca 75
|||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 63 atgttaatgaatctagatagatatatatgtctagattcattaacatca 110
Score = 85.7 bits (43), Expect = 1e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||| | ||||||||||||||||| | |||||| | | ||
Sbjct: 135 attctagcatttcccacattcatagtgatgttaatgaatctagacatatatatctatcta 76
Query: 61 gattcattaacatca 75
|||||||||||||||
Sbjct: 75 gattcattaacatca 61
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 87.7 bits (44), Expect = 3e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||||||||||||||| |||||||||||||||||| ||||| |||| ||
Sbjct: 101 attctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtcta 42
Query: 61 gattcattaaca 72
||||||||||||
Sbjct: 41 gattcattaaca 30
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| |||||||||||| |||||||||||||||| | ||||||| | ||
Sbjct: 2 attctagcattttccacattcatataggtgttaatgaatctagacatctatatatatcta 61
Query: 61 gattcattaaca 72
||||||||||||
Sbjct: 62 gattcattaaca 73
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||| |||| |||||||| |||||||||||||||| | ||||||||||| ||
Sbjct: 32 attctagcattacccatattcatatggatgttaatgaatctagttggatatatatgtcta 91
Query: 61 gattcattaacatcaatat 79
||||||||||||| |||||
Sbjct: 92 gattcattaacattaatat 110
Score = 77.8 bits (39), Expect = 3e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||| |||||||||||||||||||||||||||||| | |||||| ||
Sbjct: 131 attctagcatttctcacattcatattaatgttaatgaatctagacatatatatccaacta 72
Query: 61 gattcattaacatcaatat 79
|||||||||||||| ||||
Sbjct: 71 gattcattaacatccatat 53
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||||||||||||||| ||||| ||||||||| ||| ||||| |||| ||
Sbjct: 131 attctagcatttcccacattcatatagatgttgatgaatctaaatatatatagatgtcta 72
Query: 61 gattcattaacatcaatat 79
|||||||||||||| ||||
Sbjct: 71 gattcattaacatctatat 53
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 5 tatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttagatt 64
||||||||| ||||||||||| ||||||||||||||||| | ||||||| ||||||||
Sbjct: 36 tatcatttctcacattcatatagatgttaatgaatctagacatctatatatatttagatt 95
Query: 65 cattaacatcaatat 79
||| |||||| ||||
Sbjct: 96 catcaacatctatat 110
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatat 51
|||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 109 attctaacatttcccacattcatattgatgttaatgaatctagatagatat 59
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 82 atcaatataaatgtgggaaatgttagaat 110
|||||||| ||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgttagaat 109
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 83.8 bits (42), Expect = 4e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| ||||||||||||||||||| |||||| || |||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 62 attcattaacatcaatat 79
||||||||||||| ||||
Sbjct: 69 attcattaacatctatat 86
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| |||||||||||||||| | |||||||| | |||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 62 attcattaacat 73
||||||||||||
Sbjct: 46 attcattaacat 35
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 3 tctatcatttcccacattcatattaatgttaatgaatctagatagatat 51
|||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 35 tctaacatttcccacattcatattgatgttaatgaatctagatagatat 83
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 atcaatataaatgtgggaaatgttaga 108
|||||||| ||||||||||||||||||
Sbjct: 61 atcaatatgaatgtgggaaatgttaga 35
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatat 53
|||||| ||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 118 attctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagat 45
|||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct: 6 attctagcatttcccacattcatattgatgttaatgtatctagat 50
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 7e-15
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
||||| ||||||||||||| || ||||| ||| ||| || |||||||||| |||||||||
Sbjct: 39 cattttccacattcatatttatattaataaatttagctaaatatatatgtctagattcat 98
Query: 68 taacatcaatat 79
||||||||||||
Sbjct: 99 taacatcaatat 110
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatat 53
|||||| ||||||||||||||||||| ||||||||||||||||| | ||||||
Sbjct: 131 attctagcatttcccacattcatattgatgttaatgaatctagacatatatat 79
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||| ||
Sbjct: 131 attctagcattttccacattcatattgatgttaatgaatctagacttatatatatgccta 72
Query: 61 gattcattaacatcaatat 79
||||||||| |||| ||||
Sbjct: 71 gattcattagcatctatat 53
Score = 69.9 bits (35), Expect = 7e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||| |||||||||||| ||| |||||||||||| | ||||||| || ||
Sbjct: 32 attctagcattgtccacattcatatagatgctaatgaatctaggcatatatataagtcta 91
Query: 61 gattcattaacatcaatat 79
|||||||||||||||||||
Sbjct: 92 gattcattaacatcaatat 110
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 37 aatctagatagatatatatgtttagattcattaacatcaatat 79
||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatat 53
Score = 58.0 bits (29), Expect = 2e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatat 53
|||||| |||||| || ||||||||| ||||||||||||||||| | ||||||
Sbjct: 32 attctagcatttctcatattcatattgatgttaatgaatctagacatatatat 84
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 13 cccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaaca 72
||||||||||||| ||||||||||||||||| | |||||| ||| ||||||||||||||
Sbjct: 44 cccacattcatatagatgttaatgaatctagacatatatatgtgtctagattcattaaca 103
Query: 73 tcaatat 79
|| ||||
Sbjct: 104 tctatat 110
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 18 attcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatcaat 77
|||||||| ||||||||||||||||| | |||||||||| |||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacacatatatatgtctagattcattaacatctat 55
Query: 78 at 79
||
Sbjct: 54 at 53
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 13 cccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaaca 72
||||||||||||| ||||||||||||||||| | |||||||||| |||||||||| |||
Sbjct: 20 cccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttaca 79
Query: 73 tcaatat 79
|| ||||
Sbjct: 80 tctatat 86
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||| |||| |||||||||||| | |||||| ||| ||||||||||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 75 aatat 79
||||
Sbjct: 33 tatat 29
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatat 51
|||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 103 attctatcatttttcacattcatattgatgttaatgaatctagatagatat 53
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagata 46
|||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 105 attctagcatttcccacattcatattaatgctaatgaatctagata 60
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatatt 26
|||||| |||||||||||||||||||
Sbjct: 32 attctagcatttcccacattcatatt 57
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| |||| |||||||||||| | |||||| |||||||
Sbjct: 33 ttctaacattgcccacattcatatatatgtcaatgaatctagacatatatatgtgtttag 92
Query: 62 attcattaacatcaatat 79
||||||| ||||| ||||
Sbjct: 93 attcattgacatctatat 110
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcatt 68
||||| |||||| ||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 117 cacatccatattgatgctaatgaatctagatagatatatatgtctagattcatt 64
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| |||||||||||| ||| |||||||||||| | |||||| | | ||
Sbjct: 32 attctagcattttccacattcatatcgatgccaatgaatctagacatatatatctatcta 91
Query: 61 gattcattaacatcaatat 79
||||||||| |||||||||
Sbjct: 92 gattcattagcatcaatat 110
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagata 46
|||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattaatgctaatgaatctagata 77
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatatt 26
|||||| |||||||||||||||||||
Sbjct: 105 attctagcatttcccacattcatatt 80
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagata 46
|||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 108 attctaacatttcccacattcatattgatgttaatgaatctagata 63
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 82 atcaatataaatgtgggaaatgttagaat 110
|||||||| ||||||||||||||||||||
Sbjct: 80 atcaatatgaatgtgggaaatgttagaat 108
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| ||||||||||||||||| | |||| | ||| |||
Sbjct: 130 ttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtgtgtctag 71
Query: 62 attcattaacatcaatat 79
||||||||||||| ||||
Sbjct: 70 attcattaacatctatat 53
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||| ||||||||||||||||| | | |||||| | ||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacacacatatatttctagattcattaacatc 105
Query: 75 aatat 79
||||
Sbjct: 106 tatat 110
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| ||||||||||||||||| | |||| | ||| |||
Sbjct: 33 ttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtgtgtctag 92
Query: 62 attcattaacatcaatat 79
||||||||||||| ||||
Sbjct: 93 attcattaacatctatat 110
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||| ||||||||||||||||| | | |||||| | ||||||||||||||||
Sbjct: 117 cacattcatatagatgttaatgaatctagacacacatatatttctagattcattaacatc 58
Query: 75 aatat 79
||||
Sbjct: 57 tatat 53
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/52 (94%), Gaps = 2/52 (3%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagatagatatatatgtttagattcattaacatcaatat 79
|||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 52 atgttaatgaatctagatag--atatatgtctagattcattaacatcaatat 101
Score = 69.9 bits (35), Expect = 7e-12
Identities = 62/70 (88%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
||||||||| ||||||||| |||||||||||||||| | |||||| | | |||||||||
Sbjct: 115 catttcccatattcatattgatgttaatgaatctag--acatatatctatctagattcat 58
Query: 68 taacatcaat 77
||||||||||
Sbjct: 57 taacatcaat 48
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatat 53
|||||| ||||||||||||| ||||||||||||||||||||||| | ||||||
Sbjct: 32 attctagcatttcccacatttatattaatgttaatgaatctagacatatatat 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 69/83 (83%), Gaps = 10/83 (12%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| |||||||||| |||||||||| ||
Sbjct: 121 attctagcatttcccacattcatattgatgttaatga----------atatatatgtcta 72
Query: 61 gattcattaacatcaatataaat 83
||||||||||||| |||||||||
Sbjct: 71 gattcattaacattaatataaat 49
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 85 aatataaatgtgggaaatgttagaat 110
||||||||||||||||||| ||||||
Sbjct: 57 aatataaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||| ||||||||||||||||||| || | ||||| ||||||||||||||||
Sbjct: 117 cacattcatatggatgttaatgaatctagatatatgtctatgtctagattcattaacatc 58
Query: 75 aatat 79
||||
Sbjct: 57 tatat 53
Score = 54.0 bits (27), Expect = 4e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||| || | |||||||| ||||||||||||||||| | | | |||| | ||
Sbjct: 32 attctagcattgcctatattcatatagatgttaatgaatctagacatagacatatatcta 91
Query: 61 gattcattaacatcaatat 79
|||||||||||||| ||||
Sbjct: 92 gattcattaacatccatat 110
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||| | ||||||||||||||| | | |||||||||| |||
Sbjct: 33 ttctagcattacccacattcatttagatgttaatgaatctaaacacatatatatgtctag 92
Query: 62 attcattaacatc 74
|||||||||||||
Sbjct: 93 attcattaacatc 105
Score = 69.9 bits (35), Expect = 7e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||||||||| | |||||| ||||||||||||||||||||
Sbjct: 104 atgttaatgaatctagacatatatatgtgtttagattcattaacatc 58
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctaga 75
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 51 tatatgtttagattcattaacatcaatat 79
||||||| |||||||||||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatat 53
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctaga 75
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 122 attctagcatttcccacattcatattgatgttaatgaatctaga 79
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctaga 75
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 49 tatatatgtttagattcattaacatcaatat 79
||||||||| |||||||||||||||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatat 53
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 13 cccacattcatattaatgttaatgaatctagatagatatatatgtttagattcatt 68
||||||||||||| ||||||||||||||||| | | |||||||||||||||||||
Sbjct: 44 cccacattcatatatatgttaatgaatctagacacacatatatgtttagattcatt 99
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||| ||||||||||||| || | |||||||||| | | |||| | ||| |||||||||
Sbjct: 124 cattgcccacattcatatagatatcaatgaatctaaacatatatgtgtgtctagattcat 65
Query: 68 taacat 73
||||||
Sbjct: 64 taacat 59
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 16 acattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatca 75
|||||||||| ||||||||||||||||| | |||| | ||||||||||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatctagacatatatgtgtgtttagattcattaacatct 106
Query: 76 atat 79
||||
Sbjct: 107 atat 110
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 14 ccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacat 73
|||||||||||| ||||||||||||||| | | | |||||||| |||||||||||||||
Sbjct: 118 ccacattcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacat 59
Query: 74 caatat 79
| ||||
Sbjct: 58 ctatat 53
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||| |||||||||| || ||||||||||||||||||| |||| | ||| |||||||||
Sbjct: 124 cattgcccacattcacatagatgttaatgaatctagatatatatgtgtgtctagattcat 65
Query: 68 taacatcaatat 79
||||||| ||||
Sbjct: 64 taacatctatat 53
Score = 63.9 bits (32), Expect = 4e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||| ||||||||||||||||| | | |||||| | ||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacacacatatatatctagattcattaacatc 105
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 32 attctatcatttcccacattcatattgatgtcaatgaatctaga 75
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagat 49
|||||| ||||||||||||||||||| |||| |||||||||||| ||||
Sbjct: 125 attctagcatttcccacattcatattgatgtcaatgaatctagacagat 77
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 71.9 bits (36), Expect = 2e-12
Identities = 68/79 (86%), Gaps = 6/79 (7%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||||||||||||||| ||| |||||||||||| |||||||| ||
Sbjct: 32 attctagcatttcccacattcatattgatgctaatgaatctag------atatatgtcta 85
Query: 61 gattcattaacatcaatat 79
||||||||| |||||||||
Sbjct: 86 gattcattagcatcaatat 104
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||| ||||||||||| ||| |||||||||||||
Sbjct: 125 attctagcatttcctacattcatattgatgctaatgaatctaga 82
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 13 cccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaaca 72
|||| |||||||| ||||||||||| ||||||| ||| |||||| ||||||||||||||
Sbjct: 44 cccatattcatatagatgttaatgaacctagatatatacatatgtctagattcattaaca 103
Query: 73 tcaatat 79
|| ||||
Sbjct: 104 tctatat 110
Score = 60.0 bits (30), Expect = 6e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 14 ccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacat 73
|||||||||||| ||||||||||||||||| | || ||||| | ||| |||||||||||
Sbjct: 118 ccacattcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacat 59
Query: 74 caatat 79
| ||||
Sbjct: 58 ctatat 53
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 13 cccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaaca 72
|||| |||||||| ||||||||||| ||||||| ||| |||||| ||||||||||||||
Sbjct: 119 cccatattcatatagatgttaatgaacctagatatatacatatgtctagattcattaaca 60
Query: 73 tcaatat 79
|| ||||
Sbjct: 59 tctatat 53
Score = 60.0 bits (30), Expect = 6e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 14 ccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacat 73
|||||||||||| ||||||||||||||||| | || ||||| | ||| |||||||||||
Sbjct: 45 ccacattcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacat 104
Query: 74 caatat 79
| ||||
Sbjct: 105 ctatat 110
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 69.9 bits (35), Expect = 7e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatg 56
||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 106 ttctagcattttccatattcatattaatgttaatgaatctagatgaatatatatg 52
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 69.9 bits (35), Expect = 7e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatag 47
|||||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 100 attctagcatttctcacattcatattgatgttaatgaatctagatag 54
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagata 46
|||||| ||||||| ||||||||||| |||||||||||||||||||
Sbjct: 96 attctagcatttcctacattcatattgatgttaatgaatctagata 51
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| |||||||||| | |||||||||||||||||| |||||||||| ||
Sbjct: 129 attctagcatttttcacattcatactcatgttaatgaatctagat--atatatatgtcta 72
Query: 61 gattcattaacat 73
||||||||||||
Sbjct: 71 aattcattaacat 59
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
||||||||||||||||| | |||||||||||| ||| | |||||||| | |||||||||
Sbjct: 39 catttcccacattcatactcatgttaatgaatttag--acatatatatatctagattcat 96
Query: 68 taacat 73
||||||
Sbjct: 97 taacat 102
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| ||| ||||||||||||| | |||||| ||| |||
Sbjct: 130 ttctagcattgcccacattcatatagatgctaatgaatctagacatatatatgtgtatag 71
Query: 62 attcattaacatcaatat 79
|||||||||||| ||||
Sbjct: 70 gttcattaacatctatat 53
Score = 60.0 bits (30), Expect = 6e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| |||||| |||||| ||||||||||| ||| | | |||||||||| |||
Sbjct: 33 ttctagcattgcccacaatcatatagatgttaatgaacctatacacatatatatgtctag 92
Query: 62 attcattaacatcaatat 79
|||||||| |||| ||||
Sbjct: 93 attcattagcatctatat 110
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagat 45
||||||||||||||||||| ||||||||||||||||||
Sbjct: 39 catttcccacattcatattgatgttaatgaatctagat 76
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagat 45
|||||| ||||| | | ||||||||| ||||||||||||||||||
Sbjct: 119 attctagcatttactatattcatattgatgttaatgaatctagat 75
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||| |||||||||||| |||| |||||||||||| | |||| ||||| ||
Sbjct: 131 attctagcatttctcacattcatattgatgtcaatgaatctagacatatatgtatgtcta 72
Query: 61 gattca 66
||||||
Sbjct: 71 gattca 66
Score = 50.1 bits (25), Expect = 6e-06
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||| || |||||||||||| | | |||||||||| | | |||||||| ||
Sbjct: 32 attctagcatntctcacattcatattgaaatcgntgaatctagacatacatatatgtcta 91
Query: 61 gattcattaacatcaatat 79
|||||||| ||||||||||
Sbjct: 92 gattcattgacatcaatat 110
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
|||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 32 attctaacatttcccacattcatattgatgttaatgaatcta 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 52 atatgtttagattcattaacatcaatat 79
||||||||||||||||||||||||||||
Sbjct: 80 atatgtttagattcattaacatcaatat 53
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 82 atcaatataaatgtgggaaatgttagaat 110
|||||||| ||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgttagaat 32
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagat 45
||||||||||||||||||| ||||||||||||||||||
Sbjct: 112 catttcccacattcatattgatgttaatgaatctagat 75
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagat 45
|||||| ||||| | | ||||||||| ||||||||||||||||||
Sbjct: 32 attctagcatttactatattcatattgatgttaatgaatctagat 76
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 67.9 bits (34), Expect = 3e-11
Identities = 63/72 (87%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||||||||| |||||||| || |||||||||||||||||||||| | |||||||||
Sbjct: 5 catttcccacgttcatattgatattaatgaatctagatagatata---atctagattcat 61
Query: 68 taacatcaatat 79
||| ||||||||
Sbjct: 62 taatatcaatat 73
Score = 60.0 bits (30), Expect = 6e-09
Identities = 62/72 (86%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||||||||| |||||||| || ||||||||||||||| ||||| | | |||||||||
Sbjct: 87 catttcccacgttcatattgatattaatgaatctagat---tatatctatctagattcat 31
Query: 68 taacatcaatat 79
||| ||||||||
Sbjct: 30 taatatcaatat 19
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagata 46
|||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 88 attctagcatttcccacattcatattgatattaatgaatctagata 43
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
|||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 103 attctagcatttcccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
|||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 113 attctagcatttcccacattcatattgatgttaatgaatcta 72
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaat 35
|||||| ||||||||||||||||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattaatgttaat 66
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 atatgtttagattcattaacatcaatat 79
|||||| |||||||||||||||||||||
Sbjct: 65 atatgtatagattcattaacatcaatat 92
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||| ||||| |||||||||||||||| | | ||| |||||| |||
Sbjct: 33 ttctagcattgcccacatacatataaatgttaatgaatctaaacacatacatatgtctag 92
Query: 62 attcattaacatc 74
|||||||| ||||
Sbjct: 93 attcattagcatc 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| |||| |||||| | ||| ||||||||||||| | || ||| |||||||
Sbjct: 130 ttctagcattgcccaaattcatttagatgctaatgaatctagacatatgtatgtgtttag 71
Query: 62 attcattaacat 73
||||||||||||
Sbjct: 70 attcattaacat 59
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagat 45
|||||| |||||| |||||||||||| ||||||||||||||||||
Sbjct: 32 attctagcatttctcacattcatattgatgttaatgaatctagat 76
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 4 ctatcatttcccacattcatattaatgttaatgaatctaga 44
||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 1 ctatcatttcccacattcatattgatgtcaatgaatctaga 41
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagat 49
||||||||||||||||||| |||| |||||||||||| ||||
Sbjct: 84 catttcccacattcatattgatgtcaatgaatctagacagat 43
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 3 tctatcatttcccacattcatattaatgttaatgaatctagatagatat 51
|||| ||||| ||||||||||||| ||||||||||||||||||| ||||
Sbjct: 101 tctaacattttccacattcatattgatgttaatgaatctagatatatat 53
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 atatatgtttagattcattaacatcaatat 79
|||||| | |||||||||||||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatat 82
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagat 45
|||||| |||||| |||||||||||| ||||||||||||||||||
Sbjct: 32 attctagcatttctcacattcatattgatgttaatgaatctagat 76
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||| ||||||||||||||||||| || | ||| | ||||||||||||||||
Sbjct: 46 cacattcatatggatgttaatgaatctagatatatgtctatatctagattcattaacatc 105
Query: 75 aatat 79
||||
Sbjct: 106 tatat 110
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||| || | |||||||| ||||||||||||||||||| | | |||| | ||
Sbjct: 131 attctagcattgcctatattcatatagatgttaatgaatctagatatagacatatatcta 72
Query: 61 gattcattaacatcaatat 79
|||||||||||||| ||||
Sbjct: 71 gattcattaacatccatat 53
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 65.9 bits (33), Expect = 1e-10
Identities = 58/66 (87%), Gaps = 4/66 (6%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||| ||||||||||||| ||||||||||||||| ||||||||||| |||||||||
Sbjct: 86 cattgcccacattcatatatatgttaatgaatcta----gatatatatgtctagattcat 31
Query: 68 taacat 73
||||||
Sbjct: 30 taacat 25
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatat 53
|||| ||||||||||||| ||||||||||||||||| | ||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctagacatatatat 50
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagat 45
|||||| ||||||||| ||||||||| ||||||||||||||||||
Sbjct: 32 attctagcatttcccatattcatattgatgttaatgaatctagat 76
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagat 45
|||||| ||||||||| ||||||||| ||||||||||||||||||
Sbjct: 113 attctagcatttcccatattcatattgatgttaatgaatctagat 69
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||| ||| | |||||||| |||||||| | ||| ||||||||||
Sbjct: 130 ttctagcattgcccacatacatttagatgttaataaatctagacatatacatatgtttag 71
Query: 62 attcattaacatc 74
|||||||||||||
Sbjct: 70 attcattaacatc 58
Score = 46.1 bits (23), Expect = 9e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||||||| | | || ||||||| |||||| |||||||||
Sbjct: 59 atgttaatgaatctaaacatatgtatatgtctagatttattaacatc 105
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||||| ||||||||| |||||||||||||||||
Sbjct: 112 attctagcatttcccatattcatattgatgttaatgaatctaga 69
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||||||||||||||| ||||||||| |||||||
Sbjct: 102 attctagcatttcccacattcatattgatgttaatggatctaga 59
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/49 (89%), Gaps = 2/49 (4%)
Strand = Plus / Plus
Query: 31 ttaatgaatctagatagatatatatgtttagattcattaacatcaatat 79
|||||| |||||||||||||||| || ||||| |||||||||||||||
Sbjct: 35 ttaatggatctagatagatatat--gtctagatccattaacatcaatat 81
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatc 40
|||||| ||||||||||||||||||| |||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatc 71
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatc 40
|||||| |||||| |||||||||||| |||||||||||||
Sbjct: 114 attctagcatttctcacattcatattgatgttaatgaatc 75
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 119 attctagcatttcccacattcatattgatgttaatgaaactaga 76
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
|||||| ||||| ||||||||||||| |||||||||||||||
Sbjct: 32 attctagcattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||| | ||||||||||||||| | | || ||| |||||||
Sbjct: 33 ttctagcattacccacattcatttagatgttaatgaatctaaacatatgtatgtgtttag 92
Query: 62 attcattaacat 73
||||||||||||
Sbjct: 93 attcattaacat 104
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||||||| | | ||| |||||||||||||||||||||||
Sbjct: 104 atgttaatgaatctaaacacatacatatgtttagattcattaacatc 58
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||||||||||||||| |||| ||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgtcaatgaatctaga 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgtt 32
|||||| ||||||||||||||||||| |||||
Sbjct: 108 attctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagatagatatatatgtttagattcattaacatcaatat 79
||||||||||||||||||| | | |||||||||||||||||| |||| ||||
Sbjct: 59 atgttaatgaatctagatatagacatatgtttagattcattaccatctatat 110
Score = 48.1 bits (24), Expect = 2e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||| ||||||||||||| ||| ||||||||||| | | || | ||| | |||||||||
Sbjct: 124 cattgcccacattcatatagatggtaatgaatctaaacatatgtctatatctagattcat 65
Query: 68 taacatcaatat 79
||||||| ||||
Sbjct: 64 taacatctatat 53
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattaatgttaatgaatctagatagatata 52
|||||||||||||||||| || |||||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatactaatgaatctagatagatata 83
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||||| ||||||||| |||||||||||||||||
Sbjct: 32 attctagcatttcccatattcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| |||||||||||||||| | | ||| |||| |||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47
Query: 62 attcattaacat 73
||||||||||||
Sbjct: 46 attcattaacat 35
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 14 ccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacat 73
|||||||||||| ||||||||||||||||| | ||| | || |||||||||||||||
Sbjct: 21 ccacattcatatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacat 80
Query: 74 caatat 79
| ||||
Sbjct: 81 ctatat 86
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| |||||||||||||||| | |||| |||| |||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctag 47
Query: 62 attcattaacat 73
||||||||||||
Sbjct: 46 attcattaacat 35
Score = 60.0 bits (30), Expect = 6e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| |||| |||||||| |||||||||||||||| | | ||||||| |||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 62 attcattaacatcaatat 79
||||||||||||| ||||
Sbjct: 69 attcattaacatctatat 86
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| |||||||||||||| | | |||||||||| |||
Sbjct: 130 ttctagcattgcccacattcatatatatgttaatgaatcttggcacatatatatgtctag 71
Query: 62 attcattaacat 73
||| ||||||||
Sbjct: 70 atttattaacat 59
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||| ||||||||||||| |||||||| |||||||| | |||||| || ||||||||
Sbjct: 39 cattgcccacattcatatatatgttaataaatctagacatatatatgtgccaagattcat 98
Query: 68 taacat 73
||||||
Sbjct: 99 taacat 104
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 32 attctagcattttccacattcatattgatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 89 taaatgtgggaaatgttagaat 110
||||||||||||||||||||||
Sbjct: 86 taaatgtgggaaatgttagaat 107
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||||||||||||||| || ||||||||||||||
Sbjct: 108 attctagcatttcccacattcatatttatattaatgaatctaga 65
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatatta 27
|||||| ||||||||||||||||||||
Sbjct: 32 attctagcatttcccacattcatatta 58
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 112 attctaacattttccacattcatattgatgttaatgaatctaga 69
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 tatatgtttagattcattaacatcaatat 79
||||||| |||||||||||||||||||||
Sbjct: 63 tatatgtctagattcattaacatcaatat 91
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaat 35
|||||| ||||||||||||||||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattaatgttaat 66
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
|||||| ||||| ||||||||||||| |||||||||||||||
Sbjct: 113 attctagcattttccacattcatattgatgttaatgaatcta 72
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 atatgtttagattcattaacatcaatat 79
|||||| |||||||||||||||||||||
Sbjct: 65 atatgtatagattcattaacatcaatat 92
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| |||||||||||| |||||||||| | |||||||||| |||||| ||
Sbjct: 32 attctagcattttccacattcatatcgatgttaatgagtttagatagatacatatgtcta 91
Query: 61 gat 63
|||
Sbjct: 92 gat 94
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||| ||||||| ||||| |||||||||||| |||||| | || | ||| ||
Sbjct: 32 attctagcattgcccacatacatatagatgttaatgaatttagatatagatgtgtgtcta 91
Query: 61 gattcattaacatcaatat 79
|||||||||||||| ||||
Sbjct: 92 gattcattaacatctatat 110
Score = 54.0 bits (27), Expect = 4e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||| |||| |||||||| ||||||||||||||||| | | || ||| | ||
Sbjct: 131 attctagcattacccatattcatatagatgttaatgaatctagacacacatctatatcta 72
Query: 61 gattcattaacatcaatat 79
||||||||||||| ||||
Sbjct: 71 aattcattaacatctatat 53
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||||| | |||||||| | |||| |||||||| |||||||||||||| ||
Sbjct: 32 attctagcatttcctatattcatatagaggttagtgaatctatatagatatatatgtcta 91
Query: 61 gattcattaac 71
|||||| ||||
Sbjct: 92 gattcactaac 102
Score = 54.0 bits (27), Expect = 4e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||||||||||||||||| | |||| |||||||||| | |||||| | | ||
Sbjct: 131 attctagcatttcccacattcatatggaggttagtgaatctagacatatatatctatata 72
Query: 61 gattcattaac 71
|||||| ||||
Sbjct: 71 gattcactaac 61
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| | ||| ||||||||||||| |||||||||| | |||||||||| |||||| ||
Sbjct: 125 attctagccttttccacattcatattgatgttaatgagtttagatagatacatatgtcta 66
Query: 61 gat 63
|||
Sbjct: 65 gat 63
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||||||| ||| ||| |||||| ||||||||||||||||
Sbjct: 104 atgttaatgaatctaaatacatacatatgtctagattcattaacatc 58
Score = 60.0 bits (30), Expect = 6e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| |||| |||||| | ||||||||||||||||| | || ||| | |||||
Sbjct: 33 ttctagcattgcccatattcatttagatgttaatgaatctagacatatgtatgtatttag 92
Query: 62 attcattaacatcaatat 79
||||||||||||| ||||
Sbjct: 93 attcattaacatccatat 110
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagata 46
||||||||||||||||||| ||||||||||||| |||||
Sbjct: 100 catttcccacattcatattgatgttaatgaatcaagata 62
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatat 55
|||||||||| ||||||||||||| ||| ||||||||||||| | ||||||||
Sbjct: 110 ttctatcattgcccacattcatatagatgctaatgaatctagacatatatatat 57
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
|||||| ||||| ||||||||||||| |||||||||||||||
Sbjct: 32 attctagcattttccacattcatattgatgttaatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaa 38
|||||| |||||| |||||||||||| |||||||||||
Sbjct: 122 attctagcatttctcacattcatattgatgttaatgaa 85
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 6e-09
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| |||||||||||||||| | | | |||||| |||
Sbjct: 33 ttctagcattgcccacattcatatagatgttaatgaatctag--acacacatatgtctag 90
Query: 62 attcattaacatc 74
|||||||||||||
Sbjct: 91 attcattaacatc 103
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 6e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| ||| |||||||||||| | | |||||||| |||
Sbjct: 130 ttctagcattgcccacattcatatatatgctaatgaatctaggcacacatatatgtctag 71
Query: 62 attcattaacatcaatataaat 83
|||||||| ||| ||||||||
Sbjct: 70 attcattagtatctatataaat 49
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagata 46
|||||| ||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 32 attctagcattttccacattcatattgatgttaatgtatctagata 77
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
|||||| ||||||||||||||||||| ||||||||| |||||
Sbjct: 119 attctagcatttcccacattcatattgatgttaatgtatcta 78
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
|||||| |||||||||||||||||| |||||||||||||||
Sbjct: 32 attctagcatttcccacattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 6e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||| | |||||||||||||||| | | ||||| |||||
Sbjct: 33 ttctagcattacccacattcatttagttgttaatgaatctagacatgtgtatatatttag 92
Query: 62 attcattaacatcaatat 79
||||||||||||| ||||
Sbjct: 93 attcattaacatctatat 110
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagatagatatatatgtttagattcattaaca 72
||||||||||||||| ||| ||| | |||| ||||||||||||||
Sbjct: 104 atgttaatgaatctaaatatatacacatgtctagattcattaaca 60
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
|||||| ||| ||||||||||||||| |||||||||||||||
Sbjct: 105 attctagcatatcccacattcatattgatgttaatgaatcta 64
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 atgtttagattcattaacatcaatat 79
||||||||||||||||||||||||||
Sbjct: 59 atgtttagattcattaacatcaatat 84
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcatt 68
||||| ||||| ||| ||||||||||||||| |||||||||| ||||||||||
Sbjct: 117 cacatccatatcgatgctaatgaatctagataaatatatatgtctagattcatt 64
Score = 54.0 bits (27), Expect = 4e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| |||||||||||| ||| |||||||||||| | |||||| | | ||
Sbjct: 32 attctagcattttccacattcatatcgatgccaatgaatctagacatatatatttatcta 91
Query: 61 gattcattaacatcaatat 79
||||||||| |||| ||||
Sbjct: 92 gattcattagcatcgatat 110
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaa 38
||||||| |||||||||||||||||| |||||||||||
Sbjct: 32 attctattatttcccacattcatattgatgttaatgaa 69
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattaatgttaatgaa 38
|||||||||||| ||||| |||||||||||
Sbjct: 116 atttcccacatttatattgatgttaatgaa 87
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaa 38
|||||| ||||||||||||||||||| |||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaa 69
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagata 46
|||||| |||||| |||||||||||| || ||||||||||||||||
Sbjct: 32 attctagcatttctcacattcatattgatattaatgaatctagata 77
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagata 46
||||| |||| ||||||||||||| |||||||||||||||||||
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctagata 49
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctaga 44
||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 108 ttctaacattgcccacattcatatggatgttaatgaatctaga 66
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatct 41
|||||| ||||||||||||||||||| ||| ||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatggtaatgaatct 72
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaat 35
|||||| ||||||||||||||||||| ||||||||
Sbjct: 110 attctagcatttcccacattcatattgatgttaat 76
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa
Indica Group
Length = 134
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 21 catattaatgttaatgaatctagatagatatatatgt 57
|||||| ||||||||||||||||||||||||| ||||
Sbjct: 83 catattgatgttaatgaatctagatagatataaatgt 47
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 58.0 bits (29), Expect = 2e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
|||||||||||||||| | ||||||||||||| || | ||||||||| |||||||||
Sbjct: 39 catttcccacattcatgtagatgttaatgaatcaag--acatatatatgcatagattcat 96
Query: 68 taacatcaatat 79
||||||| ||||
Sbjct: 97 taacatctatat 108
Score = 50.1 bits (25), Expect = 6e-06
Identities = 52/60 (86%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 15 cacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||| |||||||||||||| || |||||||||| | ||||||||||||||
Sbjct: 115 cacattcatatagatgttaatgaatct--atgcatatatatgtcttgattcattaacatc 58
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattaatgttaatgaatctagatagatatat 53
|||||||||||||||| | |||||||| |||||||||| ||||||
Sbjct: 109 atttcccacattcatagtgatgttaataaatctagatatatatat 65
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||| ||||||||| ||||||||||||||| ||| ||||| ||| |||
Sbjct: 130 ttctagcattgcccgcattcatatagatgttaatgaatctatatacttatatgtgtctag 71
Query: 62 attcattaacatc 74
|||||||| ||||
Sbjct: 70 attcattagcatc 58
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| |||||||||| || ||| ||||||||||||| | ||||| | | |||
Sbjct: 33 ttctagcattgcccacattcacatagatgctaatgaatctagacacatataagtatatag 92
Query: 62 attcattaacatcaatat 79
||||||||||||| ||||
Sbjct: 93 attcattaacatctatat 110
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 58.0 bits (29), Expect = 2e-08
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagata--tatatgttt 59
||||| |||| ||||||||||||| ||||||||||||||| ||| ||| | | ||| |
Sbjct: 33 ttctagcattgcccacattcatatagatgttaatgaatctatatatatatgtgtgtgtat 92
Query: 60 agattcattaacatcaatat 79
||||||||||||||| ||||
Sbjct: 93 agattcattaacatctatat 112
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatcta 42
||||| |||| ||||||||||||| |||||||||||||||
Sbjct: 132 ttctagcattgcccacattcatatagatgttaatgaatcta 92
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattaatgttaatgaatctagatagatatatatgt 57
||||| || ||| ||||| ||| ||||||||||||||||||||||||||
Sbjct: 40 atttctcatatttatattgatgataatgaatctagatagatatatatgt 88
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagata 46
||||| |||| ||||||||||||| |||||||||||||||||||
Sbjct: 131 ttctagcattgcccacattcatatagatgttaatgaatctagata 87
Score = 46.1 bits (23), Expect = 9e-05
Identities = 66/79 (83%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgtt-aatgaatctagatagatatatatgttta 60
||||| |||| ||||||||||||| ||||| ||| |||||||| | || |||| | ||
Sbjct: 33 ttctagcattacccacattcatatagatgttaaattaatctagacacctacatatatcta 92
Query: 61 gattcattaacatcaatat 79
|||||||||||||| ||||
Sbjct: 93 gattcattaacatctatat 111
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| |||||| |||||||||||| |||| ||||||||||||
Sbjct: 111 attctagcatttctcacattcatatttatgtcaatgaatctaga 68
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||| ||| ||||||||| |||||||||||||||||
Sbjct: 118 attctagcattttccatattcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctag 43
||||||||||||||||||| ||| ||||||||||||
Sbjct: 39 catttcccacattcatattgatgctaatgaatctag 74
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| |||||| |||||||||||| ||| |||||||||||||
Sbjct: 98 attctagcatttctcacattcatattgatgctaatgaatctaga 55
Score = 46.1 bits (23), Expect = 9e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaat 39
|||||| |||||| |||||||||||| ||| ||||||||
Sbjct: 11 attctagcatttctcacattcatattgatgctaatgaat 49
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 atatatgtttagattcattaacatcaatat 79
|||||||| ||||||||||| |||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatat 77
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatata 52
|||||| ||||| ||||| | ||||| ||||||||||||||| |||||||||
Sbjct: 32 attctagcattttccacaattatattgatgttaatgaatctatatagatata 83
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 59 tagattcattaacatcaatataa 81
|||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatataa 51
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatc 40
|||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgctaatgaatc 71
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatc 40
|||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 111 attctagcatttcccacattcatattgatgctaatgaatc 72
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||| || |||||||||| ||||||||||||||||| | | || ||| | ||
Sbjct: 32 attctagcattaccaacattcatatagatgttaatgaatctagacacacatctatatcta 91
Query: 61 gattcattaacatcaatata 80
||||||||||||| |||||
Sbjct: 92 aattcattaacatctatata 111
Score = 54.0 bits (27), Expect = 4e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| |||| ||||||| |||| |||||||||||| |||||| | || | ||| ||
Sbjct: 131 attctagcattgcccacatatatatagatgttaatgaatttagatatagatgtgtgtcta 72
Query: 61 gattcattaacatcaatat 79
|||||||||||||| ||||
Sbjct: 71 gattcattaacatctatat 53
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagatagatatatatgtttagattcattaac 71
||||||||||||||||| | || ||| |||||||||||||||||
Sbjct: 104 atgttaatgaatctagacatatgtatgtgtttagattcattaac 61
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 30 gttaatgaatctagatagatatatatgtttagattcattaacatc 74
||||||||||||| | | ||| |||||| ||||||||||||||||
Sbjct: 61 gttaatgaatctaaacacatacatatgtctagattcattaacatc 105
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 117 attctagcatttcccacattcatattgatgttcataaatctaga 74
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaat 39
|||||| ||||||||||||||||||| ||||| ||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttcatgaat 70
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctag 43
||||||||||||||||||| ||| ||||||||||||
Sbjct: 109 catttcccacattcatattgatgctaatgaatctag 74
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatc 40
|||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 6 attctagcatttcccacattcatattgatgctaatgaatc 45
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatc 40
|||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 85 attctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| |||||||||||||||||||| | |||||||||||||
Sbjct: 103 attctagcatttcccacattcatattagtactaatgaatctaga 60
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattaatgttaatgaatctaga 44
||||| |||||||||||| |||||||||||||||||
Sbjct: 40 atttctcacattcatattgatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 50 atatatgtttagattcattaacatcaatat 79
|||| ||| |||||||||||||||||||||
Sbjct: 82 atatttgtctagattcattaacatcaatat 53
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatat 53
||||| |||| ||||||||||||| ||||||||||||||||| | ||||||
Sbjct: 104 ttctagcattacccacattcatatatatgttaatgaatctagacatatatat 53
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 48 atatatatgtttagattcattaacat 73
|||||||||| |||||||||||||||
Sbjct: 53 atatatatgtctagattcattaacat 78
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattaatgttaatgaatctaga 44
||||| |||||||||||| |||||||||||||||||
Sbjct: 112 atttctcacattcatattgatgttaatgaatctaga 77
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatag 47
|||||| ||||| ||| ||||||||| |||||||||||| |||||||
Sbjct: 32 attctaacattttccatattcatattgatgttaatgaatgtagatag 78
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctaga 44
||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 33 ttctagcattgcccacattcatatagatgttaatgaatctaga 75
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatag 47
|||||| ||||| ||||||||||| | ||| ||||||||||||||||
Sbjct: 32 attctagcattttccacattcatactgatgctaatgaatctagatag 78
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
||||| |||| ||||||||||||| ||| |||||||||||| | | |||||||| |||
Sbjct: 12 ttctagcattgcccacattcatatctatgctaatgaatctaggcacacatatatgtctag 71
Query: 62 attcatt 68
|||||||
Sbjct: 72 attcatt 78
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 14 ccacattcatattaatgttaatgaatctaga 44
|||||||||||| ||||||||||||||||||
Sbjct: 116 ccacattcatataaatgttaatgaatctaga 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 attcatattaatgttaatgaatctag 43
||||||||| ||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 13 cccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaaca 72
|||| |||||||| |||||||||||| |||| | |||||||| ||||||||||||||
Sbjct: 44 cccatattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaaca 103
Query: 73 tcaatat 79
|| ||||
Sbjct: 104 tctatat 110
Score = 46.1 bits (23), Expect = 9e-05
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 13 cccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaaca 72
|||| |||||||| ||||||||||||||||| | |||| ||| || |||||||||||
Sbjct: 119 cccatattcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaaca 60
Query: 73 tcaatat 79
|| ||||
Sbjct: 59 tctatat 53
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 13 cccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaaca 72
|||| |||||||| |||||||||||| |||| | |||||||| ||||||||||||||
Sbjct: 44 cccatattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaaca 103
Query: 73 tcaatat 79
|| ||||
Sbjct: 104 tctatat 110
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 13 cccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaaca 72
||||||||||||| ||||||||||||||||| | |||| ||| || |||||||||||
Sbjct: 119 cccacattcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaaca 60
Query: 73 tcaatat 79
|| ||||
Sbjct: 59 tctatat 53
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaat 39
|||||| ||||||| ||||||||||| ||||||||||||
Sbjct: 87 attctagcatttcctacattcatattgatgttaatgaat 49
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctaga 44
||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 98 ttctagcattgcccacattcatatagatgttaatgaatctaga 56
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatat 53
||||||||||||||||||| ||| ||||||| ||||| | ||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactagacatatatat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaatctagatagatatat 53
||||||||||||||||||| ||| |||| |||||||| | ||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctagacatatatat 67
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 atcaatataaatgtgggaaatgttag 107
|||||||| |||||||||||||||||
Sbjct: 26 atcaatatgaatgtgggaaatgttag 1
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 atcaatataaatgtgggaaatgttag 107
|||||||| |||||||||||||||||
Sbjct: 91 atcaatatgaatgtgggaaatgttag 116
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 45 tagatatatatgtttagattcattaacatc 74
||||| ||||||||||||||||||||||||
Sbjct: 87 tagatgtatatgtttagattcattaacatc 58
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 22 atattaatgttaatgaatctagatagatat 51
||||| ||||||||||||||||||||||||
Sbjct: 82 atattgatgttaatgaatctagatagatat 53
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatata 80
||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatata 83
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa
Japonica Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 31 ttaatgaatctagatagatatatatgtttagattcattaacatcaatata 80
|||||||||||||||| || ||| | | |||||||||||||||| |||||
Sbjct: 99 ttaatgaatctagatatatgtatgtttctagattcattaacatctatata 50
Score = 48.1 bits (24), Expect = 2e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagatagatatatatgtttagattcattaacatcaatataaat 83
||||||||||||||||| | ||| |||| | |||||||||||| ||| | ||||||
Sbjct: 57 atgttaatgaatctagaaacatacatatatctagattcattaatatctaaataaat 112
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattaatgttaatgaatcta 42
|||| ||||||||||||| |||||||||||||||
Sbjct: 95 attttccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagata 46
|||||| ||||| | | ||||||||| |||||||||||||||||||
Sbjct: 32 attctagcattttctatattcatattgatgttaatgaatctagata 77
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatcta 42
||||| |||| ||||||||||||| |||||||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 51 tatatgtttagattcattaacatcaatataaat 83
||||||| ||||||||||| |||||||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaat 49
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagat 45
|||||| ||||| |||||||||||| ||| ||||||||||||||
Sbjct: 32 attctagcatttttcacattcatattgatgctaatgaatctagat 76
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 6e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatat 53
|||||| |||| | ||||||||||| ||||||||||||||||| | ||||||
Sbjct: 105 attctagcattgcacacattcatatagatgttaatgaatctagacatatatat 53
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 48 atatatatgtttagattcattaacatcaatat 79
|||||||||| |||||||||||||||| ||||
Sbjct: 53 atatatatgtctagattcattaacatctatat 84
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatct 41
|||||| |||||| |||||||||||| ||| ||||||||||
Sbjct: 108 attctagcatttctcacattcatattgatgctaatgaatct 68
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagat 49
|||||| |||||| || ||| ||||| |||||||| |||||||||||||
Sbjct: 118 attctagcatttctcatatttatattgatgttaataaatctagatagat 70
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatcta 42
||||| |||| ||||||||||||| |||||||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 48 atatatatgtttagattcattaacatcaatata 80
|||||| |||||||||||||||||||| |||||
Sbjct: 55 atatatgtgtttagattcattaacatctatata 87
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatct 41
|||||| ||||||||||||||| ||| || |||||||||||
Sbjct: 108 attctagcatttcccacattcacattgatattaatgaatct 68
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 82 atcaatataaatgtgggaaatgttagaat 110
|||||||||||||||||||||| ||||||
Sbjct: 60 atcaatataaatgtgggaaatgctagaat 32
Score = 46.1 bits (23), Expect = 9e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatat 51
|||||| ||||||||||||| ||||| || ||||| ||| |||||| ||||
Sbjct: 32 attctagcatttcccacatttatattgatattaataaatttagataaatat 82
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatatt 26
|||||| |||||||||||||||||||
Sbjct: 109 attctagcatttcccacattcatatt 84
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatga 37
|||||| |||||||||||||||||| ||||||||||
Sbjct: 103 attctagcatttcccacattcatatcgatgttaatga 67
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaa 34
|||||| |||||||||||||||||| |||||||
Sbjct: 32 attctagcatttcccacattcatatcgatgttaa 65
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatcta 42
||||| |||| ||||||||||||| |||||||||||||||
Sbjct: 112 ttctagcattgcccacattcatatagatgttaatgaatcta 72
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatct 41
|||||| |||| ||||||||||||| ||||||||||||||
Sbjct: 32 attctagcattgcccacattcatatagatgttaatgaatct 72
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 48.1 bits (24), Expect = 2e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagatagatatatatgtttagattcattaacatcaatat 79
|||||||||||| |||| | || || |||||||||||||||||||| ||||
Sbjct: 59 atgttaatgaatatagacatatgtacgtgtttagattcattaacatctatat 110
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 24 attaatgttaatgaatctagatagatat 51
||||||||||||||||||||| ||||||
Sbjct: 55 attaatgttaatgaatctagacagatat 82
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattaatgttaatgaatctaga 44
|||||||| ||||||||| ||| |||||||||||||
Sbjct: 101 atttcccatattcatattgatgctaatgaatctaga 66
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctaga 44
|||||| |||| ||||||| ||||| |||||||||||||||||
Sbjct: 105 attctagcattgcccacatgcatatagatgttaatgaatctaga 62
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 48 atatatatgtttagattcattaacatcaatat 79
|||||||||| ||||||||||| |||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatat 84
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa
Japonica Group
Length = 140
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 atatgtttagattcattaacatcaatat 79
||||||||||||||||||||||| ||||
Sbjct: 61 atatgtttagattcattaacatctatat 88
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 52 atatgtttagattcattaacatcaatat 79
||||||||||||||||||||||| ||||
Sbjct: 80 atatgtttagattcattaacatctatat 53
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 8 catttcccacattcatattaatgttaatgaat 39
||||||||||||||||||| ||| ||||||||
Sbjct: 80 catttcccacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatg 36
|||||| |||||| |||||| |||||||||||||||
Sbjct: 32 attctagcatttctcacatttatattaatgttaatg 67
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa
Indica Group
Length = 141
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 53 tatgtttagattcattaacatcaatataaat 83
||||| |||||||||||||||| ||||||||
Sbjct: 63 tatgtctagattcattaacatctatataaat 93
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 9e-05
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| | | |||||||| ||| ||||||||||| | |||||||||||||
Sbjct: 32 attctaacattttctatattcatatagatgctaatgaatctatacgcatatatatgttta 91
Query: 61 gattcattaacatcaatat 79
|||||||| |||| ||||
Sbjct: 92 aattcattagcatctatat 110
Score = 46.1 bits (23), Expect = 9e-05
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgttta 60
|||||| ||||| |||||||||||| ||| |||||||| || | | |||||| || ||
Sbjct: 131 attctagcattttccacattcatatagatgctaatgaatttaaacatatatatgcgtata 72
Query: 61 gattcattaacatcaatat 79
||||||||| |||| ||||
Sbjct: 71 gattcattagcatctatat 53
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 46.1 bits (23), Expect = 9e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctaga 44
||||| |||| ||||||||||||| |||||||||||| ||||
Sbjct: 33 ttctagcattgcccacattcatatagatgttaatgaatttaga 75
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 9e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaat 39
|||||| ||||||| ||||||||||| || |||||||||
Sbjct: 99 attctagcatttccaacattcatattgatattaatgaat 61
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 46.1 bits (23), Expect = 9e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctaga 44
||||| |||| ||||||||||||| | |||||||||||||||
Sbjct: 33 ttctagcattgcccacattcatatatacgttaatgaatctaga 75
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 48 atatatatgtttagattcattaacatc 74
|||||||||| ||||||||||||||||
Sbjct: 84 atatatatgtctagattcattaacatc 58
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 46.1 bits (23), Expect = 9e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctaga 44
||||| |||| ||||||||||||| | |||||||||||||||
Sbjct: 100 ttctagcattgcccacattcatatatacgttaatgaatctaga 58
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 14 ccacattcatattaatgttaatgaatctaga 44
|||||||||||| |||||||||||||||||
Sbjct: 92 ccacattcatatagatgttaatgaatctaga 62
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatatta 27
|||||| ||||||||||||||||||||
Sbjct: 92 attctagcatttcccacattcatatta 66
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 46.1 bits (23), Expect = 9e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatctag 43
|||||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 104 attctatcatttttcacgttcatattgatgctaatgaatctag 62
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 9e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctaga 44
||||| |||| ||||||||||||| ||| |||||||||||||
Sbjct: 130 ttctaacattgcccacattcatatagatgctaatgaatctaga 88
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 46.1 bits (23), Expect = 9e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaat 39
|||||| ||||| ||| ||||||||| ||||||||||||
Sbjct: 32 attctagcattttccatattcatattgatgttaatgaat 70
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 46.1 bits (23), Expect = 9e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaat 39
|||||| |||||| |||||||||||| |||||||||||
Sbjct: 32 attctagcatttctcacattcatattgctgttaatgaat 70
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 46.1 bits (23), Expect = 9e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctaga 44
||||| |||| ||||||||||||| |||||||| ||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaataaatctaga 64
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 14 ccacattcatattaatgttaatgaatctaga 44
|||||||||||| |||||||||||||||||
Sbjct: 95 ccacattcatatatatgttaatgaatctaga 65
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgt 31
|||||| ||||||||||||||||||| ||||
Sbjct: 105 attctagcatttcccacattcatattgatgt 75
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 54 atgtttagattcattaacatcaatataaat 83
|||| ||||||||||| |||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaat 49
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
|||||| |||||| || ||||||||| || ||||||||||||
Sbjct: 99 attctagcatttctcatattcatattgatattaatgaatcta 58
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctag 43
||||| |||| ||||||||||||| ||||||| ||||||||
Sbjct: 33 ttctagcattgcccacattcatatagatgttaacgaatctag 74
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatatt 26
|||||| |||||||||||||||||||
Sbjct: 109 attctagcatttcccacattcatatt 84
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 atatatgtttagattcattaacatcaatataaat 83
|||||| | ||||||||||| |||||||||||||
Sbjct: 75 atatatctctagattcattagcatcaatataaat 108
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 2 ttctatcatttcccacattcatattaatgttaatgaatctag 43
||||| |||| ||||||| ||||| ||||||||||||||||
Sbjct: 119 ttctagcattgcccacatacatatagatgttaatgaatctag 78
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 8 catttcccacattcatattaatgttaatga 37
||||| ||||||||||||| ||||||||||
Sbjct: 39 cattttccacattcatattgatgttaatga 68
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
|||||| ||||| ||||||||||||| ||||| |||||||||
Sbjct: 32 attctagcattttccacattcatattgatgtt-atgaatcta 72
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatattaatgttaatgaa 38
|||||| ||||||||||||| ||| | |||||||||||
Sbjct: 94 attctagcatttcccacatttatactgatgttaatgaa 57
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 62 attcattaacatcaatataaat 83
||||||||||||||||||||||
Sbjct: 78 attcattaacatcaatataaat 57
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 cccacattcatattaatgttaatgaatcta 42
||||||||||||| |||||||||||||||
Sbjct: 44 cccacattcatatagatgttaatgaatcta 73
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 cccacattcatattaatgttaatgaatcta 42
||||||||||||| |||||||||||||||
Sbjct: 121 cccacattcatatagatgttaatgaatcta 92
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 81 aatcaatataaatgtgggaaatgttagaat 110
||||||||| ||||||||||||| ||||||
Sbjct: 61 aatcaatatgaatgtgggaaatgctagaat 32
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 attctatcatttcccacattcatatt 26
|||||| |||||||||||||||||||
Sbjct: 32 attctagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatatt 26
|||||| |||||||||||||||||||
Sbjct: 88 attctagcatttcccacattcatatt 63
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 attctatcatttcccacattcatatt 26
|||||| |||||||||||||||||||
Sbjct: 87 attctagcatttcccacattcatatt 62
