miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 gtactaggataagtcacatccaaccaaaatcccttatatttagggacagagagagtat 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||| ||||||||||||| ||||||||||||||||||| |||||
Sbjct: 109 gtcacatccaaccaaaatcccttatatttagggacagagggagta 153
>RF00906;MIR1122;AC078829.10/4988-5143 39947:Oryza sativa Japonica
Group
Length = 156
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 89 tctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagggac 147
|||||||| | |||||||| |||||||| ||||||||||||| ||||||||||||||||
Sbjct: 73 tctagattcacagtactagaatacgtcacatccaaccaaaatctcttatatttagggac 15
>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
Group
Length = 156
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 89 tctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagggaca 148
|||||||| ||||||| |||||||||||||||||||||||| |||||||||| ||||
Sbjct: 73 tctagattcgtagtactgggatacgtcatatccaaccaaaatcccttatatttaaggacg 14
Query: 149 gagagagtat 158
||| ||||||
Sbjct: 13 gagggagtat 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 99 tagtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
||||||||||||||||| ||||| ||||||| ||||||||||||||| ||| ||||||
Sbjct: 94 tagtactaggatacgtcccatccacccaaaatcccttatatttagggacggagggagtat 153
>RF00906;MIR1122;AP005896.3/119867-120022 39947:Oryza sativa
Japonica Group
Length = 156
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 89 tctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagggaca 148
|||||||| ||||||| |||||||||||||||||||||||| |||||||||| ||||
Sbjct: 84 tctagattcgtagtactgggatacgtcatatccaaccaaaatcccttatatttacggacg 143
Query: 149 gagagagtat 158
||| ||||||
Sbjct: 144 gagggagtat 153
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 99 tagtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||||| |||||||||| ||||| ||||||| ||||||||||||||| ||| ||||||
Sbjct: 63 tagtaccaggatacgtcccatccacccaaaatcccttatatttagggacggagggagtat 4
>RF00906;MIR1122;AACV01018415.1/900-764 39947:Oryza sativa Japonica
Group
Length = 137
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||| |||| |||| |||||||||||| ||||||||||||||||||||| |||||
Sbjct: 61 gtactaagataagtcacatccaaccaaaacatcttatatttagggacagagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 113 gtcatatccaaccaaaatatcttatatttagggac 147
|||| |||||||||||||| |||||||||||||||
Sbjct: 89 gtcacatccaaccaaaataccttatatttagggac 123
>RF00906;MIR1122;AAAA02032462.1/25561-25405 39946:Oryza sativa
Indica Group
Length = 157
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggacag 149
||||||||||| |||| ||||||||||||| ||||||||||||||||||
Sbjct: 61 gtactaggatatgtcacatccaaccaaaatctcttatatttagggacag 13
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 102 tactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
||||||||| |||| ||||||||||||| ||||||||||||||
Sbjct: 98 tactaggatgtgtcacatccaaccaaaatcccttatatttaggga 142
>RF00906;MIR1122;AC087851.4/84630-84468 4530:Oryza sativa (rice)
Length = 163
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 99 tagtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||||||||||||| ||| ||||||||||||| ||||||||||||||| ||| ||||||
Sbjct: 101 tagtactaggatacatcacatccaaccaaaatcccttatatttagggacggagggagtat 160
Query: 159 c 159
|
Sbjct: 161 c 161
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 99 tagtactaggatacgtcatatccaaccaaaatatcttatatttagggac 147
|||||||||||||| ||||||||||||||||| | |||||||||||||
Sbjct: 63 tagtactaggatacatcatatccaaccaaaattccctatatttagggac 15
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 86 ttgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggg 145
||||| |||||||| |||||||||| |||| ||||||||||||| |||||||||||||
Sbjct: 81 ttgtccagatttattgtactaggatgtgtcacatccaaccaaaatcccttatatttaggg 140
Query: 146 acagagagagta 157
|| ||| |||||
Sbjct: 141 acggagggagta 152
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||| |||| |||| | ||||||||||| ||||||||||||||| ||| |||||
Sbjct: 61 gtactaagatatgtcacacccaaccaaaatcccttatatttagggacggagggagta 5
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa Japonica
Group
Length = 156
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||| ||||| | |||||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 75 tgtccagattcaaagtactagaatacgtcacatccaaccaaaatcccttatatttaggga 16
Query: 147 cagagagagta 157
| ||| |||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01013612.1/22689-22534 39947:Oryza sativa
Japonica Group
Length = 156
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 89 tctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagggac 147
||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||||
Sbjct: 73 tctagatttattgtactaggatatatcatatccaaacaaaatcccttatatttagggac 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 117 tatccaaccaaaatatcttatatttagggacagagagagtat 158
|||||||||||||| ||||||||||||||| ||| ||||||
Sbjct: 112 tatccaaccaaaatcccttatatttagggacggagggagtat 153
>RF00906;MIR1122;AP003411.4/11367-11230 39947:Oryza sativa Japonica
Group
Length = 138
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggac 147
|||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 61 gtactaggatacgtcacatccaaccaaaatcccttatatttagggac 15
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
||||||| ||| |||| |||||||||||||||||||||||||||||
Sbjct: 78 gtactagaatatgtcacatccaaccaaaatatcttatatttaggga 123
>RF00906;MIR1122;AP008217.1/27843705-27843861 39947:Oryza sativa
Japonica Group
Length = 157
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 99 tagtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||||||||||||||| ||| ||| ||||| ||||||||||||||||||| |||||
Sbjct: 63 tagtactaggatacgtcacatcgaactaaaatcccttatatttagggacagagggagta 5
>RF00906;MIR1122;DQ454157.1/29550-29395 39947:Oryza sativa Japonica
Group
Length = 156
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 89 tctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagggaca 148
||||||||||| ||| ||||||| || ||||||| |||||| ||||||||||||||||
Sbjct: 84 tctagatttattgtattaggatatatcgtatccaaacaaaatctcttatatttagggacg 143
Query: 149 gagagagta 157
||| |||||
Sbjct: 144 gagggagta 152
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 92 agatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagggacagag 151
|||||| | ||| ||||||| || |||||||||||||| |||||||||| |||| |||
Sbjct: 70 agatttgttgtattaggatatatcgtatccaaccaaaatcccttatatttaaggacggag 11
Query: 152 agagtat 158
||||||
Sbjct: 10 tgagtat 4
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttag 143
|||| ||||| || ||||||| ||| |||| ||||||||||||||||||||||||||
Sbjct: 75 tgtccagattcatcgtactagaatatgtcacatccaaccaaaatatcttatatttag 19
Score = 44.1 bits (22), Expect = 6e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||| ||||||||||| | |||||||||||||||| ||| ||||||
Sbjct: 84 gtcacatccaaccaaatt-tcttatatttagggacggagggagtat 128
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||||||| |||| ||||||||||||| |||||||||||||||| ||| |||||
Sbjct: 71 gtactaggatgtgtcacatccaaccaaaatctcttatatttagggacggagggagta 127
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 103 actaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||||| |||| ||||||||||||| ||||||||||||||| |||||||||
Sbjct: 59 actaggatgtgtcacatccaaccaaaatcccttatatttagggacggagagagta 5
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||||||||| ||| ||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 61 gtactaggatacatcacatccaaccaaaatcccttatatttagggacggagggagta 5
>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
Japonica Group
Length = 155
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 102 tactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||||||||| |||| ||||||||||||| ||||||||||||||| ||| ||||||
Sbjct: 96 tactaggatatgtcacatccaaccaaaatcccttatatttagggacggagggagtat 152
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 119 tccaaccaaaatatcttatatttagggacagag 151
|||||||||||| |||||||||||||||||||
Sbjct: 43 tccaaccaaaatcccttatatttagggacagag 11
>RF00906;MIR1122;AC232160.1/3827-3951 63629:Oryza minuta
Length = 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||| ||||| || ||||||||||| ||| |||||||||||||| ||||||||| ||||
Sbjct: 75 tgtccagattcattgtactaggatatgtcctatccaaccaaaatcacttatattttggga 16
Query: 147 cagagagagtat 158
| ||| ||||||
Sbjct: 15 cggagggagtat 4
>RF00906;MIR1122;AC117264.2/98879-99034 39947:Oryza sativa Japonica
Group
Length = 156
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||||| ||| || |||||| |||||||||||||||| |||||| | ||||||||||||
Sbjct: 75 tgtctatattcattgtactatgatacgtcatatccaagcaaaatcccatatatttaggga 16
Query: 147 cagagagagtat 158
| ||| ||||||
Sbjct: 15 cggagggagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 109 atacgtcatatccaaccaaaatatcttatatttagggac 147
|||||||||||||| ||||||| ||||||||| |||||
Sbjct: 104 atacgtcatatccagccaaaattccttatattttgggac 142
>RF00906;MIR1122;AACV01004468.1/36611-36456 39947:Oryza sativa
Japonica Group
Length = 156
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 86 ttgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggg 145
||||| |||||||| |||||||||| |||| ||||||||||||| |||||||||||||
Sbjct: 81 ttgtccagatttattgtactaggatgtgtcacatccaaccaaaatcccttatatttaggg 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 120 ccaaccaaaatatcttatatttagggacagagagagta 157
||||| ||||| ||||||||||||||| |||||||||
Sbjct: 42 ccaactaaaatcccttatatttagggacggagagagta 5
>RF00906;MIR1122;AAAA02031042.1/16213-16344 39946:Oryza sativa
Indica Group
Length = 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
||||||||||||| |||||||||| |||| || |||||||||| |||||||||||||
Sbjct: 75 tgtctagatttattgtactaggatgtgtcacatacaaccaaaatccattatatttaggga 16
Query: 147 cagagagagta 157
| ||| |||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa Japonica
Group
Length = 110
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
||||||||||||| ||||||| || |||| ||| ||||||||| ||||||||||||||
Sbjct: 36 tgtctagatttattgtactagaatgtgtcacatctaaccaaaatcgcttatatttaggga 95
Query: 147 cagagagagta 157
| ||| |||||
Sbjct: 96 cggagggagta 106
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||||||||| | |||||||||| |||| ||||||||||||| ||||||||||||||
Sbjct: 41 tgtctagattcgttgtactaggatgtgtcacatccaaccaaaatcccttatatttaggga 100
Query: 147 cagagagagta 157
| ||| |||||
Sbjct: 101 cggagggagta 111
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 88 gtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagggac 147
||||||||| |||||||| ||||||||| ||||||||||||| ||||||||||| ||
Sbjct: 46 gtctagattcgtagtactaagatacgtcacatccaaccaaaatcctttatatttaggaac 105
Query: 148 agagagagtat 158
||| ||||||
Sbjct: 106 ggagggagtat 116
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 118 atccaaccaaaatatcttatatttagggacagagagagta 157
||||||||||||| ||||||||||||||||||| |||||
Sbjct: 44 atccaaccaaaatcccttatatttagggacagagggagta 5
>RF00906;MIR1122;AP005546.3/18651-18523 39947:Oryza sativa Japonica
Group
Length = 129
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||||||||| | ||| |||||| ||||| |||| |||||||| ||||||||||||||
Sbjct: 75 tgtctagattcgttgtaataggatgcgtcacatcccaccaaaatcccttatatttaggga 16
Query: 147 cagagagagta 157
||||| |||||
Sbjct: 15 cagagggagta 5
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 105 taggatacgtcatatccaaccaaaatatcttatatttag 143
||||||| |||| ||||||||||||||||||||||||||
Sbjct: 57 taggatatgtcacatccaaccaaaatatcttatatttag 19
Score = 44.1 bits (22), Expect = 6e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||| ||||||||||| | |||||||||||||||| ||| ||||||
Sbjct: 84 gtcacatccaaccaaatt-tcttatatttagggacggagggagtat 128
>RF00906;MIR1122;AAAA02021292.1/4370-4241 39946:Oryza sativa Indica
Group
Length = 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 92 agatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagggacagag 151
||||| ||||||||||||| |||| ||||| ||||||| |||||||||| |||| |||
Sbjct: 61 agattcatagtactaggatgtgtcacatccatccaaaatctcttatattttgggatggag 120
Query: 152 agagta 157
||||||
Sbjct: 121 agagta 126
>RF00906;MIR1122;AL935154.2/282-414 4530:Oryza sativa (rice)
Length = 133
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||| ||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 49 gtcacatccaaccaaaatcccttatatttagggacagagtgagtat 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 102 tactaggatacgtcatatccaaccaaaatatcttatatttagggac 147
|||||| ||| |||| ||||||||||||| |||||||||||||||
Sbjct: 76 tactagaatatgtcacatccaaccaaaatcccttatatttagggac 121
>RF00906;MIR1122;AP008207.1/7610981-7610850 39947:Oryza sativa
Japonica Group
Length = 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||||||||| |||||||||||| ||||| ||||||||||||||| ||| ||||||
Sbjct: 72 gtactaggatgtgtcatatccaacaaaaatcccttatatttagggaccgagggagtat 129
>RF00906;MIR1122;AC144738.2/99574-99421 39947:Oryza sativa Japonica
Group
Length = 154
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 86 ttgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttag 143
|||||||||||| ||||||||| ||||| ||||| ||||||||| |||||||||||
Sbjct: 76 ttgtctagatttgtagtactagactacgttatatcaaaccaaaatcccttatatttag 19
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 109 atacgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||| ||| ||||||||||||| |||||||||||||||| ||| ||||||
Sbjct: 88 atacatcacatccaaccaaaatctcttatatttagggacggagggagtat 137
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 118 atccaaccaaaatatcttatatttagggac 147
||||||||||||| |||||||||||||||
Sbjct: 44 atccaaccaaaatcccttatatttagggac 15
>RF00906;MIR1122;AP008212.1/4114034-4113904 39947:Oryza sativa
Japonica Group
Length = 131
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||| |||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 49 gtcacatccaaccaaaatatcttatatttagagacggagaaagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||| ||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 83 gtcacatcgaaccaaaatcccttatatttagggacagagggagta 127
>RF00906;MIR1122;AP008217.1/17033148-17033044 39947:Oryza sativa
Japonica Group
Length = 105
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 57 gtcatatccaaccaaaatcctttatatttagggacagagggagta 101
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 86 ttgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggg 145
||||| ||||| || ||| ||||||| |||| ||||||||||||| |||||||||||||
Sbjct: 81 ttgtccagattcattgtattaggatatgtcacatccaaccaaaatcccttatatttaggg 140
Query: 146 a 146
|
Sbjct: 141 a 141
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa Japonica
Group
Length = 156
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 86 ttgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggg 145
||||| ||||| || ||| ||||||| |||| ||||||||||||| |||||||||||||
Sbjct: 81 ttgtccagattcattgtattaggatatgtcacatccaaccaaaatcccttatatttaggg 140
Query: 146 a 146
|
Sbjct: 141 a 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 102 tactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||||||| | || ||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 60 tactaggatatgccacatccaaccaaaatcccttatatttagggacggagggagta 5
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa Indica
Group
Length = 156
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 109 atacgtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||||| ||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 53 atacgtcacatccaaccaaaatcccttatatttagggacggagggagta 5
>RF00906;MIR1122;AAAA02001165.1/17166-17008 39946:Oryza sativa
Indica Group
Length = 159
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagta 157
||||||||| |||||||| |||||||||||||||| ||| |||||
Sbjct: 111 gtcatatcccaccaaaatctcttatatttagggacggagggagta 155
>RF00906;MIR1122;AACV01023140.1/37073-36969 39947:Oryza sativa
Japonica Group
Length = 105
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 57 gtcatatccaaccaaaatcctttatatttagggacagagggagta 101
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 113 gtcatatccaaccaaaatatcttatatttagggac 147
||||||| |||||||||| |||||||||||||||
Sbjct: 49 gtcatattcaaccaaaatcccttatatttagggac 15
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa Japonica
Group
Length = 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 84 gtcatatccaaccaaaatcccttatatttagggacggagggagta 128
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 92 agatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagggacagag 151
|||||| | ||||||| |||| ||| |||| |||||||| ||||||||||||||| |||
Sbjct: 70 agatttgttgtactagaatacatcacatccgaccaaaatcccttatatttagggacggag 11
Query: 152 agagtat 158
||||||
Sbjct: 10 ggagtat 4
>RF00906;MIR1122;AACV01003381.1/5259-5104 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 99 tagtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||||| |||||||||| ||||| ||||||| ||||||||||||||| ||| ||||||
Sbjct: 63 tagtaccaggatacgtcccatccacccaaaatcccttatatttagggacggagggagtat 4
>RF00906;MIR1122;AL606686.3/85873-85713 39947:Oryza sativa Japonica
Group
Length = 161
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaa 129
|||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 87 tgtctagattcgtagtactaggatacgtcccatccaaccaaaa 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaa 129
|||| ||||| ||||||||||||||| ||| |||||| |||||
Sbjct: 79 tgtcgagattcatagtactaggatacatcacatccaaacaaaa 37
>RF00906;MIR1122;AACV01024429.1/20135-20005 39947:Oryza sativa
Japonica Group
Length = 131
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggac 147
||||||||||| || ||||||||||||||| ||| |||||||||||
Sbjct: 71 gtactaggatatgttatatccaaccaaaatcccttttatttagggac 117
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 103 actaggatacgtcatatccaaccaaaatatcttatatttagggac 147
|||||||||||| | |||||| |||||| |||||||||||||||
Sbjct: 59 actaggatacgttacatccaatcaaaatcccttatatttagggac 15
>RF00906;MIR1122;AAAA02000609.1/11944-11814 39946:Oryza sativa
Indica Group
Length = 131
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 123 accaaaatatcttatatttagggacagagagagta 157
||||||||||||| |||||||||| ||||||||||
Sbjct: 93 accaaaatatcttgtatttagggatagagagagta 127
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 123 accaaaatatcttatatttagggac 147
|||||||||||||||||||||||||
Sbjct: 39 accaaaatatcttatatttagggac 15
>RF00906;MIR1122;AP003948.2/13023-12867 39947:Oryza sativa Japonica
Group
Length = 157
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 100 agtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||||||||||| |||| ||||| ||||||| ||||||||| ||||| ||| ||||||
Sbjct: 96 agtactaggatatgtcacatccacccaaaatctcttatattatgggacggagggagtat 154
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 92 agatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
||||| |||||||||||||| ||| ||||| ||||||| ||||||||| ||||
Sbjct: 70 agattcatagtactaggatatatcacatccacccaaaatcccttatattttggga 16
>RF00906;MIR1122;AAAA02023225.1/29655-29800 39946:Oryza sativa
Indica Group
Length = 146
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggac 147
||||||||||| |||| ||| ||||||||| |||||||||||||||
Sbjct: 87 gtactaggatatgtcacatctaaccaaaatcccttatatttagggac 133
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 105 taggatacgtcatatccaaccaaaatatcttatatttagggac 147
||||||| || | ||||||||||||| |||||||||||||||
Sbjct: 56 taggatatgttacatccaaccaaaatcccttatatttagggac 14
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||||||||| || ||||||| || |||| ||| ||||||||| |||||||||||| ||
Sbjct: 83 tgtctagattcattgtactagaatgtgtcacatctaaccaaaatctcttatatttagaga 142
Query: 147 cagagagagta 157
| ||| |||||
Sbjct: 143 cggagggagta 153
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||||||||||| | ||||||| ||||| |||||||||||| || ||| |||||
Sbjct: 61 gtactaggatacgttacatccaactaaaatcccttatatttaggaacggagggagta 5
>RF00906;MIR1122;AACV01016049.1/26522-26641 39947:Oryza sativa
Japonica Group
Length = 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
||||||||||| |||| ||||||||||||| ||| ||||||||||
Sbjct: 60 gtactaggataagtcacatccaaccaaaattccttgtatttaggga 105
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||||||||| |||| |||| |||||||| ||||||||||||||| ||| ||||||
Sbjct: 61 gtactaggatgtgtcacatcccaccaaaatcccttatatttagggacggagggagtat 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 84 atttgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttag 143
||||||| ||||| | |||||||||| |||| |||| |||||||| |||||||||||
Sbjct: 79 atttgtccagattcgttgtactaggatgtgtcacatcccaccaaaatcccttatatttag 138
Query: 144 ggacagagagagta 157
|||| ||| |||||
Sbjct: 139 ggacggagggagta 152
>RF00906;MIR1122;AAAA02022081.1/28856-28717 39946:Oryza sativa
Indica Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 89 tctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||| ||| ||||||||||||| |||| ||| ||||||||| |||||||||| ||||
Sbjct: 68 tctaaattcatagtactaggatgcgtctcatctaaccaaaatctcttatattttggga 125
>RF00906;MIR1122;AAAA02032700.1/2385-2268 39946:Oryza sativa Indica
Group
Length = 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 102 tactaggatacgtcatatccaaccaaaatatcttatatttagggac 147
||||||||||||| ||||| ||||||||| ||||||||||||||
Sbjct: 59 tactaggatacgttatatctaaccaaaattctttatatttagggac 104
>RF00906;MIR1122;AP006453.3/76317-76162 39947:Oryza sativa Japonica
Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 111/137 (81%), Gaps = 3/137 (2%)
Strand = Plus / Plus
Query: 13 ctccctccgtcccaaaatattctgaaaatttggatggatgggatgaattctagtactaca 72
|||||||||||||||||||| || | ||| |||||||| || | || |||||||||||
Sbjct: 7 ctccctccgtcccaaaatata-tgggattttagatggatgtgacgcatcctagtactaca 65
Query: 73 gatctggtcatatt--tgtctagatttatagtactaggatacgtcatatccaaccaaaat 130
|||||| || | | ||||||| || ||||| |||||| |||||||||| |||||||
Sbjct: 66 aatctggacagactcctgtctagtttcgtagtattaggatgtgtcatatccatccaaaat 125
Query: 131 atcttatatttagggac 147
||||||||| |||||
Sbjct: 126 cccttatattttgggac 142
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||| |||||| |||||||||||| ||||| ||||| | ||||| | ||||||| ||||
Sbjct: 75 tgtccagatttgtagtactaggatgcgtcacatccatctaaaatcccatatattttggga 16
Query: 147 cagagagagta 157
| ||| |||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP005098.4/61806-61935 39947:Oryza sativa Japonica
Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 92 agatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagggacagag 151
||||| ||||||||||||| |||| ||||| ||||||| ||||||||| |||| |||
Sbjct: 70 agattcatagtactaggatgtgtcacatccatccaaaatcccttatattttgggatggag 11
Query: 152 agagta 157
||||||
Sbjct: 10 agagta 5
>RF00906;MIR1122;AL606618.4/52399-52286 39947:Oryza sativa Japonica
Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 118 atccaaccaaaatatcttatatttagggac 147
||||||||||||| ||||||||||||||||
Sbjct: 79 atccaaccaaaatctcttatatttagggac 50
>RF00906;MIR1122;AP008213.1/24848104-24848218 39947:Oryza sativa
Japonica Group
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 100 agtactaggatacgtcatatccaaccaaaatatcttatattt 141
|||||||||||| |||| ||||||||||||| |||||||||
Sbjct: 62 agtactaggatatgtcacatccaaccaaaatcccttatattt 21
>RF00906;MIR1122;AAAA02018804.1/15100-15261 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||| |||||| ||||||||||||| | || |||| |||||||| ||||||||| ||||
Sbjct: 75 tgtccagatttgtagtactaggatatgccacatcccaccaaaatcccttatattttggga 16
Query: 147 c 147
|
Sbjct: 15 c 15
>RF00906;MIR1122;AAAA02027999.1/6846-6708 39946:Oryza sativa Indica
Group
Length = 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 97 tatagtactaggatacgtcatatccaaccaaaa 129
||||||| ||||||| |||||||||||||||||
Sbjct: 65 tatagtaataggatatgtcatatccaaccaaaa 33
>RF00906;MIR1122;AP004556.3/98434-98589 39947:Oryza sativa Japonica
Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 85 tttgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagg 144
|||||| | ||||||||||||| |||||||| ||||| || ||| | |||||||| ||
Sbjct: 80 tttgtccatatttatagtactatgatacgtcccatccaccctaaaattattatattttgg 139
Query: 145 gacagagagagta 157
||||||| |||||
Sbjct: 140 gacagagggagta 152
>RF00906;MIR1122;AAAA02002805.1/1308-1181 39946:Oryza sativa Indica
Group
Length = 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||| ||||||||||||| |||||||||||||||||| |||||
Sbjct: 80 gtcacatccaaccaaaatcctttatatttagggacagagggagta 124
>RF00906;MIR1122;AAAA02035044.1/8508-8375 39946:Oryza sativa Indica
Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 103 actaggatacgtcatatccaaccaaaatatcttatatttagggac 147
|||||||| |||| ||||||||||||| |||||||||||||||
Sbjct: 76 actaggatgtgtcacatccaaccaaaatcccttatatttagggac 120
>RF00906;MIR1122;AC137589.2/119768-119885 39947:Oryza sativa
Japonica Group
Length = 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 99 tagtactaggatacgtcatatccaaccaaaatatcttatatttagggac 147
|||||||||||||||| ||||| ||| ||||| ||||||||||||||
Sbjct: 56 tagtactaggatacgttatatctaactaaaattctttatatttagggac 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 99 tagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||||||| ||||| | | ||||||||||||| ||||||||||||||
Sbjct: 63 tagtactaagatacattacatccaaccaaaatcccttatatttaggga 16
>RF00906;MIR1122;AL512542.2/7629-7514 4530:Oryza sativa (rice)
Length = 116
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||||||||| |||||||||||| |||| |||| |||||||| |||||||| ||||
Sbjct: 75 tgtctagattcttagtactaggatgtgtcacatcccaccaaaattccttatattatggga 16
Query: 147 cagagagagtatc 159
| ||| |||||||
Sbjct: 15 cggagggagtatc 3
>RF00906;MIR1122;AP008212.1/3593579-3593709 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 118 atccaaccaaaatatcttatatttagggacagagagagtat 158
||||||||||||| | |||||||| ||||||||| ||||||
Sbjct: 88 atccaaccaaaatcttttatattttgggacagagggagtat 128
>RF00906;MIR1122;ABRL01002047.1/990-1143 65489:Oryza barthii
Length = 154
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagta 157
||||| |||||||||||| ||||||| ||||||| |||||||||
Sbjct: 49 gtcatttccaaccaaaatcccttatatctagggacggagagagta 5
>RF00906;MIR1122;AACV01000871.1/13756-13601 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagta 157
||||||||| |||||||| ||||||||||||||| ||| |||||
Sbjct: 108 gtcatatcccaccaaaattccttatatttagggacggagggagta 152
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 99 tagtactaggatacgtcatatccaaccaaaatatcttatatttagggac 147
||||||||| | || ||| ||||||||||||| |||||||||||||||
Sbjct: 63 tagtactagaaaacatcacatccaaccaaaatcacttatatttagggac 15
>RF00906;MIR1122;AP008207.1/11769320-11769475 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagta 157
||||||||| |||||||| ||||||||||||||| ||| |||||
Sbjct: 49 gtcatatcccaccaaaattccttatatttagggacggagggagta 5
>RF00906;MIR1122;AAAA02005881.1/10102-9985 39946:Oryza sativa Indica
Group
Length = 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 119 tccaaccaaaatatcttatatttaggga 146
|||||||||||| |||||||||||||||
Sbjct: 43 tccaaccaaaatctcttatatttaggga 16
>RF00906;MIR1122;AAAA02003314.1/11232-11326 39946:Oryza sativa
Indica Group
Length = 95
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 118 atccaaccaaaatatcttatatttagggacagagagagta 157
|||||||| |||| | |||||||||||||| |||||||||
Sbjct: 44 atccaacctaaatcttttatatttagggacggagagagta 5
>RF00906;MIR1122;AAAA02018547.1/31962-31829 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaat 130
|||||||||| |||||||||||||| |||| |||| |||||||
Sbjct: 60 tgtctagattcatagtactaggatatgtcacatccttccaaaat 103
>RF00906;MIR1122;AACV01015661.1/3431-3301 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagtatca 160
|||| ||||| ||||||||||||||||| ||||| ||| ||||||||
Sbjct: 49 gtcacatccacccaaaatatcttatattatgggacggagggagtatca 2
>RF00906;MIR1122;AAAA02031413.1/6510-6355 39946:Oryza sativa Indica
Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 86 ttgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggg 145
||||||||||| | |||||||||| ||| ||||||||||||| |||||||||||||
Sbjct: 81 ttgtctagattcgttgtactaggatgtatcacatccaaccaaaatcccttatatttaggg 140
>RF00906;MIR1122;AP008207.1/29270032-29270129 39947:Oryza sativa
Japonica Group
Length = 98
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 118 atccaaccaaaatatcttatatttagggacagagagagta 157
|||||||||||| | |||||||| |||||||||||||||
Sbjct: 44 atccaaccaaaagttgttatattttgggacagagagagta 5
>RF00906;MIR1122;AP004706.3/101051-100895 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||| ||||| || ||||||||||| |||| ||||| ||||||| |||||||| ||||
Sbjct: 83 tgtccagattgattgtactaggatatgtcacatccacccaaaatcccttatattatggga 142
Query: 147 cagagagagtat 158
| ||| ||||||
Sbjct: 143 cggagggagtat 154
>RF01058;MIR806;AP008208.1/4894652-4894404 39947:Oryza sativa
Japonica Group
Length = 249
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 136 atatttagggacagagagagtat 158
|||||||||||||||||||||||
Sbjct: 23 atatttagggacagagagagtat 1
>RF01058;MIR806;CR855124.1/77360-77123 4530:Oryza sativa (rice)
Length = 238
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 136 atatttagggacagagagagtat 158
|||||||||||||||||||||||
Sbjct: 23 atatttagggacagagagagtat 1
>RF00906;MIR1122;AAAA02029602.1/21868-22024 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||| ||||| || ||||||||||| |||| ||||| ||||||| |||||||| ||||
Sbjct: 83 tgtccagattcattgtactaggatatgtcacatccacccaaaatcccttatattatggga 142
Query: 147 cagagagagta 157
| ||| |||||
Sbjct: 143 cggagggagta 153
>RF00906;MIR1122;AAAA02027402.1/5650-5805 39946:Oryza sativa Indica
Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||| |||||| |||||||||||| ||||| ||||| | ||||| | ||||||| ||||
Sbjct: 75 tgtccagatttgtagtactaggatgcgtcacatccatctaaaatcccgtatattttggga 16
Query: 147 cagagagagta 157
| ||| |||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP002816.1/33080-32947 39947:Oryza sativa Japonica
Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/50 (88%), Gaps = 2/50 (4%)
Strand = Plus / Plus
Query: 92 agatttatagtactaggatacgtcatatccaaccaaaatatcttatattt 141
||||| ||||||||||||| |||| |||||||||||| | |||||||||
Sbjct: 67 agattcatagtactaggat--gtcacatccaaccaaaaaaccttatattt 114
>RF00906;MIR1122;AC226782.1/54692-54560 63629:Oryza minuta
Length = 133
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gttctccctccgtcccaaaatat 32
|||||||||||||||||||||||
Sbjct: 130 gttctccctccgtcccaaaatat 108
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||
Sbjct: 83 tgtctagattcgtagtactaggatgtgtcccatccaaccaaaactccttatattttggga 142
Query: 147 cagagagagta 157
| ||| |||||
Sbjct: 143 cggagggagta 153
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 113 gtcatatccaaccaaaatatcttatatttagggac 147
|||||||||||||||||| ||||||||||||||
Sbjct: 49 gtcatatccaaccaaaatccgttatatttagggac 15
>RF00906;MIR1122;AP008208.1/20080058-20080152 39947:Oryza sativa
Japonica Group
Length = 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttag 143
||||||| ||| ||| ||||||||||||| ||||||||||||
Sbjct: 61 gtactagaatatatcacatccaaccaaaatctcttatatttag 19
>RF00906;MIR1122;AACV01007836.1/7963-7867 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 112 cgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
||||| ||||||| ||||| |||||||||||||||| || ||||||
Sbjct: 50 cgtcacatccaactaaaatcccttatatttagggacaaagggagtat 4
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||
Sbjct: 83 tgtctagattcgtagtactaggatgtgtcccatccaaccaaaactccttatattttggga 142
Query: 147 cagagagagta 157
| ||| |||||
Sbjct: 143 cggagggagta 153
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 119 tccaaccaaaatatcttatatttagggacagagagagta 157
|||||||||||| ||||||||||||| || ||| |||||
Sbjct: 38 tccaaccaaaatctcttatatttaggaacggagggagta 76
>RF00906;MIR1122;AACV01025355.1/1742-1876 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 123 accaaaatatcttatatttagggacagagagagta 157
|||||||| ||||||||||||||||||| |||||
Sbjct: 39 accaaaatcccttatatttagggacagagggagta 5
>RF00906;MIR1122;AAAA02016762.1/20933-20809 39946:Oryza sativa
Indica Group
Length = 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 99 tagtactaggatacgtcatatccaaccaaaatatcttatattt 141
||||||||||||| |||| ||||| ||||||| | ||||||||
Sbjct: 63 tagtactaggatatgtcacatccacccaaaatcttttatattt 21
>RF00906;MIR1122;AACV01019101.1/4942-4817 39947:Oryza sativa
Japonica Group
Length = 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatcc 121
|||| ||||| |||||||||||||| |||||||||
Sbjct: 75 tgtccagattcatagtactaggatatgtcatatcc 41
>RF01058;MIR806;AACV01021465.1/38777-38537 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 136 atatttagggacagagagagta 157
||||||||||||||||||||||
Sbjct: 219 atatttagggacagagagagta 240
>RF01058;MIR806;AC130602.5/52537-52779 39947:Oryza sativa Japonica
Group
Length = 243
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 136 atatttagggacagagagagta 157
||||||||||||||||||||||
Sbjct: 221 atatttagggacagagagagta 242
>RF00906;MIR1122;AACV01024343.1/13819-13664 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 92 agatttatagtactaggatacgtcatatccaaccaaaatatcttatatttagggacagag 151
|||||||| ||||||||| || ||||||||| ||||| ||||||||||| ||| |||
Sbjct: 70 agatttattatactaggatgtgttatatccaactaaaatcccttatatttagagacggag 11
Query: 152 agagta 157
|||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AAAA02026694.1/32137-32261 39946:Oryza sativa
Indica Group
Length = 125
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 117 tatccaaccaaaatatcttatatttagggacagagagagtat 158
|||||||||||||| ||||||||| ||||| ||| ||||||
Sbjct: 81 tatccaaccaaaatcccttatattttgggacggagggagtat 122
>RF00906;MIR1122;AP008216.1/3083672-3083805 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 113 gtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||| ||||| | ||||| ||||||||| ||||||||||||||||
Sbjct: 49 gtcacatccacctaaaatctcttatattatgggacagagagagtat 4
>RF00906;MIR1122;AAAA02009049.1/5149-5027 39946:Oryza sativa Indica
Group
Length = 123
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 118 atccaaccaaaatatcttatatttagggac 147
||||||||||||| |||||||||||||||
Sbjct: 41 atccaaccaaaatcccttatatttagggac 12
>RF00906;MIR1122;AAAA02013971.1/306-415 39946:Oryza sativa Indica
Group
Length = 110
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 104 ctaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagta 157
|||||||| ||||||||| ||||||| |||| |||| ||||||||||||||
Sbjct: 53 ctaggatatgtcatatccctccaaaatctcttgtattataggacagagagagta 106
>RF00906;MIR1122;AC148822.2/9529-9662 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttaggga 146
|||||||||| ||| |||||| |||||| |||||||||||||||
Sbjct: 61 gtactaggatgtttcacatccaatcaaaatctcttatatttaggga 16
>RF00906;MIR1122;AAAA02019543.1/35421-35577 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 113 gtcatatccaaccaaaatatcttatatttaggga 146
|||| ||||||||||||| ||||||||||||||
Sbjct: 49 gtcacatccaaccaaaatcccttatatttaggga 16
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 87 tgtctagatttatagtactaggatacgtcatatccaaccaaaatat 132
||||||||||| | ||||||| || | ||| |||||||||||||||
Sbjct: 70 tgtctagatttgttgtactagaatgcatcacatccaaccaaaatat 25
>RF00906;MIR1122;AAAA02026694.1/72816-72971 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 105 taggatacgtcatatccaaccaaaatatcttatatttaggga 146
||||||| |||| || ||||||||| |||||||||||||||
Sbjct: 100 taggatatgtcacttctaaccaaaatctcttatatttaggga 141
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 118 atccaaccaaaatatcttatatttagggac 147
||||||| ||||||||||||||||| ||||
Sbjct: 60 atccaactaaaatatcttatatttaaggac 89
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 101 gtactaggatacgtcatatccaaccaaaatatcttatatttagggacagagagagtat 158
|||||||||| |||| ||| |||||||| ||||||||||||||| ||| ||||||
Sbjct: 61 gtactaggatgtgtcacatcacaccaaaatcccttatatttagggacggagggagtat 118
