miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 138/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||||||||||||||| |||||| ||||||||| | || |||| ||||||||||||| |
Sbjct: 4 atacttcctccgtttcataatgtaagactttcta-gcattgcccacattcatatagatgt 62
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
||||||||||||| |||||||||| ||||||||||||| ||||||||||| || |||
Sbjct: 63 taatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaa 122
Query: 127 cgctataaagtcttacattgtgaaacggatggagtac 163
|||| ||||||||||||| ||||||||| |||||||
Sbjct: 123 tgctaaaaagtcttacattatgaaacggagggagtac 159
Score = 95.6 bits (48), Expect = 2e-19
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||||||| |||||||||||||| || || | | | ||||||||||||| ||||
Sbjct: 115 cattcatatagatgttaatgaatctagacacacatatatttctagattcattaacatcta 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||| ||| ||| |||| ||||||||||||| |||||||||
Sbjct: 55 tatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||||||||||||||||| ||||||||| |||| |||| ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttcta-gtattgcccacattcatatagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| ||||| |||| || |||||||||| ||||||||||||||| ||
Sbjct: 99 aatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagt 40
Query: 128 gctataaagtcttacattgtgaaacggatggagtac 163
||| ||||||||||||||||||||||| |||||||
Sbjct: 39 actagaaagtcttacattgtgaaacggagggagtac 4
Score = 109 bits (55), Expect = 1e-23
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||||||||||||||||| ||||||||| ||| |||| |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagactttcta-gtactgcccatattcatatagatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||| |||| | || | ||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 64 aatgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
||| ||||||||||||||||||||||| ||||||
Sbjct: 124 actagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 141 bits (71), Expect = 4e-33
Identities = 136/155 (87%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||| |||||| | ||||||| |||| |||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttcta-gtattgcccacattcatatagatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| |||| ||||| ||||||||||||| |||||||||||||| |||
Sbjct: 64 aatgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| ||||||||||||| ||||||||| ||||||
Sbjct: 124 gctagaaagtcttacattatgaaacggagggagta 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 125/148 (84%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| ||||||||||| |||||| ||||||||| | || || | |||||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttcta-gcattgctcatattcatatagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| ||||| | ||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 99 aatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaat 40
Query: 128 gctataaagtcttacattgtgaaacgga 155
||| |||| |||||||| |||||||||
Sbjct: 39 actagaaagacttacattatgaaacgga 12
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 137/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 catacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagata 65
|||||||||||||||||| |||||| ||||||||| | || | | |||||||||||||
Sbjct: 3 catacttcctccgtttcataatgtaagactttcta-gcattgtctacattcatatagatg 61
Query: 66 ttaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggaca 125
|||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 62 ttaatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggaca 121
Query: 126 acgctataaagtcttacattgtgaaacggatggagta 162
| ||| ||||||||||||| ||||||||| ||||||
Sbjct: 122 aacctagaaagtcttacattatgaaacggagggagta 158
Score = 103 bits (52), Expect = 8e-22
Identities = 126/148 (85%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| ||||||||||| |||||| ||||||||| || | | || ||||||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggttt-gtccacattcatatagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||| | || || | ||| ||||||||||||| ||||||||||| | |||||
Sbjct: 99 aatgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaat 40
Query: 128 gctataaagtcttacattgtgaaacgga 155
|||| ||||||||||||| |||||||||
Sbjct: 39 gctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 137/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||||||||||||||| |||||| ||||||||| | || |||| ||||||||||||| |
Sbjct: 159 atacttcctccgtttcataatgtaagactttcta-gcattgcccacattcatatagatgt 101
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
||||||||||||| |||||||||| ||||||||||||| ||||||||||| || ||
Sbjct: 100 taatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaa 41
Query: 127 cgctataaagtcttacattgtgaaacggatggagtac 163
|||| ||||||||||||| ||||||||| |||||||
Sbjct: 40 tgctaaaaagtcttacattatgaaacggagggagtac 4
Score = 95.6 bits (48), Expect = 2e-19
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||||||| |||||||||||||| || || | | | ||||||||||||| ||||
Sbjct: 48 cattcatatagatgttaatgaatctagacacacatatatttctagattcattaacatcta 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||| ||| ||| |||| ||||||||||||| |||||||||
Sbjct: 108 tatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 151
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 137/158 (86%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||||||||||||||||| |||||| || | || |||| |||||| ||||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagacttttta-gcattgcccatattcatttagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| || | ||||| |||||||||||||||||||||| ||||| |||
Sbjct: 99 aatgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaat 40
Query: 128 gctataaagtcttacattgtgaaacggatggagtactt 165
|||| ||||||||||||||||||||||| |||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggagggagtactt 2
Score = 95.6 bits (48), Expect = 2e-19
Identities = 125/148 (84%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||||||||||||||||| ||||||||| | || || | || |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagactttcta-gcattgctcatatacatatagacgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||| | |||| | ||| ||||||||||||| |||| |||||||||| |||
Sbjct: 64 aatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaat 123
Query: 128 gctataaagtcttacattgtgaaacgga 155
|||| |||||||||||||||||||||||
Sbjct: 124 gctaaaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||||||||||||||||| ||||||||| |||| |||| |||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttcta-gtattgcccatattcatatagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| ||||| |||| || |||||||||| ||||||||||||||| ||
Sbjct: 99 aatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagt 40
Query: 128 gctataaagtcttacattgtgaaacggatggagtac 163
||| |||||||||||| |||||||||| |||||||
Sbjct: 39 actagaaagtcttacatggtgaaacggagggagtac 4
Score = 109 bits (55), Expect = 1e-23
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||||||||||| ||||| ||||||||| ||| |||| |||||||||||| ||
Sbjct: 5 tactccctccgtttcaccatgtaagactttcta-gtactgcccatattcatatagatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||| |||| | || | ||| ||||||||||||| ||||||||||||||| |||
Sbjct: 64 aatgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
||| ||||||||||||||||||||||| ||||||
Sbjct: 124 actagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 129/148 (87%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||||||||||||||||| ||||||||| | || |||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttcta-gcattgcccgcattcatatagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||| || | ||| ||||| ||||||||||| | ||||| ||||| ||| |||
Sbjct: 99 aatgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaat 40
Query: 128 gctataaagtcttacattgtgaaacgga 155
|||| ||||||||||||| |||||||||
Sbjct: 39 gctagaaagtcttacattatgaaacgga 12
Score = 117 bits (59), Expect = 5e-26
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||| |||||| ||||||||| | || |||| |||||| |||||| |
Sbjct: 5 tacttcctccgtttcataatgtaagactttcta-gcattgcccacattcacatagatgct 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| ||||| || | ||||||||||||| ||||||||||| || |||
Sbjct: 64 aatgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| ||||||||||||||||||||||| ||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 134/155 (86%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||||||||||||||||| |||||| || || |||| |||||| |||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaac-attgcccacattcacatagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||||||||| |||||||||| ||||||||||||| ||||||||||| || |||
Sbjct: 99 aatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaat 40
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| |||||||||||||||||||||| ||||||
Sbjct: 39 gctaggaagtcttacattgtgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||||||||||||||||| ||||| ||| | || || | ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagacttccta-gcattgctcacattcatatagatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| || || | | | ||||||||||||| ||||| ||||| ||| |||
Sbjct: 64 aatgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
| || ||||||||||||||||||||||| ||||||
Sbjct: 124 gttaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||| |||||||||||||||||| ||||||||| |||| |||| | | ||||| ||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttcta-gtattgcccacgtacatatggatgt 101
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
||||||||||| || |||| | ||| ||||||||||||| |||| |||||||||| |||
Sbjct: 100 taatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaa 41
Query: 127 cgctataaagtcttacattgtgaaacgga 155
|||| |||||||||||||||||||||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacgga 12
Score = 93.7 bits (47), Expect = 7e-19
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||||||||||||||||| ||||||||| | || |||| |||||| ||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttcta-gcattgcccatattcatttagatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| || | ||| | ||||||||||||| || ||||| | ||| |||
Sbjct: 64 aatgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
||| ||||||||||||||||||||||| ||||||
Sbjct: 124 actagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| ||||||||||| ||| || ||||||||| |||| |||| |||||||||||| ||
Sbjct: 5 tactccctccgtttcataatataagactttcta-gtattgcccatattcatatagatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||| |||||| ||| | ||| ||||||||||||| ||||||||||| |||||||
Sbjct: 64 aatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
||| ||||||||||||||||||||||| ||||||
Sbjct: 124 cctaaaaagtcttacattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 132/158 (83%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||| |||||||||||||||||| |||||| || | || | || ||||||||||||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttttagg-attgtccacattcatatagatgt 101
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
||||||||||||| || | | | | ||| ||||||||| ||||||||||||||| |||
Sbjct: 100 taatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaa 41
Query: 127 cgctataaagtcttacattgtgaaacggatggagtact 164
||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 40 tactagaaagtcttatattatgaaacggagggagtact 3
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| ||||||||||| ||| || ||||||||| |||| |||| |||||||||||| ||
Sbjct: 158 tactccctccgtttcataatataagactttcta-gtattgcccatattcatatagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||| |||||| ||| | ||| ||||||||||||| ||||||||||| |||||||
Sbjct: 99 aatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaat 40
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
||| ||||||||||||||||||||||| ||||||
Sbjct: 39 cctaaaaagtcttacattgtgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 132/158 (83%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||| |||||||||||||||||| |||||| || | || | || ||||||||||||| |
Sbjct: 4 atactccctccgtttcacaatgtaagactttttagg-attgtccacattcatatagatgt 62
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
||||||||||||| || | | | | ||| ||||||||| ||||||||||||||| |||
Sbjct: 63 taatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaa 122
Query: 127 cgctataaagtcttacattgtgaaacggatggagtact 164
||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 123 tactagaaagtcttatattatgaaacggagggagtact 160
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 135/158 (85%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||||||||||||||||| ||||||||| | || ||| ||||||| ||| | ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttcta-gcattacccacattcatttagttgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| | | | | | ||||||||||||| |||||||| ||||||||||
Sbjct: 64 aatgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagtactt 165
|||| ||||||||||||||||||||||| |||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggagtactt 161
Score = 71.9 bits (36), Expect = 3e-12
Identities = 122/148 (82%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||||||||||||||||| ||||||||| | || | || || ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttcta-gcattgtccatatacatatagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||| || ||| ||| ||||||||||||| ||| |||||| ||| ||
Sbjct: 99 aatgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaat 40
Query: 128 gctataaagtcttacattgtgaaacgga 155
|||| |||||||||||||||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||||||||||||||||| | | ||||| | || ||| ||||||||| ||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattcta-gcatttcccacattcatattgatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||||||||| |||| | ||| ||||||||||||| || ||||||||||||| ||
Sbjct: 99 aatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaat 40
Query: 128 gctataaagtcttacattgtgaaacggatggagtac 163
|||| || | |||||||||||||||||| |||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagtac 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 84/103 (81%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
|||||||| ||| |||||||||||| | |||| | | | ||||||||||||| || ||
Sbjct: 49 attcatattgatgttaatgaatctatacatatatatttatctagattcattaacatcaat 108
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacgga 155
|||||| ||| || |||| || | ||||||||||||||||||
Sbjct: 109 atgaatgtgggaaatgctagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||||||||||||||||| ||||||||| | || |||| ||| |||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttcta-gcattgcccacatacatataaatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||| | |||| | ||| ||||||||||| | |||| |||||| ||| |||
Sbjct: 64 aatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| ||||||||||||||||||||||| ||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 5e-20
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||| |||||||||||||||||| ||||||||| | || |||| |||||| |||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttcta-gcattgcccaaattcatttagatgc 101
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
||||||||||||| || | ||||| ||||||||||||| | |||||| || ||| |||
Sbjct: 100 taatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaa 41
Query: 127 cgctataaagtcttacattgtgaaacgga 155
|||| |||||||||||||||||||||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 109 bits (55), Expect = 1e-23
Identities = 135/158 (85%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||||||||||||||| | | || ||||||||| | || |||| ||||||||||||| |
Sbjct: 4 atacttcctccgtttcatattataagactttcta-gcattgcccacattcatatagatgt 62
Query: 67 taatgaatctagattcatatgtgtgtgta--gattcattaacgtctatatgaatatggac 124
||||||||||| || ||||||||||||| ||||||||||| ||||||||||| ||| |
Sbjct: 63 taatgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggc 122
Query: 125 aacgctataaagtcttacattgtgaaacggatggagta 162
|| |||| ||||||||| | | ||||||||| ||||||
Sbjct: 123 aatgctagaaagtcttataatatgaaacggagggagta 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| ||||||||||| ||| ||| |||| ||||||||| | | |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 98/112 (87%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
|||||| ||||| |||||||||||||| ||||||||||| ||||||||||||| |||||
Sbjct: 112 attcatctagatgttaatgaatctaga--catatgtgtgtctagattcattaacatctat 55
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacggatggagtact 164
|||||| ||| ||| |||| |||| |||||||| ||||||||| | ||||||
Sbjct: 54 atgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagtact 3
Score = 95.6 bits (48), Expect = 2e-19
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||| |||||| | ||||||| | || |||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttcta-gcattgcccacattcatatagatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| || || ||| | |||||||||||| |||| |||||||| |||
Sbjct: 64 aatgaatctagacacacatatgtct--agattcattaacatctagatgaatataagcaat 121
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| ||||||||||||| ||||||||| ||||||
Sbjct: 122 gctacaaagtcttacattatgaaacggagggagta 156
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 132/156 (84%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
|||||||||| |||||| |||||| ||||||||| | | |||| |||| |||||||||
Sbjct: 4 atacttcctctgtttcataatgtaagactttcta-gcgttgcccacatttatatagatac 62
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
||||||||||||| ||||||||| ||||||||||| | | ||||||||| ||| |||
Sbjct: 63 taatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaa 122
Query: 127 cgctataaagtcttacattgtgaaacggatggagta 162
|||| ||||||||||||| ||||||||| ||||||
Sbjct: 123 tgctagaaagtcttacattatgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 7e-13
Identities = 120/145 (82%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| ||||||||||| |||||| ||||||||| | || |||| |||||||||| || |
Sbjct: 158 tactccctccgtttcataatgtaagactttcta-gcattgcccacattcatatatatgct 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||||||| || || | ||| ||||||||||| ||||||| ||| ||| ||||
Sbjct: 99 aatgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaac 40
Query: 128 gctataaagtcttacattgtgaaac 152
|||| ||||||||||||| ||||||
Sbjct: 39 gctagaaagtcttacattatgaaac 15
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||| |||||| | | ||||| | || |||| ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattcta-gcattgcccacatacatatagatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||| ||||| | |||||||| ||||||||||||| ||||||||||||||| ||
Sbjct: 64 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| || | |||||||| ||||||||| ||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 85/103 (82%)
Strand = Plus / Minus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
|||||||||||| |||||||||||||| || || | | | || |||||||||| |||||
Sbjct: 114 attcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatctat 55
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||| || ||| ||| |||| || | |||||||| |||||||||
Sbjct: 54 atgtatgtgggcaatgctagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 84 tatgtgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtcttaca 143
||||||||| |||||| |||||| ||||||||||| ||||||| |||| |||||||||||
Sbjct: 62 tatgtgtgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttaca 121
Query: 144 ttgtgaaacggatggagta 162
|||||||||||| ||||||
Sbjct: 122 ttgtgaaacggagggagta 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||||||||||||| || |||| ||||||||||||||||||||||| ||||||
Sbjct: 59 tctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 63/72 (87%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||||||||||||||||| ||||||||| | || | || ||||||||||||| ||
Sbjct: 140 tactccctccgtttcacaatgtaagactttcta-gcattgtccacattcatatagatgtt 82
Query: 68 aatgaatctaga 79
||| ||||||||
Sbjct: 81 aataaatctaga 70
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 92/106 (86%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| ||||||||||||||| |||||||||| | |||||||||| |||||||||||||
Sbjct: 120 gcccacattcatatagatatcaatgaatctaaacatatatgtgtgtctagattcattaac 61
Query: 107 gtctatatgaatatggacaacgctataaagtcttacattgtgaaac 152
| ||||||||| ||| ||| |||| ||||||||||||| ||||||
Sbjct: 60 atatatatgaatgtgggcaaggctagaaagtcttacattatgaaac 15
Score = 89.7 bits (45), Expect = 1e-17
Identities = 131/157 (83%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
|||||||||| |||||| |||||| ||||||||| | | |||| |||||||||| || |
Sbjct: 4 atacttcctcggtttcataatgtaagactttcta-gccttgcccacattcatatatatgt 62
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
||||||||||||| || || | ||| |||||||||| | ||||||||||| ||| |||
Sbjct: 63 taatgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaa 122
Query: 127 cgctataaagtcttacattgtgaaacggatggagtac 163
|||| ||||||||||||| |||||| || |||||||
Sbjct: 123 tgctaaaaagtcttacattatgaaaccgagggagtac 159
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 97.6 bits (49), Expect = 5e-20
Identities = 126/148 (85%), Gaps = 4/148 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| ||||||||||| |||||| ||||||||| | || ||| |||||||| ||| ||
Sbjct: 5 tactccctccgtttcataatgtaagactttcta-gcattgcctatattcatattgatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||||||| | ||||| |||| ||||||||||||| | ||||||||| |||||||
Sbjct: 64 aatgaatctaggt--atatgcgtgtctagattcattaacatttatatgaatgtggacaat 121
Query: 128 gctataaagtcttacattgtgaaacgga 155
|||| ||||||||||||| |||||||||
Sbjct: 122 gctagaaagtcttacattatgaaacgga 149
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||||| | ||| |||| ||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaacg 14
Query: 154 gatggagtact 164
|| ||||||||
Sbjct: 13 gagggagtact 3
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||||||||||||||||| |||||| || | || | || |||| || ||||||||
Sbjct: 156 tacttcctccgtttcacaatgtaagacttttta-gcattgtccacatttatttagatatt 98
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||||||||| || | ||| | ||||||||||||| ||||||| || |||||||
Sbjct: 97 aatgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaat 40
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
| || ||||||||||||| ||||||||| ||||||
Sbjct: 39 ggtagaaagtcttacattatgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 57 atatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatga 116
|||||||| |||||||||||||| |||| | | | |||||||||||| |||| || |
Sbjct: 51 atatagatgttaatgaatctagaaacatacatatatctagattcattaatatctaaataa 110
Query: 117 atatggacaacgctataaagtcttacattgtgaaacgga 155
|| ||||||| |||| |||||||||||||||||||||||
Sbjct: 111 atgtggacaatgctaaaaagtcttacattgtgaaacgga 149
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 131/157 (83%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||||||||| ||||||| || |||| || ||||||| ||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttata-gtattacctccattcatttagatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||| | || | | ||| |||||| |||||| |||| ||| || ||| |||
Sbjct: 64 aatgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagtact 164
|||| ||||||||||||||||||||||| ||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggagtact 160
Score = 71.9 bits (36), Expect = 3e-12
Identities = 122/148 (82%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||||||||||||||||| ||||||||| | || |||| ||| ||| ||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttcta-gcattgcccacatacatttagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||| |||||||| ||| | ||| ||||||||||||| |||| |||||| | ||
Sbjct: 99 aataaatctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaat 40
Query: 128 gctataaagtcttacattgtgaaacgga 155
|||||||||||||||||||||||||||
Sbjct: 39 actataaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 127/150 (84%), Gaps = 6/150 (4%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||| |||||||| |||||| || ||| ||| ||||||| ||||| ||
Sbjct: 5 tacttcctccgttttacaatgtaagactttttaa-tattgcctacattcatttagatgtt 63
Query: 68 aatgaatctagattcatatgt--gtgtgtagattcattaacgtctatatgaatatggaca 125
||||||| |||| ||||||| |||| ||||||||||||| |||||||| || || ||
Sbjct: 64 aatgaatataga--catatgtacgtgtttagattcattaacatctatatgtatgtgagca 121
Query: 126 acgctataaagtcttacattgtgaaacgga 155
| |||| |||||||||||||||||||||||
Sbjct: 122 atgctagaaagtcttacattgtgaaacgga 151
Score = 63.9 bits (32), Expect = 7e-10
Identities = 121/148 (81%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgt-agactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||||||||| |||||||||| | || || | ||| ||||||||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttcta-gcattgctcacatacatatagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||| | | || | ||| || |||||||||| |||| |||||| | | |||
Sbjct: 99 aatgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaat 40
Query: 128 gctataaagtcttacattgtgaaacgga 155
|| ||||||||||||||| |||||||
Sbjct: 39 attaaaaagtcttacattgtaaaacgga 12
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| ||||||||||| ||||||| |||| ||||||||||||| ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaaca 123
Query: 154 gatggagtactt 165
|| |||||||||
Sbjct: 124 gagggagtactt 135
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaa 151
||||||||||| ||||||| |||| ||||||||||||| |||||
Sbjct: 59 tctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctaga 79
||||||||||||| ||||||||||||||
Sbjct: 89 cattcatatagatgttaatgaatctaga 62
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 88 tgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgt 147
||||| ||||||||||||| ||||||||||| ||| ||| |||| ||||||||||||| |
Sbjct: 66 tgtgtatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattat 125
Query: 148 gaaacggatggagtac 163
|||||||| |||||||
Sbjct: 126 gaaacggagggagtac 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 62/70 (88%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| ||||||||||| |||||| ||||||||| | || |||| ||||||||||||| ||
Sbjct: 140 tactccctccgtttcataatgtaagactttcta-gcattgcccacattcatatagatgtt 82
Query: 68 aatgaatcta 77
||||||||||
Sbjct: 81 aatgaatcta 72
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 100 cattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||| ||||||||||| | | ||| |||| ||||||||||||| |||||||||
Sbjct: 67 cattaacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaacgga 12
Score = 44.1 bits (22), Expect = 6e-04
Identities = 66/78 (84%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||||| ||||||||| |||||| ||||||||| | || ||| ||||||||||||| |
Sbjct: 4 atacttcttccgtttcataatgtaagactttcta-gcattgcctacattcatatagatgt 62
Query: 67 taatgaatctagattcat 84
||||| | |||||||||
Sbjct: 63 taatgtgtatagattcat 80
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||| | | || ||||||||| | || |||| ||||||||||||| |
Sbjct: 158 tacttcctccgtttcatattataagactttcta-gcattgcccacattcatatagatgct 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| |||| ||||| ||| ||||||||| ||||||||| | ||| |||
Sbjct: 99 aatgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaat 40
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| ||||||||| | | ||||||||| ||||||
Sbjct: 39 gctagaaagtcttataatatgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 123/150 (82%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 7 catacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagata 65
|||||| ||||||||||| | | || ||||||||| | || |||| || ||||||||||
Sbjct: 3 catactccctccgtttcatattataagactttcta-gcattgcccacaatcatatagatg 61
Query: 66 ttaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggaca 125
|||||||| ||| | ||||| | ||| ||||||||||| | ||||||||||| ||| ||
Sbjct: 62 ttaatgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggca 121
Query: 126 acgctataaagtcttacattgtgaaacgga 155
| |||| ||||||||| | | |||||||||
Sbjct: 122 atgctagaaagtcttataatatgaaacgga 151
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||||||||||||||||||| |||| | ||| ||||||||||||| || |
Sbjct: 47 cattcatattgatattaatgaatctagatagatatatatgtctagattcattaacatcaa 106
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||| |||| || || || | |||||||||||||||||| ||||||
Sbjct: 107 tatgaatgtggaaaatattagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||||| | ||||||||||||||| |||| ||| ||||||||||||| |||
Sbjct: 48 cattcatataggtgttaatgaatctagatatatatagatgtctagattcattaacaccta 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||| |||| || |||| || | |||||||||||||||||| ||||||
Sbjct: 108 tatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| ||||||||||||||| || | | ||| ||||||||||||| ||||
Sbjct: 115 cattcatatggatgttaatgaatctagatatatgtctatgtctagattcattaacatcta 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||||| | ||| |||| || | |||||||| ||||||||| ||||||
Sbjct: 55 tatgaatataggcaatgctagaatgacttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctaga 79
|||||||||||| ||||||||||||||
Sbjct: 49 attcatatagatgttaatgaatctaga 75
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 85.7 bits (43), Expect = 2e-16
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| |||||||||| || ||||||||||||||| |||| |||| |||||||||||||
Sbjct: 19 gcccacattcatatatatgttaatgaatctagatatatatatgtgcctagattcattaac 78
Query: 107 gtctatatgaatatggacaacgctataaagtctta 141
||||||||||| ||| ||| |||| |||||||||
Sbjct: 79 atctatatgaatgtgggcaatgctagaaagtctta 113
Score = 69.9 bits (35), Expect = 1e-11
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| ||||||||||||| ||||||||||||| ||||| | | | |||||||||||||
Sbjct: 96 gcccacattcatatagatgttaatgaatctaggcacatatatatatctagattcattaac 37
Query: 107 gtctatatgaatatggacaacgctataaagtctta 141
| ||||||||| ||| ||| |||| |||||||||
Sbjct: 36 atatatatgaatgtgggcaatgctagaaagtctta 2
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| || ||||||||||||||| |||| | ||| ||||||||||||| || |
Sbjct: 115 cattcatattaatgttaatgaatctagatagatatatatgtctagattcattaacatcaa 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||| ||| || ||||||| | |||||||||||||||||| ||||||
Sbjct: 55 tatgaatgtgggtaatgctataatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 84/104 (80%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| |||||||||||||| |||| | | | ||||||||||||| | |
Sbjct: 48 cattcatattgatgttaatgaatctagacatatatatctatctagattcattaacattaa 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||| ||| || |||| || | |||| |||||||||||||
Sbjct: 108 tatgaatgtgggaaatgctaaaatgacttatattgtgaaacgga 151
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 85.7 bits (43), Expect = 2e-16
Identities = 86/100 (86%), Gaps = 4/100 (4%)
Strand = Plus / Minus
Query: 56 catatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatg 115
|||| |||| |||||||||||| || ||||||| | |||||||||||| |||| |||
Sbjct: 107 cataaagatgttaatgaatctaaatacatatgtct----agattcattaacatctaaatg 52
Query: 116 aatatggacaacgctataaagtcttacattgtgaaacgga 155
||| ||| |||||||| |||||||||||||||||||||||
Sbjct: 51 aatgtgggcaacgctacaaagtcttacattgtgaaacgga 12
Score = 75.8 bits (38), Expect = 2e-13
Identities = 130/156 (83%), Gaps = 6/156 (3%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
|||||||||||||||||||||||| |||||| || | | |||| ||||||| ||||| |
Sbjct: 4 atacttcctccgtttcacaatgtaagactttgta-gcgttgcccacattcatttagatgt 62
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
||||||||||||| |||| ||| | ||||||||||||| ||| |||| || ||| |
Sbjct: 63 taatgaatctaga--cata--tgtatttagattcattaacatctttatgtatgtgggtag 118
Query: 127 cgctataaagtcttacattgtgaaacggatggagta 162
|||| ||||||||| ||||||||||||| ||||||
Sbjct: 119 tgctaaaaagtcttatattgtgaaacggagggagta 154
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| ||||||| ||||||||||| |||| ||||||||||||| |||||||
Sbjct: 69 tagattcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaacg 128
Query: 154 ga 155
||
Sbjct: 129 ga 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 103 taacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
|||| ||||||| ||| ||| ||| |||| ||||||||||||| |||||||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 131/158 (82%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||| |||||| | | ||||| | || |||| ||| |||||||| ||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattcta-gcattgcccacatatatatagatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||| ||||| | |||||||| ||||||||||||| ||||||||||| | | ||
Sbjct: 99 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaat 40
Query: 128 gctataaagtcttacattgtgaaacggatggagtactt 165
|||| || | |||||||| ||||||||| |||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagtactt 2
Score = 56.0 bits (28), Expect = 2e-07
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||||||| |||||||||||||| || || | | | || |||||||||| ||||
Sbjct: 48 cattcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatcta 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||| || ||| ||| |||| || | |||||||| |||||||||
Sbjct: 108 tatatatgtgggcaatgctagaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 86 tgtgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacatt 145
||||||| || |||||||||| ||||||||||| ||| ||| |||| |||||||||||||
Sbjct: 81 tgtgtgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacatt 22
Query: 146 gtgaaacggatggagta 162
||||||||| ||||||
Sbjct: 21 atgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtac 163
||||||||||| ||| ||| |||| ||||||||||||| ||||||||| |||||||
Sbjct: 88 tctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtac 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||| ||||||||||| |||||| ||||||||| | || |||| ||||||||||||| |
Sbjct: 4 atactccctccgtttcataatgtaagactttcta-gcattgcccacattcatatagatgt 62
Query: 67 taatgaatctaga 79
|||||||| ||||
Sbjct: 63 taatgaatttaga 75
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| |||||||||| || | |||||||||||| |||| ||||| |||||||||| ||
Sbjct: 43 gcccacattcatatatatgtcaatgaatctagacatatatatgtgtttagattcattgac 102
Query: 107 gtctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||||||| |||||||| ||| ||||||||| | | ||||||||| ||||||
Sbjct: 103 atctatatgaagatggacaattctagaaagtcttataatatgaaacggagggagta 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 91/112 (81%)
Strand = Plus / Minus
Query: 54 ttcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctata 113
||||||||||| | |||||||||| | ||||| | ||| |||||||||| || | ||||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatata 54
Query: 114 tgaatatggacaacgctataaagtcttacattgtgaaacggatggagtactt 165
||||| ||| ||| | || ||||||||| | | ||||||||| | |||||||
Sbjct: 53 tgaatgtgggcaatgttagaaagtcttataatatgaaacggaggaagtactt 2
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 88 tgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgt 147
||||| ||||||| ||||| ||||||||||| ||||||| |||| ||||||||||||| |
Sbjct: 34 tgtgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattat 93
Query: 148 gaaacgga 155
||||||||
Sbjct: 94 gaaacgga 101
Score = 46.1 bits (23), Expect = 2e-04
Identities = 58/67 (86%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 14 cctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatattaatga 72
||||||||||| |||||| ||||||||| | || | || ||||||||||||| |||| ||
Sbjct: 103 cctccgtttcataatgtaagactttcta-gcattgtccacattcatatagatgttaacga 45
Query: 73 atctaga 79
|||||||
Sbjct: 44 atctaga 38
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| |||||||||||||| | |||| | || ||||||||||| | ||||
Sbjct: 115 cattcatattgatgttaatgaatctagacttatatatatgcctagattcattagcatcta 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||| ||||||| |||| || | | ||||||||||||||||
Sbjct: 55 tatgaatgtggacaatgctagaatgacatacattgtgaaacgga 12
Score = 77.8 bits (39), Expect = 4e-14
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||||||||||||||||| | | ||||| | || | || ||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattcta-gcattgtccacattcatatagatgct 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||||||| |||| | || ||||||||||||| || |||||||| |||| ||
Sbjct: 64 aatgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| || | |||||||||||||||||| ||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| |||||||| || ||| ||| |||| ||||||||||||| |||||||
Sbjct: 79 tagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaacg 138
Query: 154 gatggagtactt 165
|| |||||||||
Sbjct: 139 gagggagtactt 150
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 89 gtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtg 148
|||| ||||||||||||| |||| ||||| || ||| |||| ||||||||||||||||
Sbjct: 78 gtgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtg 19
Query: 149 aaacgga 155
|||||||
Sbjct: 18 aaacgga 12
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 79.8 bits (40), Expect = 1e-14
Identities = 100/119 (84%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatctagattca--tatgtgtgtgtagattcatta 104
|||| ||||||||||||| |||||||||||| | || ||||||||| |||||||||||
Sbjct: 122 gcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcatta 63
Query: 105 acgtctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtac 163
|| ||||||||||| ||| ||| ||| ||||||||| | | |||||| || |||||||
Sbjct: 62 acatctatatgaatgtgggcaattctagaaagtcttataatatgaaacagagggagtac 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 47 gcccgcattcatatagatattaatgaatctagattca--tatgtgtgtgtagattcatta 104
|||| ||||||||||||| |||||||||||| | || ||||||||| |||||||||||
Sbjct: 43 gcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcatta 102
Query: 105 acgtctatatgaat 118
|| |||||||||||
Sbjct: 103 acatctatatgaat 116
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| ||||||||||||||| || | | | | ||||||||||||| ||||
Sbjct: 48 cattcatatggatgttaatgaatctagatatatgtctatatctagattcattaacatcta 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||||| | ||| |||| || | |||||||| ||||||||| ||||||
Sbjct: 108 tatgaatataggcaatgctagaatgacttacattatgaaacggagggagta 158
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 53 attcatatagatattaatgaatctagat 80
|||||||||||| |||||||||||||||
Sbjct: 114 attcatatagatgttaatgaatctagat 87
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||| |||||| |||||| || | || ||| ||||||||||||| |
Sbjct: 5 tacttcctccgtttcataatgtaagactttata-gcattacccacattcatatagatgct 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||| |||||| || ||| ||| ||||||||||| | ||||||||||| ||| |||
Sbjct: 64 aataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
| || ||||||||||||||||||||||| ||||||
Sbjct: 124 gttagaaagtcttacattgtgaaacggagggagta 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 125/150 (83%), Gaps = 4/150 (2%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||| |||||||||||||||||| ||||||||| || |||| |||||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctaac-attgcccacattcatatagatgc 101
Query: 67 taatgaatctagat-tcatatgtgtgtgtagattcattaacgtctatatgaatatggaca 125
||||||||||||| | || | | | | |||||| |||| | ||||||||||| ||| |
Sbjct: 100 taatgaatctagacattat-tatatatatagatttattagcatctatatgaatgtgggta 42
Query: 126 acgctataaagtcttacattgtgaaacgga 155
| |||||||||||||||||| |||||||||
Sbjct: 41 atgctataaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 77.8 bits (39), Expect = 4e-14
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| ||||||||||||| ||||||||||||| |||||| || |||||||||||||
Sbjct: 96 gcccacattcatatagatgttaatgaatctaggcatatatgtatgcctagattcattaac 37
Query: 107 gtctatatgaatatggacaacgctataaagtctta 141
| ||||||||||||| ||| |||| |||||||||
Sbjct: 36 atatatatgaatatgggcaatgctagaaagtctta 2
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtctta 141
||||||||||||| ||||||||||| ||| ||| |||| |||||||||
Sbjct: 66 tagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| |||||||||||||||| || |||| | ||| ||||||||||||| ||
Sbjct: 115 cattcatattgatattaatgaatctaaatagatatatatgtctagattcattaacatcac 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||| ||| || |||| || | |||||||||||||||||| ||||||
Sbjct: 55 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 90/111 (81%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
|||||||| ||| |||||||||||||| |||| | | | |||||||||||| || |
Sbjct: 48 cattcatagtgatgttaatgaatctagacatatatatctatttagattcattaatatcaa 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||| |||| || | || || | |||||||||||||||||| ||||||
Sbjct: 108 tatgaatgtggaaaatgttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 131/159 (82%), Gaps = 2/159 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||||| |||| ||| || ||||||||| | || |||| | |||| |||||| |
Sbjct: 158 tacttcctccgcttcataatataagactttcta-gcattgcccacgttcacatagatgtc 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||||| ||| | |||| ||||| ||||||| ||||||||||| | |||
Sbjct: 99 aatgaatctagacacatgtaagtgtatagatccattaacatctatatgaatgtaaacagt 40
Query: 128 gctataaagtcttacattgtgaaacggatggagtacttt 166
|||| ||||||||||||| ||||||||| ||||||||||
Sbjct: 39 gctagaaagtcttacattatgaaacggagggagtacttt 1
Score = 52.0 bits (26), Expect = 3e-06
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||||||| |||||| ||||| | | || ||||| |||||||||| || ||||
Sbjct: 48 cattcatatagatgttaatggatctatacacttacatgtgtctagattcattgacatcta 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtactt 165
| |||| ||| ||| |||| ||||||||| ||| |||| |||| | |||||||
Sbjct: 108 tgtgaacgtgggcaatgctagaaagtcttatattatgaagcggaggaagtactt 161
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 59 atagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaat 118
|||||| |||||||||||||| |||| ||||| ||||||||||||| |||| ||||||
Sbjct: 108 atagatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaat 49
Query: 119 atggacaacgctataaagtcttacattgtgaaacggatggagtactt 165
||| || |||| |||||||| |||| ||||||||| | |||||||
Sbjct: 48 gtgggtaatgctagaaagtcttgcattatgaaacggaggaagtactt 2
Score = 77.8 bits (39), Expect = 4e-14
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||| |||| | ||||||||| | || ||| ||||||| ||||| ||
Sbjct: 5 tacttcctccgtttcataatgcaagactttcta-gcattacccacattcatttagatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
|||||||||| | ||||| | ||| ||||||||||||| ||||| | | || | |||
Sbjct: 64 aatgaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
| || ||||||||||||||||||||||| ||||||
Sbjct: 124 gttagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
|||||||||||| ||||||||||| | ||||| | ||| || |||||||| | |||||
Sbjct: 49 attcatatagatgctaatgaatctatacgcatatatatgtttaaattcattagcatctat 108
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||| |||| || |||| || | |||||||||||||||||| ||||||
Sbjct: 109 atgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||||||| |||||||| || | |||| || || ||||||||||| | ||||
Sbjct: 115 cattcatatagatgctaatgaatttaaacatatatatgcgtatagattcattagcatcta 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||||| || || | || || | |||||||||||||||||| ||||||
Sbjct: 55 tatgaatatagaaaatgttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| |||| |||||| |||| || |||| |||||||||||||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
Score = 58.0 bits (29), Expect = 4e-08
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgt-agactttctacgtatcgcccgcattcatatagatat 66
||||||||||||||||||||||| |||||||||| | || || ||||||| ||||| |
Sbjct: 4 atacttcctccgtttcacaatgtaagactttcta-gcattatccacattcatttagatgt 62
Query: 67 taatgaatctaga 79
|||||||||||||
Sbjct: 63 taatgaatctaga 75
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
|||||||||| || |||||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 24 cattcatatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacatcta 83
Query: 112 tatgaatatggacaacgctataaagtctta 141
||||||| ||| ||| |||| |||||||||
Sbjct: 84 tatgaatgtgggcaatgctagaaagtctta 113
Score = 69.9 bits (35), Expect = 1e-11
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| ||||||||||||| ||||||||||||| || || ||| |||||||||||||
Sbjct: 96 gcccacattcatatagatgttaatgaatctaggcacacatacatgtctagattcattaac 37
Query: 107 gtctatatgaatatggacaacgctataaagtctta 141
| ||||||||| ||||||| |||| |||||||||
Sbjct: 36 atatatatgaatgtggacaatgctagaaagtctta 2
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
|||||| |||||| ||||||||||| ||| ||| |||| |||||||||||||||||||||
Sbjct: 66 tagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacg 125
Query: 154 ga 155
||
Sbjct: 126 ga 127
Score = 71.9 bits (36), Expect = 3e-12
Identities = 65/72 (90%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgt-agactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||||||||| |||||||||| | || |||| ||||||||||||| ||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttcta-gcattgcccacattcatatagatgtt 76
Query: 68 aatgaatctaga 79
||| ||||||||
Sbjct: 75 aataaatctaga 64
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtac 163
||||||||||| || |||| |||| ||||||||||| | ||||||||| |||||||
Sbjct: 59 tctatatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagtac 4
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 73.8 bits (37), Expect = 7e-13
Identities = 130/157 (82%), Gaps = 3/157 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||||||||||||||||| | | ||||| | || ||| ||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattcta-gcatttcccacattcatattgatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||||||| |||| | ||| ||||||||||||| || |||||||| ||| ||
Sbjct: 64 aatgaatctagca-catacatatgtttagattcattaacatcaatatgaatgtgggaaat 122
Query: 128 gctataaagtcttacattgtgaaacggatggagtact 164
|||| || | |||||||||||||||||| ||||||||
Sbjct: 123 gctagaatgacttacattgtgaaacggagggagtact 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 89/105 (84%), Gaps = 3/105 (2%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtg-tagattcattaacgtct 110
||||||||| ||| |||||||||||| | ||||||| |||| ||||||||||||| ||
Sbjct: 114 cattcatattgatgttaatgaatctaaa--catatgtatgtgctagattcattaacatca 57
Query: 111 atatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
|||||||| ||| || |||| || | ||||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 86 tgtgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacatt 145
||||||| || |||||||||| ||||||||||| ||| ||| |||| ||||| |||||||
Sbjct: 66 tgtgtgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacatt 125
Query: 146 gtgaaacggatggagta 162
||||||||| ||||||
Sbjct: 126 atgaaacggagggagta 142
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtac 163
||||||||||| ||| ||| |||| ||||||||||||| ||||||||| |||||||
Sbjct: 59 tctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtac 4
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || ||||||||||||| || |||| || | ||||||||||||||||
Sbjct: 77 tagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacg 136
Query: 154 gatggagta 162
|| ||||||
Sbjct: 137 gagggagta 145
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 91/109 (83%)
Strand = Plus / Plus
Query: 56 catatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatg 115
||||||||| ||||||||||||||| | | | ||| ||||||||||| | ||||||||
Sbjct: 52 catatagatgttaatgaatctagatatagacatatgtttagattcattaccatctatatg 111
Query: 116 aatatggacaacgctataaagtcttacattgtgaaacggatggagtact 164
||| ||| ||| |||| || | |||||||| ||||||||| ||||||||
Sbjct: 112 aatgtgggcaatgctaaaatgacttacattatgaaacggagggagtact 160
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| |||||||| |||||| || |||| || | |||||||| |||||||
Sbjct: 73 tagattcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| ||||||||||||||| |||| | ||| |||||||||||| || |
Sbjct: 115 cattcatattgattttaatgaatctagatagatatatatgtctagattcattaatatcaa 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtact 164
||||||| ||| || | || || | |||||||||||||||||| ||||||||
Sbjct: 55 tatgaatgtgggaaatgttagaatgacttacattgtgaaacggagggagtact 3
Score = 61.9 bits (31), Expect = 3e-09
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| |||||||||||||||||| |||| | | | |||||||||||| || |
Sbjct: 48 cattcatattgatattaatgaatctagacatatatatctatctagattcattaaaatcaa 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||| || | || ||| || | |||||||||||||||||| ||||||
Sbjct: 108 tatgaatgtgaaaaatactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
|||||| |||||| ||||||||||| ||||||| |||| ||||||||||||| ||||| |
Sbjct: 73 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaatg 14
Query: 154 gatggagta 162
|| ||||||
Sbjct: 13 gagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| ||||||||||||| ||||||||| ||||||
Sbjct: 90 gctagaaagtcttacattatgaaacggagggagta 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||| ||||| ||||| |||||| ||||||||| | || | || ||||||||||||| |
Sbjct: 4 atactccctccatttcataatgtaagactttcta-gcattgtccacattcatatagatgt 62
Query: 67 taatgaatctagat 80
|||| |||||||||
Sbjct: 63 taataaatctagat 76
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||||| || || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaacg 14
Query: 154 gatggagtacttt 166
|| ||||||||||
Sbjct: 13 gagggagtacttt 1
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 66 ttaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggaca 125
||||||||||||||| |||| | ||| ||||||||||||| | |||||||| |||| |
Sbjct: 62 ttaatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggaga 121
Query: 126 acgctataaagtcttacattgtgaaacggatggagta 162
| |||| || | |||||||||||||||||| ||||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 79 attcatatgtgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtc 138
||||| |||||||| ||||||||||||| ||||||||||| ||| ||| |||| ||||||
Sbjct: 49 attcacatgtgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtc 108
Query: 139 ttacattgtgaaacggatggagtacttt 166
||| | | |||||| || | ||||||||
Sbjct: 109 ttataatatgaaactgaggaagtacttt 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatcta 77
|||| ||||||||||||| ||||||||||||
Sbjct: 94 gcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 87/104 (83%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||||||||||||||||||| |||| | ||| ||||||||||||| || |
Sbjct: 115 cattcatattgatattaatgaatctagatagatatatatgtctagattcattaacatcaa 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||| ||| ||| || || | || | ||||||||||||||||||
Sbjct: 55 tataaatgtgggaaatgcaaaaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
Score = 46.1 bits (23), Expect = 2e-04
Identities = 89/111 (80%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
|||| |||| ||| |||||||||||||| |||| | | | |||||||||||| || |
Sbjct: 48 catttatattgatgttaatgaatctagacatatatatctatctagattcattaatatcaa 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||| ||| || |||| || | |||||||||||| ||||| ||||||
Sbjct: 108 tatgaatgtgggaaatgctagaatgacttacattgtgatacggagggagta 158
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 97 attcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaac 152
||||||||| ||||||||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaac 104
Score = 61.9 bits (31), Expect = 3e-09
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||| ||||||||||||| ||||||||| | | |||| ||||||||||||||||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttcta-gcgttgcccacattcatatagatatt 56
Query: 68 aatgaat 74
|||||||
Sbjct: 55 aatgaat 49
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct: 59 tctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacgga 12
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||||||| ||| ||| |||| ||| ||||||||||||||||||| ||||||
Sbjct: 66 tctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
Score = 50.1 bits (25), Expect = 1e-05
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agactttcta 40
|||||||||||||||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttcta 37
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 88 tgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgt 147
||||| ||||||| ||||| ||||||||||||||| || |||| ||||||||||||| |
Sbjct: 79 tgtgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattat 20
Query: 148 gaaacgga 155
||||||||
Sbjct: 19 gaaacgga 12
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 71.9 bits (36), Expect = 3e-12
Identities = 76/88 (86%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 31 agactttctacgtatcgcccgcattcatatagatattaatgaatctagattcatatgtgt 90
|||||||||| | ||| ||| ||||||||||||| |||||||||||||| ||||| | |
Sbjct: 4 agactttcta-gcatcacccacattcatatagatgttaatgaatctagacacatatatat 62
Query: 91 gtgtagattcattaacgtctatatgaat 118
|| |||||||||| || |||||||||||
Sbjct: 63 gtctagattcatttacatctatatgaat 90
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||||||| | |||||||||||| |||| ||||| ||||||||||||| ||||
Sbjct: 91 cattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatcta 32
Query: 112 tatgaat 118
|||||||
Sbjct: 31 tatgaat 25
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||||||| || |||| || | ||||||||||||||||
Sbjct: 71 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 130
Query: 154 gatggagtact 164
|| ||||||||
Sbjct: 131 gagggagtact 141
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| ||||||||||| ||| ||| |||| |||| |||||||| |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacg 14
Query: 154 gatggagtact 164
|| | ||||||
Sbjct: 13 gaggaagtact 3
Score = 63.9 bits (32), Expect = 7e-10
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||| |||||| | ||||||| | || |||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttcta-gcattgcccacattcatatagatgtt 63
Query: 68 aatgaatctaga 79
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| ||||||||||||| ||||||||| ||||||
Sbjct: 88 gctagaaagtcttacattatgaaacggagggagta 122
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| |||||||||||||||| || |||| | ||| ||||||||||||| | |
Sbjct: 115 cattcatattgatattaatgaatctaaatagatatatatgtctagattcattaacaccaa 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||| ||| ||| || |||| || | |||||||||||||||||| ||||||
Sbjct: 55 tataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 92 tgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaa 151
|||||||||||||| || |||| |||||||| || ||||||| | ||||||||||||||
Sbjct: 76 tgtagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaa 135
Query: 152 cggatggagta 162
|||| ||||||
Sbjct: 136 cggagggagta 146
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| || || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| ||||||||||||||| |||| | ||| |||||||||||| || |
Sbjct: 48 cattcatattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaa 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||| | || || |||| || | |||||||||||||||||| ||||||
Sbjct: 108 catgaatttagaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 54.0 bits (27), Expect = 6e-07
Identities = 90/111 (81%)
Strand = Plus / Minus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
|||||| | |||||||||||||||||| |||| | | | ||||||||||||| || ||
Sbjct: 114 attcatgttgatattaatgaatctagacatatatatctatctagattcattaacatcaat 55
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacggatggagtac 163
|||||| || || | || || | |||||||||||||||||| |||||||
Sbjct: 54 atgaatgtgagaaatggtagaatgacttacattgtgaaacggaaggagtac 4
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||||||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 14
Query: 154 gatggagtact 164
|| ||||||||
Sbjct: 13 gagggagtact 3
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||||||| |||||||||||||| ||| | | | ||||||||| ||| ||||
Sbjct: 48 cattcatatagatgttaatgaatctagacatctatatatatttagattcatcaacatcta 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||| ||| || |||| || | |||||||||||||||||| ||||||
Sbjct: 108 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 127/157 (80%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||| |||||||||||||||||| | | ||||| | || ||| ||||||||||||| |
Sbjct: 159 atactccctccgtttcacaatgtaagtcattcta-gcatttcccacattcatatagatgt 101
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
| ||||||||| || |||| ||| ||||||||||||| ||||||||||| || ||
Sbjct: 100 tgatgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaa 41
Query: 127 cgctataaagtcttacattgtgaaacggatggagtac 163
| || || | |||||| ||||||||||| |||||||
Sbjct: 40 tgataaaatgacttacaatgtgaaacggagggagtac 4
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 127/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||||||||||||||||| | | ||||| ||| ||| ||||||||| ||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaa-tatttcccacattcatattgatgtt 100
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||| |||| |||| | | | ||||||||||||| || |||||||| ||| ||
Sbjct: 99 aatgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaat 40
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| || | |||||||||||||||||| ||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| ||||||||||||||| |||| | ||| || |||||||||| || |
Sbjct: 48 cattcatattgatgttaatgaatctagatagatatatatgtctacattcattaacatcaa 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||| ||| || || || | ||||||||||||||||||
Sbjct: 108 tatgaatgtgggaaatattagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| |||| |||||||||||||| |||| | ||| ||||||||||| | || |
Sbjct: 48 cattcatattgatactaatgaatctagatagatatatatgtctagattcattagcatcaa 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||| ||| || | || || | |||||||||||||||||| ||||||
Sbjct: 108 tatgaatgtggtaaatgttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||||||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 14
Query: 154 gatggagtact 164
|| ||||||||
Sbjct: 13 gagggagtact 3
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||||||| || |||| || | |||||||| |||||||
Sbjct: 72 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacg 131
Query: 154 ga 155
||
Sbjct: 132 ga 133
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcat 84
|||||||| ||| |||||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctagattcat 80
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 53 attcatatagatattaatgaatctagattcat 84
|||||||| ||| |||||||||||||||||||
Sbjct: 96 attcatattgatgttaatgaatctagattcat 65
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||| | ||||||||||||||| || |||| ||||||||| ||| |||||||
Sbjct: 72 tagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaacg 131
Query: 154 gatggagtac 163
|| |||||||
Sbjct: 132 gagggagtac 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcat 84
|||||||||||| |||||||||||||||||||
Sbjct: 49 attcatatagatgttaatgaatctagattcat 80
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaac 152
||||||||||||| |||||||||||||| ||| |||| |||| |||| ||| ||||||
Sbjct: 73 tagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaac 15
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 53 attcatatagatattaatgaatctagattcat 84
|||||||||||| ||||||||||||||||||
Sbjct: 96 attcatatagatgctaatgaatctagattcat 65
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 57 atatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatga 116
|||| ||| ||||||||||||||| |||| | ||| |||||||||||| || ||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 117 atatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|| ||| || ||| || |||||||||||||||||||| ||||||
Sbjct: 113 atgtgggaaatactagaatgtcttacattgtgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||| |||||||||||||||||| ||| ||||| |||| ||| ||||||||| |||||
Sbjct: 159 atactccctccgtttcacaatgtaagacattcta-gtatttcccacattcatattgatat 101
Query: 67 taatgaatctaga 79
|||||||||||||
Sbjct: 100 taatgaatctaga 88
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 67.9 bits (34), Expect = 4e-11
Identities = 129/157 (82%), Gaps = 4/157 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| |||| ||||||||||||| ||||||||| | || ||| ||||||| ||||| ||
Sbjct: 5 tactccctctgtttcacaatgtaagactttcta-gcattacccacattcatttagatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatat--gaatatggaca 125
|||||||||| | || | ||||| ||||||||||||| | ||||| | || || ||
Sbjct: 64 aatgaatctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagca 123
Query: 126 acgctataaagtcttacattgtgaaacggatggagta 162
| |||| ||||||||||||||||||||||| ||||||
Sbjct: 124 atgctaaaaagtcttacattgtgaaacggagggagta 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 88/106 (83%)
Strand = Plus / Minus
Query: 57 atatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatga 116
||||| || |||||||||||| | |||| | ||| ||||||||||||| |||| ||||
Sbjct: 110 atatatatgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatga 51
Query: 117 atatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|| ||| || |||| |||||||||||||||||||| || ||||||
Sbjct: 50 atgtgggtaatgctagaaagtcttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| ||||||||||| ||| ||| |||| ||||||||| | | |||||||
Sbjct: 91 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacg 150
Query: 154 gatggagtac 163
|| |||||||
Sbjct: 151 gagggagtac 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 97/117 (82%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattca-ttaa 105
|||| ||||||||||||| ||||||||||||||| || | |||| |||||| | ||||
Sbjct: 121 gcccacattcatatagatgttaatgaatctagatatatgtaggtgtctagattaatttaa 62
Query: 106 cgtctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
| ||||||||||| ||| || |||| ||||||||| | | ||||||||| ||||||
Sbjct: 61 catctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||||| ||||||||| ||| ||| |||| ||||||||| | | |||||||
Sbjct: 73 tagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 154 gatggagta 162
|| ||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 87/104 (83%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||||||| |||||||||||| | ||||| | ||| | ||||||||||| ||||
Sbjct: 113 cattcatatagatgttaatgaatcta--tgcatatatatgtcttgattcattaacatcta 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
|||||| ||| || |||| || | ||||||||||||||||||
Sbjct: 55 catgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 4e-08
Identities = 92/112 (82%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||| ||||| |||||||||| ||| ||||| | || ||||||||||||| ||||
Sbjct: 48 cattcatgtagatgttaatgaatcaaga--catatatatgcatagattcattaacatcta 105
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtac 163
||||||| || | || |||| || | ||| |||| ||||||||| |||||||
Sbjct: 106 tatgaatgtgaaaaatgctaaaatgacttgcattatgaaacggagggagtac 157
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 128/157 (81%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 catacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagata 65
||||||||||||||||||||||||| | | ||||| | || || ||||| ||| |||
Sbjct: 3 catacttcctccgtttcacaatgtaagtcattcta-gcattttccacattcgtattgatg 61
Query: 66 ttaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggaca 125
||||||| ||||||| |||| | ||| ||||||||||| | || |||||||||| || |
Sbjct: 62 ttaatgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaa 121
Query: 126 acgctataaagtcttacattgtgaaacggatggagta 162
| |||| || | |||| ||||||||||||| ||||||
Sbjct: 122 atgctagaatgacttatattgtgaaacggagggagta 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 83/103 (80%)
Strand = Plus / Minus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
|||||||| ||| ||||||||||||| |||| | | | |||| |||||||| || ||
Sbjct: 114 attcatattgatgctaatgaatctagacatatatatctatctagagtcattaacatcaat 55
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacgga 155
| |||| |||| || |||| || | ||||||||||||||||||
Sbjct: 54 acgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| ||||||||||| ||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 154 gatggagta 162
|| ||||||
Sbjct: 13 gagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||||||| ||| || |||| || | |||||||||||||||||| ||||||
Sbjct: 70 tctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatcta 77
||||||||||||| ||||||||||||
Sbjct: 48 cattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 86 tgtgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacatt 145
||||||| ||||||||||||| ||||||||||| ||| ||| |||| ||||||||| | |
Sbjct: 56 tgtgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataat 115
Query: 146 gtgaaacggatggagtacttt 166
|||||| || | ||||||||
Sbjct: 116 atgaaactgaggaagtacttt 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatcta 77
|||| ||||||||||||| ||||||||||||
Sbjct: 94 gcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||||| ||||||||| ||| ||| |||| ||||||||| | | |||||||
Sbjct: 60 tagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 119
Query: 154 gatggagta 162
|| ||||||
Sbjct: 120 gagggagta 128
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| |||||||| || ||| || |||| ||||||||| |||||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 154 gatggagta 162
|| ||||||
Sbjct: 128 gagggagta 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| ||||||||||||||| || ||||||||| | || ||| ||| ||||||||| ||
Sbjct: 136 tactccctccgtttcacaatataagactttcta-gcattacccacatacatatagatgtt 78
Query: 68 aatgaatcta 77
||||||||||
Sbjct: 77 aatgaatcta 68
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| |||||||| || ||| || |||| ||||||||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 154 gatggagta 162
|| ||||||
Sbjct: 13 gagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
|||| ||||||||||||||| || ||||||||| | || ||| ||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatataagactttcta-gcattacccacatacatatagatgtt 63
Query: 68 aatgaatcta 77
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 65.9 bits (33), Expect = 2e-10
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 66 ttaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggaca 125
||||||||||||||| |||| | ||| ||||||||||||| || ||||||| ||| |
Sbjct: 66 ttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgggaa 125
Query: 126 acgctataaagtcttacattgtgaaacggatggagta 162
| |||| || | |||||||||||||||||| ||||||
Sbjct: 126 atgctagaatgacttacattgtgaaacggagggagta 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| |||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
Query: 154 gatggagta 162
|| ||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 93/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| ||||||||| |||| ||||| | ||| ||||||||||||| || |
Sbjct: 48 cattcatattgatgttaatgaatgtaga--catatatatgtctagattcattaacatcaa 105
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtac 163
||||||| ||| || |||| || | ||||||||||| |||||| |||||||
Sbjct: 106 tatgaatgtgggaaatgctagaatgacttacattgtggaacggagggagtac 157
Score = 58.0 bits (29), Expect = 4e-08
Identities = 86/104 (82%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| |||||||||||||| ||||| | ||| || |||||||||| || |
Sbjct: 113 cattcatattgatgttaatgaatctaga--catatatatgtctacattcattaacatcaa 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||| | || || |||| || | ||||||||||| ||||||
Sbjct: 55 tatgaatgtagaaaatgctagaatgacttacattgtggaacgga 12
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 122/149 (81%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||| |||||||||||||||||| | | ||||| |||| ||| ||||||||| | | |
Sbjct: 159 atactccctccgtttcacaatgtaagtcattcta-gtatttcccacattcatattgttgt 101
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
||||||||||||| |||| | | | ||||||||||||| || ||||| || |||| ||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaa 41
Query: 127 cgctataaagtcttacattgtgaaacgga 155
|||| || | ||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacgga 12
Score = 61.9 bits (31), Expect = 3e-09
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 56 catatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatg 115
||||| ||| ||||||||||||||| |||| | ||| ||||||||||||| | |||||
Sbjct: 52 catattgatgttaatgaatctagatagatatatatgtctagattcattaacaacaatatg 111
Query: 116 aatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||| ||| || ||| || | |||||||||||||||||| ||||||
Sbjct: 112 aatgtgggaaatactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 107 gtctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||||| ||||||||| | |||| ||||||||||||| ||||||||| ||||||
Sbjct: 60 gtctatataaatatggacgatgctaaaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||||||||||||||||||| |||| | | | ||||||||||||| | |
Sbjct: 115 cattcatattgatattaatgaatctagatatatatatttatctagattcattaacattaa 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||| |||| || | || || | |||| |||||||||||||
Sbjct: 55 tatgaatgtggaaaaagttagaatgacttatattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 91/112 (81%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| || ||||||||||||||| |||| | | | |||||||||||| || |
Sbjct: 48 cattcatattaatgttaatgaatctagataaatatatatatctagattcattaatatcaa 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtac 163
||||||| ||| || |||| || | |||| ||||||||||||| |||||||
Sbjct: 108 tatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtac 159
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 111 atatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||||| ||| ||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 75 atatgaatgtgggcaatgctagaaagtcttacattgtgaaacggatgaagta 126
Score = 58.0 bits (29), Expect = 4e-08
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgt-agactttctacgtatcgcccgcattcatatagatat 66
||||||| ||||||||||||||| |||||||||| | || |||| ||||||||| ||||
Sbjct: 127 atacttcatccgtttcacaatgtaagactttcta-gcattgcccacattcatatggatac 69
Query: 67 taatgaatctaga 79
|||||||| ||||
Sbjct: 68 taatgaatttaga 56
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 88 tgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgt 147
||||| || |||||||||| |||||||| ||||| ||| |||| || ||||||||||||
Sbjct: 63 tgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgt 122
Query: 148 gaaacgga 155
||||||||
Sbjct: 123 gaaacgga 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgta 115
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 107 gtctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||||| ||||||||| | |||| ||||||||| ||||||||||||| ||||||
Sbjct: 60 gtctatataaatatggacgatgctaaaaagtcttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||||||||||| ||| |||| ||||||||||||| |||||||||
Sbjct: 59 tctatatgaatatgggcaatgctagaaagtcttacattatgaaacgga 12
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| ||||||||||||||||||||||| ||||||
Sbjct: 64 gctagaaagtcttacattgtgaaacggagggagta 98
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 88 tgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgt 147
||||| || |||||||||| |||||||| ||||| ||| |||| || ||||||||||||
Sbjct: 79 tgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgt 20
Query: 148 gaaacgga 155
||||||||
Sbjct: 19 gaaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| | ||||||||||||| || |||| || | ||||||||||||||||
Sbjct: 66 tagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaacg 125
Query: 154 gatggagtactt 165
|| | |||||||
Sbjct: 126 gaggaagtactt 137
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgta 112
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 61.9 bits (31), Expect = 3e-09
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
|||| |||| ||| ||||| |||||| || |||| | ||| ||||||||||||| || |
Sbjct: 115 catttatattgatgttaataaatctatatagatatatatgtctagattcattaacatcaa 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||||||| || ||| || | |||||||||||||||||| ||||||
Sbjct: 55 tatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 92 tgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaa 151
|||||||||||||| || |||| |||||||| || |||| || | ||||||||||||||
Sbjct: 76 tgtagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaa 135
Query: 152 cggatggagta 162
|||| ||||||
Sbjct: 136 cggagggagta 146
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| || || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 66 ttaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggaca 125
||||||||||||||| |||| | ||| |||||||||||| || |||||||| ||| |
Sbjct: 101 ttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaa 42
Query: 126 acgctataaagtcttacattgtgaaacggatggagtact 164
| | || || | |||||||||||||||||| ||||||||
Sbjct: 41 atgatagaatgacttacattgtgaaacggagggagtact 3
Score = 56.0 bits (28), Expect = 2e-07
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| |||||||||||||||||| |||| | | | ||||||||||||| ||
Sbjct: 48 cattcatattgatattaatgaatctagacatatatatctatctagattcattaactaata 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||| || || |||| || | ||||||||||||||||||
Sbjct: 108 tatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 61.9 bits (31), Expect = 3e-09
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| ||||||||||||| |||||||||||| ||||||||| ||||||||||| |
Sbjct: 99 gcccacattcatatagatgcaaatgaatctagacatatatgtgtgcctagattcattagc 40
Query: 107 gtctatatgaatatggacaacgctataaagtcttacatt 145
| |||||||| ||| ||| |||| |||||||||||||
Sbjct: 39 atagatatgaatgtgggcaatgctagaaagtcttacatt 1
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| |||||||| ||| ||| | |||| | ||| ||||||||||||| || |
Sbjct: 48 cattcatatttatattaataaatttagctaaatatatatgtctagattcattaacatcaa 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||| ||| || |||| || | |||||||||||||||||| ||||||
Sbjct: 108 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 111 atatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||||| |||| || ||||||| | |||||||||||||||||| ||||||
Sbjct: 56 atatgaatgtggaaaatgctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 97 attcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
|||||||||| || ||||||||||||| || |||| || | ||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| ||||||||||||||| |||| | ||| ||||||||||||| || |
Sbjct: 22 cattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatcaa 81
Query: 112 tatgaat 118
|||||||
Sbjct: 82 tatgaat 88
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| |||||||||||||| |||| | | | ||||||||||||| || |
Sbjct: 89 cattcatattgatgttaatgaatctagacatatatatctatctagattcattaacatcaa 30
Query: 112 tatgaat 118
|||||||
Sbjct: 29 tatgaat 23
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 126/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatatt 67
||||||||||||||||||||||| | | ||||| | || ||| |||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattcta-gcattacccatattcatatggatgtt 63
Query: 68 aatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaac 127
||||||||||| | |||| | ||| ||||||||||||| | |||||||| || ||
Sbjct: 64 aatgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaat 123
Query: 128 gctataaagtcttacattgtgaaacggatggagta 162
|||| || | |||||||||||||||||| ||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||||||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 99 tcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacggatgg 158
|||||||| || |||||||| |||| || |||| || | |||||||||||||||||| ||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 159 agtactt 165
|||||||
Sbjct: 8 agtactt 2
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 61.9 bits (31), Expect = 3e-09
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
|||| |||| ||| ||||| |||||| || |||| | ||| ||||||||||||| || |
Sbjct: 46 catttatattgatgttaataaatctatatagatatatatgtctagattcattaacatcaa 105
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||||||| || ||| || | |||||||||||||||||| ||||||
Sbjct: 106 tatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||||||||||| ||| |||| ||||||||||||||| ||||||| ||||||
Sbjct: 54 tctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| |||| || |||| || | |||| |||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 154 gatggagtac 163
|| |||||||
Sbjct: 132 gagggagtac 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
|||||||| |||| |||| |||||| ||| ||| |||| |||||||||||||||||||||
Sbjct: 72 tagattcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattgtgaaacg 130
Query: 154 ga 155
||
Sbjct: 131 ga 132
Score = 52.0 bits (26), Expect = 3e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgt-agactttcta 40
||||||||||||||||||||||| ||||||||||
Sbjct: 140 atacttcctccgtttcacaatgtaagactttcta 107
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
|||||||||||||||| |||||||| ||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| ||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 154 gatggagtac 163
|| |||||||
Sbjct: 13 gagggagtac 4
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 60.0 bits (30), Expect = 1e-08
Identities = 81/97 (83%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 66 ttaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggaca 125
||||||||||||||| |||| ||| | |||||||||||| || |||||||||||| |
Sbjct: 55 ttaatgaatctagatagatatatgtct--agattcattaacatcaatatgaatatgggaa 112
Query: 126 acgctataaagtcttacattgtgaaacggatggagta 162
| |||| || | |||| ||||||||||||| ||||||
Sbjct: 113 atgctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
|||||||| ||| ||||||||||||||| |||| ||| || |||||||||| || ||
Sbjct: 49 attcatattgatgttaatgaatctagatagatatagatgtctatattcattaacatcaat 108
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||| ||| | |||| || | |||||||||||||||||| ||||||
Sbjct: 109 atgaatgcggaatatgctagaatgacttacattgtgaaacggagggagta 158
Score = 54.0 bits (27), Expect = 6e-07
Identities = 87/107 (81%)
Strand = Plus / Minus
Query: 49 ccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgt 108
|||||||||||| ||| ||||||||| |||| ||| | | | ||||||||||||| |
Sbjct: 118 ccgcattcatattgatgttaatgaatatagacatctatatctatctagattcattaacat 59
Query: 109 ctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
| |||||||||| | || |||| || | ||||||||||||||||||
Sbjct: 58 caatatgaatataggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| ||||||||||| ||| ||| |||| ||||||||| | | |||||||
Sbjct: 58 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 117
Query: 154 ga 155
||
Sbjct: 118 ga 119
Score = 58.0 bits (29), Expect = 4e-08
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||||||||||||||| | | || ||||||||| | || |||| ||||||||||||| |
Sbjct: 127 atacttcctccgtttcatattataagactttcta-gcattgcccacattcatatagatgt 69
Query: 67 taatgaatctaga 79
|||||||||||||
Sbjct: 68 taatgaatctaga 56
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
|||||| |||||| ||||||||||| ||||||| |||| || |||||||| |||||||
Sbjct: 69 tagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaacg 128
Query: 154 gatggagta 162
|| ||||||
Sbjct: 129 gagggagta 137
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 95 agattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacgg 154
|||||||||||| |||| || ||| ||||||| ||| |||| |||||||||||||||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacgg 110
Query: 155 a 155
|
Sbjct: 111 a 111
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 120 tggacaacgctataaagtcttacattgtgaaacggatggagtac 163
||||||| |||| |||| |||||||||||||||||| |||||||
Sbjct: 47 tggacaatgctagaaagccttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||| ||||||| || |||||||| |||| || |||| || | ||||||||||||||||
Sbjct: 73 tagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
Query: 154 gatggagta 162
|| ||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| ||||| | || ||| ||| |||| ||| |||||||||||||||||
Sbjct: 73 tagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacg 14
Query: 154 gatggagta 162
|| ||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| ||| || |||| || | ||||||||||||||||
Sbjct: 81 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 140
Query: 154 gatggagta 162
|| ||||||
Sbjct: 141 gagggagta 149
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| ||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 110 tatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||||||||||| || |||| || | |||||||||||||||||| ||||||
Sbjct: 78 tatatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 4e-08
Identities = 95/116 (81%), Gaps = 2/116 (1%)
Strand = Plus / Plus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| ||||||||||||| ||||||||||| || ||||| |||| |||||||||||
Sbjct: 43 gcccacattcatatagatgttaatgaatctgga--catatatgtggctagattcattagt 100
Query: 107 gtctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||| |||| ||| ||| ||| || | |||| ||||||||||||| ||||||
Sbjct: 101 atctataagaatgtgggcaatcctagaatgacttatattgtgaaacggagggagta 156
Score = 52.0 bits (26), Expect = 3e-06
Identities = 89/109 (81%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| ||||| |||||||| |||||||||||| ||||| ||| ||||||||||||
Sbjct: 118 gcccacattcttatagatactaatgaatctagccacatatatgtcc--agattcattaac 61
Query: 107 gtctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||||||| ||| ||| |||| || | |||| ||| |||||||||
Sbjct: 60 atctatatgaatgtgggcaatgctagaatgacttatattatgaaacgga 12
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 99 tcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacggatgg 158
|||||||| || |||||||| |||| || |||| || | |||||||||||||||||| ||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 159 agta 162
||||
Sbjct: 8 agta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 111 atatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||||||||| || |||| || | ||||||||||||||||||
Sbjct: 101 atatgaatatggaaaatgctagaatgacttacattgtgaaacgga 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 152 tacttcctccgtttcacaatgta 130
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 126/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgt-agactttctacgtatcgcccgcattcatatagatat 66
||||||||||||||||||||||| || | ||||| | || ||| |||||||| ||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattcta-gcatttcccacattcatacttatat 62
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
||||||||||||| |||| | ||| ||||||||||| | || ||||| || || ||
Sbjct: 63 taatgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaa 122
Query: 127 cgctataaagtcttacattgtgaaacggatggagta 162
|||| || | |||||||||||||||||| ||||||
Sbjct: 123 tgctaaaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
|||||||||||||| |||| | ||| |||||||||| | || |||||||| |||| ||
Sbjct: 100 taatgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaa 41
Query: 127 cgctataaagtcttacattgtgaaacggatggagta 162
|||| || | |||||||| ||||||||| ||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 99 tcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacggatgg 158
|||||||| || |||||||| |||| || |||| || | |||||||||||||||||| ||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggg 148
Query: 159 agta 162
||||
Sbjct: 149 agta 152
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 111 atatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtacttt 166
|||||||| |||| || |||| || | |||||||||||||||||| | ||||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagtacttt 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 67 taatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaa 126
|||||||||||||| |||| | ||| |||||||||| | || |||||||| |||| ||
Sbjct: 100 taatgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaa 41
Query: 127 cgctataaagtcttacattgtgaaacggatggagta 162
|||| || | |||||||| ||||||||| ||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 79 attcatatgtgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtc 138
|||||||| | ||| ||||||||||||| | ||||||||| ||| || |||| ||||||
Sbjct: 49 attcatatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtc 108
Query: 139 ttacattgtgaaacggatggagta 162
||| | | ||||||||| ||||||
Sbjct: 109 ttataatttgaaacggagggagta 132
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 56.0 bits (28), Expect = 2e-07
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 72 aatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggacaacgcta 131
||||||||| |||| | ||| ||||||||||||| || ||||||||||| || ||||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgcta 36
Query: 132 taaagtcttacattgtgaaacggatggagtac 163
|| | |||||||| ||||||||| |||||||
Sbjct: 35 gaatgacttacattatgaaacggagggagtac 4
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||||| | ||||||||||||||| |||| ||| ||||||||||||| |||
Sbjct: 85 cattcatataggtgttaatgaatctagatatatatagatgtctagattcattaacaccta 26
Query: 112 tatgaatatgga 123
||||||| ||||
Sbjct: 25 tatgaatgtgga 14
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtctta 141
||||||||||||| | ||||||||| ||||||| |||| |||||||||
Sbjct: 67 tagattcattaacatatatatgaatgtggacaatgctagaaagtctta 114
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 97 attcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
|||||||||| || ||||||||||||| || | || || | ||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacgga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 90/111 (81%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| ||||||||||||| |||| | | | ||||||||||||| | |
Sbjct: 115 cattcatattgatggtaatgaatctagacatatatatctatctagattcattaacaacaa 56
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||| ||| || |||| || | |||||||||||||||||| ||||||
Sbjct: 55 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 93/113 (82%), Gaps = 2/113 (1%)
Strand = Plus / Plus
Query: 7 catacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagata 65
|||||| |||||||||||||||||| | | ||||| | || ||| ||||||||| | |
Sbjct: 3 catactccctccgtttcacaatgtaagtcattcta-gcatttcccacattcatattgttg 61
Query: 66 ttaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaat 118
||||||||||||||| |||| | ||| ||||||||||| | || ||||||||
Sbjct: 62 ttaatgaatctagatagatatatatgtctagattcattaccatcaatatgaat 114
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 110 tatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtact 164
||||||||||||||||| |||| ||||||||| ||| ||| ||||| | ||||||
Sbjct: 53 tatatgaatatggacaatgctagaaagtcttatattatgagacggaggaagtact 107
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| |||||||||| || ||||| |||||||| |||| |||| ||||||||||||
Sbjct: 43 gcccacattcatatatatgttaataaatctagacatatatatgtgccaagattcattaac 102
Query: 107 gtctatatgaatatggacaacgctataaagtctta 141
| ||||||||| ||| ||| |||| |||||||||
Sbjct: 103 atatatatgaatgtgggcaatgctagaaagtctta 137
Score = 46.1 bits (23), Expect = 2e-04
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| |||||||||| || ||||||||||| | ||||| | ||| |||||| ||||||
Sbjct: 120 gcccacattcatatatatgttaatgaatcttggcacatatatatgtctagatttattaac 61
Query: 107 gtctatatgaatatggacaacgctataaagtctta 141
| ||||||||| ||| ||| || | |||||||||
Sbjct: 60 atatatatgaatgtgggcaatgccagaaagtctta 26
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||||||||||| |||| || |||||||||||||| | | ||||||||| ||||||
Sbjct: 59 tctatatgaatgtggataatgctataaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtact 164
|||||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggatggagtact 3
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 96 gattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||||||| || |||||||| ||| || |||| || | ||||||||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgta 112
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 90/111 (81%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| || ||||||||||||||| |||| | ||| ||||||||||| | || |
Sbjct: 48 cattcatatttatgttaatgaatctagatagatatatatgtctagattcattatcatcaa 107
Query: 112 tatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
||| ||| || | || |||| || | |||| ||||||||||||| ||||||
Sbjct: 108 tataaatgtgaaaaatgctagaatggcttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| |||||||||||| || |||| | ||| ||||||||||||| || |
Sbjct: 89 cattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaa 30
Query: 112 tatgaat 118
|||||||
Sbjct: 29 tatgaat 23
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||| ||| |||||||||||||| |||| | | | ||||||||||||| || |
Sbjct: 22 cattcatattgatgttaatgaatctagacatatatatctatttagattcattaacatcaa 81
Query: 112 tatgaat 118
|||||||
Sbjct: 82 tatgaat 88
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| |||| || |||| || | |||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||| ||||| ||||||||||| ||| ||| |||| ||||||||| | | |||||||
Sbjct: 73 tagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||||||||||||||| | | || ||||||||| | || |||| ||||||||||||| |
Sbjct: 4 atacttcctccgtttcatattataagactttcta-gcattgcccacattcatatagatgt 62
Query: 67 taatgaatctag 78
||| ||||||||
Sbjct: 63 taacgaatctag 74
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| |||| || |||| || | |||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| ||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgt-agactttctacgtatcgcccgcattcatatagatatt 67
|||||||||||||||||||||| || | ||||| | || ||| ||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattcta-gcatttcccacattcatattgatgtt 63
Query: 68 aatgaatctaga 79
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| ||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgta 118
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 52.0 bits (26), Expect = 3e-06
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatat 66
||||||||||||||||| |||||| | | ||||| | || ||| ||||||||| |||||
Sbjct: 116 atacttcctccgtttcataatgtaagtcattcta-gcatttcccacattcatattgatat 58
Query: 67 taatgaatctagat 80
||||||||||||||
Sbjct: 57 taatgaatctagat 44
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 115 gaatatggacaacgctataaagtcttacattgtgaaac 152
|||||||||||| |||| ||||||||||||| ||||||
Sbjct: 52 gaatatggacaatgctagaaagtcttacattatgaaac 15
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 128 gctataaagtcttacattgtgaaacgga 155
|||| |||||||||||||||||||||||
Sbjct: 60 gctagaaagtcttacattgtgaaacgga 87
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 96 gattcattaacgtctatatgaatatggacaacgctataaagtctta 141
||||||||||| ||||||||||| |||||| |||| |||||||||
Sbjct: 73 gattcattaacatctatatgaatgtggacagtgctagaaagtctta 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtact 164
|||||||||||||||||| |||| ||||||||| | ||||||||| ||||||||
Sbjct: 59 tctatatgaatatggacagtgctagaaagtcttataacctgaaacggagggagtact 3
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| ||| || |||| || | |||| |||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 154 gatggagtac 163
|| |||||||
Sbjct: 132 gagggagtac 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||| | ||||||||||| ||| ||| | || ||||||||| | | |||||||
Sbjct: 70 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 129
Query: 154 gatggagta 162
|| ||||||
Sbjct: 130 gagggagta 138
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 79 attcatatgtgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtc 138
|||||||| | ||| ||||||||||||| ||||||||||| || ||| |||| || | |
Sbjct: 49 attcatatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgac 108
Query: 139 ttacattgtgaaa 151
||||||| |||||
Sbjct: 109 ttacattatgaaa 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctaga 79
||||||||||||| ||||||||||||||
Sbjct: 89 cattcatatagatgttaatgaatctaga 62
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacggatggagtact 164
|||| |||||| ||| ||| |||| ||||||||||||| | ||||||||| ||||||
Sbjct: 59 tctaaatgaatgtgggcaatgctaaaaagtcttacattataaaacggatgaagtact 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 133 aaagtcttacattgtgaaacggatggagtac 163
||||||||| ||||||||||||| |||||||
Sbjct: 95 aaagtcttatattgtgaaacggagggagtac 125
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 catacttcctccgtttcacaatgta 31
|||||||||||||||||||||||||
Sbjct: 3 catacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
|||||||| |||| ||||||||||||| | || |||| || | |||||||| |||||||
Sbjct: 73 tagattcactaacctctatatgaatataggaaatgctagaatgacttacattatgaaacg 14
Query: 154 gatggagta 162
|| ||||||
Sbjct: 13 gagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 88/109 (80%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
||||||||||| ||| |||||||| || |||| | ||| |||||||| |||| || ||
Sbjct: 49 attcatatagaggttagtgaatctatatagatatatatgtctagattcactaacctccat 108
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacggatggagt 161
|||||| ||| || |||| || | |||||||| ||||||||| |||||
Sbjct: 109 atgaatgtgggaaatgctagaatgacttacattatgaaacggagggagt 157
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 83 atatgtgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtcttac 142
|||| ||||| ||||||||||||| ||||||| || ||| ||| | || |||||||||
Sbjct: 55 atatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtcttat 114
Query: 143 attgtgaaacgga 155
||||| |||||||
Sbjct: 115 attgtaaaacgga 127
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 79 attcatatgtgtgtgtagattcattaacgtctatatgaatatggacaacgctataaagtc 138
|||||||| | ||| ||||||||||| | || ||||||||| ||| || |||| || | |
Sbjct: 49 attcatatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgac 108
Query: 139 ttacattgtgaaacgga 155
||| |||||||||||||
Sbjct: 109 ttatattgtgaaacgga 125
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 catacttcctccgtttcacaatgta 31
|||||||||||||||||||||||||
Sbjct: 134 catacttcctccgtttcacaatgta 110
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || ||| ||| ||| ||| |||| ||||||||||||| ||||||
Sbjct: 73 tagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaact 14
Query: 154 gatggagta 162
|| ||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| ||| || |||| || | |||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 154 gatggagta 162
|| ||||||
Sbjct: 122 gagggagta 130
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 111 atatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||||||||| || |||| || | ||||||||||||||||||
Sbjct: 80 atatgaatatggaaaatgctagaatgacttacattgtgaaacgga 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgta 109
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||| | || |||| ||||||| || ||||||| | ||||||||||| ||||
Sbjct: 73 tagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaacg 14
Query: 154 gatggagta 162
|| ||||||
Sbjct: 13 gagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgta 110
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgt-agactttctacgtatcgcccgcattcatatagatat 66
||||||||||||||||||||||| || | ||||| | || ||| ||||||||| ||||
Sbjct: 136 atacttcctccgtttcacaatgtaagtcattcta-gcatttcccacattcatatttatat 78
Query: 67 taatgaatctaga 79
|||||||||||||
Sbjct: 77 taatgaatctaga 65
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 catacttcctccgtttcacaatgta 31
|||||||||||||||||||||||||
Sbjct: 132 catacttcctccgtttcacaatgta 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| ||| || | || || | ||||||||||||||||
Sbjct: 68 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 127
Query: 154 gatggagta 162
|| ||||||
Sbjct: 128 gagggagta 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagat 80
||||||||| |||||||||||||||||||
Sbjct: 48 cattcatattgatattaatgaatctagat 76
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 catacttcctccgtttcacaatgta 31
|||||||||||||||||||||||||
Sbjct: 144 catacttcctccgtttcacaatgta 120
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtactt 165
|||||||||||||||||| |||||||||
Sbjct: 29 cttacattgtgaaacggagggagtactt 2
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 96 gattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||||||| || |||||||| ||| || |||| || | ||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgta 27
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
|||||||||| || || |||||||| ||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 109 atacttcctccgtttcacaatgta 86
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 108 tctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||||||| ||||||| |||| ||||||||| | | |||||||||
Sbjct: 83 tctatatgaatgtggacaatgctagaaagtcttataatatgaaacgga 130
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 97 attcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacggat 156
|||||| ||| || |||||||| ||| || |||| || | ||||||||||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 157 ggagtact 164
||||||||
Sbjct: 10 ggagtact 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgta 122
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 131 atacttcctccgtttcacaatgta 108
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 54 ttcatatagatattaatgaatctagatt 81
||||||| ||||||||||||||||||||
Sbjct: 76 ttcatattgatattaatgaatctagatt 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 ttcatatagatattaatgaatctagat 80
||||||| |||||||||||||||||||
Sbjct: 16 ttcatattgatattaatgaatctagat 42
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 127 atacttcctccgtttcacaatgta 104
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 catatagatattaatgaatctaga 79
||||||||||||||||||||||||
Sbjct: 52 catatagatattaatgaatctaga 75
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 111 atatgaatatggacaacgctataaagtcttacattgtgaaacggatggagta 162
|||||||| |||| || |||| || | |||||||||||||||||| ||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgta 27
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 97 attcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacggat 156
|||||||||| || |||||||| ||| || |||| || | |||||||||||||||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgggg 142
Query: 157 ggagtact 164
||||||||
Sbjct: 143 ggagtact 150
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatgta 31
||||||||||||||||||||||||
Sbjct: 132 atacttcctccgtttcacaatgta 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 92 tgtagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaa 151
||||||||||||||| || |||||||| |||| || ||| || | |||| |||||||||
Sbjct: 60 tgtagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaa 119
Query: 152 cgga 155
||||
Sbjct: 120 cgga 123
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgta 115
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa
Indica Group
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgta 118
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtact 164
|||||||||||||||||| ||||||||
Sbjct: 29 cttacattgtgaaacggagggagtact 3
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||| | || |||||||| ||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgta 104
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgta 108
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 96 gattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
||||||||| | || |||||||| ||| || |||| || | ||||||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 156 tggagta 162
||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 97 attcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacgga 155
|||||||| | ||||||||||||||| || |||| ||||||||| | | |||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacgga 107
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgta 87
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgta 92
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 5 accatacttcctccgtttcacaatgta 31
|||||||| ||||||||||||||||||
Sbjct: 135 accatactccctccgtttcacaatgta 109
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 143 tacttcctccgtttcacaatgta 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||| | || |||||||| ||| || |||| || | ||||||||||||||||
Sbjct: 75 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 134
Query: 154 ga 155
||
Sbjct: 135 ga 136
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/72 (83%), Gaps = 4/72 (5%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| |||||||||| || ||||||||||||| |||| | ||| |||||||||||||
Sbjct: 82 gcccacattcatatatatgttaatgaatctag----atatatatgtctagattcattaac 27
Query: 107 gtctatatgaat 118
| |||||||||
Sbjct: 26 atatatatgaat 15
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgta 129
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgta 73
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgta 108
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||| | || |||||||| ||| || |||| || | ||||||||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa
Indica Group
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
|||||| |||||| || |||||||||||| || |||| || | ||| ||||||||||||
Sbjct: 68 tagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacg 127
Query: 154 ga 155
||
Sbjct: 128 ga 129
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatg 29
||||||||||||||||||||||
Sbjct: 137 atacttcctccgtttcacaatg 116
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tacttcctccgtttcacaatgta 31
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta 27
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 47 gcccgcattcatatagatattaatgaatctagat 80
|||| ||||||||| ||| |||||||||||||||
Sbjct: 15 gcccacattcatatggatgttaatgaatctagat 48
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa Indica
Group
Length = 116
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 aagtcttacattgtgaaacggatggagtac 163
|||||||||||| ||||||||| |||||||
Sbjct: 84 aagtcttacattatgaaacggagggagtac 113
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 atacttcctccgtttcacaatg 29
||||||||||||||||||||||
Sbjct: 109 atacttcctccgtttcacaatg 88
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 129 ctataaagtcttacattgtgaaacggatggagta 162
|||||| | |||||||||||||||||| ||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 catacttcctccgtttcacaat 28
||||||||||||||||||||||
Sbjct: 3 catacttcctccgtttcacaat 24
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 132 cttacattgtgaaacggagggagtac 157
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 92 cttacattgtgaaacggagggagtac 117
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 70 cttacattgtgaaacggagggagtac 95
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatggacaacgctataaagtcttacattgtgaaacg 153
||||||||||||| || |||||||| ||| || | || || | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Query: 154 ga 155
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 139 ttacattgtgaaacggatggagtact 164
||||||||||||||||| ||||||||
Sbjct: 28 ttacattgtgaaacggagggagtact 3
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 cttacattgtgaaacggatggagtac 163
|||||||||||||||||| |||||||
Sbjct: 123 cttacattgtgaaacggagggagtac 148
