miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 133 bits (67), Expect = 9e-31
Identities = 113/128 (88%), Gaps = 4/128 (3%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 89 atgaatctaggcatatat----atgtgggtaatgctaaaaagtcttataatatgaaacgg 144
|||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||
Sbjct: 72 atgaatctagacatatatatgaatgtgggtaatactagaaagtcttataatatgaaacgg 13
Query: 145 atgaagta 152
| ||||||
Sbjct: 12 aggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 28 gtactacctccgttccaggttataagactttctaatattatccacattcatatatatgt 86
||||| |||||||| || ||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcatattataagactttctagtattacccacattcatatatatgt 62
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 107 bits (54), Expect = 5e-23
Identities = 99/113 (87%), Gaps = 7/113 (6%)
Strand = Plus / Minus
Query: 47 ttataagactttctaatattatccacattcatatatatgttaatgaatctag---gcata 103
||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 117 ttataagactttctagcattgtccacattcatatatatgttaatgaatctagacaacata 58
Query: 104 tat----atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||| ||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 57 tatatgaatgtgggtaatgctagaaagtcttataataagaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 47 ttataagactttctaatattatccacattcatatatatgtt 87
||||||||||||||| |||| |||||||||||||||||||
Sbjct: 23 ttataagactttctagcattacccacattcatatatatgtt 63
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 115 aatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||| |||||||||||||||||||| || ||||||
Sbjct: 98 aatgctagaaagtcttataatatgaaacagaggaagta 135
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 103 bits (52), Expect = 8e-22
Identities = 106/124 (85%)
Strand = Plus / Plus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 64
Query: 89 atgaatctaggcatatatatgtgggtaatgctaaaaagtcttataatatgaaacggatga 148
|||||||||| ||| |||| ||| ||||||| ||||||||||||||||||| ||| ||
Sbjct: 65 atgaatctagacatgaatatatggacaatgctagaaagtcttataatatgaaaaggagga 124
Query: 149 agta 152
||||
Sbjct: 125 agta 128
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| |||||||||||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatgaaacgga 12
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 103 bits (52), Expect = 8e-22
Identities = 106/124 (85%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 69
Query: 89 atgaatctaggcatatatatgtgggtaatgctaaaaagtcttataatatgaaacggatga 148
|||||||||| ||| |||| ||| ||||||| ||||||||||||||||||| ||| ||
Sbjct: 68 atgaatctagacatgaatatatggacaatgctagaaagtcttataatatgaaaaggagga 9
Query: 149 agta 152
||||
Sbjct: 8 agta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| |||||||||||||||||||||||
Sbjct: 83 atgtgggcaatgctagaaagtcttataatatgaaacgga 121
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 28 gtactacctccgttccaggttataagactttctaatattatccacattcatatatatgtt 87
||||| |||||||| || |||||||||||||||| ||| ||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtc 63
Query: 88 aatgaatctaggcatatatatgtg 111
||||||||||| ||||||||||||
Sbjct: 64 aatgaatctagacatatatatgtg 87
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||| |||| || ||||||||||||||||||||||| ||||||
Sbjct: 50 atgtgggcaatgttagaaagtcttataatatgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| ||| |||| |||||||| |||| |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 89 atgaatcta 97
|||||||||
Sbjct: 98 atgaatcta 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 123 aaagtcttataatatgaaacgga 145
|||||||||||||||||||||||
Sbjct: 129 aaagtcttataatatgaaacgga 151
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 158 tactacctccgtttcaagttataagactttctagcattgcccacattcatatatatgtta 99
Query: 89 atgaatctaggcatatatat 108
|||||||| |||| ||||||
Sbjct: 98 atgaatcttggcacatatat 79
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgtta 64
Query: 89 atgaatctaggcatatatatgtg 111
|| ||||||| ||||||||||||
Sbjct: 65 ataaatctagacatatatatgtg 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagtat 153
||||||| ||||| | |||||||||||| ||||||||| |||||||
Sbjct: 50 atgtgggcaatgccagaaagtcttataacttgaaacggaggaagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| |||||||||||| |||||||||
Sbjct: 113 atgtgggcaatgctagaaagtcttataacttgaaacgga 151
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 100/117 (85%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 89 atgaatctaggcatatatatgtgggtaatgctaaaaagtcttataatatgaaacgga 145
|||||||||| | || ||||||| ||||||| ||| |||||||||||||||||||
Sbjct: 66 atgaatctag--acatgaatgtgggcaatgctagaaaatcttataatatgaaacgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagtat 153
||||||| ||||||| ||||||||||||||||||||||| |||||||
Sbjct: 81 atgtgggcaatgctagaaagtcttataatatgaaacggaggaagtat 127
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatatg 109
|||||||||||| ||||||||||||||| || |||||||||||||||| ||||||||||
Sbjct: 26 taagactttctagcattatccacattcatttagatgttaatgaatctagacatatatatg 85
Query: 110 tggg 113
||||
Sbjct: 86 tggg 89
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 8e-16
Identities = 88/103 (85%), Gaps = 4/103 (3%)
Strand = Plus / Minus
Query: 47 ttataagactttctaatattatccacattcatatatatgttaatgaatctaggcatatat 106
||||||||||||||| ||| ||||||||||||| ||||||||||||||| || | ||
Sbjct: 114 ttataagactttctagcattgcccacattcatatagatgttaatgaatctaaacacacat 55
Query: 107 ----atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| |||||||||||||||||||||||
Sbjct: 54 gtgaatgtgggcaatgctagaaagtcttataatatgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||| ||||||| |||||||||||||||||||| || ||||||
Sbjct: 87 atgtgggcaatgctagaaagtcttataatatgaaactgaggaagta 132
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 79.8 bits (40), Expect = 1e-14
Identities = 99/119 (83%), Gaps = 6/119 (5%)
Strand = Plus / Plus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 89 atgaatctaggcatatatat------gtgggtaatgctaaaaagtcttataatatgaaa 141
| ||||||||||||| |||| ||||| ||||||| ||||||||||||| |||||
Sbjct: 65 acgaatctaggcatacatatatgaatgtgggcaatgctagaaagtcttataatctgaaa 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagtat 153
||||||| ||||||| ||||||||||||||||||||||| |||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatgaaacggaggaagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 28 gtactacctccgttccaggttataagactttctaatattatccacattcatatat 82
||||||||||| || ||| ||||||||||||||| ||| ||||||||||||||
Sbjct: 135 gtactacctccatttcagattataagactttctagcattgcccacattcatatat 81
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| ||| ||||||||||||| ||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 89 atgaatctaggcatatatatgtg 111
|||||||||| ||||||||||||
Sbjct: 98 atgaatctagacatatatatgtg 76
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||| ||||||| ||||||||||||||||||||||| ||||||
Sbjct: 113 atgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 108 tgtgggtaatgctaaaaagtcttataatatgaaacgga 145
|||||| ||||||| |||||||||||||||||||||||
Sbjct: 49 tgtgggcaatgctagaaagtcttataatatgaaacgga 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| ||| ||||| ||||||| ||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 89 atgaa 93
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 5e-14
Identities = 91/108 (84%), Gaps = 4/108 (3%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatat--- 106
|||||||||||| ||| |||||||||||||| |||||||||||||||| ||| |||
Sbjct: 111 taagactttctagcattgtccacattcatatagatgttaatgaatctagacatctatatg 52
Query: 107 -atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagtat 153
|||||| ||||||| ||||||||| | ||||||| ||| |||||||
Sbjct: 51 aatgtggacaatgctagaaagtcttacattatgaaaaggaggaagtat 4
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 49 ataagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatat 108
||||||||||||| ||| ||||||||||||||||||||||||||||||| ||| ||| |
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgt 60
Query: 109 gtg 111
|||
Sbjct: 61 gtg 63
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 49 ataagactttctaatattatccacattcatatatatgttaatgaatctaggca 101
||||||||||||| ||| ||||||||||||| |||||||||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggca 62
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 28 gtactacctccgttccaggttataagactttctaatattatccacattcatatatatgtt 87
||||| |||||||| ||| ||||||||||||||| ||| ||||||||||||| |||||
Sbjct: 160 gtactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtt 101
Query: 88 aatgaatctag 98
|||||||||||
Sbjct: 100 aatgaatctag 90
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||||||||||| |||||||||||||||||||||||
Sbjct: 50 atgtgggtaatgctagaaagtcttataatatgaaacgga 12
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| |||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 89 a 89
|
Sbjct: 65 a 65
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| ||||||||||||| |||||||||
Sbjct: 114 atgtgggcaatgctagaaagtcttataatctgaaacgga 152
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 49 ataagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatat 108
||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatat 60
Query: 109 gtg 111
|||
Sbjct: 61 gtg 63
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 49 ataagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatat 108
||||||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatat 55
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 87/103 (84%), Gaps = 4/103 (3%)
Strand = Plus / Minus
Query: 47 ttataagactttctaatattatccacattcatatatatgttaatgaatctaggcatatat 106
||||||||||||||| ||| ||||||||||||| ||||||||||||||| || | |
Sbjct: 114 ttataagactttctagcattgcccacattcatatagatgttaatgaatctaaacacacac 55
Query: 107 ----atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| |||||||||||||||||||||||
Sbjct: 54 gtgaatgtgggcaatgctagaaagtcttataatatgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||| ||||||| |||||||||||||||||||| || ||||||
Sbjct: 87 atgtgggcaatgctagaaagtcttataatatgaaactgaggaagta 132
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 111/135 (82%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 28 gtactacctccgttccaggttataagactttctaatattatccacattcatatatatgtt 87
||||| |||||||| || ||||||||||||||| ||| |||||||||| ||| |||||
Sbjct: 4 gtactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtt 63
Query: 88 aatgaatctaggca-------tatat--atgtgggtaatgctaaaaagtcttataatatg 138
||| ||||||| || ||||| |||||| ||||||| ||||||||||||||||
Sbjct: 64 aataaatctagacacaacatctatatgaatgtggacaatgctagaaagtcttataatatg 123
Query: 139 aaacggatgaagtat 153
||||||| |||||||
Sbjct: 124 aaacggaggaagtat 138
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 115 aatgctaaaaagtcttataatatgaaacgga 145
||||||| |||||||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttataatatgaaacgga 12
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtt 87
|||| |||||||| || ||||||||||||||| ||| |||||||||||||| |||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 49 ataagactttctaatattatccacattcatatatatgttaatgaatctaggcatatat 106
||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatat 57
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 49 ataagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatat 108
||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatat 60
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatatg 109
|||| ||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 26 taagtctttctagtattgcccacattcatatagatgttaatgaatctagacatatatatg 85
Query: 110 tg 111
||
Sbjct: 86 tg 87
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 73 attcatatatatgttaatgaatctaggcatatatat 108
||||||||| |||||||||||||||| || ||||||
Sbjct: 114 attcatatagatgttaatgaatctagacacatatat 79
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 73.8 bits (37), Expect = 7e-13
Identities = 104/126 (82%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 27 cgtactacctccgttccaggttataagactttctaatattatccacattcatatatatgt 86
|||||| |||||||| || ||||||||||||||||||| ||||||||| || ||||
Sbjct: 126 cgtactccctccgtttcacaatataagactttctaatattgcacacattcatttagatgt 67
Query: 87 taatgaatctaggcatatatatgtgggtaatgctaaaaagtcttataatatgaaacggat 146
|||| |||||| || ||||||| ||||||||||||||||| | ||| ||||||||
Sbjct: 66 taataaatctaa----atgaatgtgggcaatgctaaaaagtcttacattataaaacggat 11
Query: 147 gaagta 152
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatat 106
|||||||||||| |||| ||||||||||||| |||||||||||||||| |||||||
Sbjct: 137 taagactttctagtattgcccacattcatatagatgttaatgaatctagacatatat 81
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| ||| ||||||||||||| ||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 89 atgaatctaggcatatatat 108
|||||||||| |||||||||
Sbjct: 78 atgaatctagacatatatat 59
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagtatt 154
||||||| |||| || ||||||||||||||||||||||| | ||||||
Sbjct: 93 atgtgggcaatgatagaaagtcttataatatgaaacggagggagtatt 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 47 ttataagactttctaatattatccacattcatatatat 84
|||||||||| |||| |||| ||||||||||||||||
Sbjct: 23 ttataagactatctagtattgcccacattcatatatat 60
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 57 ttctaatattatccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||| ||||||||||||| |||||||||||||||| |||||||||
Sbjct: 129 ttctaatattttccacattcatattgatgttaatgaatctagacatatatat 78
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 11 ccacattcatatatatgttaatgaatctagacatatatat 50
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/42 (95%), Gaps = 2/42 (4%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatatgt 110
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 80 ccacattcatatatatgttaatgaatctag--atatatatgt 41
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 101 atatatatgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||| |||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 63 atataaatgtggataatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
|||||| |||||||| |||||||||||||||||||||||
Sbjct: 50 atgtggataatgctataaagtcttataatatgaaacgga 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatata 81
|||| |||||||| || |||||||||||| || ||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttatagcattatccacattcatata 57
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatata 81
|||| |||||||| || ||||||||||||||| |||||||||||| |||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattatccacatttatata 62
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 110 tgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
|||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 72 tgggtaatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| |||| || |||||||||||||||||||||||
Sbjct: 50 atgtgggcaatgttagaaagtcttataatatgaaacgga 12
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| |||| ||| ||||||||| ||| ||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattacccatattcatatagatgata 55
Query: 89 atgaat 94
||||||
Sbjct: 54 atgaat 49
Score = 44.1 bits (22), Expect = 7e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcat 78
|||| |||||||| || |||||||||||||||| ||| ||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctaacattgcccacattcat 54
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagtat 153
||||||| ||||||| ||||||||||||||||||||||| |||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatgaaacggaggaagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 89 atgaatcta 97
|||||||||
Sbjct: 65 atgaatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| || ||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 89 atgaatcta 97
|||||||||
Sbjct: 100 atgaatcta 92
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| |||||||||||||||||||||||
Sbjct: 115 atgtgggcaatgctagaaagtcttataatatgaaacgga 153
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 29 tactacctccgttccaggttataagactttctaatattatccacattcatatatatgtta 88
|||| |||||||| |||| |||||||||||||| | | |||||||||||||| ||||||
Sbjct: 139 tacttcctccgtttcaggctataagactttctagcactgtccacattcatatagatgtta 80
Query: 89 atgaatc 95
|||||||
Sbjct: 79 atgaatc 73
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 gtactacctccgttccaggttataagactttcta 61
||||| |||||||| |||||||||||||||||||
Sbjct: 4 gtactccctccgtttcaggttataagactttcta 37
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatatg 109
|||||||||||| ||| || ||||||||||| |||||||||||||||| ||||||| ||
Sbjct: 26 taagactttctagcattgtctacattcatatagatgttaatgaatctagacatatatgtg 85
Query: 110 tg 111
||
Sbjct: 86 tg 87
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatcta 97
|||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 137 taagactttctaggtttgtccacattcatatagatgttaatgaatcta 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 115 aatgctaaaaagtcttataatatgaaacggatgaagtat 153
||||||| ||||||||| | ||||||||||| |||||||
Sbjct: 42 aatgctagaaagtcttacattatgaaacggaggaagtat 4
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 70 cacattcatatatatgttaatgaatctaggcatatatatgt 110
|||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 115 cacattcatatagatgttaatgaatctatgcatatatatgt 75
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatatg 109
|||||||||| || ||||||||||||| || ||||||||||
Sbjct: 45 ccacattcatgtagatgttaatgaatcaagacatatatatg 85
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 135 taagactttctagcattgtccacattcatataaatgttaatgaatctag 87
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 115 aatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||| ||||||||| | ||||||||||| ||||||
Sbjct: 119 aatgctagaaagtcttacattatgaaacggaggaagta 156
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatat 106
|||||||||||| |||| ||| ||||||||| |||||||||||||||| |||||||
Sbjct: 137 taagactttctagtattgcccatattcatatagatgttaatgaatctagacatatat 81
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 65.9 bits (33), Expect = 2e-10
Identities = 86/104 (82%), Gaps = 6/104 (5%)
Strand = Plus / Minus
Query: 48 tataagactttctaatattatccacattcatatatatgttaatgaatctaggcatatata 107
||||||||||||||| ||| |||||| ||||| ||||||||||||||| || |||||
Sbjct: 115 tataagactttctaacattgcccacatatatatagatgttaatgaatctaaacacatata 56
Query: 108 t------gtgggtaatgctaaaaagtcttataatatgaaacgga 145
| ||||| ||||||| ||||||||||| |||||||||||
Sbjct: 55 tatagatgtgggcaatgctagaaagtcttatattatgaaacgga 12
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 68 tccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 44 tccacattcatatagatgctaatgaatctaggcatatatat 84
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 68 tccacattcatatatatgttaatgaatctaggcatatatat 108
||||||||||||| |||||||||||||||| | |||||||
Sbjct: 119 tccacattcatattgatgttaatgaatctagacttatatat 79
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 100 catatatatgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
|||||| | ||||| ||||||| ||||||||||||||||||||||| ||||||
Sbjct: 52 catataaacgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 104
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| |||||||||||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatgaaacgga 12
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 70 cacattcatatatatgttaatgaatctaggcatatatatg 109
|||||||||||| |||||||||||||||| ||||||||||
Sbjct: 91 cacattcatatagatgttaatgaatctagacatatatatg 52
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggca 101
|||||||||||| ||| ||||||||||||||||| |||||||||||||||
Sbjct: 137 taagactttctagcattgcccacattcatatatatgctaatgaatctaggca 86
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| ||||||||| | |||||||||||
Sbjct: 113 atgtgggcaatgctagaaagtcttacattatgaaacgga 151
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 109 gtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||| ||||||| ||||||||||||||||||||||| ||||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 87
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatat 104
||||||||| || ||| |||||||||||||| |||||||||||||||| |||||
Sbjct: 137 taagactttttaggattgtccacattcatatagatgttaatgaatctagacatat 83
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 48 tataagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||||||| |||| ||| ||||||||| ||||||||||| ||||
Sbjct: 24 tataagactttctagtattgcccatattcatatagatgttaatgaacctag 74
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 48 tataagactttctaatattatccacattcatatatatgttaatgaat 94
|||||||||||||| |||| |||||||||||||| ||| ||||||||
Sbjct: 24 tataagactttctagtattgtccacattcatataaatgctaatgaat 70
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 110 tgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
|||| ||||||| ||||||||||||||||||||||| ||||||
Sbjct: 72 tgggcaatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatat 104
||||||||| || ||| |||||||||||||| |||||||||||||||| |||||
Sbjct: 26 taagactttttaggattgtccacattcatatagatgttaatgaatctagacatat 80
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 48 tataagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||||||| |||| ||| ||||||||| ||||||||||| ||||
Sbjct: 139 tataagactttctagtattgcccatattcatatagatgttaatgaacctag 89
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 47 ttataagactttctaatattatccacattcatatatatgttaatgaatcta 97
||||||||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct: 23 ttataagactttctagaattgcccacattcatatagatgttaatgaatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatcta 97
||||||||||||| |||||||||||||||
Sbjct: 120 ccacattcatatagatgttaatgaatcta 92
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 124 aagtcttataatatgaaacggatgaagta 152
|||||||||||||||||||||| ||||||
Sbjct: 127 aagtcttataatatgaaacggaggaagta 155
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaac 142
||||||| ||| ||| ||||||||||||||||||||
Sbjct: 50 atgtgggcaattctagaaagtcttataatatgaaac 15
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||| || | ||||||||||||| |||||||||||||||| || ||||||
Sbjct: 2 taagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatat 60
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 70 cacattcatatatatgttaatgaatctaggcatatatatgtg 111
|||||||||||| |||| ||||||||||| ||||||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtg 52
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatatg 109
||||||||||||| ||| ||||||||||||| ||| ||||||||||| ||||||| ||
Sbjct: 116 taagactttctaacattgcccacattcatatagatgcaaatgaatctagacatatatgtg 57
Query: 110 tg 111
||
Sbjct: 56 tg 55
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggca 101
|||||||||||| ||| |||||||||||| |||| |||||||||||||||
Sbjct: 5 taagactttctagcattgcccacattcatatctatgctaatgaatctaggca 56
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatatg 109
|||||||||||| |||| |||||||||| || ||||||||||||||| ||||| ||||
Sbjct: 26 taagactttctagcattacccacattcatttagatgttaatgaatctaaacatatgtatg 85
Query: 110 tg 111
||
Sbjct: 86 tg 87
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||||||||||| ||||||||| | ||||||||||| ||||||
Sbjct: 50 atgtgggtaatgctataaagtcttacattatgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctag 98
||||||||||||| ||| ||||||||||||| ||| ||||||||||||
Sbjct: 137 taagactttctaacattgcccacattcatatagatgctaatgaatctag 89
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctag 98
||||||||||||||||||||||||||||||
Sbjct: 45 ccacattcatatatatgttaatgaatctag 74
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaac 142
||||||| ||||||||||||||||| | ||||||||
Sbjct: 113 atgtgggcaatgctaaaaagtcttacattatgaaac 148
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 48 tataagactttctaatattatccacattcatatatatgttaatgaatcta 97
|||||||||||||| |||| |||||| |||||| |||||||||||||||
Sbjct: 117 tataagactttctagcattacccacatacatatagatgttaatgaatcta 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 101 atatatatgtgggtaatgctaaaaagtcttataatatgaaacgga 145
|||| |||||||||||||||| ||||||||||| | |||||||||
Sbjct: 85 atatgtatgtgggtaatgctagaaagtcttatattgtgaaacgga 129
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 48 tataagactttctaatattatccacattcatatatatgttaatgaatcta 97
|||||||||||||| |||| |||||| |||||| |||||||||||||||
Sbjct: 24 tataagactttctagcattacccacatacatatagatgttaatgaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 101 atatatatgtgggtaatgctaaaaagtcttataatatgaaacgga 145
|||| |||||||||||||||| ||||||||||| | |||||||||
Sbjct: 56 atatgtatgtgggtaatgctagaaagtcttatattgtgaaacgga 12
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatatg 109
|||||||||||| ||| ||||||||||||| |||||||||||||||| |||||| ||
Sbjct: 137 taagactttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtg 78
Query: 110 tg 111
||
Sbjct: 77 tg 76
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagtat 153
||||||| ||||||| ||||||||| | ||||||||||| |||||||
Sbjct: 113 atgtgggcaatgctagaaagtcttacattatgaaacggaggaagtat 159
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 70 cacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 115 aatgctaaaaagtcttataatatgaaacgga 145
||||||||||||||||| | |||||||||||
Sbjct: 42 aatgctaaaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatatgt 110
|||||||||||| |||||||||||||||| |||||||||||
Sbjct: 116 ccacattcatattgatgttaatgaatctagacatatatatgt 75
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 71 acattcatatatatgttaatgaatctaggcatatatatgt 110
|||||||||| |||||||||||| ||| |||||||||||
Sbjct: 47 acattcatattgatgttaatgaatgtagacatatatatgt 86
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatatg 109
|||||||||||| ||| ||||||||||||| |||||||||||||||| |||||| ||
Sbjct: 26 taagactttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtg 85
Query: 110 tg 111
||
Sbjct: 86 tg 87
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagtat 153
||||||| ||||||| ||||||||| | ||||||||||| |||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttacattatgaaacggaggaagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 70 cacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 117 cacattcatatagatgttaatgaatctag 89
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 115 aatgctaaaaagtcttataatatgaaacgga 145
||||||||||||||||| | |||||||||||
Sbjct: 121 aatgctaaaaagtcttacattatgaaacgga 151
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 48 tataagactttctaatattatccacattcatatatatgttaatgaatctaggcatata 105
|||||| | |||||| ||| ||||||||||||| |||||||||||||||| ||||||
Sbjct: 120 tataagtcattctaacattttccacattcatattgatgttaatgaatctagacatata 63
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatata 105
||||||||||||| |||||||||||||||| ||||||
Sbjct: 45 ccacattcatatagatgttaatgaatctagacatata 81
Score = 44.1 bits (22), Expect = 7e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||| ||||||| |||| |||| | ||||||||||| ||||||
Sbjct: 50 atgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa
Indica Group
Length = 112
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||||| ||| |||||||||||||| ||||||| ||||||||
Sbjct: 87 taagactttctagcattgtccacattcatatagatgttaacgaatctag 39
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||||| ||| |||||||||||||| |||||||| |||||||
Sbjct: 119 taagactttctagcattgtccacattcatatagatgttaataaatctag 71
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 64 attatccacattcatatatatgttaatgaatctaggcatatatat 108
|||| |||||||||||| |||||||||||||||| |||||||||
Sbjct: 40 attacccacattcatattgatgttaatgaatctagacatatatat 84
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 118 ccacattcatattaatgttaatgaatctag 89
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||||| ||| |||||||||||||| |||||||| |||||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatgttaataaatctag 74
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 68 tccacattcatatatatgttaatgaatctaggcatatatat 108
||||||||||||| |||||||||||||||| |||||||||
Sbjct: 119 tccacattcatattaatgttaatgaatctagacatatatat 79
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 110 tgggtaatgctaaaaagtcttataatatgaaacgga 145
|||||||||||| ||||||||||| |||||||||||
Sbjct: 98 tgggtaatgctagaaagtcttatattatgaaacgga 133
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 48 tataagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||||||| |||| ||| ||||||||| ||| ||||||||||||
Sbjct: 121 tataagactttctagcattacccatattcatatagatgctaatgaatctag 71
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||| |||||||||||||||| |||||||||
Sbjct: 118 ccacattcatattgatgttaatgaatctagacatatatat 79
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||| |||||||||||||||| |||||||||
Sbjct: 92 ccacattcatattgatgttaatgaatctagacatatatat 53
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 57 ttctaatattatccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||| |||||||||||| |||||||||||| ||| |||||||||
Sbjct: 130 ttctaatatttcccacattcatattgatgttaatgaatgtagacatatatat 79
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 106 tatgtgggtaatgctaaaaagtcttataatatgaaacgga 145
|||||||||| ||||||||||||||||| | |||||||||
Sbjct: 108 tatgtgggtagtgctaaaaagtcttatattgtgaaacgga 147
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatat 104
|||||||||| || |||||||||||||||| |||||
Sbjct: 45 ccacattcatttagatgttaatgaatctagacatat 80
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatcta 97
|||||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct: 119 taagactttctagcattgcccacattcatatagatgttaatgaatcta 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 115 aatgctaaaaagtcttataatatgaaacggatgaagtat 153
||||||| ||||||||| | ||||||||||| |||||||
Sbjct: 42 aatgctagaaagtcttacattatgaaacggaagaagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| ||||||||| | |||||||||||
Sbjct: 95 atgtgggcaatgctagaaagtcttacattatgaaacgga 133
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||| |||||||||||||||| |||||||||
Sbjct: 19 ccacattcatattgatgttaatgaatctagacatatatat 58
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagtat 153
||||||| ||||||| ||||||||| | | |||||||||||||||||
Sbjct: 81 atgtgggcaatgctagaaagtcttacattgtgaaacggatgaagtat 127
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatat 108
|||||| ||||| |||| |||||||||||| || ||||||||||||| |||||||||
Sbjct: 137 taagacattctagtatttcccacattcatattgatattaatgaatctagacatatatat 79
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatatgtgggtaatgctaaaaagtc 128
||||||||| ||| | |||||||||||||| ||||| ||||||| |||||| ||||||
Sbjct: 19 ccacattcacatagaagttaatgaatctagacatatgaatgtgggcaatgctggaaagtc 78
Query: 129 tta 131
|||
Sbjct: 79 tta 81
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 7e-07
Identities = 73/88 (82%), Gaps = 4/88 (4%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatatg----tgggtaatgctaaaa 124
|||||| |||||| |||||||||||||||| | | |||||| |||||||||||| ||
Sbjct: 92 ccacatgcatatagatgttaatgaatctagacgtctatatgcatatgggtaatgctagaa 33
Query: 125 agtcttataatatgaaacggatgaagta 152
| |||| | ||||||||||| ||||||
Sbjct: 32 tgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatata 107
|||||||||||| |||||||||||||||| ||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctagacatatata 83
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 70 cacattcatatatatgttaatgaatctaggcatatatat 108
||||||||||| |||||||||||||||| |||||||||
Sbjct: 117 cacattcatattaatgttaatgaatctagacatatatat 79
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 54.0 bits (27), Expect = 7e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatatgtgggtaatgctaaaaagtc 128
||||||||| ||| | |||||||||||||| ||||| ||||||| |||||| ||||||
Sbjct: 121 ccacattcacatagaagttaatgaatctagacatatgaatgtgggcaatgctggaaagtc 62
Query: 129 tta 131
|||
Sbjct: 61 tta 59
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 54/62 (87%), Gaps = 2/62 (3%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatatg 109
||||||||| ||| ||| ||||||||| ||| |||||||||||||||| |||||||||
Sbjct: 137 taagactttttaacattgcccacattcacatagatgttaatgaatctag--atatatatg 80
Query: 110 tg 111
||
Sbjct: 79 tg 78
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 70 cacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatat 104
|||||||||||| ||| ||||||||||||| |||||||| ||||||| |||||
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaataaatctagacatat 59
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 70 cacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||| |||||||||||||||| ||| |||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacatctatat 84
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatata 107
|||||||||||| ||| ||||||||||||| ||||||||
Sbjct: 95 ccacattcatatttatattaatgaatctagacatatata 57
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 51 aagactttctaatattatccacattcatatatatgttaatgaatcta 97
||||||||||| |||| |||||||||| || |||||||||||||||
Sbjct: 27 aagactttctagcattacccacattcatttagatgttaatgaatcta 73
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||||||||||| |||||||| | ||||||||||| ||||||
Sbjct: 50 atgtgggtaatgctagaaagtcttgcattatgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 83 atgttaatgaatctaggcatatatatgtg 111
|||||||||||||||| ||||||||||||
Sbjct: 104 atgttaatgaatctagacatatatatgtg 76
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 53 gactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||| ||| |||||||||||| ||||||||||||||||
Sbjct: 112 gactttctaacattgcccacattcatatggatgttaatgaatctag 67
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 17 ccacattcatatggatgttaatgaatctag 46
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcata 103
|||||||||||| ||| |||| ||| ||||| |||||||||||||||| ||||
Sbjct: 116 taagactttctagcattgtccatatttatatagatgttaatgaatctagacata 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 101 atatatatgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||| ||||||| ||||||| ||||||||| | |||||||||||
Sbjct: 56 atataaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctag 98
||||||||||||| ||||||||||||||||
Sbjct: 45 ccacattcatatagatgttaatgaatctag 74
Score = 44.1 bits (22), Expect = 7e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||| ||||||| |||| |||| | ||||||||||| ||||||
Sbjct: 50 atgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||||||||||| ||||||||| | | ||||||||| ||||||
Sbjct: 50 atgtgggtaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||||| |||| |||||||||| || |||||||||||||||
Sbjct: 26 taagactttctagcattacccacattcatttagttgttaatgaatctag 74
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatcta 97
|||||||||||| ||| |||| || |||||| |||||||||||||||
Sbjct: 137 taagactttctagcattgtccatatacatatagatgttaatgaatcta 90
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||| ||||||| ||||||||| | ||||||||||| ||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatcta 97
|||||||||||| ||| || |||||||||| |||||||||||||||
Sbjct: 137 taagactttctagcattgcccgcattcatatagatgttaatgaatcta 90
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatata 107
|||||||||||| ||| ||||||||| ||| ||| |||||||||||| || |||||
Sbjct: 26 taagactttctagcattgcccacattcacatagatgctaatgaatctagacacatata 83
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 86/105 (81%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctag--gcatatata 107
|||||||||||| ||| ||||||| ||| |||||||||||||||| ||||| |
Sbjct: 26 taagactttctagcattgcccacatttttatggatgttaatgaatctagaaacatatgaa 85
Query: 108 tgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
|||||| ||||||| ||||||||| | ||||||| ||| ||||||
Sbjct: 86 tgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| |||||||||||||||||
Sbjct: 45 ccacattcatatttatgttaatgaatctag 74
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatat 106
||||||||||||| |||||||||||||| | |||||||
Sbjct: 45 ccacattcatatagatgttaatgaatctggacatatat 82
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaat 94
|||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 26 taagactttctagcattgcccacattcatatagatgttaatgaat 70
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| ||||||||| | |||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttacattatgaaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| ||||||||| | |||||||||||
Sbjct: 97 atgtgggcaatgctagaaagtcttacattatgaaacgga 135
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 58 tctaatattatccacattcatatatatgttaatgaatctag 98
||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 101 tctaacattttccacattcatattgatgttaatgaatctag 61
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatata 105
|||||||||||| |||||||||||||||| ||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctagacatata 81
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatcta 97
||||||||||||| |||||||||||||||
Sbjct: 45 ccacattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 68 tccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 119 tccacattcatataggtgttaatgaatctagacatctatat 79
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatata 107
||||||||||||| ||||||||||||||| |||||||
Sbjct: 45 ccacattcatataggtgttaatgaatctagatatatata 83
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||||| |||| ||| ||||||||| ||||||| ||||||||
Sbjct: 26 taagactttctagcattaaccatattcatatagatgttaacgaatctag 74
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||||| ||| |||||| |||||| ||||||||||||||||
Sbjct: 126 taagactttctagcattgcccacatacatatagatgttaatgaatctag 78
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 101 atatatatgtgggtaatgctaaaaagtcttataatatgaaacgga 145
|||| |||||||| ||||||| ||||||||| | |||||||||||
Sbjct: 96 atatgtatgtgggcaatgctagaaagtcttacattatgaaacgga 140
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatatg 109
|||||||||||| ||| ||| |||||| || |||||||||||||||| ||||| ||||
Sbjct: 26 taagactttctagcattgcccatattcatttagatgttaatgaatctagacatatgtatg 85
Query: 110 t 110
|
Sbjct: 86 t 86
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 68 tccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 14 tccacattcatataggtgttaatgaatctagacatctatat 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatata 107
||||||||||||| ||||||||||||||| |||||||
Sbjct: 88 ccacattcatataggtgttaatgaatctagatatatata 50
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 70 cacattcatatatatgttaatgaatctaggcatata 105
||||||||||| ||||| ||||||||||| ||||||
Sbjct: 97 cacattcatatttatgtcaatgaatctagacatata 62
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatcta 97
|||||||||||| ||| |||||| |||||| |||||||||||||||
Sbjct: 26 taagactttctagcattgcccacatacatataaatgttaatgaatcta 73
Score = 44.1 bits (22), Expect = 7e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatatg 109
|||||||||||| ||| ||| |||||| || ||| |||||||||||| ||||| ||||
Sbjct: 137 taagactttctagcattgcccaaattcatttagatgctaatgaatctagacatatgtatg 78
Query: 110 tg 111
||
Sbjct: 77 tg 76
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 73 attcatatatatgttaatgaatctaggcatatatat 108
|||||||| |||||||||||||||| |||||||||
Sbjct: 49 attcatattgatgttaatgaatctagacatatatat 84
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 68 tccacattcatatatatgttaatgaatctaggcata 103
|||||||||||||| |||||||| ||||||| ||||
Sbjct: 98 tccacattcatatagatgttaataaatctagacata 63
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
||||||| |||| |||||||||||||||| |||||||||
Sbjct: 45 ccacatttatattgatgttaatgaatctagacatatatat 84
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||| || ||||||||||||| |||||||||
Sbjct: 45 ccacattcatattgatattaatgaatctagacatatatat 84
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||| ||| |||||||||||| |||||||||
Sbjct: 118 ccacattcatattgatggtaatgaatctagacatatatat 79
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 71 acattcatatatatgttaatgaatctag 98
||||||||||| ||||||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatctag 74
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 101 atatatatgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||||||||| ||||||| || | |||| | ||||||||||| ||||||
Sbjct: 107 atatatatgtgggcaatgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||| || ||||||||||||| |||||||||
Sbjct: 45 ccacattcatattgatattaatgaatctagacatatatat 84
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 73 attcatatatatgttaatgaatctaggcatatatat 108
|||||||| |||||||||||||||| |||||||||
Sbjct: 112 attcatattgatgttaatgaatctagacatatatat 77
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
||||||||||| |||||||||||||||| |||||||||
Sbjct: 122 ccacattcatagtgatgttaatgaatctagacatatatat 83
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 73 attcatatatatgttaatgaatctaggcatatatat 108
|||||||| |||||||||||||||| |||||||||
Sbjct: 49 attcatattgatgttaatgaatctagacatatatat 84
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
||||||| |||| |||||||||||||||| |||||||||
Sbjct: 45 ccacatttatattaatgttaatgaatctagacatatatat 84
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||| ||| |||||||||||| |||||||||
Sbjct: 118 ccacattcatattgatgctaatgaatctagacatatatat 79
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
||||||||||| |||||||||||||||| |||||||||
Sbjct: 45 ccacattcatagtgatgttaatgaatctagacatatatat 84
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 109 gtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||| ||||||| ||||||||||| |||||| |||| ||||||
Sbjct: 115 gtgggcaatgctagaaagtcttatattatgaagcggaggaagta 158
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatat 108
|||||||||||| ||||||||||||||| |||||||||
Sbjct: 118 ccacattcatattgttgttaatgaatctagacatatatat 79
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatatgtg 111
|||||||||||| ||||||||||||||| ||||| ||||||
Sbjct: 117 ccacattcatattgatgttaatgaatctaaacatatgtatgtg 75
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||| ||||||||| | |||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttacattatgaaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacgga 145
||||||| ||||||||||||| ||| | |||||||||||
Sbjct: 97 atgtgggcaatgctaaaaagttttacattatgaaacgga 135
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaat 94
||||||||||||| ||||||||||||
Sbjct: 102 ccacattcatatagatgttaatgaat 77
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctaggcatat 104
||||||||| ||||||| | |||||||| || |||||||||||| ||| |||||
Sbjct: 26 taagactttttaatattgcctacattcatttagatgttaatgaatatagacatat 80
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 68 tccacattcatatatatgttaatgaatctag 98
||||||||||||| ||||||||||||||||
Sbjct: 44 tccacattcatattaatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02018216.1/16118-16192 39946:Oryza sativa
Indica Group
Length = 75
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 115 aatgctaaaaagtcttataatatgaaacgga 145
|||||||||| |||||||||||||||||||
Sbjct: 34 aatgctaaaagatcttataatatgaaacgga 64
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 64 attatccacattcatatatatgttaatgaatctag 98
|||| ||| ||||||||| ||||||||||||||||
Sbjct: 123 attacccatattcatatagatgttaatgaatctag 89
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatct 96
|||| ||||||| |||| |||||||| || || ||||||||||||||
Sbjct: 97 taaggctttctagtattgtccacatttatttagatgttaatgaatct 51
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 73 attcatatatatgttaatgaatctaggcatatatatgtg 111
|||||| || |||||||||||||||| ||||| ||||||
Sbjct: 114 attcatttagatgttaatgaatctagacatatgtatgtg 76
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 110 tgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
|||| ||||||||||||||||| | | ||||||||| ||||||
Sbjct: 116 tgggcaatgctaaaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 115 aatgctaaaaagtcttataatatgaaacggatgaagtat 153
||||||| ||||||||||| ||| ||||||| |||||||
Sbjct: 42 aatgctagaaagtcttatattataaaacggaggaagtat 4
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 115 aatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||| ||||||||||| ||||| ||||| ||||||
Sbjct: 68 aatgctagaaagtcttatattatgagacggaggaagta 105
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 48 tataagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||| | |||||| ||| |||||||||||| ||||||||||||||||
Sbjct: 116 tataagtcattctaacatttcccacattcatattgatgttaatgaatctag 66
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 68 tccacattcatatatatgttaatgaatctag 98
||||||||||||| ||||||||||||||||
Sbjct: 44 tccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 73 attcatatatatgttaatgaatctaggcata 103
||||||||| |||||||||||||||| ||||
Sbjct: 49 attcatatagatgttaatgaatctagacata 79
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa
Indica Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 63 tattatccacattcatatatatgttaatgaatcta 97
|||| ||||||||||||| |||||||||||||||
Sbjct: 96 tattttccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 65/78 (83%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 70 cacattcatatatatgttaatgaatctaggcatatat--atgtgggtaatgctaaaaagt 127
||||||||||| |||||||||||||||| | |||| ||||||| ||||||| || |
Sbjct: 89 cacattcatattgatgttaatgaatctagatagatatgaatgtgggaaatgctagaatga 30
Query: 128 cttataatatgaaacgga 145
|||||| | |||||||||
Sbjct: 29 cttatattgtgaaacgga 12
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatat 106
|||||||||||| ||||||||| |||||| |||||||
Sbjct: 89 ccacattcatattgatgttaatggatctagacatatat 52
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 46 ccacattcatattgatgttaatgaatctag 75
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 68 tccacattcatatatatgttaatgaatcta 97
||||||||||||| |||||||||||||||
Sbjct: 101 tccacattcatattgatgttaatgaatcta 72
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 116 atgctaaaaagtcttataatatgaaacgga 145
|||||||||||||||| | |||||||||||
Sbjct: 41 atgctaaaaagtcttacattatgaaacgga 12
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 119 ctaaaaagtcttataatatgaaacggatgaagta 152
||||||||||||||| |||| |||||| ||||||
Sbjct: 80 ctaaaaagtcttatattatggaacggaggaagta 113
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 68 tccacattcatatatatgttaatgaatcta 97
||||||||||||| |||||||||||||||
Sbjct: 44 tccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctaggcatatatatgt 110
|||||||||||| ||| |||| ||||||| |||||||||||
Sbjct: 106 ccacattcatattgatgctaataaatctagacatatatatgt 65
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 68 tccacattcatatatatgttaatgaatctaggcatatatatg 109
|||||||||||||| ||| |||||||| || ||||||||||
Sbjct: 119 tccacattcatatagatgctaatgaatttaaacatatatatg 78
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 68 tccacattcatatatatgttaatgaatcta 97
||||||||||||| |||||||||||||||
Sbjct: 44 tccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 116 atgctaaaaagtcttataatatgaaacgga 145
|||||||||||||||||| | |||||||||
Sbjct: 41 atgctaaaaagtcttatattgtgaaacgga 12
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 44.1 bits (22), Expect = 7e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 107 atgtgggtaatgctaaaaagtcttataatatgaaacggatgaagta 152
||||| ||||||||| ||||||||||| | || |||||| ||||||
Sbjct: 93 atgtgagtaatgctagaaagtcttatattgtggaacggaggaagta 138
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag 74
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 109 ccacattcatattgatgttaatgaatctag 80
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 73 attcatatatatgttaatgaatctag 98
||||||||| ||||||||||||||||
Sbjct: 114 attcatatagatgttaatgaatctag 89
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 115 aatgctaaaaagtcttataatatgaaacggatgaagta 152
|||||||||| | |||||| ||||||||||||| ||||
Sbjct: 54 aatgctaaaatgacttatattatgaaacggatggagta 91
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 106 ccacattcatattgatgttaatgaatctag 77
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 118 ccacattcatattgatgttaatgaatctag 89
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 73 attcatatatatgttaatgaatctaggcatatat 106
|||||||| |||||||||||||||| |||||||
Sbjct: 105 attcatattgatgttaatgaatctagacatatat 72
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa
Japonica Group
Length = 160
Score = 44.1 bits (22), Expect = 7e-04
Identities = 43/49 (87%), Gaps = 2/49 (4%)
Strand = Plus / Plus
Query: 50 taagactttctaatattatccacattcatatatatgttaatgaatctag 98
|||||||||||| ||| ||||||| ||||| ||||||||||||||||
Sbjct: 26 taagactttctaccattgtccacat--atatagatgttaatgaatctag 72
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 115 aatgctaaaaagtcttataatatgaaacggatgaagta 152
||||||||||||||||| | | ||||||||| ||||||
Sbjct: 119 aatgctaaaaagtcttacattgtgaaacggaggaagta 156
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 69 ccacattcatatatatgttaatgaatctag 98
|||||||||||| ||||||||||||||||
Sbjct: 96 ccacattcatattgatgttaatgaatctag 67
