miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00253;mir-101;AADN02012457.1/2688-2762 9031:Gallus gallus
(chicken)
Length = 75
Score = 109 bits (55), Expect = 7e-24
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 12 tgccctggctcagttatcacagtgctgatgctgtccattccaaaggtacagtactgtgac 71
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 60
Query: 72 aactgaaggatggca 86
|||||||||||||||
Sbjct: 61 aactgaaggatggca 75
>RF00253;mir-101;BAAF04077052.1/5406-5332 8090:Oryzias latipes
(Japanese medaka)
Length = 75
Score = 83.8 bits (42), Expect = 4e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 12 tgccctggctcagttatcacagtgctgatgctgtccattccaaaggtacagtactgtgac 71
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgccctggttcagttatcacagtgctgatgctgtccccatagaaggtacagtactgtgat 60
Query: 72 aactgaaggatggc 85
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>RF00253;mir-101;AADN02066347.1/1501-1427 9031:Gallus gallus
(chicken)
Length = 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 53 aaaggtacagtactgtgacaactgaaggatgg 84
|||||||||||||||||| |||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaagaatgg 73
