miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00780;MIR477;AARH01006483.1/19991-20076 3694:Populus
          trichocarpa
          Length = 86

 Score =  170 bits (86), Expect = 2e-42
 Identities = 86/86 (100%)
 Strand = Plus / Plus

                                                                      
Query: 10 gaagcttccgatctccctcaaaggcttcctctataattgccttacatgatggcattagtg 69
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gaagcttccgatctccctcaaaggcttcctctataattgccttacatgatggcattagtg 60

                                    
Query: 70 gactcctttggggagatggagagctt 95
          ||||||||||||||||||||||||||
Sbjct: 61 gactcctttggggagatggagagctt 86




>RF00780;MIR477;AASG02000511.1/21598-21512 3988:Ricinus communis
          (castor bean)
          Length = 87

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 10 gaagcttccgatctccctcaaaggcttcc 38
          ||||||||| |||||||||||||||||||
Sbjct: 1  gaagcttccaatctccctcaaaggcttcc 29