miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00779;MIR474;AARH01007997.1/197004-197141 3694:Populus
trichocarpa
Length = 138
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 57 aaggatatggggtctggctccacagcaagacctaattgcatttg 100
|||||||| |||||||||||| | |||||||| ||| |||||||
Sbjct: 45 aaggatattgggtctggctccgcggcaagacccaatagcatttg 2
>RF00779;MIR474;AARH01001850.1/103516-103618 3694:Populus
trichocarpa
Length = 103
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 35 aattgccttgcccaccagactgaaggatatggggtctggctccacagcaagacctaattg 94
||||| ||||||| ||| || |||||||| |||||||||||| |||| ||| | ||| |
Sbjct: 67 aattgtcttgccctccaaacccaaggatattgggtctggctccgcagccagatccaatag 8
Query: 95 catttg 100
||||||
Sbjct: 7 catttg 2
>RF00779;MIR474;AARH01000156.1/133887-133786 3694:Populus
trichocarpa
Length = 102
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 29 agactcaattgccttgcccaccagac 54
|||||||||||||||||||| |||||
Sbjct: 70 agactcaattgccttgcccatcagac 45
