miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00779;MIR474;AARH01000399.1/153109-153004 3694:Populus
trichocarpa
Length = 106
Score = 63.9 bits (32), Expect = 2e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 24 agacccaagcgacttgggtctgacagtcatgc 55
||||||||||||||||||||||||||||||||
Sbjct: 47 agacccaagcgacttgggtctgacagtcatgc 16
>RF00779;MIR474;AARH01005488.1/207731-207648 3694:Populus
trichocarpa
Length = 84
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 20 tgccagacccaagcgacttgggtctg 45
||||||||||||||||||||||||||
Sbjct: 56 tgccagacccaagcgacttgggtctg 31
>RF00779;MIR474;AARH01008010.1/88342-88424 3694:Populus
trichocarpa
Length = 83
Score = 46.1 bits (23), Expect = 5e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 20 tgccagacccaagcgacttgggtctgacagtcatgccag 58
||||||||||||||| ||||||| || |||| |||||||
Sbjct: 55 tgccagacccaagcgccttgggtgtggcagttatgccag 17
>RF00779;MIR474;AARH01002522.1/205439-205323 3694:Populus
trichocarpa
Length = 117
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ttgggtctgacagtcatgccag 58
||||||||||||||||||||||
Sbjct: 12 ttgggtctgacagtcatgccag 33
