miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00870;mir-423;AAIY01635034.1/442-362 9371:Echinops telfairi
          (small Madagascar hedgehog)
          Length = 81

 Score =  155 bits (78), Expect = 1e-37
 Identities = 78/78 (100%)
 Strand = Plus / Plus

                                                                      
Query: 10 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 69
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4  aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 63

                            
Query: 70 ccctcagtcttgcttcct 87
          ||||||||||||||||||
Sbjct: 64 ccctcagtcttgcttcct 81




>RF00870;mir-423;AAGU02429216.1/1470-1554 9785:Loxodonta africana
          (African savanna elephant)
          Length = 85

 Score = 56.0 bits (28), Expect = 8e-08
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 11 agttaggctgaggggcagagagcgagactttt 42
          ||||||| ||||||||||||||||||||||||
Sbjct: 5  agttagggtgaggggcagagagcgagactttt 36