miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00270;SNORD61;AAFC03028609.1/18530-18459 9913:Bos taurus
(cattle)
Length = 72
Score = 56.0 bits (28), Expect = 6e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 41 gctatgatgactttgattgcattgatca 68
||||||||||||||||||||||||||||
Sbjct: 1 gctatgatgactttgattgcattgatca 28
>RF01170;snoU61;AAGW01145968.1/1005-932 9986:Oryctolagus cuniculus
(rabbit)
Length = 74
Score = 52.0 bits (26), Expect = 9e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 39 gagctatgatgactttgattgcattgatca 68
|||||||||||| |||||||||||||||||
Sbjct: 1 gagctatgatgaatttgattgcattgatca 30
>RF01170;snoU61;AAWR02034100.1/59890-59817 9796:Equus caballus
(horse)
Length = 74
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 40 agctatgatgactttgattgcattgat 66
||||||||||| |||||||||||||||
Sbjct: 2 agctatgatgaatttgattgcattgat 28
>RF01170;snoU61;ABDC01371259.1/3999-3928 30608:Microcebus murinus
(gray mouse lemur)
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 40 agctatgatgactttgattgcattgatca 68
||||||||||| |||||||||| ||||||
Sbjct: 2 agctatgatgaatttgattgcactgatca 30
>RF01170;snoU61;AAGW01177627.1/1824-1751 9986:Oryctolagus
cuniculus (rabbit)
Length = 74
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 40 agctatgatgactttgattgcattgatca 68
||||||||||| ||| |||||||||||||
Sbjct: 2 agctatgatgaatttaattgcattgatca 30
