miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00005;tRNA;ABRN01265479.1/3279-3206 :
Length = 74
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 81 tccctggtggtccagggattaagactctgcgcttc 115
||||||||||||||| | |||||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagactctgcgcttc 35
>RF00005;tRNA;ABRN01448805.1/2079-2007 :
Length = 73
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 81 tccctggtggtccagggattaagactctgcgct 113
||||||||||||||| | |||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagactctgcgct 33
>RF00005;tRNA;AAFC03126781.1/12778-12706 :
Length = 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 81 tccctggtggtccagggattaagactctgcgcttc 115
||||||||||||||| | ||||||||||| |||||
Sbjct: 1 tccctggtggtccagtggttaagactctgtgcttc 35
>RF00005;tRNA;AAFC03000111.1/16416-16344 :
Length = 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 81 tccctggtggtccagggattaagactctgcgcttc 115
|||||||||||| || ||||||||||||| |||||
Sbjct: 1 tccctggtggtctagtgattaagactctgtgcttc 35
>RF00005;tRNA;ABRN01284012.1/8153-8074 :
Length = 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 81 tccctggtggtccagggattaagactctgcgcttc 115
||||||||||||||| | ||||||||||| |||||
Sbjct: 1 tccctggtggtccagtggttaagactctgtgcttc 35
>RF00005;tRNA;ABRN01009833.1/336-408 :
Length = 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 81 tccctggtggtccagggattaagactctgcgcttc 115
||||||||||||||| | |||||||||||| ||||
Sbjct: 1 tccctggtggtccagtggttaagactctgcacttc 35
>RF00005;tRNA;ABRN01090762.1/1144-1071 :
Length = 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 81 tccctggtggtccagggattaagactctgcgcttc 115
||||||||||||||| | |||||| ||||||||||
Sbjct: 1 tccctggtggtccagcggttaagattctgcgcttc 35
>RF00005;tRNA;ABRN01439919.1/2547-2475 :
Length = 73
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 tccctggtggtccagggattaagactctgc 110
||||||||||||||| | ||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagactctgc 30
>RF00005;tRNA;ABRN01192690.1/1261-1334 :
Length = 74
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 81 tccctggtggtccagggattaagactctgcgctt 114
||||||||||||||| | ||| ||||||||||||
Sbjct: 1 tccctggtggtccagtggttaggactctgcgctt 34
