miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00638;MIR159;EU946960.1/247-441 4577:Zea mays
          Length = 195

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 1   ttggactgaagggtgctccctcctccc 27
           |||||||||||||||||||||||||||
Sbjct: 164 ttggactgaagggtgctccctcctccc 190




>RF00638;MIR159;ABXC01001681.1/23904-24102 4558:Sorghum bicolor
           (sorghum)
          Length = 199

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 1   ttggactgaagggtgctccctcctccc 27
           |||||||||||||||||||||||||||
Sbjct: 168 ttggactgaagggtgctccctcctccc 194




>RF00638;MIR159;AACV01000479.1/66279-66476 39947:Oryza sativa
           Japonica Group
          Length = 198

 Score = 52.0 bits (26), Expect = 9e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 1   ttggactgaagggtgctccctcctcc 26
           ||||||||||||||||||||||||||
Sbjct: 167 ttggactgaagggtgctccctcctcc 192