miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00638;MIR159;EU955086.1/295-527 4577:Zea mays
Length = 233
Score = 65.9 bits (33), Expect = 4e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcctgatcca 33
|||||||||||||||||||||||||||||||||
Sbjct: 201 tttggattgaagggagctctgcatcctgatcca 233
>RF00638;MIR159;ABXC01001787.1/21430-21187 4558:Sorghum bicolor
(sorghum)
Length = 244
Score = 65.9 bits (33), Expect = 4e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcctgatcca 33
|||||||||||||||||||||||||||||||||
Sbjct: 212 tttggattgaagggagctctgcatcctgatcca 244
>RF00638;MIR159;EU869041.1/17-203 39947:Oryza sativa Japonica Group
Length = 187
Score = 56.0 bits (28), Expect = 4e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcctgatcc 32
||||||||||||||||||||||||| ||||||
Sbjct: 155 tttggattgaagggagctctgcatcttgatcc 186
>RF00638;MIR159;AP008207.1/17678032-17678305 39947:Oryza sativa
Japonica Group
Length = 274
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatc 25
|||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatc 266
