miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 268 bits (135), Expect = 2e-71
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 22 tttgtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgta 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttgtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgta 60
Query: 82 gttacattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttggga 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttacattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttggga 120
Query: 142 tggagggaatactac 156
|||||||||||||||
Sbjct: 121 tggagggaatactac 135
>RF00906;MIR1122;EF540321.1/52965-52831 4571:Triticum turgidum
Length = 135
Score = 220 bits (111), Expect = 5e-57
Identities = 129/135 (95%)
Strand = Plus / Minus
Query: 22 tttgtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgta 81
||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||
Sbjct: 135 tttgtaccccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatcta 76
Query: 82 gttacattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttggga 141
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 75 gttacattttagtgttagatacatctttatctaaacaaatgtaagacaagaattttggga 16
Query: 142 tggagggaatactac 156
|||||||||||||||
Sbjct: 15 tggagggaatactac 1
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaagaattttgggatggaggg 148
||||||||||||||| || |||||| ||||||||||||||||||| ||||||
Sbjct: 76 tagatacatccgtatttagacaaatttaagacaagaattttgggacggaggg 127
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 143 bits (72), Expect = 1e-33
Identities = 105/116 (90%)
Strand = Plus / Plus
Query: 24 tgtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagt 83
||||||||||||||||||||||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 3 tgtactccctccgtcccaaaattcttgtcttagatttgtctaaatacggatgtatcaagt 62
Query: 84 tacattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgg 139
|| ||||||| ||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 63 cacgttttagtattagatacatccgtatctaggcaaatctaagacaagaattttgg 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 99 gatacatccgtatctaaacaaatgtaagacaagaattttgggatggaggga 149
||||||||||||| || |||||| ||||||||||||||||||| |||||||
Sbjct: 58 gatacatccgtatttagacaaatctaagacaagaattttgggacggaggga 8
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium piliferum
Length = 135
Score = 137 bits (69), Expect = 6e-32
Identities = 110/124 (88%)
Strand = Plus / Plus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
||||||||||||||||||||| ||||| || ||||||||||||| |||||||| |||| |
Sbjct: 5 tactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatctagtca 64
Query: 86 cattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgga 145
||||||||||||| |||| | ||||||||||||| |||||| |||||||||||| |||
Sbjct: 65 tgttttagtgttagacacattcatatctaaacaaatctaagacnagaattttgggacgga 124
Query: 146 ggga 149
||||
Sbjct: 125 ggga 128
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaagaattttgggatggaggga 149
||||||||||||||| || |||||| || |||||||||||||||| |||||||
Sbjct: 60 tagatacatccgtatttagacaaatctatgacaagaattttgggacggaggga 8
Score = 56.0 bits (28), Expect = 2e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgt 76
||||||||||||||||||||| | |||||| |||||| || ||||| ||||
Sbjct: 131 tactccctccgtcccaaaattctngtcttagatttgtttagatatgaatgt 81
>RF00906;MIR1122;EU660895.1/53244-53110 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 135 bits (68), Expect = 2e-31
Identities = 110/124 (88%)
Strand = Plus / Minus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
|||||||||| |||||||||| |||||||| ||||||||||||| ||||||||| ||| |
Sbjct: 131 tactccctccatcccaaaattcttgtcttagatttgtctaaatacggatgtatgaagtca 72
Query: 86 cattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgga 145
|||||||| ||| |||||| ||||||| ||||||||||||||||||||||| || |||
Sbjct: 71 tattttagtattaaatacatatgtatctagacaaatgtaagacaagaattttgagacgga 12
Query: 146 ggga 149
||||
Sbjct: 11 ggga 8
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 100 atacatccgtatctaaacaaatgtaagacaagaattttgggatggaggga 149
|||||||||||| || |||||| |||||||||||||||||||||||||||
Sbjct: 79 atacatccgtatttagacaaatctaagacaagaattttgggatggaggga 128
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtcta 65
||||||||||||| ||||||| |||||||| |||||||||
Sbjct: 5 tactccctccgtctcaaaattcttgtcttacatttgtcta 44
>RF00906;MIR1122;AY853252.1/217307-217173 4513:Hordeum vulgare
Length = 135
Score = 131 bits (66), Expect = 4e-30
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
|||||||||| || ||||||| | ||||||||||| ||||||||||||||||| |||| |
Sbjct: 5 tactccctccatctcaaaattctggtcttaaatttctctaaatatggatgtatctagtca 64
Query: 86 cattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgga 145
| ||||||||||||||||||||||||||| | |||| ||||||||||||||||| |||
Sbjct: 65 cgttttagtgttagatacatccgtatctagataaatcctagacaagaattttgggacgga 124
Query: 146 gg 147
||
Sbjct: 125 gg 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaagaattttgggatggaggga 149
||||||||||| ||| || | |||| |||||| ||||||||| ||||||||||
Sbjct: 60 tagatacatccatatttagagaaatttaagaccagaattttgagatggaggga 8
>RF00906;MIR1122;AM932686.1/57613-57747 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 121 bits (61), Expect = 3e-27
Identities = 103/117 (88%)
Strand = Plus / Plus
Query: 25 gtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtt 84
|||||||||| ||||||||||| |||||||| ||||||||| ||| |||||||| |||
Sbjct: 4 gtactccctcggtcccaaaattcttgtcttagatttgtctagatacggatgtatcaagtc 63
Query: 85 acattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttggga 141
||||||| || ||||||||||| ||||||| |||||| ||||||||||| |||||||
Sbjct: 64 acattttcgtattagatacatctgtatctagacaaatctaagacaagaaatttggga 120
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 99 gatacatccgtatctaaacaaatgtaagacaagaattttgggatggagggaatact 154
|||||||||||||||| |||||| ||||||||||||||||||| |||||| ||||
Sbjct: 58 gatacatccgtatctagacaaatctaagacaagaattttgggaccgagggagtact 3
>RF00906;MIR1122;AY887089.1/1801-1936 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 121 bits (61), Expect = 3e-27
Identities = 110/125 (88%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
||||||||||||| ||||||| |||| || |||||||||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtctcaaaattattgttttgaatttgtctagatatggatgtatctagtta 64
Query: 86 cattttagt-gttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgg 144
||||||||| ||| || ||||| |||||||| | || ||||||||||||||||||| ||
Sbjct: 65 cattttagtatttaaatgcatccatatctaaaaacatctaagacaagaattttgggacgg 124
Query: 145 aggga 149
|||||
Sbjct: 125 aggga 129
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 26 tactccctccgtcccaaaattgttgtctta 55
||||||||||||||||||||| ||||||||
Sbjct: 132 tactccctccgtcccaaaattcttgtctta 103
>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
Length = 135
Score = 119 bits (60), Expect = 1e-26
Identities = 108/124 (87%)
Strand = Plus / Plus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
|||||| || ||||||||||| |||||||| |||| |||||||| |||||||| | | |
Sbjct: 5 tactccttctgtcccaaaattcttgtcttagatttttctaaatagggatgtatcaactca 64
Query: 86 cattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgga 145
| ||||||| |||||||||||| |||||| |||||| ||||||||||||||||||| |||
Sbjct: 65 cgttttagtattagatacatccatatctagacaaatctaagacaagaattttgggacgga 124
Query: 146 ggga 149
||||
Sbjct: 125 ggga 128
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 78
||||||||||||||||||||| |||||||| ||||||||| ||||||||||||
Sbjct: 131 tactccctccgtcccaaaattcttgtcttagatttgtctagatatggatgtat 79
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 113 bits (57), Expect = 9e-25
Identities = 109/125 (87%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
||||||||||||||||||||| |||||||| ||||||||| ||||| |||||| |||| |
Sbjct: 5 tactccctccgtcccaaaattcttgtcttacatttgtctagatatgaatgtatctagtca 64
Query: 86 cattttagt-gttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgg 144
| ||||||| || |||||||| | |||||||||| ||||||||||||||||||| ||
Sbjct: 65 cgttttagtattttgatacatctatttctaaacaaacttaagacaagaattttgggacgg 124
Query: 145 aggga 149
|||||
Sbjct: 125 aggga 129
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaagaattttgggatggaggga 149
||||||||| | |||||| |||||||||||||||||||||||||| |||||||
Sbjct: 60 tagatacattcatatctagacaaatgtaagacaagaattttgggacggaggga 8
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 99.6 bits (50), Expect = 1e-20
Identities = 102/118 (86%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 25 gtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtt 84
|||||||||||||||||||||| |||||||| |||||| || ||||| |||||| ||||
Sbjct: 4 gtactccctccgtcccaaaattattgtcttagatttgtttagatatgaatgtatctagtc 63
Query: 85 acattttagt-gttagatacatccgtatctaaacaaatgtaagacaagaattttggga 141
| ||||||| ||||||||||| | |||||||||| |||||||||||||||||||
Sbjct: 64 aagttttagtaattagatacatctatttctaaacaaagttaagacaagaattttggga 121
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaagaattttgggatggagggaatacta 155
||||||||| | ||||||||||||| |||||||| |||||||||| ||||||| |||||
Sbjct: 60 tagatacattcatatctaaacaaatctaagacaataattttgggacggagggagtacta 2
>RF00906;MIR1122;EU660901.1/93085-92951 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 97.6 bits (49), Expect = 5e-20
Identities = 106/125 (84%)
Strand = Plus / Plus
Query: 25 gtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtt 84
|||||| |||||||| ||||| |||||||||||||||||||| | | |||||| |||
Sbjct: 4 gtactcgctccgtcctgaaattcttgtcttaaatttgtctaaagacgaatgtatcaagtc 63
Query: 85 acattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgg 144
|| |||| || ||||||||||||||||||| ||||| || ||||||||||||||| ||
Sbjct: 64 acgtttttgtattagatacatccgtatctagacaaagctacaacaagaattttgggacgg 123
Query: 145 aggga 149
|||||
Sbjct: 124 aggga 128
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 25 gtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 78
|||||||||||||||||||||| |||| || |||||||| ||| ||||||||
Sbjct: 132 gtactccctccgtcccaaaattcttgttgtagctttgtctagatacggatgtat 79
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 106/125 (84%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
|||||||||||| |||||||| |||||||| |||||| || ||||| |||||| ||||||
Sbjct: 5 tactccctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatctagtta 64
Query: 86 cattttagt-gttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgg 144
||||||| ||||||||||| | |||| ||||| ||||||||||||||| ||| ||
Sbjct: 65 agttttagtatttagatacatcaatttctagacaaagctaagacaagaattttaggacgg 124
Query: 145 aggga 149
|||||
Sbjct: 125 aggga 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaagaattttgggatggaggga 149
||||||||| | ||||||||||||| ||||||||||||||||| | |||||||
Sbjct: 60 tagatacattcatatctaaacaaatctaagacaagaattttggaacggaggga 8
>RF00906;MIR1122;DQ145528.1/676-542 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 135
Score = 87.7 bits (44), Expect = 5e-17
Identities = 97/112 (86%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 36 gtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagttacattttagt- 94
||||||||||| |||||||| ||||||||||||||| |||||| |||| | |||||||
Sbjct: 15 gtcccaaaattcttgtcttagatttgtctaaatatgaatgtatctagtcatgttttagta 74
Query: 95 gttagatacatccgtatctaaacaaatgtaagacaagaattttgggatggag 146
|||||||||||| | |||| || ||| ||||||||||||||||||| ||||
Sbjct: 75 tttagatacatccatttctagac-aatttaagacaagaattttgggacggag 125
Score = 60.0 bits (30), Expect = 1e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 25 gtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 78
|||||| ||||||||||||||| |||||||||| ||||||| | ||||||||||
Sbjct: 132 gtactctctccgtcccaaaattcttgtcttaaa-ttgtctagaaatggatgtat 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaagaattttggga 141
||||||||| | ||| || |||||| |||||||||||||||||||
Sbjct: 60 tagatacattcatatttagacaaatctaagacaagaattttggga 16
>RF00906;MIR1122;AF254799.1/46723-46588 4513:Hordeum vulgare
Length = 136
Score = 83.8 bits (42), Expect = 8e-16
Identities = 106/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 25 gtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtt 84
||||||| |||||||||||||| |||||||||||||||||| ||||| |||||| ||||
Sbjct: 4 gtactccttccgtcccaaaattcttgtcttaaatttgtctatatatgaatgtatctagtc 63
Query: 85 acattttagtgtt-agatacatccgtatctaaacaaatgtaagacaagaattttgggatg 143
| |||||| || |||||||||| | | || |||| ||||||||||||||||| | |
Sbjct: 64 atggtttagtatttagatacatccatgtgtagacaatgctaagacaagaattttggaacg 123
Query: 144 gaggga 149
||||||
Sbjct: 124 gaggga 129
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaagaattttgggatggagggaatactac 156
||||||||| | ||| || |||||| ||||||||||||||||||| ||| ||| ||||||
Sbjct: 60 tagatacattcatatatagacaaatttaagacaagaattttgggacggaaggagtactac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 78
|||||||||||| |||||||| |||||||| ||||||| | ||||||||||
Sbjct: 132 tactccctccgttccaaaattcttgtcttagcattgtctacacatggatgtat 80
>RF00906;MIR1122;DQ890004.1/48-183 4513:Hordeum vulgare
Length = 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 105/125 (84%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
|||| ||||||| |||||||| |||||||| |||||| || ||||| |||||| ||||||
Sbjct: 132 tactacctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatctagtta 73
Query: 86 cattttagtgtt-agatacatccgtatctaaacaaatgtaagacaagaattttgggatgg 144
||||||| || ||||||||| | |||| ||||| ||||||||||||||| ||| ||
Sbjct: 72 agttttagtatttagatacatcaatttctagacaaagctaagacaagaattttaggacgg 13
Query: 145 aggga 149
|||||
Sbjct: 12 aggga 8
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaagaattttgg 139
||||||||| | ||||||||||||| |||||||||||||||||
Sbjct: 77 tagatacattcatatctaaacaaatctaagacaagaattttgg 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 78
|||||||||||||| |||||| |||||||| |||||||| | || |||||||
Sbjct: 5 tactccctccgtcctaaaattcttgtcttagctttgtctagaaattgatgtat 57
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
|||||||||||| ||||| | ||||||| ||||||||| ||| |||||||| |||
Sbjct: 131 tactccctccgttccaaattacttgtcttggatttgtctagatacggatgtatctagact 72
Query: 86 cattttagtgttagatacatccgtatctaaacaaatgtaagacaag 131
|||||||||| |||||| |||||||||| |||||| |||||||||
Sbjct: 71 cattttagtgctagatatctccgtatctagacaaatctaagacaag 26
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaagaattttgggatggaggga 149
|||||||||||||||||| |||||| |||||||| | ||||| | |||||||
Sbjct: 76 tagatacatccgtatctagacaaatccaagacaagtaatttggaacggaggga 128
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagt 83
|||||||||||||||||| || |||||||| ||||||||| ||||| |||||||||||
Sbjct: 5 tactccctccgtcccaaacttcttgtcttagatttgtctagatatgaatgtatgtagt 62
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgta 77
||||||||||||||||||||| |||||||| |||||||| | |||||||||
Sbjct: 138 tactccctccgtcccaaaattcttgtcttaggtttgtctataaatggatgta 87
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 100 atacatccgtatctaaacaaatgtaagacaagaattttgggatggaggga 149
|||||| | |||||| |||||| ||||||||||| ||||||| |||||||
Sbjct: 57 atacattcatatctagacaaatctaagacaagaagtttgggacggaggga 8
>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
Length = 104
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 89 tttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatggaggg 148
|||||||||||||||||||||||||| | |||| ||||||||| |||||||| |||||
Sbjct: 37 tttagtgttagatacatccgtatctagataaatctaagacaagctttttgggacggaggt 96
Query: 149 aata 152
||||
Sbjct: 97 aata 100
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 67.9 bits (34), Expect = 5e-11
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 48 ttgtcttaaatttgtctaaatatggatgtatgtagttacattttagtgttagatacatcc 107
|||||||||||||||||| ||| |||||||| ||| |||||||||| |||| | |||
Sbjct: 27 ttgtcttaaatttgtctagatacggatgtatctagactcattttagtgctagacatatct 86
Query: 108 gtatctaaacaaatgtaagacaagaattttgggatggaggga 149
||||||| |||||| |||||||| | ||||| | |||||||
Sbjct: 87 gtatctagacaaatcgaagacaagtaatttggaacggaggga 128
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaag 131
|||||||||||||||||| |||||| |||||||||
Sbjct: 60 tagatacatccgtatctagacaaatttaagacaag 26
>RF00906;MIR1122;AY853252.1/33762-33628 4513:Hordeum vulgare
Length = 135
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 97 tagatacatccgtatctaaacaaatgtaagacaagaattttgggatggagggaatact 154
||||||||| ||||||||||||||| |||| ||||||||||| || ||||||| ||||
Sbjct: 60 tagatacattcgtatctaaacaaatataaggcaagaattttgagacggagggagtact 3
Score = 67.9 bits (34), Expect = 5e-11
Identities = 105/126 (83%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 25 gtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtt 84
|||||||||||||| ||||||| ||| |||| |||||| || ||| | |||||| ||||
Sbjct: 4 gtactccctccgtctcaaaattcttgccttatatttgtttagatacgaatgtatctagtc 63
Query: 85 acattttagtgtt-agatacatccgtatctaaacaaatgtaagacaagaattttgggatg 143
| |||| ||| || |||||||||| |||| ||||| ||||||||||||||||| |||
Sbjct: 64 aaattt-agtatttagatacatccagttctagacaaagctaagacaagaattttggaatg 122
Query: 144 gaggga 149
||||||
Sbjct: 123 gaggga 128
>RF00906;MIR1122;EU626553.1/30213-30109 4572:Triticum urartu
Length = 105
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 105 tccgtatctaaacaaatgtaagacaagaattttgggatggaggga 149
|||||||||||| |||| ||||||||||||||||||| |||||||
Sbjct: 54 tccgtatctaaataaatctaagacaagaattttgggacggaggga 98
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 26 tactccctccgtcccaaaattgttgtcttaaattt 60
||||||||||||||||||||| |||||||| ||||
Sbjct: 101 tactccctccgtcccaaaattcttgtcttagattt 67
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 102 acatccgtatctaaacaaatgtaagacaagaattttgg 139
||||||||||||| | |||| |||||||||||||||||
Sbjct: 54 acatccgtatctagataaatctaagacaagaattttgg 17
>RF00906;MIR1122;AY465427.2/1983-1848 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 24 tgtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 78
|||||||||||||| ||||||| |||| ||| |||||||||||| | ||||||||
Sbjct: 3 tgtactccctccgttccaaaatagttgacttgaatttgtctaaacacggatgtat 57
>RF00906;MIR1122;DJ023121.1/176-54 4513:Hordeum vulgare
Length = 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatg 71
|||||||||||||| |||||| |||||||| ||||||||| |||||
Sbjct: 5 tactccctccgtcctaaaattcttgtcttagatttgtctagatatg 50
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 109 tatctaaacaaatgtaagacaagaattttgggatggaggga 149
|||||| |||||| ||||||||||||||| ||| |||||||
Sbjct: 48 tatctagacaaatctaagacaagaattttaggacggaggga 8
>RF00906;MIR1122;X73528.1/281-181 4565:Triticum aestivum (bread
wheat)
Length = 101
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 108 gtatctaaacaaatgtaagacaagaattttgggatggaggga 149
||||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 53 gtatctagacaaatctaagacaagaattttaagatggaggga 94
>RF00906;MIR1122;AP009567.1/9225-9090 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 96 ttagatacatccgtatctaaacaaatgtaagacaagaatttt 137
|||||||||| | |||||| |||||| |||||||||||||||
Sbjct: 61 ttagatacattcatatctagacaaatctaagacaagaatttt 20
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgt 62
|||||||||||||||||||| ||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataattgtcttaactttgt 65
>RF00906;MIR1122;EU730902.1/94507-94383 15368:Brachypodium
distachyon
Length = 125
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 78
|||||||||||| ||| |||| |||||| ||||||| | ||| ||||||||||
Sbjct: 5 tactccctccgttccataatttttgtctcaaatttgcccaaaaatggatgtat 57
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 ttgtactccctccgtcccaaaat 45
|||||||||||||||||||||||
Sbjct: 104 ttgtactccctccgtcccaaaat 82
>RF00906;MIR1122;EU862571.1/695-592 98113:Hordeum murinum subsp.
glaucum
Length = 104
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 89 tttagtgttagatacatccgtatctaaacaaatgtaagacaag 131
||||| |||||||||||||||||||| | |||| | |||||||
Sbjct: 68 tttagcgttagatacatccgtatctagataaatcttagacaag 26
>RF00906;MIR1122;AY083681.1/2468-2333 4498:Avena sativa (oat)
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 24 tgtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 78
||||||||||||||||| ||| | ||| | ||||||||||||| |||||||||
Sbjct: 134 tgtactccctccgtcccgaaaaggatgtatcaaatttgtctaaacttggatgtat 80
>RF00906;MIR1122;AACV01021306.1/37655-37776 39947:Oryza sativa
Japonica Group
Length = 122
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 ttgtactccctccgtcccaaaat 45
|||||||||||||||||||||||
Sbjct: 121 ttgtactccctccgtcccaaaat 99
>RF00906;MIR1122;AAAA02006215.1/494-605 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 ttgtactccctccgtcccaaaat 45
|||||||||||||||||||||||
Sbjct: 111 ttgtactccctccgtcccaaaat 89
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 ttgtactccctccgtcccaaaat 45
|||||||||||||||||||||||
Sbjct: 111 ttgtactccctccgtcccaaaat 89
>RF00906;MIR1122;AP008209.1/27314174-27314047 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 ttgtactccctccgtcccaaaat 45
|||||||||||||||||||||||
Sbjct: 2 ttgtactccctccgtcccaaaat 24
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum
(bread wheat)
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 29 tccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 78
||||||||||||||||| |||||| ||||||| ||| ||||||||||
Sbjct: 8 tccctccgtcccaaaatgagtgtcttggatttgtccaaaaatggatgtat 57
>RF00906;MIR1122;EU660894.1/143713-143848 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 136
Score = 44.1 bits (22), Expect = 7e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 24 tgtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgta 77
|||||||||||||| ||||||| ||| ||| ||||||| ||| |||||||||
Sbjct: 134 tgtactccctccgttccaaaatacttgacttccatttgtccaaaaatggatgta 81
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgtactccctccgtcccaaaat 45
||||||||||||||||||||||
Sbjct: 103 tgtactccctccgtcccaaaat 82
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 25 gtactccctccgtcccaaaattgttgtcttaaatttgt 62
||||||||||||||||||||| |||||||| |||||
Sbjct: 102 gtactccctccgtcccaaaataagtgtcttaactttgt 65
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgtactccctccgtcccaaaat 45
||||||||||||||||||||||
Sbjct: 120 tgtactccctccgtcccaaaat 99
>RF00906;MIR1122;AAAA02012151.1/19064-18908 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgtactccctccgtcccaaaat 45
||||||||||||||||||||||
Sbjct: 155 tgtactccctccgtcccaaaat 134
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgtactccctccgtcccaaaat 45
||||||||||||||||||||||
Sbjct: 154 tgtactccctccgtcccaaaat 133
>RF00906;MIR1122;AACV01003177.1/25234-25117 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tgtactccctccgtcccaaaat 45
||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtcccaaaat 24
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgtactccctccgtcccaaaat 45
||||||||||||||||||||||
Sbjct: 110 tgtactccctccgtcccaaaat 89
