miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;CAAP02003948.1/3813-3690 29760:Vitis vinifera
Length = 124
Score = 242 bits (122), Expect = 9e-64
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 1 agtagttgtagggcttctctccttctggcaggagatggcaatagattatcctttgtggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agtagttgtagggcttctctccttctggcaggagatggcaatagattatcctttgtggct 62
Query: 61 tatctccggtgttgattaacttccaatgacccgccaaaggagagttgccctgtgactact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tatctccggtgttgattaacttccaatgacccgccaaaggagagttgccctgtgactact 122
Query: 121 tc 122
||
Sbjct: 123 tc 124
>RF00445;mir-399;DQ063659.1/70-185 3702:Arabidopsis thaliana (thale
cress)
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgactacttc 122
||||||||||||||||||||| ||| ||||
Sbjct: 86 gccaaaggagagttgccctgtcactgcttc 115
>RF00445;mir-399;BABK01105304.1/403-505 34305:Lotus japonicus
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtg 114
||||||||||||||||||||||
Sbjct: 74 gccaaaggagagttgccctgtg 95
