miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;ABXC01004203.1/1754-1629 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 89.7 bits (45), Expect = 9e-18
Identities = 110/133 (82%), Gaps = 14/133 (10%)
Strand = Plus / Minus
Query: 8 agcctgcctctggtagccaaggatgacttgcctacatggtctcgctagttccggttgttg 67
||||||||| ||||||||||||||||||||||||||||| | || |||||||||||
Sbjct: 119 agcctgcctttggtagccaaggatgacttgcctacatggcattgcgagttccggttg--- 63
Query: 68 catgcatgccactatgccagtcctgctgggtttgtgggcggtctccttggctagcctgag 127
|||| |||||| | |||| |||||||||||||| ||||||||||||||||
Sbjct: 62 ----catg-------gccagttcagctgagtttgtgggcggtcaccttggctagcctgag 14
Query: 128 tggctcttgcctg 140
|||||||||||||
Sbjct: 13 tggctcttgcctg 1
>RF00865;MIR169_5;ABXC01004204.1/1140-1015 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 89.7 bits (45), Expect = 9e-18
Identities = 110/133 (82%), Gaps = 14/133 (10%)
Strand = Plus / Minus
Query: 8 agcctgcctctggtagccaaggatgacttgcctacatggtctcgctagttccggttgttg 67
||||||||| |||||||||||||||||||||||||| || || || |||||||||||
Sbjct: 119 agcctgcctttggtagccaaggatgacttgcctacacggccttgcgagttccggttg--- 63
Query: 68 catgcatgccactatgccagtcctgctgggtttgtgggcggtctccttggctagcctgag 127
|||| |||||| | | ||||||||||||||||| ||||||||||||||||
Sbjct: 62 ----catg-------gccagttcagttgggtttgtgggcggtcaccttggctagcctgag 14
Query: 128 tggctcttgcctg 140
|||||||||||||
Sbjct: 13 tggctcttgcctg 1
>RF00645;MIR169_2;ABXC01004203.1/1636-1748 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 77.8 bits (39), Expect = 4e-14
Identities = 104/127 (81%), Gaps = 14/127 (11%)
Strand = Plus / Plus
Query: 8 agcctgcctctggtagccaaggatgacttgcctacatggtctcgctagttccggttgttg 67
||||||||| ||||||||||||||||||||||||||||| | || ||||||| ||||
Sbjct: 1 agcctgcctttggtagccaaggatgacttgcctacatggcattgcgagttccg---gttg 57
Query: 68 catgcatgccactatgccagtcctgctgggtttgtgggcggtctccttggctagcctgag 127
|||| |||||| | |||| |||||||||||||| ||||||||||||||||
Sbjct: 58 catg-----------gccagttcagctgagtttgtgggcggtcaccttggctagcctgag 106
Query: 128 tggctct 134
|||||||
Sbjct: 107 tggctct 113
>RF00645;MIR169_2;ABXC01004204.1/1022-1134 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 77.8 bits (39), Expect = 4e-14
Identities = 104/127 (81%), Gaps = 14/127 (11%)
Strand = Plus / Plus
Query: 8 agcctgcctctggtagccaaggatgacttgcctacatggtctcgctagttccggttgttg 67
||||||||| |||||||||||||||||||||||||| || || || ||||||| ||||
Sbjct: 1 agcctgcctttggtagccaaggatgacttgcctacacggccttgcgagttccg---gttg 57
Query: 68 catgcatgccactatgccagtcctgctgggtttgtgggcggtctccttggctagcctgag 127
|||| |||||| | | ||||||||||||||||| ||||||||||||||||
Sbjct: 58 catg-----------gccagttcagttgggtttgtgggcggtcaccttggctagcctgag 106
Query: 128 tggctct 134
|||||||
Sbjct: 107 tggctct 113
>RF00865;MIR169_5;AACV01009625.1/5578-5722 39947:Oryza sativa
Japonica Group
Length = 145
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 8 agcctgcctctggtagccaaggatgacttgccta 41
||||||||||||||||||||||||||||||||||
Sbjct: 138 agcctgcctctggtagccaaggatgacttgccta 105
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 108 gtctccttggctagcctgagtggctcttg 136
|||||||||||||||||||||||||||||
Sbjct: 33 gtctccttggctagcctgagtggctcttg 5
>RF00645;MIR169_2;AP008210.1/19428619-19428750 39947:Oryza sativa
Japonica Group
Length = 132
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 8 agcctgcctctggtagccaaggatgacttgccta 41
||||||||||||||||||||||||||||||||||
Sbjct: 1 agcctgcctctggtagccaaggatgacttgccta 34
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 108 gtctccttggctagcctgagtggctct 134
|||||||||||||||||||||||||||
Sbjct: 106 gtctccttggctagcctgagtggctct 132
>RF00865;MIR169_5;ABXC01005011.1/62536-62662 4558:Sorghum bicolor
(sorghum)
Length = 127
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 ctgcctctggtagccaaggatgacttgccta 41
||||||||| |||||||||||||||||||||
Sbjct: 117 ctgcctctgatagccaaggatgacttgccta 87
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gtctccttggctagcctgagtggc 131
||||||||||||||||||||||||
Sbjct: 33 gtctccttggctagcctgagtggc 10
>RF00865;MIR169_5;CAAP02000122.1/24661-24522 29760:Vitis vinifera
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 16 tctggtagccaaggatgacttgccta 41
||||||||||||||||||||||||||
Sbjct: 126 tctggtagccaaggatgacttgccta 101
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 15 ctctggtagccaaggatgacttgcct 40
||||||||||||||||||||||||||
Sbjct: 119 ctctggtagccaaggatgacttgcct 94
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 15 ctctggtagccaaggatgacttgcct 40
||||||||||||||||||||||||||
Sbjct: 134 ctctggtagccaaggatgacttgcct 109
>RF00865;MIR169_5;ABXC01005012.1/10458-10330 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 16 tctggtagccaaggatgacttgccta 41
||||||||||||||||||||||||||
Sbjct: 112 tctggtagccaaggatgacttgccta 87
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 102 tgggcggtctccttggctagcctgagtggctctt 135
||||| ||||||||||||||||||| || |||||
Sbjct: 39 tgggcagtctccttggctagcctgactgactctt 6
>RF00865;MIR169_5;ABXC01005012.1/7179-7306 4558:Sorghum bicolor
(sorghum)
Length = 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 16 tctggtagccaaggatgacttgccta 41
||||||||||||||||||||||||||
Sbjct: 114 tctggtagccaaggatgacttgccta 89
>RF00865;MIR169_5;AAAA02026107.1/14351-14478 39946:Oryza sativa
Indica Group
Length = 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 102 tgggcggtctccttggctagcctgagtggctctt 135
||||| ||||||||||||||||||||||| ||||
Sbjct: 39 tgggcagtctccttggctagcctgagtggttctt 6
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 ctctggtagccaaggatgacttgcct 40
||||| ||||||||||||||||||||
Sbjct: 114 ctctgatagccaaggatgacttgcct 89
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa Japonica
Group
Length = 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 15 ctctggtagccaaggatgacttgcct 40
||||||||||||||||||||||||||
Sbjct: 114 ctctggtagccaaggatgacttgcct 89
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 15 ctctggtagccaaggatgacttgcct 40
||||||||||||||||||||||||||
Sbjct: 127 ctctggtagccaaggatgacttgcct 102
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 102 tgggcggtctccttggctagcctgagtg 129
||||| ||||||||||||||||||||||
Sbjct: 39 tgggcagtctccttggctagcctgagtg 12
>RF00645;MIR169_2;CAAP02000122.1/24529-24655 29760:Vitis vinifera
Length = 127
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctggtagccaaggatgacttgccta 41
||||||||||||||||||||||||||
Sbjct: 8 tctggtagccaaggatgacttgccta 33
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 ctctggtagccaaggatgacttgcct 40
||||||||||||||||||||||||||
Sbjct: 8 ctctggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABXC01005012.1/7295-7185 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctggtagccaaggatgacttgccta 41
||||||||||||||||||||||||||
Sbjct: 4 tctggtagccaaggatgacttgccta 29
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 ctctggtagccaaggatgacttgcct 40
||||||||||||||||||||||||||
Sbjct: 10 ctctggtagccaaggatgacttgcct 35
>RF00645;MIR169_2;ABXC01005012.1/10344-10452 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctggtagccaaggatgacttgccta 41
||||||||||||||||||||||||||
Sbjct: 4 tctggtagccaaggatgacttgccta 29
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa
Japonica Group
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 ctctggtagccaaggatgacttgcct 40
||||||||||||||||||||||||||
Sbjct: 8 ctctggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica
Group
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 ctctggtagccaaggatgacttgcct 40
||||||||||||||||||||||||||
Sbjct: 3 ctctggtagccaaggatgacttgcct 28
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 102 tgggcggtctccttggctagcctgagtg 129
||||| ||||||||||||||||||||||
Sbjct: 91 tgggcagtctccttggctagcctgagtg 118
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tctggtagccaaggatgacttgcct 40
|||||||||||||||||||||||||
Sbjct: 129 tctggtagccaaggatgacttgcct 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 108 gtctccttggctagcctgagtggctct 134
|||||||||||||||||||| ||||||
Sbjct: 33 gtctccttggctagcctgagcggctct 7
>RF00645;MIR169_2;ABIM01014270.1/4373-4157 3649:Carica papaya
(papaya)
Length = 217
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tctggtagccaaggatgacttgcct 40
|||||||||||||||||||||||||
Sbjct: 9 tctggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABXC01005012.1/1911-1797 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 12 tgcctctggtagccaaggatgacttgcct 40
|||||||| ||||||||||||||||||||
Sbjct: 1 tgcctctgatagccaaggatgacttgcct 29
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 gtctccttggctagcctgagtggc 131
||||||||||||||||||||||||
Sbjct: 89 gtctccttggctagcctgagtggc 112
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tctggtagccaaggatgacttgcct 40
|||||||||||||||||||||||||
Sbjct: 9 tctggtagccaaggatgacttgcct 33
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 108 gtctccttggctagcctgagtggctct 134
|||||||||||||||||||| ||||||
Sbjct: 105 gtctccttggctagcctgagcggctct 131
>RF00645;MIR169_2;AAAA02026107.1/14467-14357 39946:Oryza sativa
Indica Group
Length = 111
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 102 tgggcggtctccttggctagcctgagtgg 130
||||| |||||||||||||||||||||||
Sbjct: 79 tgggcagtctccttggctagcctgagtgg 107
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctctggtagccaaggatgacttgcct 40
||||| ||||||||||||||||||||
Sbjct: 4 ctctgatagccaaggatgacttgcct 29
>RF00865;MIR169_5;ABIM01001939.1/16104-16248 3649:Carica papaya
(papaya)
Length = 145
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgccta 41
||||||||||||||||||||||||
Sbjct: 127 tggtagccaaggatgacttgccta 104
>RF00865;MIR169_5;ABIM01022203.1/1875-2012 3649:Carica papaya
(papaya)
Length = 138
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcctacatg 45
||||||||||||||||||||||| ||||
Sbjct: 119 tggtagccaaggatgacttgcctgcatg 92
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgccta 41
||||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgccta 101
>RF00865;MIR169_5;AASG02003632.1/6210-6338 3988:Ricinus communis
(castor bean)
Length = 129
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 16 tctggtagccaaggatgacttgcc 39
||||||||||||||||||||||||
Sbjct: 112 tctggtagccaaggatgacttgcc 89
>RF00865;MIR169_5;AACV01018924.1/12529-12684 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 ctggtagccaaggatgacttgcct 40
||||||||||||||||||||||||
Sbjct: 141 ctggtagccaaggatgacttgcct 118
>RF00645;MIR169_2;ABIM01022203.1/2003-1881 3649:Carica papaya
(papaya)
Length = 123
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcctacatg 45
||||||||||||||||||||||| ||||
Sbjct: 11 tggtagccaaggatgacttgcctgcatg 38
>RF00645;MIR169_2;ABIM01001939.1/16240-16110 3649:Carica papaya
(papaya)
Length = 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgccta 41
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgccta 34
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgccta 41
||||||||||||||||||||||||
Sbjct: 13 tggtagccaaggatgacttgccta 36
>RF00645;MIR169_2;AASG02003632.1/6331-6216 3988:Ricinus communis
(castor bean)
Length = 116
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tctggtagccaaggatgacttgcc 39
||||||||||||||||||||||||
Sbjct: 11 tctggtagccaaggatgacttgcc 34
>RF00645;MIR169_2;AP008214.1/26806653-26806795 39947:Oryza sativa
Japonica Group
Length = 143
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 ctggtagccaaggatgacttgcct 40
||||||||||||||||||||||||
Sbjct: 9 ctggtagccaaggatgacttgcct 32
>RF00865;MIR169_5;AC189356.2/133226-133094 51351:Brassica rapa
subsp. pekinensis
Length = 133
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 117 tggtagccaaggatgacttgcct 95
>RF00865;MIR169_5;AY551206.1/170-33 3702:Arabidopsis thaliana (thale
cress)
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 123 tggtagccaaggatgacttgcct 101
>RF00865;MIR169_5;AY551202.1/194-30 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 149 tggtagccaaggatgacttgcct 127
>RF00865;MIR169_5;AB016889.1/44658-44824 3702:Arabidopsis thaliana
(thale cress)
Length = 167
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 151 tggtagccaaggatgacttgcct 129
>RF00865;MIR169_5;AY551200.1/193-29 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 149 tggtagccaaggatgacttgcct 127
>RF00865;MIR169_5;AARH01000583.1/30070-29928 3694:Populus
trichocarpa
Length = 143
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 127 tggtagccaaggatgacttgcct 105
>RF00865;MIR169_5;AC216452.1/111365-111227 3694:Populus trichocarpa
Length = 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 123 tggtagccaaggatgacttgcct 101
>RF00865;MIR169_5;AASG02002697.1/24175-24333 3988:Ricinus communis
(castor bean)
Length = 159
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 142 tggtagccaaggatgacttgcct 120
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 135 tggtagccaaggatgacttgcct 113
>RF00865;MIR169_5;CAAP02000001.1/222970-222840 29760:Vitis vinifera
Length = 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 115 tggtagccaaggatgacttgcct 93
>RF00865;MIR169_5;AP008208.1/18658095-18658282 39947:Oryza sativa
Japonica Group
Length = 188
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 19 ggtagccaaggatgacttgccta 41
|||||||||||||||||||||||
Sbjct: 172 ggtagccaaggatgacttgccta 150
>RF00645;MIR169_2;AC189356.2/133102-133219 51351:Brassica rapa
subsp. pekinensis
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcct 31
>RF00645;MIR169_2;AY551202.1/37-188 3702:Arabidopsis thaliana
(thale cress)
Length = 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;AC025808.8/28771-28647 3702:Arabidopsis thaliana
(thale cress)
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcct 31
>RF00645;MIR169_2;AB016889.1/44816-44664 3702:Arabidopsis thaliana
(thale cress)
Length = 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcct 31
>RF00645;MIR169_2;AB016889.1/38604-38454 3702:Arabidopsis thaliana
(thale cress)
Length = 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcct 31
>RF00645;MIR169_2;AARH01001852.1/3885-3676 3694:Populus
trichocarpa
Length = 210
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;AC216452.1/111234-111359 3694:Populus
trichocarpa
Length = 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;AARH01000583.1/29935-30064 3694:Populus
trichocarpa
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;AASG02002697.1/24326-24181 3988:Ricinus communis
(castor bean)
Length = 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;CAAP02000001.1/222847-222964 29760:Vitis
vinifera
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;AP004062.3/84631-84457 39947:Oryza sativa
Japonica Group
Length = 175
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ggtagccaaggatgacttgccta 41
|||||||||||||||||||||||
Sbjct: 10 ggtagccaaggatgacttgccta 32
>RF00865;MIR169_5;AARH01003823.1/108214-108346 3694:Populus
trichocarpa
Length = 133
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcc 39
||||||||||||||||||||||
Sbjct: 117 tggtagccaaggatgacttgcc 96
>RF00865;MIR169_5;AARH01000472.1/145584-145453 3694:Populus
trichocarpa
Length = 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcc 39
||||||||||||||||||||||
Sbjct: 116 tggtagccaaggatgacttgcc 95
>RF00865;MIR169_5;AASG02003632.1/18323-18451 3988:Ricinus communis
(castor bean)
Length = 129
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcc 39
||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;AASG02003632.1/10304-10430 3988:Ricinus communis
(castor bean)
Length = 127
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 18 tggtagccaaggatgacttgcc 39
||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;ABXC01002768.1/23520-23657 4558:Sorghum bicolor
(sorghum)
Length = 138
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 20 gtagccaaggatgacttgccta 41
||||||||||||||||||||||
Sbjct: 117 gtagccaaggatgacttgccta 96
>RF00645;MIR169_2;AARH01003823.1/108339-108220 3694:Populus
trichocarpa
Length = 120
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcc 39
||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AARH01000472.1/145460-145578 3694:Populus
trichocarpa
Length = 119
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcc 39
||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AASG02003632.1/18444-18329 3988:Ricinus communis
(castor bean)
Length = 116
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcc 39
||||||||||||||||||||||
Sbjct: 12 tggtagccaaggatgacttgcc 33
>RF00645;MIR169_2;CAAP02000903.1/14911-14657 29760:Vitis vinifera
Length = 255
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 tggtagccaaggatgacttgcctaca 43
||||||| ||||||||||||||||||
Sbjct: 12 tggtagcgaaggatgacttgcctaca 37
>RF00645;MIR169_2;ABXC01002768.1/23650-23526 4558:Sorghum bicolor
(sorghum)
Length = 125
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 gtagccaaggatgacttgccta 41
||||||||||||||||||||||
Sbjct: 15 gtagccaaggatgacttgccta 36
