miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00017;Metazoa_SRP;AANU01097975.1/8785-8502 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 246 bits (124), Expect = 3e-64
Identities = 224/259 (86%), Gaps = 2/259 (0%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||| | ||||| |||||||||||| |||||||||
Sbjct: 269 ctcttgttgcccaggctggagtgcaatggcgtgatctcggctcactgcaacctctgcctc 210
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 209 ctgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcacctgc 150
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|||||||| | |||| ||||||||| |||||||| || |||| |||||||||||
Sbjct: 149 caccacacacggctaattttttgtatttttagtagagacgcgggttcaccatgttggcca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
|||||||||| |||||||||| ||||| ||||||||||||| |||||||||| ||||||
Sbjct: 89 ggctggtctcgaactcctgacctcaggtgatccacccgcctcagcctcccaaattgctgg 30
Query: 243 aatttcaggtgtgagccac 261
||| ||||||||||||||
Sbjct: 29 gattacaggtgtgagccac 11
Score = 46.1 bits (23), Expect = 6e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||||| |||||||||||| || |||| |||||||||||
Sbjct: 10 ggtggctcacacctgtaatcccagcaatttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AADD01102462.1/25609-25327 9606:Homo sapiens
(human)
Length = 283
Score = 240 bits (121), Expect = 2e-62
Identities = 220/253 (86%), Gaps = 3/253 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || ||| ||||||| |||||||||||| ||||||||||||||||
Sbjct: 260 acccaggctggagtgcagtggcgcgatctcggctcactgcaacctctgcctcctgggttt 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
|||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| |
Sbjct: 200 aagcgattctcctgcttcagcctccagagtagctgggattacaggcacacgccaccatgc 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
||||||| ||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 140 ccagctaattttt-gtatttttagtagagacggggtttcaccatgttggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| |||||||||| ||||| ||||||||| ||| |||||| |||||||||| ||| |||
Sbjct: 81 tcgaactcctgacctcaggtgatccacccacctcagcctcctaaagtgctgggattacag 22
Query: 251 gtgtgagccactg 263
| |||||||||||
Sbjct: 21 gcgtgagccactg 9
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| |||||| ||||||||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttaggaggctgagg 51
>RF00017;Metazoa_SRP;AL157409.16/111858-111575 9606:Homo sapiens
(human)
Length = 284
Score = 234 bits (118), Expect = 1e-60
Identities = 217/250 (86%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||||||||||| |||||||||||| |||||||||||||||| |
Sbjct: 259 cccaggctggagtgcaatggtgcgatctcggctcactgcaacctctgcctcctgggttta 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| ||||||||| ||||||||| |||||||||| | |||| |||| ||
Sbjct: 199 agcgattctcctgcctcagcctcctaagtagctgagattacaggcgcccgcccccacgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||| ||||||||| ||||||| |||||||| ||||||||||||||||||||
Sbjct: 139 tggctaattttt-gtatttttagtagagacagggtttcaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| || ||||||| ||||||||||||||| ||| |||||||||||||||||| ||| ||||
Sbjct: 80 cgaattcctgacctcaggcgatccacccacctcggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 52.0 bits (26), Expect = 1e-05
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;AACZ02200841.1/1373-1090 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 232 bits (117), Expect = 5e-60
Identities = 214/248 (86%), Gaps = 2/248 (0%)
Strand = Plus / Minus
Query: 16 caggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaag 75
|||||| |||| |||||| | |||||||||||||||||| ||||||||||||||||||||
Sbjct: 258 caggctggagtgcaatggcgtgatcttggctcactgcaacctctgcctcctgggttcaag 199
Query: 76 cgattctcctgt--cagcctcccaagtagctgggattacaggcactcgccaccacaccca 133
|||||||||||| |||||||| ||||||| |||||||||| | ||||||||||||||
Sbjct: 198 cgattctcctgtgtcagcctcctgagtagctacgattacaggcgcccgccaccacaccca 139
Query: 134 gctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctca 193
|||| ||||||||| ||||||| |||||||| ||||||||||||||||| ||
Sbjct: 138 gctaatttttggtatttttagtagagactgggtttcaccatgttggccaggctggacttg 79
Query: 194 aactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtg 253
|||||||||| ||||| ||||| ||||||| |||||||||||||||||| ||| |||| |
Sbjct: 78 aactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcg 19
Query: 254 tgagccac 261
||| ||||
Sbjct: 18 tgaaccac 11
Score = 50.1 bits (25), Expect = 4e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||| |||||| ||| ||||||||||||| ||||||| ||||| |||||
Sbjct: 4 gggcgcggtggttcacgcctgtaatcccagcactttgggaggccgaggc 52
>RF00017;Metazoa_SRP;AADB02018056.1/11135-11417 9606:Homo sapiens
(human)
Length = 283
Score = 232 bits (117), Expect = 5e-60
Identities = 219/253 (86%), Gaps = 3/253 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || ||| ||||||| |||||||||||| ||||||||||||||||
Sbjct: 260 acccaggctggagtgcagtggcgcgatctcggctcactgcaacctctgcctcctgggttt 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
|||||||||||||| ||||||||| |||||||| |||||||||||| |||||||| |
Sbjct: 200 aagcgattctcctgcttcagcctccagagtagctgcgattacaggcacacgccaccatgc 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
||||||| ||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 140 ccagctaattttt-gtatttttagtagagacggggtttcaccatgttggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| |||||||||| ||||| ||||||||| ||| |||||| |||||||||| ||| |||
Sbjct: 81 tcgaactcctgacctcaggtgatccacccacctcagcctcctaaagtgctgggattacag 22
Query: 251 gtgtgagccactg 263
| |||||||||||
Sbjct: 21 gcgtgagccactg 9
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| |||||| ||||||||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttaggaggctgagg 51
>RF00017;Metazoa_SRP;AL162732.43/134760-134478 9606:Homo sapiens
(human)
Length = 283
Score = 232 bits (117), Expect = 5e-60
Identities = 219/253 (86%), Gaps = 3/253 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || ||| ||||||| |||||||||||| ||||||||||||||||
Sbjct: 260 acccaggctggagtgcagtggcgcgatctcggctcactgcaacctctgcctcctgggttt 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
|||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| |
Sbjct: 200 aagcgattctcctgcttcagcctccagagtagctgggattacaggcacacgccaccatgc 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
||||||| ||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 140 ccagctaattttt-gtatttttagtagagacggggtttcaccatgttggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
| |||||||||| ||||| ||||||||| ||| |||||| |||||||||| ||| |||
Sbjct: 81 tggaactcctgacctcaggtgatccacccacctcagcctcctaaagtgctgggattacag 22
Query: 251 gtgtgagccactg 263
| |||||||||||
Sbjct: 21 gcgtgagccactg 9
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| |||||| ||||||||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttaggaggctgagg 51
>RF00017;Metazoa_SRP;AACZ02006283.1/44997-45278 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 228 bits (115), Expect = 8e-59
Identities = 223/259 (86%), Gaps = 4/259 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||| |||||| |||||||||||| |||||||||
Sbjct: 267 ctcttgttgcccaggctggagtgcaatggcacgatctcggctcactgcaacctctgcctc 208
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
|||||||||||| ||||||||| ||||||||| |||| |||||||||||| || ||
Sbjct: 207 ctgggttcaagcaattctcctgcctcagcctcctgagtacctgggattacagacatgtgc 148
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||||||||||||||| ||| ||||| |||||||||||||||| |||||||| ||
Sbjct: 147 caccacacccagctaatttt--gtagttttagtagagacggggtttcaccatgttggtca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
|||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 89 ggctggtctcgaactcccgacctcaggtgatccacccgccttggcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccac 261
||| |||| |||||||||
Sbjct: 29 gattacaggcgtgagccac 11
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
||||| ||||||||| ||||||||||||| ||||||| |||||
Sbjct: 4 gggcatggtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;ABBA01075396.1/21166-21447 9606:Homo sapiens
(human)
Length = 282
Score = 228 bits (115), Expect = 8e-59
Identities = 226/263 (85%), Gaps = 4/263 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||| || |||| ||||||||||||||||||
Sbjct: 271 ttcactcttgttgcccaggctggagtgcaatggcgccatctcggctcactgcaaactctg 212
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 211 cctcctgggttcaagcaattctcctgtctcagcctcctgagtagctgggattacaggcat 152
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
|||||||||||| |||| ||||||||| |||||||| |||||| |||||||
Sbjct: 151 gcgccaccacacctggcta--attttgtatttttagtagagacgaggtttctccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
| ||||||||||||||||||||||| ||||| |||| || |||| ||||||||||||||
Sbjct: 93 gtcaggctggtctcaaactcctgacctcaggtgatctgcctgcctcggcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| |||| |||||||||
Sbjct: 33 ctgggattacaggcgtgagccac 11
Score = 58.0 bits (29), Expect = 2e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||||| ||||||||||||| ||||||| ||||| ||||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggccgaggca 53
>RF00017;Metazoa_SRP;ABGA01273660.1/24353-24634 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 224 bits (113), Expect = 1e-57
Identities = 213/248 (85%), Gaps = 2/248 (0%)
Strand = Plus / Minus
Query: 16 caggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaag 75
|||||| |||| || ||| | |||||||||||||||||| ||||||||||||||||||||
Sbjct: 258 caggctggagtgcagtggcgtgatcttggctcactgcaacctctgcctcctgggttcaag 199
Query: 76 cgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacaccca 133
||||||||||||| ||||||| ||||||| |||||||||| | ||||||||||||||
Sbjct: 198 cgattctcctgtctcagcctcctgagtagctatgattacaggcgcccgccaccacaccca 139
Query: 134 gctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctca 193
|||| ||||||||| ||||||| |||||||| ||||||||||||||||| ||
Sbjct: 138 gctaatttttggtatttttagtagagactgggtttcaccatgttggccaggctggacttg 79
Query: 194 aactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtg 253
|||||||||| ||||| ||||| || |||| |||||||||||||||||| ||| |||| |
Sbjct: 78 aactcctgacctcaggtgatccgcctgcctcggcctcccaaagtgctgggattacaggcg 19
Query: 254 tgagccac 261
||||||||
Sbjct: 18 tgagccac 11
Score = 60.0 bits (30), Expect = 4e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||| |||||||||| ||||||||||||| ||||||| ||||| ||||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggca 53
>RF00017;Metazoa_SRP;ABGA01280672.1/9010-8728 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 224 bits (113), Expect = 1e-57
Identities = 224/261 (85%), Gaps = 3/261 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| || |||||| |||| |||||||||||| || ||||||
Sbjct: 268 ctcttgttgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctgtgcctc 209
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
|||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| | |
Sbjct: 208 ctgggttccagcgattctcctgcctcagcctcctgagtagctgggattacaggcacccac 149
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||||||||||||||| |||| |||| |||||||||||||||||||||||| |||
Sbjct: 148 caccacacccagcta-atttttgtatatttagtagagacggggtttcatcatgttgacca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
||||| || |||||||||| ||||| |||||||| ||||||||||||| ||||| |||
Sbjct: 89 ggctgttcctgaactcctgacctcaggtgatccacctgccttggcctcccgaagtgttgg 30
Query: 243 aatttcaggtgtgagccactg 263
||| ||||||||||||||||
Sbjct: 29 gattacaggtgtgagccactg 9
>RF00017;Metazoa_SRP;ABBA01040515.1/51133-50850 9606:Homo sapiens
(human)
Length = 284
Score = 224 bits (113), Expect = 1e-57
Identities = 216/252 (85%), Gaps = 2/252 (0%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| || | ||||||||| |||| |||||||||||| ||| ||||||||||||||
Sbjct: 260 cccaggctggactgcaatggtgcaatctcggctcactgcaacctccgcctcctgggttca 201
Query: 74 agcgattctcctgtcagc--ctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||||| | |||| || || |||||||||||| | ||||||||||
Sbjct: 200 agcgattctcctgtctccacctcctgagcagttgggattacaggggtgcaccaccacacc 141
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||
Sbjct: 140 cagctaattttttgtatttttagtagagacagggtttcaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| ||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacttcaggtgatccacccaccttggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
||||||||||||
Sbjct: 20 tgtgagccactg 9
>RF00017;Metazoa_SRP;CABD01161913.1/1048-767 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 224 bits (113), Expect = 1e-57
Identities = 227/265 (85%), Gaps = 4/265 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||| |||||| | |||||||||| |||||
Sbjct: 271 ttcactcttgttgcccaggctggagtgcaatggctcgatctcgactcactgcaacctctg 212
Query: 61 cctcctgggttcaagcgattctcctgt--cagcctcccaagtagctgggattacaggcac 118
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 211 cctcctgggttcaagcgattctcctgtgtcagcctcctgagtagctgggattacaggcat 152
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
|||||||| ||| |||| ||||||||| |||||||||||||||| |||||||
Sbjct: 151 gcgccaccatgcccggctaatttt--gtatttttagtagagacggggtttcaccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
||||||||||||| |||||||||| |||| ||||| ||| ||| ||||||||||||||
Sbjct: 93 gccaggctggtcttgaactcctgacctcagatgatccgcccacctcggcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccactg 263
|||| ||| |||| |||||||||||
Sbjct: 33 ctgggattacaggcgtgagccactg 9
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;ABGA01146174.1/1083-800 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 216 bits (109), Expect = 3e-55
Identities = 215/252 (85%), Gaps = 2/252 (0%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 260 cccaggctggagtgcagtggtgcgatctcagctcactgcaacctctgcctcctgggttca 201
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|| |||||||||| ||||||||| |||||||||| |||||||| | ||||||||||
Sbjct: 200 agtgattctcctgcctcagcctcctgagtagctggggttacaggcgtgcaccaccacacc 141
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| | ||||||| |||||| ||| |||| |||||||||||
Sbjct: 140 cagctaattttttgtatttttagtggagacggagtttcaccatattggtcaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| ||||| ||||||| |||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
|||||||||||
Sbjct: 20 cgtgagccactg 9
Score = 52.0 bits (26), Expect = 1e-05
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||||| ||||||||||||| ||||||| ||||| |||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggccgaggc 52
>RF00017;Metazoa_SRP;ABGA01107186.1/3562-3279 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 214 bits (108), Expect = 1e-54
Identities = 223/263 (84%), Gaps = 2/263 (0%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
|||||||||||| |||||||| |||| ||||||||| |||| ||||||||||| |||||
Sbjct: 273 ttcactcttattgcccaggctggagtgcaatggtgcaatctcagctcactgcaacctctg 214
Query: 61 cctcctgggttcaagcgattctcctgt--cagcctcccaagtagctgggattacaggcac 118
||||||| ||||||||||||||||||| |||||||| ||||||| |||||| ||| |
Sbjct: 213 cctcctgtgttcaagcgattctcctgtttcagcctcctgagtagctaggattataggtgc 154
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
|||||||| || ||||| ||||||||| ||||||||| |||||| ||| |||
Sbjct: 153 ccgccaccatgcctagctaattttttgtatttttagtagagacggagtttcaccatattg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
|||||||||||||| |||||||||| |||| |||||||| |||||||||||||||||||
Sbjct: 93 gccaggctggtctcgaactcctgacctcagatgatccacctgccttggcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| |||| ||||||||
Sbjct: 33 ctgggattacaggcatgagccac 11
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
|||| |||||||||| ||||||||||||| ||||||| |||||
Sbjct: 4 gggcccggtggctcatgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;ABSL01071339.1/163607-163890 9606:Homo sapiens
(human)
Length = 284
Score = 214 bits (108), Expect = 1e-54
Identities = 223/263 (84%), Gaps = 2/263 (0%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
|||||||||||| |||||||| || | || ||| ||||||| |||||||||||| ||| |
Sbjct: 273 ttcactcttattgcccaggctggaatgcagtggcgcgatctcggctcactgcaacctccg 214
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 213 cctcctgggttcaagcgattctcctgtctcaacctcctgagtagctgggattacaggcat 154
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
||||| ||||||||||| ||| |||| |||||||||||||||| ||||||
Sbjct: 153 ctgccactacacccagctaatttttggtacctttagtagagacggggtttcaccatgttc 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
|||||||||||| |||||||||| |||| ||||||||| ||||||||||||||||||
Sbjct: 93 accaggctggtcttgaactcctgaccccaggtgatccacccaccttggcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| |||| |||||||||
Sbjct: 33 ctgggattacaggcgtgagccac 11
Score = 52.0 bits (26), Expect = 1e-05
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||||| ||||||||||||| ||||||| |||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;ABGA01101565.1/843-1127 9601:Pongo abelii
(Sumatran orangutan)
Length = 285
Score = 212 bits (107), Expect = 5e-54
Identities = 217/254 (85%), Gaps = 3/254 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| ||| || |||||| |||||||||||||||| |||||||||||||||||
Sbjct: 262 acccaggctgaagtacagtggtgcagtcttggctcactgcaacctctgcctcctgggttc 203
Query: 73 aagcgattctcctg--tcagcctccca-agtagctgggattacaggcactcgccaccaca 129
|||||||||||||| ||||||||| ||||||||||| ||||| || | ||||||
Sbjct: 202 aagcgattctcctgcctcagcctccttgagtagctgggaccacaggtacgcaccaccatg 143
Query: 130 cccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggt 189
|||||||| ||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 142 cccagctaattttttgtatttttagtagagacggggtttcaccatgttggccaggctggt 83
Query: 190 ctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttca 249
||| ||||||| || ||||| ||||||||| ||| |||||||||||||||||| ||| ||
Sbjct: 82 ctcgaactcctaacctcaggtgatccacccacctcggcctcccaaagtgctgggattaca 23
Query: 250 ggtgtgagccactg 263
|| |||||||||||
Sbjct: 22 ggcgtgagccactg 9
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;AANU01201507.1/1505-1788 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 212 bits (107), Expect = 5e-54
Identities = 213/250 (85%), Gaps = 2/250 (0%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || || |||||||| ||||||| ||| ||||||||| ||||||||
Sbjct: 260 cccaggctggagtgcagtgatgcgatctcggctcaccacaacctctgcctcttgggttca 201
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
|| ||| ||||||| |||||||||||||||||||||||||||||| | |||||| |
Sbjct: 200 cgccattgtcctgtctcagcctcccaagtagctgggattacaggcacccaccaccatgac 141
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||
Sbjct: 140 cagctaattttttgtatttttagtagagacgaggtttcatcatgttggccaggatggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| ||| |||||| ||||| |||| ||||||||||||||||||||||||||| ||| ||||
Sbjct: 80 cgaacccctgacctcaggtgatcaacccgccttggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
|||| |||||||||| ||||||||||||| ||||||| |||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;ABGA01231108.1/3579-3296 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 210 bits (106), Expect = 2e-53
Identities = 221/261 (84%), Gaps = 2/261 (0%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||| | ||||||||||||| |||| |||||||||
Sbjct: 269 ctcttgttgcccaggctggagtgcaatggcgtgatcttggctcacagcaacctctgcctc 210
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
||||||||||||||||||| | ||||||||| |||||||| ||||||||| | | |
Sbjct: 209 atgggttcaagcgattctcccgcctcagcctccttagtagctgagattacaggtgcccac 150
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||||| |||||||| ||||||||| ||||||| |||||||| ||||||||||
Sbjct: 149 caccatgcccagctaattttttgtatttttagtagagacagggtttcactatgttggcca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
|||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||||||||
Sbjct: 89 ggctggtctcgaactcctgatctcaggcgatccaccctcctcggcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccactg 263
||| |||| |||||||||||
Sbjct: 29 gattacaggcgtgagccactg 9
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;ABGA01024319.1/3420-3703 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 210 bits (106), Expect = 2e-53
Identities = 215/253 (84%), Gaps = 2/253 (0%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| |||||| ||||||| |||||||||||| ||| ||||||||||||
Sbjct: 261 acccaggctggagtgcaatggcgcgatctcggctcactgcaagctccgcctcctgggttg 202
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
| || ||||||||| ||||||||| ||||||||||| ||||||||| ||||||||| |
Sbjct: 201 acgccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccacgc 142
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
|| |||| ||| ||||| ||||||| |||||||| |||||||| ||||||||||
Sbjct: 141 ccggctaattttttgtagttttagtagagacagggtttcaccatgttggtcaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| ||||||| || |||| ||||||||| |||||||||||||||||||||| ||| |||
Sbjct: 81 tcgaactcctaaccccaggtgatccacccaccttggcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccactg 263
| |||||||||||
Sbjct: 21 gcgtgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;ABGA01348885.1/2765-2463 9601:Pongo abelii
(Sumatran orangutan)
Length = 303
Score = 208 bits (105), Expect = 7e-53
Identities = 214/252 (84%), Gaps = 2/252 (0%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| || | ||||||||| |||| |||||||||||| ||| ||||||||||||||
Sbjct: 260 cccaggctggactgcaatggtgcaatctcggctcactgcaacctccgcctcctgggttca 201
Query: 74 agcgattctcctgtcagc--ctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||||| | |||| || || ||||||||||||| | ||||||||||
Sbjct: 200 agcaattctcctgtctccacctcctgagcagttgggattacaggcgtgcaccaccacacc 141
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||| | || |||| |||||||| ||||||||||||||||||||
Sbjct: 140 cagctaattttttgtattttcagtacagacagggtttcaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| ||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacttcaggtgatccacccaccttggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
||||||||||||
Sbjct: 20 tgtgagccactg 9
>RF00017;Metazoa_SRP;AADB02013304.1/59422-59704 9606:Homo sapiens
(human)
Length = 283
Score = 208 bits (105), Expect = 7e-53
Identities = 215/252 (85%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||| ||||||| |||||||||||| |||||||||||||||||
Sbjct: 259 cccaggctggagtgcagtggcgcgatctcggctcactgcaacttctgcctcctgggttca 200
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
|| |||| ||||| | |||||||| ||||||||||||||||||| | |||||||||||
Sbjct: 199 agggattatcctgccttagcctcccgagtagctgggattacaggcgcctgccaccacacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| |||||||| |||||||||| ||||| |||| |||||||||||||||
Sbjct: 139 cagctaatttttc-tatttttagtagagacgggctttcaccatggtggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
||||| ||||| ||||| ||||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 80 gaaacttctgacctcaggtgatccacccgcctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
|||||||||||
Sbjct: 20 cgtgagccactg 9
Score = 60.0 bits (30), Expect = 4e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AANU01215466.1/30670-30951 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 208 bits (105), Expect = 7e-53
Identities = 225/265 (84%), Gaps = 4/265 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| ||||| || ||||||||||||| |||| |||||
Sbjct: 271 ttcactcttgttgcccaggctggagtgcaatgatgtgatcttggctcaccgcaacctctg 212
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 211 cctcctgggttcaagcaattctcctgtctcagcctcctgagtagctgggattacaggcat 152
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
|||| || |||||||||| ||||||||| ||||||| ||||||| |||||||
Sbjct: 151 acgccccctcacccagcta--attttgtatttttagtagagacagggtttctccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
| ||||| |||||| ||||||||| ||||| |||| ||| ||||||||||||||||||
Sbjct: 93 gtcaggcgggtctcgaactcctgatctcaggtgatctgcccaccttggcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccactg 263
|||| ||| |||| |||||||||||
Sbjct: 33 ctgggattacaggcgtgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AADC01149088.1/2161-1880 9606:Homo sapiens
(human)
Length = 282
Score = 206 bits (104), Expect = 3e-52
Identities = 215/252 (85%), Gaps = 4/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||| ||||||| ||||||| |||| ||| |||||||| |||||
Sbjct: 258 cccaggctggagtgcaatggagcgatctcggctcacagcaacctccgcctcctgtgttca 199
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| ||
Sbjct: 198 agcgattctcctgtctcagcctcccgagtagctgggattacaggcatgcgccaccacgcc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||| ||||||||| |||||||||||||| ||||||| ||||||||||||
Sbjct: 138 tggctaaattt--gtatttttagtagagacggggtttatccatgttgaccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| ||||||||| ||||| ||||||||| ||| |||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgatctcaggtgatccacccacctcggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
|||||||||||
Sbjct: 20 cgtgagccactg 9
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggccgagg 51
Score = 48.1 bits (24), Expect = 2e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 432 ccagcctggacaacagagcaagactccgtctc 463
||||||||| ||||||||| ||||||||||||
Sbjct: 249 ccagcctgggcaacagagcgagactccgtctc 280
>RF00017;Metazoa_SRP;CABD01145890.1/7107-6825 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 204 bits (103), Expect = 1e-51
Identities = 214/251 (85%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| ||||||||| |||| |||||||||||| ||||||||||||||||
Sbjct: 260 acccaggctggagtgcaatggtgctatctcggctcactgcaacttctgcctcctgggttc 201
Query: 73 aagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacac 130
|||||||||||||||| | ||||| ||| | |||||||||||||| | || ||||||
Sbjct: 200 aagcgattctcctgtctcaacctcctgagtggttgggattacaggcatccaccgccacac 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
|| |||| ||||||||| ||||||| ||||||| |||||||| ||| ||||||
Sbjct: 140 ccggctaattttt-gtatttttagtagagaccaggtttcaccatgttggtcagactggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| |||||||||| ||||| |||||||||||||||||||||||||||||||| ||| |||
Sbjct: 81 tcgaactcctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccac 261
|||||| ||||
Sbjct: 21 gtgtgaaccac 11
>RF00017;Metazoa_SRP;AACZ02050168.1/4927-4631 9598:Pan troglodytes
(chimpanzee)
Length = 297
Score = 202 bits (102), Expect = 4e-51
Identities = 210/246 (85%), Gaps = 3/246 (1%)
Strand = Plus / Minus
Query: 18 ggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcg 77
|||| |||| || ||| ||||||| |||||||||||| ||| |||||||||||||||||
Sbjct: 255 ggctggagtgcagtggcgcgatctcggctcactgcaacctccccctcctgggttcaagcg 196
Query: 78 attctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacccagc 135
||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||
Sbjct: 195 attctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccacgtccagc 136
Query: 136 tannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctcaaa 195
|| ||||||||| ||||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 135 taattttt-gtatttttagtagagacagggtttcatcatgttggtcaggctggtcttgaa 77
Query: 196 ctcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtg 255
|||||||| ||||| ||||||||||||| |||||||||||| |||| ||| |||| |||
Sbjct: 76 ctcctgacctcaggtgatccacccgcctcagcctcccaaagtactgggattacaggcgtg 17
Query: 256 agccac 261
||||||
Sbjct: 16 agccac 11
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||||| ||||||||||||| |||||| |||||||||||
Sbjct: 10 ggtggctcacgcctgtaatcccagtactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;ABBA01070096.1/50826-50542 9606:Homo sapiens
(human)
Length = 285
Score = 202 bits (102), Expect = 4e-51
Identities = 195/226 (86%), Gaps = 3/226 (1%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcc 95
|||| |||||||||||| ||| |||||| |||||||||| ||||||||| |||||||||
Sbjct: 235 atctcggctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcc 176
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
|||||||||||||||||||| ||||||| ||||||||| ||||||||| |
Sbjct: 175 tgagtagctgggattacaggcatctgccaccatacccagctaaatttt-gtatttttaat 117
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
||||||||||||||| ||||||||||||||||||||| |||||||||| ||| | |||||
Sbjct: 116 agagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcaagtgatcc 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|||| ||| |||||||||||||||||| ||| |||| |||||||||
Sbjct: 56 acccacctcggcctcccaaagtgctgggattacaggagtgagccac 11
>RF00017;Metazoa_SRP;ABSL01053133.1/51364-51063 9606:Homo sapiens
(human)
Length = 302
Score = 202 bits (102), Expect = 4e-51
Identities = 213/250 (85%), Gaps = 4/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||| || |||||||||||||||||| ||||||||||||||||||
Sbjct: 258 cccaggctggagtgcaatcatgtgatcttggctcactgcaacctctgcctcctgggttca 199
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|| |||||| ||| ||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 198 agtgattcttctgcctcagccttccaagtagctgggattacaggcatgcgccaccatgcc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| |||||||||||||||| |||||||| |||||||||||
Sbjct: 138 cagcta--attttgtatttttagtagagacggggtttcaccatgttggtcaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||| || ||||| |||||||| |||| ||||||||||||||||| ||| ||||
Sbjct: 80 tgaactcccgatctcaggtgatccacctgcctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 65.9 bits (33), Expect = 7e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggctgaggca 53
>RF00017;Metazoa_SRP;ABGA01045104.1/52289-52570 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 200 bits (101), Expect = 2e-50
Identities = 196/228 (85%), Gaps = 4/228 (1%)
Strand = Plus / Minus
Query: 36 cgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcct 93
||||||| |||||| ||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 236 cgatcttagctcaccacaacctctgcctcctgggttcaagcgattctcctgtctcagcct 177
Query: 94 cccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtattttta 153
|| ||||||||||||||||||||| ||||||||||||| ||| ||||||||
Sbjct: 176 cctaagtagctgggattacaggcatgcgccaccacacccgactaatttta--tattttta 119
Query: 154 ntagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgat 213
||||||| ||||||| || ||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 118 gtagagacagggtttctccacgttggtcaggctggtctcaaactccagacctcaggtgat 59
Query: 214 ccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|||||| |||||||||||||||||||||| ||| |||| |||||||||
Sbjct: 58 ccacccaccttggcctcccaaagtgctgggattacaggcgtgagccac 11
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
|||| |||||||||| ||||||||||||| ||||||| |||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AACZ02112509.1/54888-54606 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 200 bits (101), Expect = 2e-50
Identities = 200/233 (85%), Gaps = 3/233 (1%)
Strand = Plus / Minus
Query: 37 gatcttggctcactgcaaactctgcctcctgggttcaagcgattctcc--tgtcagcctc 94
||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 236 gatcttggctcactgcagcctctgcctcctgggttcaagcaattctcccatgtcagcctc 177
Query: 95 ccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttan 154
||||||||||||||||||||||| | ||||||| |||||||| || ||||||
Sbjct: 176 ccaagtagctgggattacaggcatccaccaccacgcccagcta-attgttgtttttttag 118
Query: 155 tagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatc 214
||||||| |||||||| ||||||||||||||| |||| |||||||| | ||| | ||||
Sbjct: 117 tagagacagggtttcaccatgttggccaggctagtcttgaactcctggcctcaagtgatc 58
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcc 267
|||| |||| ||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 57 cacctgcctcagcctcccaaagtgctgggattacaggtgtgaaccactgtgcc 5
Score = 54.0 bits (27), Expect = 2e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattac 411
|||||| |||| ||| |||||||||||| ||||||| |||||||||||| | |||| ||
Sbjct: 4 gggcacagtggttcacacctgtaatcccagcactttgggaggctgaggcaggtggatcac 63
Query: 412 ttg 414
|||
Sbjct: 64 ttg 66
>RF00017;Metazoa_SRP;AACZ02132279.1/8599-8317 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 200 bits (101), Expect = 2e-50
Identities = 205/240 (85%), Gaps = 3/240 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || |||||| |||||||||||||||| ||| ||||||||||||
Sbjct: 259 cccaggctggagtgcagtggtgcaatcttggctcactgcagcctccacctcctgggttcc 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||
Sbjct: 199 agcgattctcctgtttcagcctcctgagtagctgggattacaggcacgccccaccacacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| |||||||| |||||||||||||||| ||||||||||||| || |||
Sbjct: 139 cagctaattttta-tatttttagtagagacggggtttcaacatgttggccaggatgatct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||||| ||||| | ||||||| ||| ||||||||||||||||| ||| ||||
Sbjct: 80 caaactcctgacctcaggtggtccacccacctcagcctcccaaagtgctgggattacagg 21
Score = 63.9 bits (32), Expect = 3e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| |||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 4 gggcacggcggctcatgcctgtaatcccagcactttgggaggctgagg 51
Score = 50.1 bits (25), Expect = 4e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 566 aggctgcagtgagctatgactgcatcactgcactccagcccgggggaca 614
|||||||||||||| | || |||| ||||||||||||||| ||| ||||
Sbjct: 216 aggctgcagtgagccaagattgcaccactgcactccagcctgggcgaca 264
>RF00017;Metazoa_SRP;ABBA01034440.1/105281-104999 9606:Homo sapiens
(human)
Length = 283
Score = 200 bits (101), Expect = 2e-50
Identities = 200/233 (85%), Gaps = 3/233 (1%)
Strand = Plus / Minus
Query: 37 gatcttggctcactgcaaactctgcctcctgggttcaagcgattctcc--tgtcagcctc 94
||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 236 gatcttggctcactgcagcctctgcctcctgggttcaagcaattctcccatgtcagcctc 177
Query: 95 ccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttan 154
||||||||||||||||||||||| | |||||||||||||||| || ||||||
Sbjct: 176 ccaagtagctgggattacaggcatccaccaccacacccagcta-attgttgtttttttag 118
Query: 155 tagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatc 214
||||||| |||||||| ||||||||||||||| |||| |||||||| | ||| | ||||
Sbjct: 117 tagagacagggtttcaccatgttggccaggctagtcttgaactcctggcctcaagtgatc 58
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcc 267
|||| |||| ||||||||||||||||| ||| |||| |||| ||||||||||
Sbjct: 57 cacctgcctcagcctcccaaagtgctgggattacaggcgtgaaccactgtgcc 5
Score = 61.9 bits (31), Expect = 1e-08
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattac 411
|||||| |||| ||| ||||||||||||| ||||||| |||||||||||| | |||| ||
Sbjct: 4 gggcacagtggttcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcac 63
Query: 412 ttg 414
|||
Sbjct: 64 ttg 66
>RF00017;Metazoa_SRP;ABSL01065897.1/74662-74943 9606:Homo sapiens
(human)
Length = 282
Score = 200 bits (101), Expect = 2e-50
Identities = 224/265 (84%), Gaps = 4/265 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| ||||| ||| |||| |||||||||||| |||||
Sbjct: 271 ttcactcttgttgcccaggctggagtgcaatgatgcaatctcggctcactgcaacctctg 212
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
||| |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||
Sbjct: 211 cctgctgggttcaagcgattctcctgcctcagcctcccgagtagctgggattgcaggcat 152
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
|||||| ||||||||||| ||||||||| ||||||||||||||| |||||||
Sbjct: 151 gcgccacgacacccagcta--attttgtatttttagtagagacggggtttctccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
| ||| |||||||| |||||||||| || ||| |||| ||| ||| |||||||||||||
Sbjct: 93 gtcagtctggtctcgaactcctgacctcgggcaatccgcccacctcagcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccactg 263
||| ||| |||| ||||||||||
Sbjct: 33 ctgagattacaggcatgagccactg 9
>RF00017;Metazoa_SRP;ABGA01305071.1/12411-12129 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 198 bits (100), Expect = 7e-50
Identities = 217/256 (84%), Gaps = 3/256 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| | || || ||| ||||||| |||||||||||| | ||||| |||||||||
Sbjct: 259 cccaggctggtgtgcagtggcgcgatctcggctcactgcaacgtttgcctactgggttca 200
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||||| ||||||||||| ||||||||||||||| | | ||||||||||
Sbjct: 199 agctattctcctgtctcagcctcccaagcagctgggattacaggtgcccaccaccacacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| | ||||||| |||||||||||||||| ||| ||| |||||||||||
Sbjct: 139 cagctaattttt-gcatttttagtagagacggggtttcaccatactggtcaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||| | ||||||||| |||||||||||||||||| ||| ||| ||||
Sbjct: 80 cgaactcctgacctcaagtgatccacccaccttggcctcccaaagtgttgggattacagg 21
Query: 252 tgtgagccactgtgcc 267
||||||||||||||||
Sbjct: 20 tgtgagccactgtgcc 5
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
|||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 4 gggcacagtggctcacacctgtaatcccaacactttgggaggc 46
>RF00017;Metazoa_SRP;ABGA01209219.1/24303-24592 9601:Pongo abelii
(Sumatran orangutan)
Length = 290
Score = 198 bits (100), Expect = 7e-50
Identities = 197/228 (86%), Gaps = 4/228 (1%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcc 95
||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||
Sbjct: 234 atcttggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcc 175
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
||||||||||||||||||||| |||||||||||| ||||| ||||||||| |
Sbjct: 174 tgagtagctgggattacaggcac-cgccaccacaccaagcta-atatttgtatttttagt 117
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
|||||||||||||| | |||| ||||||||||||| |||||||||| ||||| |||||
Sbjct: 116 agagacggggtttcgccgtgttagccaggctggtctggaactcctgacctcaggtgatcc 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
||||||| | |||||||||||||||| ||| |||| || ||||||||
Sbjct: 56 acccgccctaccctcccaaagtgctgggattacaggcgtcagccactg 9
>RF00017;Metazoa_SRP;ABGA01148240.1/6183-5903 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 198 bits (100), Expect = 7e-50
Identities = 187/216 (86%), Gaps = 3/216 (1%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcc 95
||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||
Sbjct: 235 atcttggctcactgcaacctctgcctcctgggttcaagcgattctcctgtctcactctcc 176
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
| || |||||||||| |||||| | ||| |||||||||||| ||||||||| |
Sbjct: 175 cgaggagctgggattgcaggcatgcaccaacacacccagctaatgttt-gtatttttagt 117
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
||||||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||
Sbjct: 116 agagacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatcc 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcagg 251
|||||||| ||||||||||||||||| ||| ||||
Sbjct: 56 acccgcctcagcctcccaaagtgctgggattacagg 21
Score = 50.1 bits (25), Expect = 4e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 368 gcctgtaatcccaacactttgagaggctgaggc 400
||||||||||||| ||||||| |||||||||||
Sbjct: 20 gcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AC023043.8/9773-9490 9606:Homo sapiens (human)
Length = 284
Score = 198 bits (100), Expect = 7e-50
Identities = 221/263 (84%), Gaps = 2/263 (0%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || | |||||| |||| || ||| |||||| |||||||||||| |||||
Sbjct: 273 ttcactcttgttgctcaggctggagtgcagtggcacgatctcggctcactgcaacctctg 214
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
||| || ||||||||||||||||||| | |||||||| || ||||||||||||||||||
Sbjct: 213 cctgctaggttcaagcgattctcctgccttagcctccctagcagctgggattacaggcac 154
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
||||||||| ||||||| ||||||||| |||||||||||||||| ||||||
Sbjct: 153 ccgccaccacgcccagcttattttttgtatttttagtagagacggggtttcactatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
||||||||||||| |||||||||| ||||| ||||||||| ||| ||||||||| | ||
Sbjct: 93 gccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctcccagaatg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| |||| ||||||||
Sbjct: 33 ctgggattacaggcatgagccac 11
>RF00017;Metazoa_SRP;AACZ02059968.1/17527-17812 9598:Pan troglodytes
(chimpanzee)
Length = 286
Score = 196 bits (99), Expect = 3e-49
Identities = 201/235 (85%), Gaps = 4/235 (1%)
Strand = Plus / Minus
Query: 31 tggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tc 88
||||| ||||| ||||||| |||| ||||||||||||||||||||||||||||||| ||
Sbjct: 241 tggtgtgatctcggctcaccgcaacctctgcctcctgggttcaagcgattctcctgcctc 182
Query: 89 agcctcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtat 148
||||||| |||||||||||||||||||| | |||||||||||||||| ||||
Sbjct: 181 agcctcctgagtagctgggattacaggcatgcaccaccacacccagcta--attttgtat 124
Query: 149 ttttantagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcag 208
|||| |||||||||||||| |||| |||| |||||||||||| |||||||||| ||||
Sbjct: 123 ctttagcagagacggggtttcttcattttggtcaggctggtctcgaactcctgacctcag 64
Query: 209 gcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
| |||| ||| |||||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 63 gtgatctgcccaccttggcctcccaaagtgctgggattacaggcatgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 11 gtggctcatgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AADA01312846.1/6480-6783 9598:Pan troglodytes
(chimpanzee)
Length = 304
Score = 196 bits (99), Expect = 3e-49
Identities = 211/250 (84%), Gaps = 2/250 (0%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 260 cccaggctggagtgcaatggtgcaatcttggctcactgcaacctctgcctcctgggttca 201
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|| |||||||||| ||||||||| || ||||||||||| ||| | |||||| ||
Sbjct: 200 agtgattctcctgcctcagcctcctgagcagctgggattataggtgtgcaccaccatgcc 141
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
||||| ||||| ||| ||||||| |||||||| |||||||||||||||||| |
Sbjct: 140 cagctgattttttgtattattagtagagacagggtttcaccatgttggccaggctggtgt 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| |||||||| ||||||||||||||||||||||| ||| |||
Sbjct: 80 cgaactcctgacctcaggtgatccacctgccttggcctcccaaagtgctgggattacaga 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
>RF00017;Metazoa_SRP;ABSL01070932.1/5777-6059 9606:Homo sapiens
(human)
Length = 283
Score = 196 bits (99), Expect = 3e-49
Identities = 213/251 (84%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| |||||| ||||||| ||||||||||| |||||||||| ||||||
Sbjct: 260 acccaggctggagtgcaatggcgcgatctcagctcactgcaacctctgcctcccgggttc 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
|||| ||| ||||| ||||||||| ||||||||||| |||||| |||||||| ||
Sbjct: 200 aagcaattgtcctgcctcagcctcctgagtagctgggactacaggggtccgccaccatac 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||
Sbjct: 140 ccagctaattttt-gtatttttagtagagacggggtttcaccatgttggccagggtggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| |||||||||| ||||| |||||||| |||| |||||||||||||||||| ||| |||
Sbjct: 81 tcgaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccac 261
|||||||||
Sbjct: 21 acgtgagccac 11
Score = 48.1 bits (24), Expect = 2e-04
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
||||||||| | ||||||||||| ||||||| ||||| ||||||
Sbjct: 10 ggtggctcacgtctgtaatcccagcactttgggaggccgaggca 53
>RF00017;Metazoa_SRP;ABBA01008412.1/14888-14606 9606:Homo sapiens
(human)
Length = 283
Score = 196 bits (99), Expect = 3e-49
Identities = 212/250 (84%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || |||||| |||| |||||||||||| ||||||||||||||||||
Sbjct: 259 cccaggctggagtgcactggtgcaatctcggctcactgcaacctctgcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| ||||||||| |||||||||||| ||||| | |||||||| ||
Sbjct: 199 agcgattctcctgtctcagcctcctgagtagctgggatcacaggtgcacgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||| ||||| ||||||| |||||||| ||||||| ||||||||||||
Sbjct: 139 cagctaattttttgta-ttttagtagagacagggtttcaccatgttgcccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| ||||||||| |||||| ||| |||| ||| ||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgagctcaggcaatctacccacctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
||||||||||
Sbjct: 20 tgtgagccac 11
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||||| |||||||||||| ||||||| ||||||||||
Sbjct: 9 cggtggctcacacctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;CABD01106744.1/4098-3795 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 304
Score = 196 bits (99), Expect = 3e-49
Identities = 211/250 (84%), Gaps = 2/250 (0%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||| | ||||||||||||||||| ||||||||||||||||||
Sbjct: 260 cccaggctggagtgcaatggcaccatcttggctcactgcaacctctgcctcctgggttca 201
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|| |||||||||| ||||||||| |||||||||||||| |||| | | |||||| ||
Sbjct: 200 agtgattctcctgcctcagcctcctgagtagctgggattataggcgcgcaccaccatgcc 141
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
||||| ||||| ||| ||||||| |||||||| |||||||||||||||||| |
Sbjct: 140 cagctgattttttgtattattagtagagacagggtttcaccatgttggccaggctggtgt 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| |||||||| |||||||||||||||||| |||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatccacctgccttggcctcccaaagttctgggattacagg 21
Query: 252 tgtgagccac 261
|||| ||||
Sbjct: 20 cgtgatccac 11
>RF00017;Metazoa_SRP;ABGA01033679.1/8172-7892 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 194 bits (98), Expect = 1e-48
Identities = 212/250 (84%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||| || |||| |||||||||||| ||||||||||||||||||
Sbjct: 259 cccaggctggagtgcagtggcgcaatctcggctcactgcaacctctgcctcctgggttca 200
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||||| || |||| |||||||||||||||||||| |||||||||||
Sbjct: 199 agcgattctcctgtctcagactcctttgtagctgggattacaggcacatgccaccacacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||| |||| |||| | |||||||||||||| ||| |||| || ||||||||
Sbjct: 139 tggctaattttt-gtatatttagtggagacggggtttcaccatattggtcaagctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatccacccgccttggcctcccaaagtgctgagattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
>RF00017;Metazoa_SRP;AADA01079699.1/1230-1531 9598:Pan troglodytes
(chimpanzee)
Length = 302
Score = 194 bits (98), Expect = 1e-48
Identities = 212/250 (84%), Gaps = 4/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||| ||||||| ||||||||||| ||| ||||| |||||||
Sbjct: 258 cccaggctggagtgcaatggcgcgatctcagctcactgcaagctccacctcccgggttca 199
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| ||||||||| ||||||||||| |||||| | ||||||||| ||
Sbjct: 198 agccattctcctgcctcagcctcctgagtagctgggactacaggaatccgccaccacgcc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| ||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 138 cggctaatttt--gtatttttagtagagacggggtttcgccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| ||||| |||| ||||||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatccgcccgtcttggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 50.1 bits (25), Expect = 4e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggc 394
||||||||| ||||||||||||| ||||||| |||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AADB02286504.1/252-551 9606:Homo sapiens
(human)
Length = 300
Score = 194 bits (98), Expect = 1e-48
Identities = 217/257 (84%), Gaps = 3/257 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| ||||||||| |||| |||||||||||| || |||||||||||||
Sbjct: 260 acccaggctggagtgcaatggtgcaatctcggctcactgcaaccttcgcctcctgggttc 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
||| |||||||||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 200 aagtgattctcctgtctcagcctcccaagtagctgggattacaggcaccccccaccacac 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
|| ||| |||||||| ||||| |||||||||| || |||| |||||||| |
Sbjct: 140 ccgtctaactttta-tatttttagtagaggcggggtttcaccacattggtcaggctggcc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| |||||||||| || | ||||||||| |||| ||||||||||||||||| ||| |||
Sbjct: 81 tcgaactcctgaccccaagtgatccacccacctttgcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccactgtgcc 267
| ||||||||| |||||
Sbjct: 21 gcgtgagccaccgtgcc 5
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
||||||||||||||| ||||||||||||| ||||||| |||||
Sbjct: 4 gggcacggtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AADB02013261.1/2261994-2261712 9606:Homo
sapiens (human)
Length = 283
Score = 194 bits (98), Expect = 1e-48
Identities = 214/253 (84%), Gaps = 3/253 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || |||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 260 acccaggctggagtgcagtggtgcaatctcggctcactgcaacctctgcctcctgggttc 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
|||||||||||||| ||||||||||||||||||||||||||||| | |||| ||
Sbjct: 200 aagcgattctcctgcctcagcctcccaagtagctgggattacaggtgcctgcca-caatg 142
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
||||||| ||||||||| ||||||| |||||||| |||||||||||||||| ||
Sbjct: 141 ccagctaattttttgtatttttagtagagacagggtttcaccatgttggccaggctgatc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
| |||||||||| ||| | ||||||| |||| |||||||||| |||||| ||| |||
Sbjct: 81 ttgaactcctgacctcaagtcatccacctgcctcagcctcccaaaatgctgggattacag 22
Query: 251 gtgtgagccactg 263
|||||||||||||
Sbjct: 21 gtgtgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattacttg 414
|||||||| |||||||||||| || |||| |||||||||||| | |||| |||||
Sbjct: 11 gtggctcacacctgtaatcccagcattttgggaggctgaggcaggtggatgacttg 66
>RF00017;Metazoa_SRP;AADC01071795.1/582-864 9606:Homo sapiens
(human)
Length = 283
Score = 194 bits (98), Expect = 1e-48
Identities = 212/250 (84%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 259 cccaggctggagtgcagtggagcaatcttggctcactgcaacctctgcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| ||||||||| ||||||||||| ||||| | |||||||| ||
Sbjct: 199 agcaattctcctgcctcagcctcctgagtagctgggaccacaggtgcctgccaccacgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 139 cagctaatttct-gtatttttaatagagacggggtttcaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| ||||| ||| ||| ||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
||||||||
Sbjct: 20 catgagccac 11
Score = 60.0 bits (30), Expect = 4e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 10 ggtggctcatgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AC096762.3/144094-143812 9606:Homo sapiens
(human)
Length = 283
Score = 194 bits (98), Expect = 1e-48
Identities = 198/233 (84%), Gaps = 2/233 (0%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
|||||||| |||||||| |||| || ||| | |||| |||||||||||| |||||||||
Sbjct: 268 ctcttattgcccaggctggagtgcagtggcaccatctcggctcactgcaacctctgcctc 209
Query: 65 ctgggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgc 122
|||||||||||||||||||||||| ||||||| || ||||||||||||||| |||
Sbjct: 208 ctgggttcaagcgattctcctgtctcagcctcctgagaagctgggattacaggtgtgcgc 149
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|||||||||| |||| ||||||||| ||||||| |||||||| |||||||||||
Sbjct: 148 caccacacccggctaattttttgtatttttagtagagacagggtttcaccatgttggcca 89
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaa 235
|||||||||| ||||||||| ||| | ||||||||| |||||||||||||||
Sbjct: 88 ggctggtctcggactcctgacctcaagtgatccacccaccttggcctcccaaa 36
>RF00017;Metazoa_SRP;AANU01208877.1/1615-1335 9544:Macaca mulatta
(rhesus monkey)
Length = 281
Score = 194 bits (98), Expect = 1e-48
Identities = 197/230 (85%), Gaps = 5/230 (2%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagta 101
||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||| |||||
Sbjct: 227 gctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctcctaagta 168
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
|||||||||||||| | | ||||||| ||||||| ||||||||| |||||||
Sbjct: 167 actgggattacaggcgcccaccaccacgtccagctaattt---gtatttttagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
| |||||| ||||||||||||| ||||||| |||||||||| ||||| ||||||||| |
Sbjct: 110 gaagtttcaccatgttggccaggttggtctcgaactcctgacctcaggtgatccaccccc 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcctggc 271
|| ||||||||||||||||| ||| |||| |||||||||||||||||||
Sbjct: 50 ctctgcctcccaaagtgctgggattacaggcgtgagccactgtgcctggc 1
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 353 ggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||| |||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 5 ggcacagtggctcacgcctgtaatcccagcactttgggaggcagagg 51
>RF00017;Metazoa_SRP;ABGA01365159.1/7275-7557 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 192 bits (97), Expect = 4e-48
Identities = 226/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| || | |||||| || |||| ||||||||||| |||||
Sbjct: 272 ttcactcttgttgcccaggctggaatgcaatggcgcaatctctgctcactgcaacctctg 213
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| |
Sbjct: 212 cctcctgggtttaagcgattctcctgcctcagcctcccgagtagctgggattacagatgc 153
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
||||||||| |||||||| ||||||||| || ||||||||||||| ||||||
Sbjct: 152 ccgccaccacgcccagcta-atttttgtatttttagtacagacggggtttcactatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
|||||||||||||| |||||||||| |||||| ||||| || ||| ||||||||| |||
Sbjct: 93 gccaggctggtctcgaactcctgacctcaggcaatccatccccctcagcctcccaaggtg 34
Query: 239 ctggaatttcaggtgtgagccactgtgcc 267
|||| ||| |||| |||||||| |||||
Sbjct: 33 ctgggattacaggcatgagccaccgtgcc 5
Score = 63.9 bits (32), Expect = 3e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||||||||||| ||||||||||||| ||| ||| ||||||||||
Sbjct: 4 gggcacggtggctcatgcctgtaatcccagcaccttgggaggctgagg 51
>RF00017;Metazoa_SRP;AACZ02114187.1/25615-25895 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 192 bits (97), Expect = 4e-48
Identities = 220/261 (84%), Gaps = 3/261 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || |||||| |||| |||||||||| |||||||||||||||||
Sbjct: 260 acccaggctggagtgcagtggtgcaatctcagctcactgcagcctctgcctcctgggttc 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
||||||||||||| ||||||||| | |||||||||||||||||| | | ||||||| |
Sbjct: 200 cagcgattctcctgcctcagcctcctaggtagctgggattacaggctcccaccaccacgc 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
|| |||| ||||||||| ||||||| ||||||| |||||||||||||||||||
Sbjct: 140 ccggctaattttt-gtatttttagtagagacagggtttctccatgttggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
| |||||||||| ||||| ||||||||| ||| ||||||||||||||||| ||| |||
Sbjct: 81 tggaactcctgacctcaggtgatccacccacctcagcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccactgtgcctggc 271
| ||||||||| | |||||||
Sbjct: 21 gcgtgagccaccgcgcctggc 1
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggctgagg 51
Score = 50.1 bits (25), Expect = 4e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 566 aggctgcagtgagctatgactgcatcactgcactccagcccgggggaca 614
||||||||||||||| || |||| ||||||||||||||| ||| ||||
Sbjct: 216 aggctgcagtgagctgagattgcaccactgcactccagcctgggtgaca 264
>RF00017;Metazoa_SRP;ABSL01047875.1/79690-79970 9606:Homo sapiens
(human)
Length = 281
Score = 192 bits (97), Expect = 4e-48
Identities = 220/261 (84%), Gaps = 3/261 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || |||||| |||| |||||| ||| |||||||||||||||||
Sbjct: 260 acccaggctggagtgcagtggtgcaatctcagctcaccgcagcctctgcctcctgggttc 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
||||||||||||| ||||||||| | |||||||||||||||||| | | ||||||| |
Sbjct: 200 cagcgattctcctgcctcagcctcctaggtagctgggattacaggctcccaccaccacgc 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
|| |||| ||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 140 ccggctaattttt-gtatttttagtagagacggggtttctccatgttggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
| |||||||||| ||||| ||||||||| ||| ||||||||||||||||| ||| |||
Sbjct: 81 tggaactcctgacctcaggtgatccacccacctcagcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccactgtgcctggc 271
| ||||||||| | |||||||
Sbjct: 21 gcgtgagccaccgcgcctggc 1
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;ABGA01211172.1/18273-17973 9601:Pongo abelii
(Sumatran orangutan)
Length = 301
Score = 190 bits (96), Expect = 2e-47
Identities = 210/248 (84%), Gaps = 4/248 (1%)
Strand = Plus / Minus
Query: 16 caggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaag 75
||||||||||| |||||| ||||| ||||||| |||| ||||||||||||||||||||
Sbjct: 256 caggctagagtgcaatggcatgatctcggctcaccgcaacctctgcctcctgggttcaag 197
Query: 76 cgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacaccca 133
||||||||||| ||||||||| |||| ||| ||||||||||| | ||||||||||||
Sbjct: 196 cgattctcctgcctcagcctcctgagtaactgcgattacaggcatgcaccaccacaccca 137
Query: 134 gctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctca 193
|||| ||||||||| ||||||| ||||||| |||||||| ||||||||||||
Sbjct: 136 gctaattat--gtatttttagtagagacagggtttctccatgttggtcaggctggtctcg 79
Query: 194 aactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtg 253
|||||| ||| ||||| ||||||||| ||| ||||||||||||||||| ||| |||| |
Sbjct: 78 aactcccgacctcaggtgatccacccacctcagcctcccaaagtgctgggattacaggcg 19
Query: 254 tgagccac 261
||||||||
Sbjct: 18 tgagccac 11
Score = 60.0 bits (30), Expect = 4e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AC079176.15/137643-137361 9606:Homo sapiens
(human)
Length = 283
Score = 190 bits (96), Expect = 2e-47
Identities = 219/260 (84%), Gaps = 3/260 (1%)
Strand = Plus / Minus
Query: 4 actcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcct 63
|||||| || |||||||| |||| || |||||||||||| ||||||||||| ||| |||
Sbjct: 269 actcttgttgcccaggctggagtgcagtggtgcgatcttagctcactgcaacctccacct 210
Query: 64 cctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcg 121
||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||| | ||
Sbjct: 209 cctgggttcaagccattctcctgtctcagcctcctgagtagctggcattacaggcgcccg 150
Query: 122 ccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcc 181
|||||||||||||||| ||||||||| |||||| ||||||||| ||| |||| |
Sbjct: 149 ccaccacacccagcta-atttttgtatttttagtagagatggggtttcagcatattggtc 91
Query: 182 aggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctg 241
|||| |||| |||||||||| ||||| ||||||||||||| ||||||||||||||||
Sbjct: 90 aggccagtctggaactcctgacctcaggtgatccacccgcctcagcctcccaaagtgctg 31
Query: 242 gaatttcaggtgtgagccac 261
| || |||| |||||||||
Sbjct: 30 ggatgacaggcgtgagccac 11
Score = 58.0 bits (29), Expect = 2e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||| |||||||||| |||||| |||||| ||||||| |||||||||||
Sbjct: 4 gggcgcggtggctcacgcctgtcatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;CABD01476972.1/527-247 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 281
Score = 190 bits (96), Expect = 2e-47
Identities = 220/260 (84%), Gaps = 5/260 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| || | |||||| | |||||||| |||| |||| || |||||||||||||||
Sbjct: 257 cccaggctggaatgcaatggcgtgatcttgggtcaccgcaacctttgcctcctgggttca 198
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|| |||||||||| ||| |||||| |||||||||||||||||||| |||||||| ||
Sbjct: 197 agtgattctcctgcttcaccctcccgagtagctgggattacaggcatacgccaccatgcc 138
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| ||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 137 ctgctaatttt--gtatttttagtagagacggggtttcatcatgttggtcaggctggtct 80
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||| ||||| ||||||||| ||| ||||||| ||||||||| ||| ||||
Sbjct: 79 tgaactcctgacctcaggtgatccacccacctcagcctccc-aagtgctgggattacagg 21
Query: 252 tgtgagccactgtgcctggc 271
||| |||||| |||||||||
Sbjct: 20 tgtcagccaccgtgcctggc 1
>RF00017;Metazoa_SRP;ABGA01147220.1/1143-842 9601:Pongo abelii
(Sumatran orangutan)
Length = 302
Score = 188 bits (95), Expect = 7e-47
Identities = 215/255 (84%), Gaps = 3/255 (1%)
Strand = Plus / Minus
Query: 15 ccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaa 74
||||||| |||| |||||| ||||||||||||||||||| |||||||| | | ||||||
Sbjct: 258 ccaggctggagtgcaatggcacgatcttggctcactgcaacctctgccttccgagttcaa 199
Query: 75 gcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacaccc 132
|||||||||||| ||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 198 gcgattctcctgcctcagcctcctgagcagctgggattacaggagcccgccaccacacct 139
Query: 133 agctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctc 192
|||| ||||||||| |||||||||||||||| |||||||||||| |||||||
Sbjct: 138 ggctaattttt-gtatttttagtagagacggggtttcaccatgttggccagagtggtctc 80
Query: 193 aaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggt 252
|||||||||| ||| | ||||| || |||| ||||||||||||||||| ||| |||||
Sbjct: 79 gaactcctgacctcaagtgatccgcctgcctccgcctcccaaagtgctgggattacaggt 20
Query: 253 gtgagccactgtgcc 267
||||||||| |||||
Sbjct: 19 gtgagccaccgtgcc 5
Score = 61.9 bits (31), Expect = 1e-08
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattac 411
||||||||||||||| |||||||||||| ||||||| ||||| |||||| | |||| ||
Sbjct: 4 gggcacggtggctcacacctgtaatcccagcactttgggaggcggaggcaggcggatcac 63
Query: 412 ttg 414
|||
Sbjct: 64 ttg 66
>RF00017;Metazoa_SRP;ABGA01149634.1/4407-4126 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 188 bits (95), Expect = 7e-47
Identities = 212/250 (84%), Gaps = 5/250 (2%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||||| ||||| |||||||||||| |||||||||||||||| |
Sbjct: 257 cccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgcctcctgggttta 198
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| ||||||||| ||||||||||||||||||| | |||||||| ||
Sbjct: 197 agcgattctcctgcctcagcctcctgagtagctgggattacaggcgcccgccaccatgcc 138
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|| ||||||||| || |||| |||||||||||||||||||||||||||||
Sbjct: 137 tg--taattttt-gtatttttagtaaagacagggtttcatcatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| |||| ||||||||| ||| |||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcagatgatccacccacctcggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
|| ||||||
Sbjct: 20 cgtaagccac 11
>RF00017;Metazoa_SRP;AADC01128110.1/20452-20169 9606:Homo sapiens
(human)
Length = 284
Score = 188 bits (95), Expect = 7e-47
Identities = 192/226 (84%), Gaps = 2/226 (0%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcc 95
|||| |||||||||||| ||| |||||||||||| |||| ||||||||| |||||||||
Sbjct: 236 atctcggctcactgcaacctccgcctcctgggtttaagcaattctcctgcctcagcctcc 177
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
|||||||||||||||||| | | |||||| ||||||| | | ||||||| |
Sbjct: 176 tgagtagctgggattacaggtgcccaccaccatacccagcaaattttttgcatttttagt 117
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
|||||| ||||||||||||||||||||||||||| || |||| ||||| ||||| |||||
Sbjct: 116 agagacagggtttcatcatgttggccaggctggtttcgaacttctgacctcaggtgatcc 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|||||||| |||||||||||||||||| ||| |||| |||||||||
Sbjct: 56 acccgcctcggcctcccaaagtgctgggattacaggcgtgagccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||||||| ||||||||||||| ||||||| ||||| |||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggccgaggc 52
>RF00017;Metazoa_SRP;AADC01067628.1/21018-20736 9606:Homo sapiens
(human)
Length = 283
Score = 188 bits (95), Expect = 7e-47
Identities = 203/239 (84%), Gaps = 3/239 (1%)
Strand = Plus / Minus
Query: 31 tggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tc 88
||||| ||||| |||||||||||| ||| ||||||| |||| |||||||||||||| ||
Sbjct: 242 tggtgtgatctcggctcactgcaacctccgcctcctaggtttaagcgattctcctgcctc 183
Query: 89 agcctcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtat 148
||||||| ||||| ||||||||||||||| |||||||| |||||||| || |
Sbjct: 182 agcctcctgagtagatgggattacaggcacctgccaccacgcccagctaattttt-gtgt 124
Query: 149 ttttantagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcag 208
||||| |||||||||||||||| ||||||||||||||||| ||| |||||||||| |||
Sbjct: 123 ttttagtagagacggggtttcaccatgttggccaggctggcctcgaactcctgacctcaa 64
Query: 209 gcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcc 267
| |||| |||| ||| ||||||||||||||| | ||| ||||||||||||||||||||
Sbjct: 63 gtgatctacccacctctgcctcccaaagtgctaggattacaggtgtgagccactgtgcc 5
>RF00017;Metazoa_SRP;AADB02020239.1/376033-376314 9606:Homo sapiens
(human)
Length = 282
Score = 188 bits (95), Expect = 7e-47
Identities = 218/259 (84%), Gaps = 4/259 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||| | |||||||||||||||||| ||| |||||
Sbjct: 267 ctcttcttgcccaggctggagtgcaatggcgtgatcttggctcactgcaacctccgcctc 208
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
||| ||||||| |||| |||| ||||||||| || ||||||||||||||||| |||
Sbjct: 207 ctgttttcaagcaattcgcctgcctcagcctcctgagaagctgggattacaggcatgcgc 148
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|||||||||| |||| ||||||||| ||||||| ||||||| |||||||| ||
Sbjct: 147 caccacacccggctaatttt--gtatttttagtagagacagggtttctccatgttggtca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
|||||||||| |||||| ||| |||| ||||||||| ||| ||||||||||||||||||
Sbjct: 89 ggctggtctcgaactcccgaccacaggtgatccacccacctcggcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccac 261
||| ||||||||||||||
Sbjct: 29 gattacaggtgtgagccac 11
>RF00017;Metazoa_SRP;AADD01111802.1/3172-3455 9606:Homo sapiens
(human)
Length = 284
Score = 188 bits (95), Expect = 7e-47
Identities = 210/250 (84%), Gaps = 2/250 (0%)
Strand = Plus / Minus
Query: 16 caggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaag 75
|||||| |||| || ||| || |||| |||||||||||| ||||||||||||||||||||
Sbjct: 258 caggctggagtgcagtggcgctatctcggctcactgcaacctctgcctcctgggttcaag 199
Query: 76 cgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacaccca 133
| ||||||||| ||||||||| ||||||| |||||||||| | ||||||| ||
Sbjct: 198 caattctcctgcctcagcctcctgagtagctaggattacaggtgcctgccaccatgcctg 139
Query: 134 gctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctca 193
|||| ||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 138 gctaattttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcg 79
Query: 194 aactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtg 253
|||||||||| ||||| ||||||||| ||| ||||||||||| |||||| ||| ||||
Sbjct: 78 aactcctgacctcaggtgatccacccacctcggcctcccaaaatgctgggattacaggca 19
Query: 254 tgagccactg 263
||||||||||
Sbjct: 18 tgagccactg 9
>RF00017;Metazoa_SRP;CABD01290083.2/337-622 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 286
Score = 188 bits (95), Expect = 7e-47
Identities = 214/253 (84%), Gaps = 6/253 (2%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 262 cccaggctggagtgcaatggtgcgatctcggctcactgcaacctctgcctcctgggttca 203
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| ||||||||| ||||||||||||||||||||| | ||| || ||
Sbjct: 202 agcaattctcctgcctcagcctcctgagtagctgggattacaggcacccaccatcatgcc 143
Query: 132 cagctannnnnnngta---tttttantagagacggggtttcatcatgttggccaggctgg 188
|||||| ||| |||||| ||||||| |||||||| |||||||| |||||| |
Sbjct: 142 cagcta-atttttgtattttttttagtagagacagggtttcaccatgttggtcaggctag 84
Query: 189 tctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttc 248
|||| |||||||||| ||||| ||||||||| ||| |||||||||| |||||| ||| |
Sbjct: 83 tctcgaactcctgacctcaggtgatccacccacctcagcctcccaaactgctgggattac 24
Query: 249 aggtgtgagccac 261
||| |||||||||
Sbjct: 23 aggcgtgagccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||| |||||||||| ||||||||||||| || |||| ||||||||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcagtttgggaggctgagg 51
>RF00017;Metazoa_SRP;AANU01196268.1/1377-1075 9544:Macaca mulatta
(rhesus monkey)
Length = 303
Score = 188 bits (95), Expect = 7e-47
Identities = 210/250 (84%), Gaps = 2/250 (0%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| ||||||||| |||| ||||| |||||||||||||||||| ||||
Sbjct: 260 cccaggctggagtgcaatggtgcaatctcagctcattgcaaactctgcctcctgcattca 201
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||||| ||||||| |||||||||||||| |||| | ||||||| ||
Sbjct: 200 agcgattctcctgtctcagcctcctgagtagctgggattataggcgtgcaccaccacgcc 141
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||| ||||| ||| ||||||| | |||||| |||||||||||||||||| |
Sbjct: 140 tagctgattttttgtattattagtagagacagagtttcaccatgttggccaggctggtgt 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 80 caaactcctgatctcaggtgatccacctgccttggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 52.0 bits (26), Expect = 1e-05
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||||| ||||||||||||| ||||||| |||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AC210181.5/143169-143450 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 188 bits (95), Expect = 7e-47
Identities = 218/259 (84%), Gaps = 4/259 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||| ||||||| ||||||| |||| |||||||||
Sbjct: 267 ctcttgttgcccaggctggagtgcaatggcgcgatctcggctcaccgcaacctctgcctc 208
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
|||||||||| | ||||||||| ||||||||||||||||||||||||||||||| | |
Sbjct: 207 ctgggttcaaactattctcctgcctcagcctcccaagtagctgggattacaggcatgcac 148
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||||| |||| ||| ||||||||| ||||||| ||||||| ||| |||| ||
Sbjct: 147 caccatgcccaccta--attttgtatttttagtagagacagggtttctccatattggtca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
||||||| || |||||| ||| ||||| |||||||| ||||||||||||||||||||| |
Sbjct: 89 ggctggtttcgaactcccgacctcaggtgatccacctgccttggcctcccaaagtgctag 30
Query: 243 aatttcaggtgtgagccac 261
||| |||| |||||||||
Sbjct: 29 gattacaggcgtgagccac 11
>RF00017;Metazoa_SRP;ABGA01093781.1/18416-18133 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 186 bits (94), Expect = 3e-46
Identities = 221/265 (83%), Gaps = 2/265 (0%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| ||| || ||| | ||||| |||||||| || ||| |
Sbjct: 273 ttcactcttgttgcccaggctggagcacagtggcgtgatctcagctcactgtaacctccg 214
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| |
Sbjct: 213 cctcctgggttcaagccattctcctgcctcagcctcctgagtagctgggattacaggtgc 154
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
| |||||||||| |||| ||||||||| ||||||| ||||||| |||||||
Sbjct: 153 ccaccaccacacctggctaattttttgtatttttagtagagacatggtttcaccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||||| ||
Sbjct: 93 gccaggctggtctcaaactcccgacctcaggtgatccacccgcctcagcctcccaaaatg 34
Query: 239 ctggaatttcaggtgtgagccactg 263
|||| ||| |||| |||||||||||
Sbjct: 33 ctgggattacaggcgtgagccactg 9
Score = 52.0 bits (26), Expect = 1e-05
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||||| ||||||||||||| || |||| |||||||||||
Sbjct: 11 gtggctcacgcctgtaatcccagcattttgggaggctgaggc 52
>RF00017;Metazoa_SRP;ABGA01120352.1/1652-1932 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 186 bits (94), Expect = 3e-46
Identities = 199/234 (85%), Gaps = 3/234 (1%)
Strand = Plus / Minus
Query: 36 cgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcct 93
|||||| |||||||||||| |||||||||||||||||| | ||||||||| |||||||
Sbjct: 237 cgatctcggctcactgcaagctctgcctcctgggttcacaccattctcctgcctcagcct 178
Query: 94 cccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtattttta 153
|| ||||||||||| |||||||| |||||||| |||||||| |||||||||
Sbjct: 177 cctgagtagctgggactacaggcaaccgccaccatgcccagctaattgtt-gtattttta 119
Query: 154 ntagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgat 213
||||||| |||||||| || |||||||| |||||||| |||||||||| ||||| |||
Sbjct: 118 gtagagacagggtttcaccaagttggccacgctggtcttgaactcctgacctcaggtgat 59
Query: 214 ccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcc 267
|||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 58 ccacccgcctcagcctcccaaagtgctgggattacaggtgtgagccaatgtgcc 5
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 360 tggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 12 tggctcacacctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;ABGA01291646.1/18820-19110 9601:Pongo abelii
(Sumatran orangutan)
Length = 291
Score = 186 bits (94), Expect = 3e-46
Identities = 220/266 (82%), Gaps = 9/266 (3%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| || |||| ||||||||||||||||||| |||||||||
Sbjct: 276 ctcttgttgcccaggctggagtgcagtggtacgatcttggctcactgcaacctctgcctc 217
Query: 65 ctgggttcaagcgattctcctg---------tcagcctcccaagtagctgggattacagg 115
||| ||||||| |||| ||||| |||||||||| ||||||||||||||||||
Sbjct: 216 ctgagttcaagtgattttcctgcctcagccctcagcctcccgagtagctgggattacagg 157
Query: 116 cactcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatg 175
||| | |||||| |||||||| | ||||||| ||||||| |||||||| ||||
Sbjct: 156 cacccaccaccaagcccagctaattttttgcatttttagtagagacagggtttcaccatg 97
Query: 176 ttggccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaa 235
||||||||| ||||||| |||||||||| ||||| ||||| ||||||| ||||||||||
Sbjct: 96 ttggccaggatggtctcgaactcctgacctcaggtgatccgcccgcctctgcctcccaaa 37
Query: 236 gtgctggaatttcaggtgtgagccac 261
||||||| || |||| |||||||||
Sbjct: 36 gtgctgggatcacaggcgtgagccac 11
>RF00017;Metazoa_SRP;AADA01208957.1/8525-8806 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 186 bits (94), Expect = 3e-46
Identities = 208/246 (84%), Gaps = 4/246 (1%)
Strand = Plus / Minus
Query: 18 ggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcg 77
|||| |||| |||||| |||||| ||||||| ||| |||||||||| ||||||||||
Sbjct: 254 ggctggagtgcaatggcacgatctcggctcaccacaacctctgcctcccgggttcaagca 195
Query: 78 attctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacccagc 135
||||||||||| ||||||| |||||||||||||||||||| |||||||||||| ||
Sbjct: 194 attctcctgtctcagcctcctgagtagctgggattacaggcatccgccaccacacctggc 135
Query: 136 tannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctcaaa 195
|| ||||||||| |||||||| |||||| |||||||| |||||||||||||||
Sbjct: 134 taatttt--gtatttttagtagagacgcggtttctccatgttggtcaggctggtctcaaa 77
Query: 196 ctcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtg 255
|||| ||| ||||| ||||| ||||||| |||||||||||||||||| ||| |||| |||
Sbjct: 76 ctcccgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtg 17
Query: 256 agccac 261
||||||
Sbjct: 16 agccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||||||| ||||||||||||| ||||||| ||||| |||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggccgaggc 52
>RF00017;Metazoa_SRP;AADD01042441.1/10723-11005 9606:Homo sapiens
(human)
Length = 283
Score = 186 bits (94), Expect = 3e-46
Identities = 224/266 (84%), Gaps = 5/266 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| ||||||||| |||| ||||||||||| ||||||||
Sbjct: 268 ctcttgttgcccaggctggagtgcaatggtgcaatctcagctcactgcaacctctgcctt 209
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagc-tgggattacaggcactcg 121
|| ||||| ||| ||| ||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 208 ctaggttccagcaattttcctgcctcagcctcccaagtagcttgggattacaggcatgcg 149
Query: 122 ccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcc 181
|||||||||||||||| ||||||||| || |||| ||||||| |||||||| |
Sbjct: 148 ccaccacacccagcta--attttgtatttttagtaaagacagggtttctccatgttggtc 91
Query: 182 aggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctg 241
||||||||||| |||||| || ||||| ||||| ||| |||||||||||||||||||||
Sbjct: 90 aggctggtctcgaactccctacctcaggtgatccgcccaccttggcctcccaaagtgctg 31
Query: 242 gaatttcaggtgtgagccactgtgcc 267
| ||| |||| ||||||||| |||||
Sbjct: 30 ggattgcaggcgtgagccaccgtgcc 5
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
||||||||||||||| ||||| ||||||| ||||||| |||||
Sbjct: 4 gggcacggtggctcacgcctgcaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AC011443.6/4341-4623 9606:Homo sapiens (human)
Length = 283
Score = 186 bits (94), Expect = 3e-46
Identities = 211/250 (84%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| || | || ||||||||||| |||||||||||| |||||||||||| |||||
Sbjct: 259 cccaggctggaatgcagtggtgcgatctcggctcactgcaacctctgcctcctgagttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| |||||||||| ||||||||||||||||| | | | ||||||| ||
Sbjct: 199 agcgattctcctgtctcagcctcccgagtagctgggattacagacccccaccaccacgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| ||| ||||||||| | ||||| ||||||||| |||||||||||||||||||
Sbjct: 139 cgacta-atttttgtatttttagtggagacagggtttcattatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||| | ||||||| | ||| |||||||||||||||||| || ||||
Sbjct: 80 cgaactcctgacctcaagtgatccactcacctcagcctcccaaagtgctggagttacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 48.1 bits (24), Expect = 2e-04
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattacttgtggc 418
|||||||| |||||||| ||| ||||||| |||||||||| || |||| ||||| ||
Sbjct: 11 gtggctcacgcctgtaactccagcactttgggaggctgaggtgagtggatcacttgaggt 70
Query: 419 aaggggctggagaccagcctggacaaca 446
||| | | ||||||||||||| |||||
Sbjct: 71 caggagttcgagaccagcctggccaaca 98
>RF00017;Metazoa_SRP;AADB02018414.1/51522-51801 9606:Homo sapiens
(human)
Length = 280
Score = 186 bits (94), Expect = 3e-46
Identities = 211/250 (84%), Gaps = 4/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| ||| |||||||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 258 cccaggctggagcacaatggtgcgatctcagctcactgcaacctccgcctcctgggttca 199
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 198 agccattctcctgcctcagcctcccaagcagctgggattacaggcatgcgccaccacacc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| ||||||| | ||||||| ||||||| ||||||| |||||||||||
Sbjct: 138 cggcta--attttgtattttcagtagagacagggtttctctatgttggtcaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| ||||||| | ||| ||||||||||||| ||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatccactcacctcggcctcccaaagttttgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 52.0 bits (26), Expect = 1e-05
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||||| |||||||||||||| |||||| ||||| ||||
Sbjct: 10 ggtggctcacgcctgtaatcccaaaactttgggaggccgagg 51
>RF00017;Metazoa_SRP;AANU01286028.1/26918-26635 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 186 bits (94), Expect = 3e-46
Identities = 218/261 (83%), Gaps = 2/261 (0%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| || | |||||||| ||| | |||||||||||| |||||||||
Sbjct: 269 ctcttgttgcccaggctggattgcaatggtgtgatttcggctcactgcaacctctgcctc 210
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||| | |
Sbjct: 209 ctgggttcaagcgattctcctgtctcagcctcctgagtagctgggattacaggcacccac 150
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||| || || |||| ||||||||| |||||||||||||||| ||||| | |||
Sbjct: 149 cactacgcctggctaatttttggtatttttagtagagacggggtttcaccatgtcgacca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
||||||||| |||||||||| ||||| |||| ||| ||| |||||||||||||||||
Sbjct: 89 ggctggtcttgaactcctgacctcaggtgatctgcccacctcagcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccactg 263
||| |||| ||||||||||
Sbjct: 29 gattacaggcatgagccactg 9
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 11 gtggctcatgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AADA01147913.1/1971-1689 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 184 bits (93), Expect = 1e-45
Identities = 212/252 (84%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| ||| |||||||||| ||||||||||| ||||||||||||||||
Sbjct: 259 cccaggctggagtgcaagggtgcgatctcagctcactgcaacctctgcctcctgggtttg 200
Query: 74 agcgattctcctgt--cagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|||||||||||||| |||||||| |||||||||||||||||| | ||||||| ||
Sbjct: 199 agcgattctcctgtttcagcctcctgagtagctgggattacaggtgcctgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
||||| ||||||||| |||||||||||||||| || |||||||||||||||||
Sbjct: 139 cagct-gatttttgtatttttagtagagacggggtttcaccacgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| ||||||||||||| ||||||| ||||||||| ||| |||
Sbjct: 80 cgaactcctgacctcaggtgatccacccgcctcagcctccctaagtgctgggattatagg 21
Query: 252 tgtgagccactg 263
||||||||||
Sbjct: 20 catgagccactg 9
>RF00017;Metazoa_SRP;AADA01114687.1/1497-1213 9598:Pan troglodytes
(chimpanzee)
Length = 285
Score = 184 bits (93), Expect = 1e-45
Identities = 200/236 (84%), Gaps = 3/236 (1%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcc 95
|||| |||||||||||| ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 237 atctcggctcactgcaacctctgcctcctgggttcaagcaattctcctgtctcagcctcc 178
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
| ||||||||||| ||||| | | |||||||||||||||| ||| ||||| |
Sbjct: 177 ctagtagctgggacaacaggggcacaccaccacacccagctaattttttgtaattttagt 118
Query: 156 agagacggggtttcatcatgttggccaggctggtctca-aactcctgacgtcaggcgatc 214
|||||| |||||||| ||| |||| || |||||||||| |||||||||| ||||| ||||
Sbjct: 117 agagacagggtttcaccatattggtcaagctggtctcagaactcctgacctcaggtgatc 58
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcctgg 270
||||| || ||||||||||||||||| ||| |||||||||||||| ||||||||
Sbjct: 57 cacccatctcagcctcccaaagtgctgggattacaggtgtgagccaccgtgcctgg 2
Score = 60.0 bits (30), Expect = 4e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 353 ggcacggtggctcaggcctgtaatcccaacactttgagaggctgag 398
|||||||||||||| |||||||||||| ||||||| |||||||||
Sbjct: 5 ggcacggtggctcacacctgtaatcccagcactttgggaggctgag 50
>RF00017;Metazoa_SRP;AADA01218778.1/494-212 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 184 bits (93), Expect = 1e-45
Identities = 195/229 (85%), Gaps = 3/229 (1%)
Strand = Plus / Minus
Query: 35 gcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcc 92
||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 238 gcgatctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagct 179
Query: 93 tcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtattttt 152
||| |||||||||||||||| || | | |||| |||| ||| ||||||||
Sbjct: 178 tcctgagtagctgggattacaagcgtgccctaccatgcccaactaattttt-gtattttt 120
Query: 153 antagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcga 212
| ||||||||||||||||||||||||||||||||||||| |||||||||| ||| | ||
Sbjct: 119 agtagagacggggtttcatcatgttggccaggctggtcttgaactcctgacctcaagtga 60
Query: 213 tccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
||||||||||| ||||||||||||||||| ||| |||| |||||||||
Sbjct: 59 tccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccac 11
Score = 65.9 bits (33), Expect = 7e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||| |||||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AACZ02178435.1/37297-37014 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 182 bits (92), Expect = 4e-45
Identities = 219/263 (83%), Gaps = 2/263 (0%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||| ||| | |||||||||||| | |||
Sbjct: 273 ttcactcttgttgcccaggctggagtgcaatggccagatgtgggctcactgcaaccactg 214
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
||||| |||||||||||||||| ||| |||||||||| ||||||||| |||||||| |
Sbjct: 213 cctcccgggttcaagcgattcttctgcctcagcctccctagtagctggaattacaggtgc 154
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
| |||||| | | ||| ||||||||| ||||||| |||||||| |||||||
Sbjct: 153 ccaccaccaagcgcccctagttttttgtatttttagtagagaccgggtttcaccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
||||||||||||| |||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 93 gccaggctggtcttgaactcctgacctcaggcgatccacctgcctcggcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| |||| |||||||||
Sbjct: 33 ctgggattacaggcgtgagccac 11
Score = 60.0 bits (30), Expect = 4e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||| |||||||||| ||||||||||||| ||||||| ||||| ||||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggca 53
>RF00017;Metazoa_SRP;AC008407.4/62829-62542 9606:Homo sapiens
(human)
Length = 288
Score = 182 bits (92), Expect = 4e-45
Identities = 194/228 (85%), Gaps = 3/228 (1%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcc 95
|||| |||||||||||| || ||||| |||||||||||||||| ||||| |||||||||
Sbjct: 235 atctcggctcactgcaacctttgcctactgggttcaagcgattatcctgcctcagcctcc 176
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
||||||||||||||||||| | ||||||| | ||||||| |||||||| |
Sbjct: 175 tgagtagctgggattacaggcgcctgccaccatatccagctaattttt-gtattttttgt 117
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||| |||||
Sbjct: 116 agagacgggttttcatcatgttgtccaggctagtctcaaactcctgacctcaggtgatcc 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
|||| ||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 56 acccacctcagcctcccaaagtgctggaattacaggcatgagccactg 9
>RF00017;Metazoa_SRP;CABD01530395.2/590-309 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 182 bits (92), Expect = 4e-45
Identities = 217/259 (83%), Gaps = 4/259 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| ||||||||| ||||||||||||||||| |||||||||
Sbjct: 267 ctcttgttgcccaggctggagtgcaatggtgcaatcttggctcactgcaacctctgcctc 208
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
||||||||| || ||||||||| |||||||||||||||||||| |||||||||| |||
Sbjct: 207 ctgggttcacgccattctcctgtctcagcctcccaagtagctggaattacaggcatgcgc 148
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||||| || ||| ||||||||| |||||||| |||||| |||||||| ||
Sbjct: 147 caccatgccaggct--gattttgtatttttagtagagacgtggtttctccatgttggtca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
| ||||||||||||||| || |||| ||||| ||| ||| ||||||||||||||||||
Sbjct: 89 gactggtctcaaactcccaacctcagatgatccgcccacctcggcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccac 261
||| |||| |||||||||
Sbjct: 29 gattacaggcgtgagccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||| |||||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;ABGA01089872.1/3114-3415 9601:Pongo abelii
(Sumatran orangutan)
Length = 302
Score = 180 bits (91), Expect = 2e-44
Identities = 193/227 (85%), Gaps = 3/227 (1%)
Strand = Plus / Minus
Query: 43 ggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagt 100
||||||||||| ||||||||||||||||||| |||||| ||| |||||||||||| |
Sbjct: 230 ggctcactgcagcctctgcctcctgggttcaaatgattcttctgcctcagcctcccaaat 171
Query: 101 agctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagaga 160
| |||||| |||||| | ||||||||||||| |||| ||||||||| ||||||
Sbjct: 170 aactgggactacaggagcacgccaccacacccggctaattttt-gtatttttagtagaga 112
Query: 161 cggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccg 220
|||||||||| ||||||||||||||||||||| |||||| ||| ||||| |||| |||
Sbjct: 111 cggggtttcaccatgttggccaggctggtctcgaactccagacctcaggtgatctgccca 52
Query: 221 ccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcc 267
||| ||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 51 cctcagcctcccaaagtgctgggattacaggtgtgagccactgtgcc 5
Score = 56.0 bits (28), Expect = 6e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||| |||||||| |||||||||||| ||||||| ||||||||||
Sbjct: 4 gggcacagtggctcacacctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;ABGA01006118.1/24807-24526 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 180 bits (91), Expect = 2e-44
Identities = 193/227 (85%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 37 gatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctc 94
||||| ||||| |||||| ||||||||||||||||||||||||||||||| || |||||
Sbjct: 235 gatctcggctcgctgcaacctctgcctcctgggttcaagcgattctcctgcctctgcctc 176
Query: 95 ccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttan 154
|||||||||||||||||||||||| ||||||||| |||||||| ||| |||||
Sbjct: 175 ccaagtagctgggattacaggcacccgccaccacgcccagcta--attgtgtacttttaa 118
Query: 155 tagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatc 214
|| |||| || |||| |||||||| | ||||| |||| |||||| ||| ||||| ||||
Sbjct: 117 taaagacaggatttctccatgttggtcgggctgttctcgaactcccgacctcaggtgatc 58
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
||||| |||||||||||| ||||||||| ||| |||| |||||||||
Sbjct: 57 cacccaccttggcctcccgaagtgctgggattacaggcgtgagccac 11
>RF00017;Metazoa_SRP;AADA01102416.1/11592-11872 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 180 bits (91), Expect = 2e-44
Identities = 214/255 (83%), Gaps = 3/255 (1%)
Strand = Plus / Minus
Query: 11 ttacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggt 70
|||||| |||| |||| || ||| || |||||||||||||| || ||| ||||||||||
Sbjct: 262 ttaccctggctggagtgcagtggcgccatcttggctcactgaaacttcttcctcctgggt 203
Query: 71 tcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccac 128
|||||| ||||||||||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 202 tcaagccattctcctgtctcagcctcccaagtagctgggattacaagcatccgccaccac 143
Query: 129 acccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctgg 188
|||| | || ||||||||| ||||||| |||||||| ||||||||| |||||
Sbjct: 142 acccggtta-atttttgtatttttagtagagactgggtttcacggtgttggccaagctgg 84
Query: 189 tctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttc 248
|||| |||||||||| ||||| | |||||| ||| |||||||||||||||||| ||| |
Sbjct: 83 tctcgaactcctgacctcaggtaacccacccacctcggcctcccaaagtgctgggattac 24
Query: 249 aggtgtgagccactg 263
||| |||||||||||
Sbjct: 23 aggcgtgagccactg 9
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;AADA01270340.1/4157-4439 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 180 bits (91), Expect = 2e-44
Identities = 220/263 (83%), Gaps = 3/263 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
|||||||||||| |||||||| ||| ||| || | ||||| |||||||||||| ||| |
Sbjct: 272 ttcactcttattgcccaggctggagcgcaacggcgtgatctcggctcactgcaacctccg 213
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||| ||| ||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 212 cctcctgggttccagcaattctcctgcctcagtctcctaagtagctgggattacaggcag 153
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
||||||| |||||||| ||||||||| ||||||| ||| |||| ||||||
Sbjct: 152 gtgccaccatgcccagctaattttt-gtatttttagtagagacagggcttcactatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
| |||||||||||| |||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 93 gtcaggctggtctcgaactcctgacctcaggtgatccgcctgccttagcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| |||| |||||||||
Sbjct: 33 ctgggattacaggcgtgagccac 11
Score = 58.0 bits (29), Expect = 2e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||||| ||||||||||||| ||||||| |||||| |||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggctaaggca 53
>RF00017;Metazoa_SRP;AADB02328392.1/351-633 9606:Homo sapiens
(human)
Length = 283
Score = 180 bits (91), Expect = 2e-44
Identities = 220/263 (83%), Gaps = 3/263 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| || ||| | ||||| |||||||||||| |||||
Sbjct: 272 ttcactcttgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaacctctg 213
Query: 61 cctcctgggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcac 118
|||||||||||| ||| ||||||||||| |||||| ||||||| |||||||||| |
Sbjct: 212 cctcctgggttccagcaattctcctgtctcagcctcttgagtagcttggattacaggtgc 153
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
||||| ||| | |||| ||||||| | ||||||||||||||| | |||||
Sbjct: 152 ctgccactacatctggctaattttt-gtattttcagtagagacggggtttcgccctgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||||||
Sbjct: 93 gccaggctggtctcaaactcctggcctcaagcgatccacctgccttggcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| ||||||||||||||
Sbjct: 33 ctgggattacaggtgtgagccac 11
Score = 63.9 bits (32), Expect = 3e-09
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattac 411
||||| ||||||||| |||||||||||| ||||||| ||||| ||||| | |||| |
Sbjct: 4 gggcatggtggctcacacctgtaatcccagcactttgggaggccaaggcaggtggatcgc 63
Query: 412 ttgtggcaaggggctggagaccagcctggacaacagagcaagactccgtctctact 467
||| ||| ||| | | ||||||||||||| |||||| || | || |||||||||||
Sbjct: 64 ttgaggccaggagtttgagaccagcctggccaacagggcgaaaccccgtctctact 119
>RF00017;Metazoa_SRP;AC069080.12/41368-41075 9606:Homo sapiens
(human)
Length = 294
Score = 180 bits (91), Expect = 2e-44
Identities = 201/238 (84%), Gaps = 3/238 (1%)
Strand = Plus / Minus
Query: 28 caatggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg- 86
||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 245 caatggtgcaatcttggctcactgcaacctctgcctcctgggttcaagcgattaccctgc 186
Query: 87 -tcagcctcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnng 145
|||||||||| ||||||||| ||||||||| || ||||| ||||||| |
Sbjct: 185 ctcagcctcccgagtagctggaattacaggcgtctgcgaccacgcccagct-catttttg 127
Query: 146 tatttttantagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgt 205
|| ||||| ||||||| || ||||| |||||||| |||||||||| |||||||||| |
Sbjct: 126 tagttttagtagagacaggatttcaccatgttggtgaggctggtcttgaactcctgacct 67
Query: 206 caggcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
|||| ||||||||||||| |||||||||||||| ||| ||| ||||||||||||||||
Sbjct: 66 caggtgatccacccgcctaggcctcccaaagtgatgggattacaggtgtgagccactg 9
>RF00017;Metazoa_SRP;AADC01147155.1/334-617 9606:Homo sapiens
(human)
Length = 284
Score = 180 bits (91), Expect = 2e-44
Identities = 188/222 (84%), Gaps = 2/222 (0%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcc 95
|||| |||||||||||| |||||||||||||||| |||| ||||||||| |||||| ||
Sbjct: 236 atctcggctcactgcaacctctgcctcctgggtttaagcaattctcctgcctcagccccc 177
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
| ||||||||||||||||||| | |||||||| |||||||| ||||||||| |
Sbjct: 176 ctagtagctgggattacaggcgcccgccaccatgcccagctaattttttgtatttttagt 117
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
||| | || |||||| |||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 116 agatatggagtttcactatgttggccaggctggtctcgaactcctgacctcaggcgatcc 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcaggtgtgag 257
||| |||| |||||||||| |||||| ||| |||| |||||
Sbjct: 56 acctgcctcagcctcccaaaatgctgggattacaggcgtgag 15
Score = 52.0 bits (26), Expect = 1e-05
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||| ||||| |||| ||||||||||||| || |||| ||||||||||||
Sbjct: 4 gggcgcggtgcctcacgcctgtaatcccagcattttgggaggctgaggca 53
>RF00017;Metazoa_SRP;CABD01148433.2/474-192 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 180 bits (91), Expect = 2e-44
Identities = 214/256 (83%), Gaps = 3/256 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| || | || ||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 259 cccaggctggaatgcagtggtgcgatcttggctcactgcagcctctgcctcctgagttca 200
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||||| ||||||| ||||||||||| |||||| | |||||| |||
Sbjct: 199 agcaattctcctgtctcagcctcctgagtagctgggactacaggtgcattccaccaaacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
||||| ||||||||| |||||| ||||||||| ||||||||||||||||||||
Sbjct: 139 cagct-tagttttgtatttttagtagagatggggtttcagcatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||| ||| | ||||||||| ||||||||| |||||||||||| ||| ||||
Sbjct: 80 tgaactcctgacctcaagtgatccacccaccttggccttccaaagtgctgggattacagg 21
Query: 252 tgtgagccactgtgcc 267
|||||||| |||||
Sbjct: 20 catgagccacygtgcc 5
Score = 54.0 bits (27), Expect = 2e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttg 388
|||||| |||||||| ||||||||||||| |||||||
Sbjct: 4 gggcacrgtggctcatgcctgtaatcccagcactttg 40
>RF00017;Metazoa_SRP;AC189688.3/127858-127576 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 178 bits (90), Expect = 6e-44
Identities = 215/257 (83%), Gaps = 3/257 (1%)
Strand = Plus / Minus
Query: 17 aggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaagc 76
||||| |||| |||| |||| |||| ||||||||||| |||||||||||||||||||||
Sbjct: 256 aggctggagtgcaatagtgctatctcagctcactgcaacctctgcctcctgggttcaagc 197
Query: 77 gattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacccag 134
||||||||||| |||||||| ||||||||||||||||| || |||||||||||| |
Sbjct: 196 cattctcctgtctaagcctcccgagtagctgggattacagacatgcgccaccacacctgg 137
Query: 135 ctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctcaa 194
|| |||||||| || |||| ||||||||||||||||| |||||||||||| |
Sbjct: 136 ctggttttta-tatttttagtacagacagggtttcatcatgttggtcaggctggtctcga 78
Query: 195 actcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtgt 254
||||||||| ||||| ||| ||| || ||||||||||| |||||| ||| |||| ||
Sbjct: 77 actcctgacctcaggtaatctgcccatctcggcctcccaaaatgctgggattacaggcgt 18
Query: 255 gagccactgtgcctggc 271
|||||||||||||||||
Sbjct: 17 gagccactgtgcctggc 1
>RF00017;Metazoa_SRP;AADA01252628.1/3222-2940 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 178 bits (90), Expect = 6e-44
Identities = 210/250 (84%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || |||| |||||| |||||||||||| || |||||||||||||||
Sbjct: 259 cccaggctggagtgcagtggtacgatctcggctcactgcaacctttgcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|||||||| |||| ||||| ||| ||| |||||||| ||||||||| |||||||||||
Sbjct: 199 agcgattcgcctgcctcagcttcctaagcagctgggactacaggcacctgccaccacacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| | |||||| |||| | |||||||||||||||||||
Sbjct: 139 cagcta-acttttgtatttttagtgtagacggagttttactatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||| | |||||||| |||| |||||||||||||||||| ||| || |
Sbjct: 80 cgaactcctgacctcaagtgatccacctgcctcggcctcccaaagtgctgggattacaag 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 69.9 bits (35), Expect = 4e-11
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattac 411
||||| ||||||||| || |||||||||| ||||||| ||||| |||||| | |||| ||
Sbjct: 4 gggcatggtggctcacgcttgtaatcccagcactttgggaggccgaggcaggtggatcac 63
Query: 412 ttgtggcaaggggctggagaccagcctggacaacagagcaagactccgtct 462
||| || ||| | | ||||||||||||| ||||| || || |||||||||
Sbjct: 64 ttgaggtcaggagttcgagaccagcctggccaacatagtaaaactccgtct 114
>RF00017;Metazoa_SRP;AADA01207872.1/18925-18642 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 178 bits (90), Expect = 6e-44
Identities = 220/265 (83%), Gaps = 2/265 (0%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
|||||||||||| ||| |||| |||| ||||||||| |||| | |||||||||| || ||
Sbjct: 273 ttcactcttatttcccgggctggagtgcaatggtgcaatctcgactcactgcaacctttg 214
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||| |
Sbjct: 213 cctcctgggttcaagccattctcctgccgcagtctccctagtagctgggattacaggcgc 154
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
||||||||||||||||| ||||||||| || |||| | |||||| || |||
Sbjct: 153 ctgccaccacacccagctaattttttgtatttttagtacagacagcgtttcactatattg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
||||||||||||| ||||| |||| ||||| |||||||| |||| |||||||||| ||
Sbjct: 93 gccaggctggtcttgaactcttgacctcaggtgatccacctgcctcagcctcccaaaatg 34
Query: 239 ctggaatttcaggtgtgagccactg 263
|||| ||| ||| |||||||||||
Sbjct: 33 ctgggattacagacgtgagccactg 9
Score = 46.1 bits (23), Expect = 6e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||| | ||||||||||| || |||| ||||||||||||
Sbjct: 11 gtggctcacgtctgtaatcccagcattttgggaggctgaggca 53
>RF00017;Metazoa_SRP;AADB02001004.1/28119-27839 9606:Homo sapiens
(human)
Length = 281
Score = 178 bits (90), Expect = 6e-44
Identities = 189/222 (85%), Gaps = 4/222 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||| | |||| ||||||||||| ||| |||||||||||||
Sbjct: 257 cccaggctggagtacaatggcacaatctcagctcactgcaacctccacctcctgggttca 198
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| ||||||||||||||||||||| ||||||||| | ||||||||||
Sbjct: 197 agcaattctcctgcctcagcctcccaagtagctggggttacaggcatgcaccaccacacc 138
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| |||||||||||||||| ||||| || |||||||||||
Sbjct: 137 cagcta--attttgtatttttagtagagacggggtttcaccatgtaggtcaggctggtct 80
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctccca 233
| |||||||||| ||||| |||||||| |||| |||||||||
Sbjct: 79 cgaactcctgacctcaggtgatccacctgcctcggcctccca 38
>RF00017;Metazoa_SRP;AADC01130269.1/36909-37208 9606:Homo sapiens
(human)
Length = 300
Score = 178 bits (90), Expect = 6e-44
Identities = 212/253 (83%), Gaps = 3/253 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| |||||| | ||||||| |||||||||| ||||||||| ||||
Sbjct: 260 acccaggctggagtgcaatggcgtgatcttgactcactgcaacgtctgcctcccaggttt 201
Query: 73 aagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacac 130
|||| ||||||||||| ||||||| |||||| ||||||||||||| | ||||||| |
Sbjct: 200 aagcaattctcctgtctcagcctcctaagtagatgggattacaggcgcgtgccaccatgc 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
||||||| |||||||| ||||||| |||||||| |||||||||||||||||||
Sbjct: 140 ccagctaattttta-tatttttagtagagacagggtttcaccatgttggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| |||||||||| ||||| ||||| ||| || |||||||||||||||||| ||| |||
Sbjct: 81 tcgaactcctgacctcaggtgatccgcccaactcggcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccactg 263
| |||||||||||
Sbjct: 21 gcgtgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;CABD01347647.2/4127-4408 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 178 bits (90), Expect = 6e-44
Identities = 192/226 (84%), Gaps = 4/226 (1%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcc 95
|||||| |||||||||| |||||||||||||||| || |||||||| ||||||||
Sbjct: 234 atcttgtctcactgcaacctctgcctcctgggtttgagtgattctcccacctcagcctct 175
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
||||||| ||| |||||||| |||||||||||||||||| ||||||||| |
Sbjct: 174 tgagtagctaggactacaggcatgcgccaccacacccagctaatttt--gtatttttagt 117
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
|||||||||||||||||||||||| ||||||||||||||||||||||| ||| | | |||
Sbjct: 116 agagacggggtttcatcatgttggtcaggctggtctcaaactcctgacctcaagtggtcc 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|||||||| ||||||||| ||||||||||| |||| |||||||||
Sbjct: 56 acccgcctcagcctcccaaggtgctggaattacaggcgtgagccac 11
Score = 48.1 bits (24), Expect = 2e-04
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||||||| ||||||||| ||| ||| ||| |||||||||||
Sbjct: 9 cggtggctcacgcctgtaattccagcaccttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AANU01276448.1/2367-2648 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 178 bits (90), Expect = 6e-44
Identities = 220/262 (83%), Gaps = 4/262 (1%)
Strand = Plus / Minus
Query: 2 tcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgc 61
|||||||| || |||||||| |||| |||||| ||||||| ||||||||||||| | |||
Sbjct: 270 tcactcttgttgcccaggctggagtgcaatggcgcgatctcggctcactgcaaattttgc 211
Query: 62 ctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcact 119
||||| | |||||| |||||||||| ||||||||| ||||||||||||| |||||||
Sbjct: 210 ctcctagattcaagtgattctcctgtctcagcctcctgagtagctgggatttcaggcacc 151
Query: 120 cgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttgg 179
||||||| |||||||| ||||||||| ||||||| |||||||| || |||
Sbjct: 150 agccaccaggcccagcta-atttttgtatttttagtagagac-gggtttcactatattgt 93
Query: 180 ccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgc 239
|||||||||||| |||||||||| ||||| ||||||||| ||| |||||||||||||||
Sbjct: 92 ccaggctggtctggaactcctgacctcaggtgatccacccacctcggcctcccaaagtgc 33
Query: 240 tggaatttcaggtgtgagccac 261
||| ||| |||| |||||||||
Sbjct: 32 tgggattacaggcgtgagccac 11
Score = 52.0 bits (26), Expect = 1e-05
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;ABGA01172272.1/9412-9694 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 176 bits (89), Expect = 3e-43
Identities = 215/257 (83%), Gaps = 3/257 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || |||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 260 acccaggctggagtgcagtggtgcaatcttggctcactgcaacctccacctcctgggttc 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
|||| ||||||||| ||||||||| ||||||||||||||||||| ||||| |||||
Sbjct: 200 aagcaattctcctgcctcagcctcctgagtagctgggattacaggcgtgcgccagcacac 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
||||||| ||||||||| || |||| | |||||| || ||||||||| |||||
Sbjct: 140 ccagcta-atttttgtatttttagtaaagacagagtttcaccacattggccaggttggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
| |||||| ||| ||| | ||||||||||||| ||||||||||||||||| ||| |||
Sbjct: 81 ccgaactcccgacctcaagtgatccacccgcctcagcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccactgtgcc 267
| |||||||||||||||
Sbjct: 21 gcgtgagccactgtgcc 5
Score = 65.9 bits (33), Expect = 7e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||| |||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 4 gggcacagtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
Score = 46.1 bits (23), Expect = 6e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 548 cttgaaccaaggagttcaaggctgcagtgagctatgactgcatcactgcactccagcccg 607
|||||||| ||||| | ||| |||||||||| | || |||| ||||||||||||||| |
Sbjct: 198 cttgaacccaggaggtggaggttgcagtgagccaagattgcaccactgcactccagcctg 257
Query: 608 ggggaca 614
|| ||||
Sbjct: 258 ggtgaca 264
>RF00017;Metazoa_SRP;ABGA01352550.1/26374-26093 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 176 bits (89), Expect = 3e-43
Identities = 221/265 (83%), Gaps = 4/265 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||||||||||| ||| ||| | || |||||
Sbjct: 271 ttcactcttgttgcccaggctggagtgcaatggtgcgatctcggcccaccggaacctctg 212
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||
Sbjct: 211 cctcctgggttcaagcgattctcctgtctcagcatcctgagtagctgggattacaggcat 152
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
| |||||| ||||||| ||||||||| |||||||||| |||| |||||||
Sbjct: 151 gcaccaccatgtccagcta--attttgtatttttagtagagacgggctttctccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
| ||||||||||| |||||| ||| ||||| ||||| || ||||||||||||||||| |
Sbjct: 93 gtcaggctggtctggaactcccgacctcaggtgatccgcctgccttggcctcccaaagcg 34
Query: 239 ctggaatttcaggtgtgagccactg 263
||| ||| |||| |||||||||||
Sbjct: 33 ttgggattacaggcgtgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||||| ||||| |||||
Sbjct: 11 gtggctcacgcctgtaatcccaacgctttgggaggc 46
>RF00017;Metazoa_SRP;AADA01244850.1/579-296 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 176 bits (89), Expect = 3e-43
Identities = 221/265 (83%), Gaps = 3/265 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||||| ||||| |||||||||||| | ||||||
Sbjct: 268 ctcttgttgcccaggctggagtgcaatggtgtgatctcggctcactgcaacttttgcctc 209
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 208 ctgggttcaagcaattctcctgtctcagcctcccaagtagctgggattacaggcacatgc 149
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||||| |||||||| ||||||||| || |||| |||||||||||| |||| ||
Sbjct: 148 caccatgcccagcta-atttttgtatttttagtacagacagggtttcatcatattggtca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
| ||||||| |||||||||| ||||| |||| ||| ||| |||||||||| ||||||
Sbjct: 89 gactggtcttgaactcctgacctcaggtgatctgcccacctcggcctcccaagttgctgg 30
Query: 243 aatttcaggtgtgagccactgtgcc 267
||| |||| ||||||||| ||||
Sbjct: 29 gattacaggcatgagccactatgcc 5
>RF00017;Metazoa_SRP;AACZ02104256.1/16707-16427 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 176 bits (89), Expect = 3e-43
Identities = 194/228 (85%), Gaps = 5/228 (2%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcc 95
||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct: 233 atcttggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctctgcctcc 174
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
||||||||||||| ||||||| ||||||||| |||||||| ||||||||| |
Sbjct: 173 taagtagctgggatcacaggcatccgccaccacgcccagcta-atttttgtatttttaat 115
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
|||||| ||||| |||||||| ||||||||||| |||||||||| ||||| ||||
Sbjct: 114 agagac--agtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatct 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
||||||| |||||||||||||||||| ||| |||| ||||| |||||
Sbjct: 56 gcccgcctcggcctcccaaagtgctgggattacaggcgtgaggcactg 9
>RF00017;Metazoa_SRP;AADA01128011.1/3967-4247 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 176 bits (89), Expect = 3e-43
Identities = 209/249 (83%), Gaps = 3/249 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| ||| || |||||| ||| |||||||||||| ||||||||
Sbjct: 268 ctcttgttgcccaggctgtagtgcagtggtgcagtctcggctcactgcaacttctgcctc 209
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
||||||| |||||||||||||| ||||||||| ||||||| ||||||||||||| | |
Sbjct: 208 ctgggtttaagcgattctcctgactcagcctccttagtagcttggattacaggcacccac 149
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|||||| ||| |||| ||||||||| ||||||| | |||||| |||||||||||
Sbjct: 148 caccacgcccggctaagtttt-gtatttttagtagagacagagtttcaccatgttggcca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
||||||||| |||||||||| ||| | ||||||||| ||||||||||||||||||||||
Sbjct: 89 ggctggtcttgaactcctgacctcaagtgatccacccaccttggcctcccaaagtgctgg 30
Query: 243 aatttcagg 251
||| ||||
Sbjct: 29 gattacagg 21
>RF00017;Metazoa_SRP;AC067855.6/19413-19132 9606:Homo sapiens
(human)
Length = 282
Score = 176 bits (89), Expect = 3e-43
Identities = 209/249 (83%), Gaps = 4/249 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||| || || |||||||||||| |||||||||
Sbjct: 267 ctctttttgcccaggctggagtacaatggcatgacctcggctcactgcaacctctgcctc 208
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
|||||||||||||||||||||| ||||||| | |||||||||||||||||||| |||
Sbjct: 207 ctgggttcaagcgattctcctgcctcagccttctgagtagctgggattacaggcatgcgc 148
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|||||| |||||||| ||||||||| ||||||| ||||||| ||||||| ||
Sbjct: 147 caccacgcccagcta--actttgtatttttagtagagacagggtttctccatgttgatca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
|||||||||| |||||||||| ||||| ||||| ||| ||| |||||||||||||||||
Sbjct: 89 ggctggtctcgaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgg 30
Query: 243 aatttcagg 251
||| ||||
Sbjct: 29 gattacagg 21
Score = 48.1 bits (24), Expect = 2e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 368 gcctgtaatcccaacactttgagaggctgagg 399
||||||||||||| ||||||| ||||||||||
Sbjct: 20 gcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AADD01037694.1/6621-6905 9606:Homo sapiens
(human)
Length = 285
Score = 176 bits (89), Expect = 3e-43
Identities = 212/252 (84%), Gaps = 5/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || |||||| |||| |||||||||| ||||||||||||||||||
Sbjct: 261 cccaggctggagtgcactggtgcaatctcagctcactgcagcctctgcctcctgggttca 202
Query: 74 agcgattctcctg--tcagcctcccaag--tagctgggattacaggcactcgccaccaca 129
||||||||||||| ||||||||| || ||||||||||||||||| | | ||||||||
Sbjct: 201 agcgattctcctgcctcagcctccttagagtagctgggattacaggcgcccaccaccaca 142
Query: 130 cccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggt 189
|||||||| ||||||||| |||||| |||||||| |||||||||||||| |||
Sbjct: 141 cccagctaattttt-gtatttttagtagagatggggtttcgccatgttggccaggcaggt 83
Query: 190 ctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttca 249
||| || ||||||| |||||| ||||| || ||| ||||||||||||||||| ||| ||
Sbjct: 82 ctcgaaatcctgacctcaggcaatccatccacctcagcctcccaaagtgctgggattaca 23
Query: 250 ggtgtgagccac 261
| ||||||||||
Sbjct: 22 gctgtgagccac 11
>RF00017;Metazoa_SRP;CABD01014788.1/6794-7076 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 176 bits (89), Expect = 3e-43
Identities = 187/220 (85%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
||||||||||| ||| ||||||||||||||||| ||||||||||| | ||||| ||||
Sbjct: 229 gctcactgcaacctccgcctcctgggttcaagcaattctcctgtctcaacctcctgagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
||||||||||||||||| | ||||||| |||||||| ||||||||| |||||||
Sbjct: 169 gctgggattacaggcacgcaccaccacgcccagctaatttttggtatttttagtagagac 110
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||| |||||||||||||||||| | |||||||||| ||||||| || ||| |
Sbjct: 109 agggtttcaccatgttggccaggctggt-ttgaactcctgacctcaggcgttctgcccac 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
||||||||||||||||||||| ||| |||| ||||||||
Sbjct: 50 cttggcctcccaaagtgctgggattacaggcatgagccac 11
Score = 50.1 bits (25), Expect = 4e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggc 394
||||||||| ||||||||||||| ||||||| |||||
Sbjct: 10 ggtggctcatgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;ABGA01015944.1/10578-10296 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 174 bits (88), Expect = 1e-42
Identities = 211/252 (83%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||| |||||| |||||||||||| ||||||||||||||||||
Sbjct: 259 cccaggctggagtgcagtggcacgatctcggctcactgcaacctctgcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| ||||||||| || |||||||||||||||| |||||||| ||
Sbjct: 199 agcgattctcctgcctcagcctcctgagaagctgggattacaggcgtccgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||| ||||||||| |||||||| ||||||| ||||||| ||||||||||||
Sbjct: 139 tggctaattttt-gtatttttagtagagacgtggtttcaccatgttgaccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||| ||||| ||||| |||||||||||||||||||||||| ||| ||||
Sbjct: 80 tgaactcctgacatcaggtaatccattcgccttggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
||||||||||
Sbjct: 20 catgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 11 gtggctcatgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AADA01154913.1/2126-1844 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 174 bits (88), Expect = 1e-42
Identities = 199/236 (84%), Gaps = 3/236 (1%)
Strand = Plus / Minus
Query: 28 caatggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg- 86
||||||||| |||| ||||||||||| |||||||||||||||| |||| |||||||||
Sbjct: 245 caatggtgcaatctctgctcactgcaacctctgcctcctgggtttaagccattctcctgc 186
Query: 87 -tcagcctcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnng 145
|||||||||| ||||||||||||||||| | |||||||||||||||||| |
Sbjct: 185 ctcagcctcccgagtagctgggattacagatgcccgccaccacacccagcta-atttttg 127
Query: 146 tatttttantagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgt 205
|||||||| || ||| ||| ||||| |||||||||||||||||| |||||||||||| |
Sbjct: 126 tatttttagtacagatgggatttcactatgttggccaggctggtcacaaactcctgacct 67
Query: 206 caggcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
||||||||||| || ||| ||||||||| ||||||| ||| |||| ||||||||
Sbjct: 66 caggcgatccatccccctcagcctcccaaggtgctgggattacaggcatgagccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||| ||||||||| ||||||||||||| ||| ||| ||||||||||
Sbjct: 4 gggcatggtggctcatgcctgtaatcccagcaccttgggaggctgagg 51
>RF00017;Metazoa_SRP;AACZ02003140.1/751-470 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 174 bits (88), Expect = 1e-42
Identities = 214/256 (83%), Gaps = 4/256 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 258 cccaggctggagtgcagtggtgtgatcttggctcactgcaacctctgcctcctgggttcc 199
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|| ||||||||| |||||||||| ||||||||||| |||||| | |||||||||||
Sbjct: 198 tgccattctcctgcctcagcctccctagtagctgggactacaggtgcctgccaccacacc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| ||||||||| |||||||||||||||| |||| |||| | ||||||
Sbjct: 138 cggcta--attttgtatttttagtagagacggggtttcactgtgttagccaagatggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| | |||||||| |||||| |||| ||||||| ||||||||||||||||| ||| ||||
Sbjct: 80 cgatctcctgacctcaggcaatccgcccgcctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactgtgcc 267
||||||||| |||||
Sbjct: 20 cgtgagccaccgtgcc 5
Score = 73.8 bits (37), Expect = 3e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||||||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 4 gggcacggtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AADA01339504.1/248-529 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 174 bits (88), Expect = 1e-42
Identities = 187/220 (85%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
|||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 229 gctcactgtaacctctgcctcctgggttcaagcgattctcctgtctcagcctcctgagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
|||||||||||||| | ||||| | |||| |||| ||||||||| |||||||
Sbjct: 169 gctgggattacaggtccctgccactaaacccggctaatgttt-gtatttttagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||||||||||| |||||||||||||||||||||||| ||| | ||||| ||| |
Sbjct: 110 agggtttcatcatgttgaccaggctggtctcaaactcctgacctcaagtgatccgccctc 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| ||||||||||||||||||||| |||| ||||||||
Sbjct: 50 ctcagcctcccaaagtgctggaattacaggcatgagccac 11
Score = 48.1 bits (24), Expect = 2e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 432 ccagcctggacaacagagcaagactccgtctc 463
||||||||| | ||||||||||||||||||||
Sbjct: 249 ccagcctgggcgacagagcaagactccgtctc 280
>RF00017;Metazoa_SRP;AL357500.17/74632-74351 9606:Homo sapiens
(human)
Length = 282
Score = 174 bits (88), Expect = 1e-42
Identities = 214/256 (83%), Gaps = 4/256 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||||| |||||||||||||||||| ||| |||||||||||||
Sbjct: 258 cccaggctggagtgcagtggtgtgatcttggctcactgcaacctccgcctcctgggttcc 199
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|| ||||||||| |||||||||| ||||||||||| |||||| | |||||||||||
Sbjct: 198 tgccattctcctgcctcagcctccctagtagctgggactacaggtgcctgccaccacacc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| ||||||||| |||||||||||||||| |||| |||| | ||||||
Sbjct: 138 cggctaatttt--gtatttttagtagagacggggtttcactgtgttagccaagatggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| | |||||||| |||||| |||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 80 cgatctcctgacctcaggcaatccacccgcctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactgtgcc 267
||||||||| |||||
Sbjct: 20 cgtgagccaccgtgcc 5
Score = 73.8 bits (37), Expect = 3e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||||||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 4 gggcacggtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AC024569.5/84086-83786 9606:Homo sapiens
(human)
Length = 301
Score = 174 bits (88), Expect = 1e-42
Identities = 217/260 (83%), Gaps = 4/260 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||| |||||| ||||||||||| |||||||||| |||||||
Sbjct: 258 cccaggctggagtgcaatggcacgatctcagctcactgcaacctctgcctcccgggttca 199
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| ||||||||| |||||||||||||||||||| ||||||| ||
Sbjct: 198 agcgattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccatgcc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| ||||||||| |||||||| || ||| |||||||| ||||||| |||
Sbjct: 138 cggctaatttt--gtatttttagtagagacgagggttctccatgttggtcaggctgatct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||||| ||||| ||||| ||| ||| ||||||||||||||||| ||| ||||
Sbjct: 80 caaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactgtgcctggc 271
||||||||| | |||||||
Sbjct: 20 cgtgagccaccgcgcctggc 1
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AADB02035138.1/25911-26193 9606:Homo sapiens
(human)
Length = 283
Score = 174 bits (88), Expect = 1e-42
Identities = 217/260 (83%), Gaps = 3/260 (1%)
Strand = Plus / Minus
Query: 4 actcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcct 63
|||||| || |||||||| |||| || ||||||||||| ||||||||||| ||| |||
Sbjct: 269 actcttgttgcccaggctggagtgcagtggtgcgatctcagctcactgcaacctccacct 210
Query: 64 cctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcg 121
||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||| | ||
Sbjct: 209 cctgggttcaagccattctcctgtctcagcctcctgagtagctggcattacaggcgcccg 150
Query: 122 ccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcc 181
||||||||||| |||| ||||||||| |||||| ||||||||| ||| |||| |
Sbjct: 149 ccaccacacccggcta-atttttgtatttttagtagagatggggtttcagcatattggtc 91
Query: 182 aggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctg 241
|||| |||| |||||||||| ||||| ||||||||||||| ||||||||||||||||
Sbjct: 90 aggccagtctggaactcctgacctcaggtgatccacccgcctcagcctcccaaagtgctg 31
Query: 242 gaatttcaggtgtgagccac 261
| || |||| |||||||||
Sbjct: 30 ggatgacaggcgtgagccac 11
Score = 58.0 bits (29), Expect = 2e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||| |||||||||| |||||| |||||| ||||||| |||||||||||
Sbjct: 4 gggcgcggtggctcacgcctgtcatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AC008040.7/187594-187869 9606:Homo sapiens
(human)
Length = 276
Score = 174 bits (88), Expect = 1e-42
Identities = 209/250 (83%), Gaps = 10/250 (4%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 252 cccaggctggagtgcagcggtgcgatcttggctcactgcaacctctgcctcctgagttca 193
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| | ||||||| ||||||||||| ||||||| | ||||||
Sbjct: 192 agcaattctcctgccccagcctcctgagtagctgggactacaggcgc-------cacacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| ||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 139 cggctaattttt-gtatttttagtagagacggggtttcaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| |||| ||||||||| ||| ||||||||||| |||||| ||| ||||
Sbjct: 80 cgaactcctgacctcagatgatccacccacctcggcctcccaaaatgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
>RF00017;Metazoa_SRP;ABBA01006866.1/94594-94312 9606:Homo sapiens
(human)
Length = 283
Score = 174 bits (88), Expect = 1e-42
Identities = 187/220 (85%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
||||||||| | |||||| ||||||||| |||| ||| ||| ||| |||||||||||||
Sbjct: 229 gctcactgccacctctgcttcctgggttaaagccattttcccgtctcagcctcccaagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
|||||||||||||||| ||||||||| |||||||| ||||||||| ||||||
Sbjct: 169 gctgggattacaggcatccgccaccacgcccagctaattttt-gtatttttagtagagat 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
| ||||||| |||| |||||||||||||||| |||||||||| ||||| |||||||| |
Sbjct: 110 gaggtttcaccatgctggccaggctggtctcgaactcctgacctcaggtaatccacccac 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| |||||||||||||||||| ||| ||| ||||||||||
Sbjct: 50 ctcggcctcccaaagtgctgggattacagatgtgagccac 11
>RF00017;Metazoa_SRP;AANU01271722.1/20306-20588 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 174 bits (88), Expect = 1e-42
Identities = 210/251 (83%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || ||| | | ||||||||||| ||| ||| |||||||||||||
Sbjct: 260 acccaggctggagtgcagtggcgaggtcttggctcaccgcagtctccgcctcctgggttc 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
||| ||||||||| ||| ||||| |||||||||||||||||||| |||||||||||
Sbjct: 200 cagcaattctcctgcatcaacctcctgagtagctgggattacaggcatccgccaccacac 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
|||||| ||||||||| ||||||| | |||||| | ||||||| ||||||||
Sbjct: 140 ccagct-gagttttgtatttttagtagagacagagtttcaccgtgttggctgggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| || ||||||| |||| |||||||||||||||||||||||||||||||| ||| |||
Sbjct: 81 tcgaattcctgacctcagatgatccacccgccttggcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccac 261
|||||||||||
Sbjct: 21 gtgtgagccac 11
>RF00017;Metazoa_SRP;AANU01205720.1/10593-10874 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 174 bits (88), Expect = 1e-42
Identities = 196/232 (84%), Gaps = 3/232 (1%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcc 95
|||| |||||||||||| |||||||||||||||||| || ||||||||||| |||||||
Sbjct: 235 atctcggctcactgcaacctctgcctcctgggttcaggccattctcctgtctcagcctcc 176
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
||||||||||| ||||| | ||||||||| |||||||| ||||||||| |
Sbjct: 175 tgagtagctgggactacagatgcccgccaccacgcccagctaattttt-gtatttttagt 117
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
| ||||||| ||||| |||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 116 acagacgggatttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatcc 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcc 267
||| |||| | |||| ||||||||||| ||| |||| ||||||||| |||||
Sbjct: 56 acctgcctcgacctctcaaagtgctgggattacaggcgtgagccacagtgcc 5
Score = 60.0 bits (30), Expect = 4e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagagg 393
|||||| |||||||| ||||||||||||| ||||||||||||
Sbjct: 4 gggcactgtggctcacgcctgtaatcccagcactttgagagg 45
Score = 48.1 bits (24), Expect = 2e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 432 ccagcctggacaacagagcaagactccgtctc 463
||||||||| ||||||||||||||||| ||||
Sbjct: 249 ccagcctgggcaacagagcaagactccatctc 280
>RF00017;Metazoa_SRP;ABGA01300331.1/1695-1412 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 172 bits (87), Expect = 4e-42
Identities = 214/258 (82%), Gaps = 2/258 (0%)
Strand = Plus / Minus
Query: 6 tcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcc 65
|||| ||||||||||| |||| ||| |||| |||| |||||||| || ||||||||||
Sbjct: 268 tcttgttacccaggctggagtgcaacagtgcaatctcagctcactgtaacctctgcctcc 209
Query: 66 tgggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgcc 123
||||||||||| ||||||||||| ||||||| |||||||||||||||||| | | ||
Sbjct: 208 tgggttcaagcaattctcctgtctcagcctcctgagtagctgggattacaggtgcccacc 149
Query: 124 accacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggccag 183
|| || || |||| ||||||||| ||||||||| |||||| ||||| ||||||
Sbjct: 148 actacgcctggctaatttttggtatttttagtagagacggagtttcaccatgtgggccag 89
Query: 184 gctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgga 243
|||||||| ||| |||||| ||||| |||||||| |||| ||||||||||||||||||
Sbjct: 88 gctggtcttgaacccctgacctcaggtgatccacctgcctcggcctcccaaagtgctggg 29
Query: 244 atttcaggtgtgagccac 261
||| |||| |||||||||
Sbjct: 28 attacaggcgtgagccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
||||||||| ||||||||||||| ||||||| ||||| ||||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggccgaggca 53
>RF00017;Metazoa_SRP;AADA01011428.1/7525-7243 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 172 bits (87), Expect = 4e-42
Identities = 210/251 (83%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| |||| ||| |||| |||||||||||| ||||||||||||||||
Sbjct: 260 acccaggctggagtgcaatcatgctatctcggctcactgcaacttctgcctcctgggttc 201
Query: 73 aagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacac 130
|||||||||||||||| | ||||| ||| | |||||||||||||| | || ||||||
Sbjct: 200 aagcgattctcctgtctcaacctcctgagtggttgggattacaggcatccaccgccacac 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
|| |||| ||||||||| ||||||| ||||||| |||||||| ||| ||||||
Sbjct: 140 ccggctaattttt-gtatttttagtagagaccaggtttcaccatgttggtcagactggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| |||||||||| ||||| ||||| || ||||||||||||||||||||||| ||| |||
Sbjct: 81 tcgaactcctgacctcaggtgatccgcctgccttggcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccac 261
|||||| ||||
Sbjct: 21 gtgtgaaccac 11
>RF00017;Metazoa_SRP;AACZ02080413.1/42671-42952 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 172 bits (87), Expect = 4e-42
Identities = 219/263 (83%), Gaps = 4/263 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| || | || ||| | |||||| |||||||||| |||||
Sbjct: 271 ttcactcttgttgcccaggctggaatgcagtggcacaatcttgtctcactgcaacctctg 212
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
||||||||||| ||| |||||||| ||||||||| ||||||| ||| ||||||||
Sbjct: 211 cctcctgggtttaagtgattctcccacctcagcctcctcagtagctaggactacaggcat 152
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
| |||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 151 gctccaccacacccagctaatttt--gtatttttagtagagacggggtttcatcatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
| ||||||||||||||||||||||| ||| | | ||| ||||||| ||||||||| |||
Sbjct: 93 gtcaggctggtctcaaactcctgacctcaagtggtccgcccgcctcagcctcccaaggtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| |||| |||||||||
Sbjct: 33 ctgggattacaggcgtgagccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||||||| ||||||||||||| ||| ||| |||||||||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcaccttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AADA01011652.1/12634-12916 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 172 bits (87), Expect = 4e-42
Identities = 192/227 (84%), Gaps = 3/227 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| ||| || ||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 259 cccaggctggagcgcagtggtgcgatctcggctcactgcaacctctgcctcctgggttca 200
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| |||| |||||| ||||||| | ||||||||| || ||| | ||||||||| ||
Sbjct: 199 agccattcccctgtctcagcctcctgaatagctgggactataggtgcgcgccaccacgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| ||||||||| || ||||||||||||| |||||||| |||||||||||
Sbjct: 139 cggctaattttt-gtatttttagtacagacggggtttcaccatgttggtcaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
|||||||||||| ||||| ||||||||||||| |||||||||||||
Sbjct: 80 caaactcctgacctcaggtgatccacccgcctcagcctcccaaagtg 34
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||| | || |||||||||||||||||| |||||||||||
Sbjct: 10 ggtggcttatgcttgtaatcccaacactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AADA01002908.1/3722-3440 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 172 bits (87), Expect = 4e-42
Identities = 209/250 (83%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||||||||||| |||||||||||| ||| ||||||| ||||||
Sbjct: 259 cccaggctggagtgcagtggtgcgatctcggctcactgcaacctccgcctcctaggttca 200
Query: 74 agcgattctcctgtca--gcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||||| | ||||||||||||||||||||||||| ||||||||| ||
Sbjct: 199 agcaattctcctgtctcggtctcccaagtagctgggattacaggcgtccgccaccacgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| | |||||| |||||| ||| ||||| ||||||||||||||||||||
Sbjct: 139 cggctaatttttc-tgtttttagtagagatgggctttcaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||| ||| | ||| ||||||||| ||||||||||||||||| ||| ||||
Sbjct: 80 tgaactcctgacctcaagtgattcacccgcctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;ABBA01058676.1/46559-46844 9606:Homo sapiens
(human)
Length = 286
Score = 172 bits (87), Expect = 4e-42
Identities = 212/253 (83%), Gaps = 6/253 (2%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 262 cccaggctggagtgcaatggtgcgatctcggctcactgcaacctctgcctcctgggttca 203
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||| | ||||||||| ||||||||||||||||||||| | ||| || ||
Sbjct: 202 agcaattctccagcctcagcctcctgagtagctgggattacaggcacccaccatcatgcc 143
Query: 132 cagctannnnnnngta---tttttantagagacggggtttcatcatgttggccaggctgg 188
|||||| ||| |||||| ||||||| |||||||| |||||||| |||||| |
Sbjct: 142 cagcta-atttttgtattttttttagtagagacagggtttcaccatgttggtcaggctag 84
Query: 189 tctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttc 248
|||| |||||||||| ||||| ||||||||| ||| |||||||||| |||||| ||| |
Sbjct: 83 tctcgaactcctgacctcaggtgatccacccacctcagcctcccaaactgctgggattac 24
Query: 249 aggtgtgagccac 261
||| || ||||||
Sbjct: 23 aggcgtaagccac 11
Score = 48.1 bits (24), Expect = 2e-04
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||| |||||||| | ||||||||||||| || |||| ||||||||||
Sbjct: 4 gggcgcggtggcttacgcctgtaatcccagcagtttgggaggctgagg 51
>RF00017;Metazoa_SRP;ABBA01038406.1/5117-5399 9606:Homo sapiens
(human)
Length = 283
Score = 172 bits (87), Expect = 4e-42
Identities = 210/251 (83%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| ||| || ||| |||||| |||||||||||| |||||||||||| ||||
Sbjct: 260 acccaggctgcagtgcagtggggcgatcccggctcactgcaacctctgcctcctgagttc 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
|||| ||||||||| ||||||||| ||||||||||||||||||| | ||||||| |
Sbjct: 200 aagcaattctcctgcctcagcctccttagtagctgggattacaggcgtgcaccaccacgc 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
| |||| ||||||||| ||||||| |||||||| |||||||||||||||||||
Sbjct: 140 ctggctaattttt-gtatttttagtagagacagggtttcaccatgttggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| |||||||||| ||||| ||||||||| ||| ||||||||||||||||| ||| |||
Sbjct: 81 tcgaactcctgacctcaggtgatccacccacctcagcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccac 261
| | |||||||
Sbjct: 21 gagagagccac 11
Score = 46.1 bits (23), Expect = 6e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 369 cctgtaatcccaacactttgagaggctgagg 399
|||||||||||| ||||||| ||||||||||
Sbjct: 21 cctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AADB02009732.1/81584-81866 9606:Homo sapiens
(human)
Length = 283
Score = 172 bits (87), Expect = 4e-42
Identities = 211/251 (84%), Gaps = 5/251 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggtt-c 72
|||||||| |||| |||||| || ||| ||||||||||| |||||||||| |||| |
Sbjct: 259 cccaggctggagtgcaatggcgctttctcagctcactgcaacctctgcctcccaggtttc 200
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
| | |||| ||||| |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 199 aggtgattttcctgcctcagcctcccaagtagctgggactacaggcatgagccaccacac 140
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
||||||| ||||||||| || ||| | |||||| |||||||||||||||||||
Sbjct: 139 ccagctaatttt--gtatttttagtacagatgaagtttcaccatgttggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| |||||||||| ||||| ||||||||| ||| |||||||||||||||||| ||| |||
Sbjct: 81 tcgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccac 261
|||||||||||
Sbjct: 21 gtgtgagccac 11
Score = 48.1 bits (24), Expect = 2e-04
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||| |||||||||| |||||||||||| ||||||| ||||| ||||
Sbjct: 4 gggcgcggtggctcacacctgtaatcccagcactttgggaggccgagg 51
Score = 48.1 bits (24), Expect = 2e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 432 ccagcctggacaacagagcaagactccgtctc 463
||||||||| |||||||||||||||| |||||
Sbjct: 250 ccagcctgggcaacagagcaagactctgtctc 281
>RF00017;Metazoa_SRP;AADA01162279.1/17288-17006 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 170 bits (86), Expect = 2e-41
Identities = 209/250 (83%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||||| | ||||||||| |||||| ||||||||||||||||||
Sbjct: 259 cccaggctggagtgcagtggtgtggtcttggctcgctgcaacctctgcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| ||||||||| |||||||| ||||||||||| |||||||| ||
Sbjct: 199 agcaattctcctgcctcagcctcctgagtagctgagattacaggcatgcgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| | |||| ||||||||| || ||||||||||||||
Sbjct: 139 cagcta-atttttgtatttttagtggagatggggtttcaccacagtggccaggctggtca 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||| ||||||| ||||| ||||||||| ||| ||||||||||||||||| ||| ||||
Sbjct: 80 caaattcctgacctcaggtgatccacccacctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 60.0 bits (30), Expect = 4e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AC007229.1/34014-33711 9606:Homo sapiens
(human)
Length = 304
Score = 170 bits (86), Expect = 2e-41
Identities = 180/210 (85%), Gaps = 4/210 (1%)
Strand = Plus / Minus
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
||||||||||||||| |||||| | ||||||||| ||||||||||||||||| | |
Sbjct: 213 cctcctgggttcaagtcattctctggcctcagcctcctgagtagctgggattacagacgc 154
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
||||||||||||| |||| ||||||||| |||||||||||||||| |||||||
Sbjct: 153 ccgccaccacacccggctaattttt-gtatttttagtagagacggggtttcaccatgttg 95
Query: 179 gccaggctggtctc-aaactcctgacgtcaggcgatccacccgccttggcctcccaaagt 237
|||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 94 gccaggctggtctcaaaactcctgacctcaggtgatccacccgcctcagcctcccaaagt 35
Query: 238 gctggaatttcaggtgtgagccactgtgcc 267
||||| ||| |||| ||||||||| |||||
Sbjct: 34 gctgggattacaggcgtgagccaccgtgcc 5
Score = 73.8 bits (37), Expect = 3e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||||||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 4 gggcacggtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;ABBA01030041.1/38235-38518 9606:Homo sapiens
(human)
Length = 284
Score = 170 bits (86), Expect = 2e-41
Identities = 192/228 (84%), Gaps = 4/228 (1%)
Strand = Plus / Minus
Query: 37 gatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg---tcagcct 93
|||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||
Sbjct: 237 gatcttggctcactgcaacctctgcctcctgggtttaagcgattctcctgttctcagcct 178
Query: 94 cccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtattttta 153
||||||||||||||| ||||||||| | |||||| ||| |||| |||||||||
Sbjct: 177 cccaagtagctggga-tacaggcacccaccaccatgcccggctaattttttgtattttta 119
Query: 154 ntagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgat 213
||||||| ||||||| |||||||||||||||||| | |||||||||| |||| |||
Sbjct: 118 gtagagacaaggtttcaccatgttggccaggctggttttgaactcctgacctcagatgat 59
Query: 214 ccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
| ||| ||||||||||||||| |||||| ||| |||| ||||||||
Sbjct: 58 ctgcccaccttggcctcccaaaatgctgggattacaggcatgagccac 11
>RF00017;Metazoa_SRP;CABD01229683.2/2771-3053 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 170 bits (86), Expect = 2e-41
Identities = 217/261 (83%), Gaps = 3/261 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||||| ||||| |||||||||||| |||||||||
Sbjct: 268 ctcttgttgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgcctc 209
Query: 65 ctgggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgc 122
||||||| |||| ||| | ||||| ||||||| |||||||||||| |||||| | ||
Sbjct: 208 ctgggtttaagcaattatactgtctcagcctcctgagtagctgggatcacaggcgcctgc 149
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||||| |||| ||| ||||||||| ||||||| |||||||||||| |||| ||
Sbjct: 148 caccatgccca-ctaaatttttgtatttttagtagagactgggtttcatcatattggtca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
|||||||||| |||||||||| ||||| |||| ||||||| |||||||||||||||||
Sbjct: 89 ggctggtctcgaactcctgacctcaggtaatccgcccgcctcagcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccactg 263
||| |||| ||||||||||
Sbjct: 29 gattacaggcatgagccactg 9
Score = 60.0 bits (30), Expect = 4e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 11 gtggctcatgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AANU01227068.1/29293-29008 9544:Macaca mulatta
(rhesus monkey)
Length = 286
Score = 170 bits (86), Expect = 2e-41
Identities = 188/222 (84%), Gaps = 4/222 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagta 101
||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 228 gctcactgcaacctctgcctcctgggttcaagcgattctcctgtttcagcctcctgagta 169
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
| |||||||||||| ||| |||||||||||||||| ||||||||| | |||||
Sbjct: 168 gatgggattacaggtgctcaccaccacacccagcta--attttgtatttttagtcgagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
||| ||||| |||||| ||||||||| ||||||||||||||| ||||| ||||| ||| |
Sbjct: 110 gggatttcaccatgttagccaggctgatctcaaactcctgacctcaggtgatccgcccac 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
|| || |||||||| ||||| ||| |||| ||||||||||
Sbjct: 50 ctcagcgtcccaaagcgctgggattacaggcatgagccactg 9
>RF00017;Metazoa_SRP;AANU01097208.1/5934-5652 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 170 bits (86), Expect = 2e-41
Identities = 208/249 (83%), Gaps = 3/249 (1%)
Strand = Plus / Minus
Query: 15 ccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaa 74
||||||| |||| ||||||||| |||| |||||||||||| ||||| |||||||||||||
Sbjct: 258 ccaggctggagtgcaatggtgcaatctcggctcactgcaacctctgtctcctgggttcaa 199
Query: 75 gcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacaccc 132
|| |||||||| ||| |||||| | ||||||||||||||||| |||||||||||||
Sbjct: 198 gccgttctcctgcctcaacctcccgaagagctgggattacaggcatccgccaccacaccc 139
Query: 133 agctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctc 192
||||| |||||||| ||||||||| |||||| |||||||||||||||||||||
Sbjct: 138 agctaattttta-tatttttagtagagacggagtttcaccatgttggccaggctggtctc 80
Query: 193 aaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggt 252
|||||||||| |||| ||||||||| ||| || | ||||||| |||| ||| ||||
Sbjct: 79 gaactcctgacctcagatgatccacccacctcagctttccaaagtactgggattacaggc 20
Query: 253 gtgagccac 261
||||||||
Sbjct: 19 atgagccac 11
>RF00017;Metazoa_SRP;ABGA01104451.1/3243-3524 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 168 bits (85), Expect = 6e-41
Identities = 223/269 (82%), Gaps = 4/269 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||||||||||| ||||||||||| ||| |||||
Sbjct: 267 ctcttgttgcccaggctggagtgcaatggtgcgatctcagctcactgcaacctccgcctc 208
Query: 65 ctgggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgc 122
||||||||||| || | |||||| ||||||| |||||||||||||||||||| ||
Sbjct: 207 ctgggttcaagtcatacccctgtctcagcctcctgagtagctgggattacaggcatgtgc 148
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||||| ||| | || ||||||||| || ||||||||||||| |||||||| ||
Sbjct: 147 caccatgcccgggtaatttt--gtatttttagtaaagacggggtttcaccatgttggtca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
|||||||||| |||||| ||| || || ||||||||| ||| ||||||||||||||||||
Sbjct: 89 ggctggtctcgaactcccgacctccggtgatccacccacctcggcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccactgtgcctggc 271
||| |||| ||||||||| ||||||||
Sbjct: 29 gattacaggagtgagccaccatgcctggc 1
Score = 46.1 bits (23), Expect = 6e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 353 ggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||| ||||||||| |||||||||||| ||||||| ||||| ||||
Sbjct: 5 ggcatggtggctcactcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;ABGA01271553.1/7493-7774 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 168 bits (85), Expect = 6e-41
Identities = 211/252 (83%), Gaps = 4/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
||||||||||||| |||||||| ||||| ||||||| |||| ||||||||||||||||||
Sbjct: 258 cccaggctagagtgcaatggtgtgatctcggctcacagcaacctctgcctcctgggttca 199
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|||| |||||||| ||||||||| ||||| ||||| ||||||||| |||||||||||
Sbjct: 198 agcgcttctcctgcctcagcctcctgagtaggtgggactacaggcacatgccaccacacc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||| ||| | |||||||||||||||| | ||||| | |||||||||
Sbjct: 138 cagctaattttttgta-tttcagtagagacggggtttcaccgtgttgcctaggctggtc- 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
||||||||| |||||| ||||||| |||| ||||||||||||||| | ||| ||||
Sbjct: 80 ggaactcctgagctcaggcaatccacctgcctcagcctcccaaagtgctaggattacagg 21
Query: 252 tgtgagccactg 263
|||||||||||
Sbjct: 20 cgtgagccactg 9
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||| ||||||||||| | ||||||| ||||||||||||
Sbjct: 11 gtggctcacgcctgtaatcctagcactttgggaggctgaggca 53
>RF00017;Metazoa_SRP;AACZ02040322.1/19480-19196 9598:Pan troglodytes
(chimpanzee)
Length = 285
Score = 168 bits (85), Expect = 6e-41
Identities = 211/252 (83%), Gaps = 5/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || |||||| |||| |||||||||| ||||||||||||||||||
Sbjct: 261 cccaggctggagtgcactggtgcaatctcagctcactgcagcctctgcctcctgggttca 202
Query: 74 agcgattctcctg--tcagcctcccaag--tagctgggattacaggcactcgccaccaca 129
|||||||||||| ||||||||| || ||||||||||||||||| | | ||||||||
Sbjct: 201 agcgattctcctacctcagcctccttagagtagctgggattacaggcgcccaccaccaca 142
Query: 130 cccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggt 189
|||||||| ||||||||| |||||| |||||||| |||||||||||||| |||
Sbjct: 141 cccagctaattttt-gtatttttagtagagatggggtttcgccatgttggccaggcaggt 83
Query: 190 ctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttca 249
||| || ||||||| |||||| ||||| || ||| ||||||||||||||||| ||| ||
Sbjct: 82 ctcgaaatcctgacctcaggcaatccatccacctcagcctcccaaagtgctgggattaca 23
Query: 250 ggtgtgagccac 261
| ||||||||||
Sbjct: 22 gctgtgagccac 11
>RF00017;Metazoa_SRP;AADC01024762.1/6704-6988 9606:Homo sapiens
(human)
Length = 285
Score = 168 bits (85), Expect = 6e-41
Identities = 194/229 (84%), Gaps = 4/229 (1%)
Strand = Plus / Minus
Query: 37 gatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctc 94
||||| |||||||||||| |||||||||| ||||| ||| ||| ||||||| ||||||
Sbjct: 235 gatctcggctcactgcaacctctgcctcccaggttccagcaattatcctgtctcagcctc 176
Query: 95 ccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttan 154
| | |||||||||||| || | |||||||||||||||||| |||||||||
Sbjct: 175 ctgaatagctgggattat-ggtgcccgccaccacacccagctaattttt-gtatttttag 118
Query: 155 tagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatc 214
||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 117 tagagttggggtttcatcatgttggccaggctggtctcgaactcctgacctcaggtgatc 58
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
| |||||||||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 57 cgcccgccttggcctcccaaagtgctgggattacaggcatgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 11 gtggctcatgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AC021231.8/103254-103536 9606:Homo sapiens
(human)
Length = 283
Score = 168 bits (85), Expect = 6e-41
Identities = 226/273 (82%), Gaps = 3/273 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||| ||||||| ||||||||||| || |
Sbjct: 272 ttcactcttgttgcccaggctggagtgcaatggcgcgatctcagctcactgcaaccttta 213
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
||||||||||||||| ||||||||| ||||| ||| ||||||||| ||||||||||
Sbjct: 212 cctcctgggttcaagacattctcctgcctcagcttcctgagtagctggaattacaggcat 153
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
| |||| | || |||| ||||||||| ||||||| |||||||| |||||||
Sbjct: 152 ccaccacaatgcctggctatttttt-gtatttttagtagagacagggtttcaccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
|||||||||||||| |||||||||| ||||| ||||||||| ||| ||||||||| ||||
Sbjct: 93 gccaggctggtctcgaactcctgacctcaggtgatccacccacctcggcctcccagagtg 34
Query: 239 ctggaatttcaggtgtgagccactgtgcctggc 271
|||| ||| |||| ||||||||| ||||||||
Sbjct: 33 ctgggattacaggcgtgagccaccatgcctggc 1
Score = 46.1 bits (23), Expect = 6e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 353 ggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||| ||||||||| ||||||||||||| |||| || ||||| ||||
Sbjct: 5 ggcatggtggctcacgcctgtaatcccagcactctgggaggccgagg 51
>RF00017;Metazoa_SRP;AL117344.12/53999-53717 9606:Homo sapiens
(human)
Length = 283
Score = 168 bits (85), Expect = 6e-41
Identities = 187/221 (84%), Gaps = 3/221 (1%)
Strand = Plus / Minus
Query: 43 ggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagt 100
||||||| |||| ||| |||||||| |||||||| ||||||||| ||||||||| ||||
Sbjct: 230 ggctcacagcaacctccgcctcctgcgttcaagcaattctcctgcctcagcctcctaagt 171
Query: 101 agctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagaga 160
||||||||||| || ||| | ||| || ||| |||| || |||||| ||||||
Sbjct: 170 agctgggattatagccacccaccatgacgcccggctaattttt-gtgtttttagtagaga 112
Query: 161 cggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccg 220
|||||||||| |||||||| ||||||||||| ||||||||| ||||| ||||||||||
Sbjct: 111 cggggtttcaccatgttggtcaggctggtctggaactcctgagctcaggtgatccacccg 52
Query: 221 ccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 51 ccttggcctcccaaagtgctgggattacaggtgtgagccac 11
Score = 46.1 bits (23), Expect = 6e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
|||| |||||||||| |||||||||||| ||||||| |||||
Sbjct: 4 gggcgcggtggctcacacctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AADB02002874.1/204472-204774 9606:Homo sapiens
(human)
Length = 303
Score = 168 bits (85), Expect = 6e-41
Identities = 194/229 (84%), Gaps = 4/229 (1%)
Strand = Plus / Minus
Query: 37 gatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctc 94
||||| |||||||||||| |||||||||| ||||| ||| ||| ||||||| ||||||
Sbjct: 235 gatctcggctcactgcaacctctgcctcccaggttccagcaattatcctgtctcagcctc 176
Query: 95 ccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttan 154
| | |||||||||||| || | |||||||||||||||||| |||||||||
Sbjct: 175 ctgaatagctgggattat-ggtgcccgccaccacacccagctaattttt-gtatttttag 118
Query: 155 tagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatc 214
||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 117 tagagttggggtttcatcatgttggccaggctggtctcgaactcctgacctcaggtgatc 58
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
| |||||||||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 57 cgcccgccttggcctcccaaagtgctgggattacaggcatgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 11 gtggctcatgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AADC01017461.1/2773-2491 9606:Homo sapiens
(human)
Length = 283
Score = 168 bits (85), Expect = 6e-41
Identities = 186/220 (84%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 45 ctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagtag 102
|||||||||| || |||||||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 230 ctcactgcaacctttgcctcctgggttcaagcaattctcctgcctcagcctcctaagtag 171
Query: 103 ctgggattacaggcactcgccaccacacccagctannnnnnn-gtatttttantagagac 161
||||||||||||||| | |||||| ||| |||| ||||||||| |||||||
Sbjct: 170 ctgggattacaggcatccaccaccatgcccggctaatttttttgtatttttagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||| || ||| ||||||||||||| |||||||||| ||||| ||||||||| |
Sbjct: 110 agggtttcaccacattgaccaggctggtctcgaactcctgacctcaggtgatccacccac 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| |||||||||||||||||| ||| |||| |||||||||
Sbjct: 50 ctcggcctcccaaagtgctgggattacaggcgtgagccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||| ||||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 4 gggcatggtggctcacgcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;CABD01032539.1/6244-6528 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 285
Score = 168 bits (85), Expect = 6e-41
Identities = 198/236 (83%), Gaps = 3/236 (1%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcc 95
|||| |||||||||||| ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 237 atctcggctcactgcaacctctgcctcctgggttcaagcaattctcctgtctcagcctcc 178
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
| |||||||||| ||||| | | ||||||| ||| |||| ||||||||| |
Sbjct: 177 ctggtagctgggacaacaggggcacaccaccacgcccggctaattttttgtatttttagt 118
Query: 156 agagacggggtttcatcatgttggccaggctggtctca-aactcctgacgtcaggcgatc 214
|||||| |||||||| ||| |||| || |||||||||| |||||||||| ||||| ||||
Sbjct: 117 agagacagggtttcaccatattggtcaagctggtctcagaactcctgacctcaggtgatc 58
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcctgg 270
||||| || ||||||||||||||||| ||| |||||||||||||| ||||||||
Sbjct: 57 cacccatctcagcctcccaaagtgctgggattacaggtgtgagccaccgtgcctgg 2
Score = 60.0 bits (30), Expect = 4e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 353 ggcacggtggctcaggcctgtaatcccaacactttgagaggctgag 398
|||||||||||||| |||||||||||| ||||||| |||||||||
Sbjct: 5 ggcacggtggctcacacctgtaatcccagcactttgggaggctgag 50
>RF00017;Metazoa_SRP;AANU01300249.1/24583-24300 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 168 bits (85), Expect = 6e-41
Identities = 206/248 (83%), Gaps = 2/248 (0%)
Strand = Plus / Minus
Query: 16 caggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaag 75
||||||||||| |||||| | ||||| ||||||||||| |||||||| |||||||||||
Sbjct: 258 caggctagagtgcaatggcgtgatctcagctcactgcaacctctgcctgctgggttcaag 199
Query: 76 cgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacaccca 133
||||||||||| ||||||||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 198 cgattctcctgcctcagcctcctgagtagctgggattacaggcaaccgccaccacgccca 139
Query: 134 gctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctca 193
|||| || |||| ||||||| |||||||| ||||||| ||||||||||||
Sbjct: 138 gctaatttttcatacatttagtagagacagggtttcaccatgttgtccaggctggtcttg 79
Query: 194 aactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtg 253
|| |||||| ||||| |||| || |||| ||||||||||||||||| ||| |||| |
Sbjct: 78 aattcctgagctcaggtgatctgcctgcctcagcctcccaaagtgctgggattacaggcg 19
Query: 254 tgagccac 261
||||||||
Sbjct: 18 tgagccac 11
Score = 67.9 bits (34), Expect = 2e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||| |||||||||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggca 53
>RF00017;Metazoa_SRP;ABGA01229335.1/2138-1858 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 167 bits (84), Expect = 2e-40
Identities = 186/220 (84%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagta 101
||||||||||| ||| ||||||||||| |||||||||||| | ||||||||| ||||
Sbjct: 229 gctcactgcaacttctacctcctgggtttaagcgattctcccgactcagcctcctgagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
||| ||||||||||||| | ||||||| ||| |||| ||||||||| |||||||
Sbjct: 169 gcttggattacaggcacccaccaccacgcccggctaagtttt-gtatttttagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||| |||||||||||||||||||| |||||||||| ||| | ||||||||| |
Sbjct: 110 agggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatccacccac 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
||||||||||||||||||||| ||| |||| || ||||||
Sbjct: 50 cttggcctcccaaagtgctgggattacaggcgtaagccac 11
>RF00017;Metazoa_SRP;ABGA01044195.1/22176-21894 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 167 bits (84), Expect = 2e-40
Identities = 210/252 (83%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || |||| | |||||||||||||||| || |||||||||||||||
Sbjct: 259 cccaggctggagttcagtggtacaatcttggctcactgcagcctttgcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 199 agcaattctcctgtctcagcctcctgagtagctgggactacaggcacctgccaccacacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| ||||||||| ||||||||||||||| ||| || |||| ||| ||
Sbjct: 139 cggcta-atttttgtatttttaagagagacggggtttcaccatatttttcaggttggcct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||||| ||||| ||||| || |||| ||||||||||| ||||| ||| ||||
Sbjct: 80 caaactcctgacctcaggtgatcccccagcctcagcctcccaaagagctgggattacagg 21
Query: 252 tgtgagccactg 263
||||||||||||
Sbjct: 20 tgtgagccactg 9
>RF00017;Metazoa_SRP;ABGA01088102.1/1900-1607 9601:Pongo abelii
(Sumatran orangutan)
Length = 294
Score = 167 bits (84), Expect = 2e-40
Identities = 198/236 (83%), Gaps = 3/236 (1%)
Strand = Plus / Minus
Query: 28 caatggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg- 86
|||||| |||||||||||||||||||| ||| |||||| |||| ||| ||||||||||
Sbjct: 245 caatggcgcgatcttggctcactgcaacctccgcctcccaggtttaagtgattctcctgc 186
Query: 87 -tcagcctcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnng 145
|||| |||| |||||||| |||||||||| | | |||||| |||||||| |
Sbjct: 185 ctcagtctcctgagtagctgcgattacaggcgcccaccaccaggcccagctaattttt-g 127
Query: 146 tatttttantagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgt 205
|||||||| |||||||| ||||||| || |||||||||||||||||| |||||||||| |
Sbjct: 126 tatttttagtagagacgaggtttcaccacgttggccaggctggtctcgaactcctgacct 67
Query: 206 caggcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|||| |||||||| |||| ||||||||| |||||||| ||| |||| |||||||||
Sbjct: 66 caggtgatccacctgcctcggcctcccagagtgctgggattacaggcgtgagccac 11
Score = 50.1 bits (25), Expect = 4e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||||| ||||||||||||| |||| || ||||| ||||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactctgggaggccgaggca 53
>RF00017;Metazoa_SRP;ABGA01295388.1/2260-2541 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 167 bits (84), Expect = 2e-40
Identities = 186/220 (84%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
|||||||| || ||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 229 gctcactgtaacctctgcctcctgggttcaagcgattctcctgtctcagcctccctagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
|||||||||||||| | ||||| | ||| ||||| ||||||||| | |||||
Sbjct: 169 gctgggattacaggtccctgccactaaaccgagctaatgtct-gtatttttagtggagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||||||||||| |||||||||||||||||||||||| ||| | |||| ||| |
Sbjct: 110 agggtttcatcatgttgaccaggctggtctcaaactcctgacctcaagtgatctgccctc 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| ||||||||||||||||||||| |||| ||||||||
Sbjct: 50 ctcagcctcccaaagtgctggaattacaggcatgagccac 11
Score = 48.1 bits (24), Expect = 2e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 432 ccagcctggacaacagagcaagactccgtctc 463
||||||||| | ||||||||||||||||||||
Sbjct: 249 ccagcctgggcgacagagcaagactccgtctc 280
>RF00017;Metazoa_SRP;AACZ02154330.1/4044-3762 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 167 bits (84), Expect = 2e-40
Identities = 186/220 (84%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagta 101
||||||||||| |||||||||||| |||||||| ||||||||| ||||||||| ||||
Sbjct: 229 gctcactgcaacctctgcctcctgagttcaagcaattctcctgcctcagcctccttagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
||||||||||||||| | ||||||| || |||| ||||||||| |||||||
Sbjct: 169 gctgggattacaggcgtgcaccaccacgcctggctaattttt-gtatttttagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||| |
Sbjct: 110 agggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccac 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| ||||||||||||||||| ||| |||| | |||||||
Sbjct: 50 ctcagcctcccaaagtgctgggattacaggagagagccac 11
Score = 46.1 bits (23), Expect = 6e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 369 cctgtaatcccaacactttgagaggctgagg 399
|||||||||||| ||||||| ||||||||||
Sbjct: 21 cctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AADA01020536.1/747-466 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 167 bits (84), Expect = 2e-40
Identities = 211/252 (83%), Gaps = 4/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| ||| ||||| || ||||| |||||||||||| |||||||||| |||||||
Sbjct: 258 cccaggctggagcacaatgatgtgatctcggctcactgcaacctctgcctcccgggttca 199
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||| ||| ||||||| |||||||| || |||| || | ||||||| ||
Sbjct: 198 agcgattctcccgtctcagcctcctgagtagctgtgactacaa-catgcaccaccacgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| |||||||||| ||| | ||||||||||||||||||||
Sbjct: 139 cagctaattttt-gtatttttagtagagacgggattttaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| ||||||||| ||| ||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatccaccctcctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
|||||||||||
Sbjct: 20 cgtgagccactg 9
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AADA01043475.1/5398-5680 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 167 bits (84), Expect = 2e-40
Identities = 186/220 (84%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagta 101
||||||||||| |||||||||||||||||| || ||||||||| ||||||||| ||||
Sbjct: 229 gctcactgcaagctctgcctcctgggttcacgccattctcctgcctcagcctcctgagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
||||||||||||||| | ||||||| |||||||| ||||||||| |||||||
Sbjct: 169 gctgggattacaggcgcctaccaccacgcccagctaattttt-gtatttttagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||| |||||||||||||||||||| |||||||||| ||||| ||| | |||||
Sbjct: 110 agggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatacgcccgc 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| ||||||||||||||||| || ||||||| ||||||
Sbjct: 50 ctcagcctcccaaagtgctgggatcacaggtgtcagccac 11
>RF00017;Metazoa_SRP;AADB02032022.1/472-179 9606:Homo sapiens
(human)
Length = 294
Score = 167 bits (84), Expect = 2e-40
Identities = 168/196 (85%), Gaps = 3/196 (1%)
Strand = Plus / Minus
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 199 agcgattctcctgcctcagcctcccaagtagctgggattacaggcacgcaccaccacacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||| |||||||| ||||| |||||||| | ||||||| ||||||||||||
Sbjct: 139 tggctaattttt-gtatttttggtagagtcggggttttaccatgttgaccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||| ||||| ||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 80 tgaactcctgacctcaggtgatcctcctgccttggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactgtgcc 267
|||||||||||||||
Sbjct: 20 cgtgagccactgtgcc 5
Score = 58.0 bits (29), Expect = 2e-07
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggat 408
|||||| |||||||| ||||||||||||| ||||||| ||||| ||||| ||||||
Sbjct: 4 gggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggcaggaggat 60
>RF00017;Metazoa_SRP;ABSL01062801.1/8762-9045 9606:Homo sapiens
(human)
Length = 284
Score = 167 bits (84), Expect = 2e-40
Identities = 192/227 (84%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcc-tg--tcagcctc 94
||||||||||||||||| |||||||| |||||||||||| ||| ||| || ||||||||
Sbjct: 236 atcttggctcactgcaacctctgcctgctgggttcaagcaattttccctgcctcagcctc 177
Query: 95 ccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttan 154
|| ||||| ||||||||||||| | ||||||||||||| ||| || |||||
Sbjct: 176 cccagtagatgggattacaggcgcccgccaccacacccggcttatttttc-tacttttag 118
Query: 155 tagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatc 214
||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 117 tagagacggggtttcgccatgttggtcaggctggtctcaaactcctgacctcaggtgatc 58
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|||| ||| ||||||||||||||||| ||| |||| |||||||||
Sbjct: 57 aacccacctcagcctcccaaagtgctgggattacaggcgtgagccac 11
Score = 60.0 bits (30), Expect = 4e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggctgagg 51
Score = 48.1 bits (24), Expect = 2e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 432 ccagcctggacaacagagcaagactccgtctc 463
||||||||| ||||||||||||||||| ||||
Sbjct: 251 ccagcctgggcaacagagcaagactccatctc 282
>RF00017;Metazoa_SRP;AADC01113928.1/198072-197791 9606:Homo sapiens
(human)
Length = 282
Score = 167 bits (84), Expect = 2e-40
Identities = 213/256 (83%), Gaps = 4/256 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||||| ||||||||||||||| || |||||||||||||||| |
Sbjct: 258 cccaggctggagtgcaatggtgtgatcttggctcactggaacctctgcctcctgggttta 199
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| || |||||| ||||||||| | |||||||||||||||| | | |||||| ||
Sbjct: 198 agcaatcctcctgcctcagcctcctgactagctgggattacaggtgccccccaccatgcc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| ||| ||||||| | | ||||| | |||||| |||||||| |||||||||||
Sbjct: 138 ccactaatttt--gtattttaagtggagacagagtttcaccatgttggtcaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| ||||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatccacccgcctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactgtgcc 267
|||| |||||||||||
Sbjct: 20 tgtgggccactgtgcc 5
Score = 50.1 bits (25), Expect = 4e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||| ||||| || |||||||||||| ||||||| |||||||||||
Sbjct: 4 gggcacagtggcccacacctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;ABSL01062394.1/28154-28435 9606:Homo sapiens
(human)
Length = 282
Score = 167 bits (84), Expect = 2e-40
Identities = 190/223 (85%), Gaps = 6/223 (2%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
||||||||||| ||| |||||||||||||||||||| |||||||| |||||| ||||||
Sbjct: 228 gctcactgcaacctccgcctcctgggttcaagcgatcctcctgtctcagcctcacaagta 169
Query: 102 gctgggatt-acaggcactcgccaccacacccagctannnnnnngtatttttantagaga 160
||||||||| ||||||| |||||||| ||||| || | |||| | ||||||
Sbjct: 168 gctgggatttacaggcatatgccaccacgcccagttaattttt-gcattt--agtagaga 112
Query: 161 cggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccg 220
||||||||| | |||||||||| ||||||||| |||||||||| ||||| |||||||||
Sbjct: 111 cggggtttcgttatgttggccaagctggtctcgaactcctgacctcaggtgatccaccca 52
Query: 221 ccttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
||| |||||||||||||||||| ||| ||||||||||||||||
Sbjct: 51 cctcggcctcccaaagtgctgggattacaggtgtgagccactg 9
>RF00017;Metazoa_SRP;ABSL01071688.1/6738-7020 9606:Homo sapiens
(human)
Length = 283
Score = 167 bits (84), Expect = 2e-40
Identities = 210/252 (83%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||| |||||| |||||||||| ||||||||||||||||||
Sbjct: 259 cccaggctggagtgcagtggcacgatctcagctcactgcatcctctgcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
| |||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 199 aatgattctcctgcctcagcctcccaagtagctgggattataggcatgcgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
||| || ||||||||| ||||||| || ||||| |||||||||||| |||||||
Sbjct: 139 caggtaattttt-gtatttttagtagagacaggttttcaccatgttggccagactggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||| ||| | ||||||||||||| |||||||||| |||||| ||| ||||
Sbjct: 80 tgaactcctgacctcaagtgatccacccgcctctgcctcccaaattgctgggattacagg 21
Query: 252 tgtgagccactg 263
|||||||||||
Sbjct: 20 cgtgagccactg 9
>RF00017;Metazoa_SRP;CABD01467313.2/680-387 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 294
Score = 167 bits (84), Expect = 2e-40
Identities = 180/212 (84%), Gaps = 3/212 (1%)
Strand = Plus / Minus
Query: 42 tggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaag 99
||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||
Sbjct: 231 tggctcactgcaagctctgcctcctgggttcaagcgcttctcctgcctcagcctcctgag 172
Query: 100 tagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagag 159
||||||||||||||||| | |||||||| |||||||| ||||||||| |||||
Sbjct: 171 tagctgggattacaggcgcctgccaccacgcccagcta-atttttgtatttttagtagag 113
Query: 160 acggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccaccc 219
|| |||||||| || |||||||||| | ||||| |||||||||| ||||| |||| |||
Sbjct: 112 acagggtttcaccaagttggccaggttagtctcgaactcctgacctcaggtgatctgccc 53
Query: 220 gccttggcctcccaaagtgctggaatttcagg 251
|||| |||||| ||||||||||| ||| ||||
Sbjct: 52 gcctcggcctctcaaagtgctgggattacagg 21
Score = 50.1 bits (25), Expect = 4e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 368 gcctgtaatcccaacactttgagaggctgaggc 400
||||||||||||| ||||||||||||| |||||
Sbjct: 20 gcctgtaatcccagcactttgagaggccgaggc 52
>RF00017;Metazoa_SRP;CABD01368992.2/4255-4538 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 284
Score = 167 bits (84), Expect = 2e-40
Identities = 210/251 (83%), Gaps = 4/251 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||||| ||||| ||| ||||||| ||||||||||||||||||
Sbjct: 260 cccaggctggagtacagtggtgtgatctcagcttactgcaacctctgcctcctgggttca 201
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactc-gccaccacac 130
|| |||||||||||| ||||||| |||||||||||||||||| | || ||||||| |
Sbjct: 200 agtgattctcctgtctcagcctcctgagtagctgggattacagg-agtctgccaccatgc 142
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
| |||| ||| ||||| ||||||||| |||||| |||||||||||||||||||
Sbjct: 141 ctggctaattttctgtacttttagtagagacggtgtttcaccatgttggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|| |||||||||| ||||| ||| ||||| ||| |||||||||||||||||| ||| ||
Sbjct: 81 tcgaactcctgacctcaggtgattcacccacctcggcctcccaaagtgctgggattacac 22
Query: 251 gtgtgagccac 261
| |||||||||
Sbjct: 21 gcgtgagccac 11
>RF00017;Metazoa_SRP;AANU01191172.1/2511-2793 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 167 bits (84), Expect = 2e-40
Identities = 209/251 (83%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 15 ccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaa 74
||||||| |||| |||||| | |||||||||||||||||| |||||||||||||||||||
Sbjct: 258 ccaggctggagtgcaatggcgtgatcttggctcactgcaacctctgcctcctgggttcaa 199
Query: 75 gcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacaccc 132
|| ||||||||| ||||||||| ||||||||||||||||||| | |||| || | |
Sbjct: 198 gcaattctcctgtctcagcctcctgagtagctgggattacaggcgcctaccactacgctc 139
Query: 133 agctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctc 192
|| || | |||||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 138 agttacttttta-tgtttttagtggagacggggtttcaccatgttggccaggctggtctt 80
Query: 193 aaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggt 252
|||||||||| ||| | |||| ||||||| ||||||||||||||||| ||| ||||
Sbjct: 79 gaactcctgacctcaagtgatctgcccgcctcagcctcccaaagtgctgggattacaggc 20
Query: 253 gtgagccactg 263
|||||||||||
Sbjct: 19 gtgagccactg 9
Score = 60.0 bits (30), Expect = 4e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AAHY01772147.1/228-510 10090:Mus musculus
(house mouse)
Length = 283
Score = 167 bits (84), Expect = 2e-40
Identities = 186/220 (84%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagta 101
||||||||||| |||||||| ||||||| ||| ||||||||| ||||||||| ||||
Sbjct: 229 gctcactgcaacctctgcctactgggtttaagtcattctcctgcctcagcctcctgagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
| ||||||||||||||| | ||| || |||||||| ||||||| | |||||||
Sbjct: 169 gttgggattacaggcacccaccatcatgcccagctaattttt-gtattttcagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 110 ggggtttcgccatgatggccaggctggtctcaaactcctgacctcaggtgatccacctgc 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| ||||||||||||||||| ||| ||||||||||||||
Sbjct: 50 ctcagcctcccaaagtgctgggattgcaggtgtgagccac 11
Score = 50.1 bits (25), Expect = 4e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||||| |||| ||||||| ||||||| ||||||||||||
Sbjct: 9 cggtggctcacacctgcaatcccagcactttgggaggctgaggca 53
>RF00017;Metazoa_SRP;ABGA01344231.1/3825-4107 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 165 bits (83), Expect = 1e-39
Identities = 208/250 (83%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||| || |||| ||||||||||| |||| |||||||||||||
Sbjct: 259 cccaggctggagtacactggcgcaatctctgctcactgcaacctcttcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| ||||||||| |||||||||||| |||||| | |||||||| ||
Sbjct: 199 agcgattctcctgtctcagcctcctgagtagctgggatcacaggcgcacgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||| ||||| ||||||| |||||||| ||||||| ||||||||||||
Sbjct: 139 cagctaattttttgta-ttttagtagagacagggtttcaccatgttgcccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| ||||||||| |||||| ||| | || ||| ||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgagctcaggcaatctatccacctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;ABGA01158646.1/1415-1133 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 165 bits (83), Expect = 1e-39
Identities = 218/263 (82%), Gaps = 3/263 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| || ||| |||||| ||||||||||| |||||
Sbjct: 272 ttcactcttgttgcccaggctggagtgcagtggcacgatctcagctcactgcaacctctg 213
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||||||||| |||||||| ||||||||||| |||||||
Sbjct: 212 cctcctgggttcaagcaattctcctgcctcagcctcttgagtagctgggactacaggctt 153
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
|||||||| ||| || | ||||||||| |||||||||||||||| |||||||
Sbjct: 152 gcgccaccatgcccggccaattttt-gtatttttagtagagacggggtttcaccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
|||| ||||||||| |||||||||| ||||| ||||| || || | ||||||||||||||
Sbjct: 93 gccacgctggtctcgaactcctgacctcaggtgatccgcctgcttcggcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| |||| ||||||||
Sbjct: 33 ctgggattacaggcatgagccac 11
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 11 gtggctcatgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AC195530.3/659-953 9598:Pan troglodytes
(chimpanzee)
Length = 295
Score = 165 bits (83), Expect = 1e-39
Identities = 179/211 (84%), Gaps = 3/211 (1%)
Strand = Plus / Minus
Query: 33 gtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--ag 90
||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 240 gtgcgatctcagctcaccacaacctctgcctcctgggttcaagcgattctcctgtctcag 181
Query: 91 cctcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtattt 150
||||||||| ||| |||||||| | || |||||||| ||| |||| ||||||
Sbjct: 180 cctcccaaggagcagggattactgacatgtgccaccacgcccggctaattttt-gtattt 122
Query: 151 ttantagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggc 210
||| |||||||||||||||| ||||||| |||||||||||| |||||||||| |||||
Sbjct: 121 ttagtagagacggggtttcaccatgttgaccaggctggtcttgaactcctgacctcaggt 62
Query: 211 gatccacccgccttggcctcccaaagtgctg 241
||||||||| ||| |||||||||||||||||
Sbjct: 61 gatccacccacctcggcctcccaaagtgctg 31
>RF00017;Metazoa_SRP;AADA01184445.1/19005-18723 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 165 bits (83), Expect = 1e-39
Identities = 218/263 (82%), Gaps = 3/263 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| || |||||| |||| ||||||||||| ||| |
Sbjct: 272 ttcactcttgttgcccaggctggagtgcagtggtgcaatctcagctcactgcaacctccg 213
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||||||||| ||||||||| |||||||| ||||||||| |
Sbjct: 212 cctcctgggttcaagccattctcctgtctcagcctcctgagtagctgacattacaggcgc 153
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
||||||||||||| |||| ||||||||| |||||| ||||||||| ||| |||
Sbjct: 152 ccgccaccacacccggcta-atttttgtatttttagtagagatggggtttcagcatattg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
| ||||| |||| |||||||||| ||||| |||||||| |||| |||||||||||||
Sbjct: 93 gtcaggccagtctggaactcctgacctcaggtgatccacctgcctcagcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| || |||| |||||||||
Sbjct: 33 ctgggatgacaggcgtgagccac 11
Score = 60.0 bits (30), Expect = 4e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||| |||||||||| |||||| |||||| ||||||| ||||||||||||
Sbjct: 4 gggcgcggtggctcacgcctgtcatcccagcactttgggaggctgaggca 53
>RF00017;Metazoa_SRP;AADC01130061.1/7118-6836 9606:Homo sapiens
(human)
Length = 283
Score = 165 bits (83), Expect = 1e-39
Identities = 212/255 (83%), Gaps = 3/255 (1%)
Strand = Plus / Minus
Query: 9 tattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgg 68
|||| |||||||| ||| || ||||| ||||| ||||||||||| |||||||||||||
Sbjct: 264 tattgcccaggctgtagtgcagtggtgtgatctcagctcactgcaacctctgcctcctgg 205
Query: 69 gttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccacc 126
||||||| ||||||||| ||||||| | ||||||||||| ||||||||| ||||||
Sbjct: 204 gttcaagtgattctccttcctcagccttctgagtagctgggactacaggcacaagccacc 145
Query: 127 acacccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggct 186
| |||||||| ||||||||| ||||||| ||||||| |||||| ||||||||
Sbjct: 144 atgcccagctaattttt-gtatttttagtagagacagggtttcgccatgttagccaggct 86
Query: 187 ggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatt 246
|||||| |||||||||| ||||| ||||||||||| | |||||||||| |||||| |||
Sbjct: 85 ggtctcgaactcctgacctcaggtgatccacccgcttcagcctcccaaattgctgggatt 26
Query: 247 tcaggtgtgagccac 261
|||| |||||||||
Sbjct: 25 acaggcgtgagccac 11
Score = 48.1 bits (24), Expect = 2e-04
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctga 397
||||||||| ||||||||||||| || |||| ||||||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcaatttgggaggctga 49
>RF00017;Metazoa_SRP;ABSL01064553.1/16809-16511 9606:Homo sapiens
(human)
Length = 299
Score = 165 bits (83), Expect = 1e-39
Identities = 173/203 (85%), Gaps = 4/203 (1%)
Strand = Plus / Minus
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 211 cctcctgggttcaagcgattctcctgcctcagcctctggagtagctgggattacaggcat 152
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
| |||||| |||| ||| ||||||||| ||||||| ||||||| |||||||
Sbjct: 151 gcaccaccatgcccaactaatttt--gtatttttagtagagactgggtttctccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
| |||||||||||| |||||| ||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 93 gtcaggctggtctcgaactcccgacctcaggtgatccgcccgccttggcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| ||||||||||||||
Sbjct: 33 ctgggattacaggtgtgagccac 11
Score = 46.1 bits (23), Expect = 6e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
|||| |||||||||| |||||||||||| ||||||| |||||
Sbjct: 4 gggcgcggtggctcacacctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;CABD01017919.1/5480-5762 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 165 bits (83), Expect = 1e-39
Identities = 208/250 (83%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||| || |||| |||||||||||| ||||||||||||||||||
Sbjct: 259 cccaggctggagtgcactggcgcaatctcggctcactgcaacctctgcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| ||||||||| |||||||||||| ||||| | ||||||| ||
Sbjct: 199 agcgattctcctgtctcagcctcctgagtagctgggatcacaggtgcatgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||| ||||| ||||||| |||||||| ||||||| ||||||||||||
Sbjct: 139 cagctaactttttgta-ttttagtagagacagggtttcaccatgttgcccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| ||||||||| |||||| ||| |||| ||| |||||||||| |||||| ||| ||||
Sbjct: 80 cgaactcctgagctcaggcaatctacccacctcagcctcccaaaatgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||||| ||||||||||||| || |||| ||||||||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcattttgggaggctgagg 51
>RF00017;Metazoa_SRP;CABD01334856.2/956-654 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 303
Score = 165 bits (83), Expect = 1e-39
Identities = 187/222 (84%), Gaps = 3/222 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
||||||||||| |||||||||| ||||| ||| ||| ||||||| ||||||| | ||
Sbjct: 229 gctcactgcaacctctgcctcccaggttccagcaattatcctgtctcagcctcctgaata 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
||||||||||| || | ||||||||| |||||||| ||||||||| |||||
Sbjct: 169 gctgggattac-ggtgcccgccaccacgcccagctaattttttgtatttttagtagagtt 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
||||||||||||||||||||||||||||||| |||||||||| ||||| |||| |||||
Sbjct: 110 ggggtttcatcatgttggccaggctggtctcgaactcctgacctcaggtgatctgcccgc 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
||||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 50 cttggcctcccaaagtgctgggattacaggcatgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 11 gtggctcatgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;ABGA01380438.1/1031-1312 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 163 bits (82), Expect = 4e-39
Identities = 172/202 (85%), Gaps = 3/202 (1%)
Strand = Plus / Minus
Query: 62 ctcctgggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcact 119
||||||||||||||| ||||||||||| ||||||| || ||||||||||||||| |
Sbjct: 211 ctcctgggttcaagccattctcctgtctcagcctcctgagaagctgggattacaggaatg 152
Query: 120 cgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttgg 179
| ||||||||| |||||| | ||||||| ||||||| || ||| ||||||||
Sbjct: 151 caccaccacactcagctaattatt-gcatttttagtagagacaggtttttgccatgttgg 93
Query: 180 ccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgc 239
||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||||||||
Sbjct: 92 ccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgc 33
Query: 240 tggaatttcaggtgtgagccac 261
||||||| ||||||||||||||
Sbjct: 32 tggaattacaggtgtgagccac 11
Score = 46.1 bits (23), Expect = 6e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 433 cagcctggacaacagagcaagactccgtctc 463
|||||||| ||||||||||||||||| ||||
Sbjct: 250 cagcctgggcaacagagcaagactccatctc 280
>RF00017;Metazoa_SRP;AC216066.3/52272-52554 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 163 bits (82), Expect = 4e-39
Identities = 190/226 (84%), Gaps = 3/226 (1%)
Strand = Plus / Minus
Query: 37 gatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctc 94
||||| |||||||||||| |||||||||||||||||||| ||||||||| ||||||||
Sbjct: 236 gatctcggctcactgcaacttctgcctcctgggttcaagcaattctcctgcctcagcctc 177
Query: 95 ccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttan 154
| ||||||||||||||| |||| | |||||| |||| ||| || | ||||
Sbjct: 176 ctgagtagctgggattactggcatccaccaccaagcccaactaattttt-gtctctttag 118
Query: 155 tagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatc 214
||||||| ||||||| ||||||||||||||||||| |||||||||||| ||||| ||||
Sbjct: 117 tagagacagggtttcgccatgttggccaggctggtcccaaactcctgacctcaggtgatc 58
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagcca 260
||||| |||||||||||||||||||||| ||| || | ||||||||
Sbjct: 57 cacccaccttggcctcccaaagtgctgggattacaagcgtgagcca 12
>RF00017;Metazoa_SRP;AC008950.4/17833-18114 9606:Homo sapiens
(human)
Length = 282
Score = 163 bits (82), Expect = 4e-39
Identities = 191/226 (84%), Gaps = 4/226 (1%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcc 95
|||| |||||||||||||||||||||||||| |||||| |||||||||| |||||||||
Sbjct: 234 atctcggctcactgcaaactctgcctcctggattcaagagattctcctgcctcagcctcc 175
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
|||||||||||||||||||| | | |||||| ||||||| ||||||| | |
Sbjct: 174 tgagtagctgggattacaggcatgcactaccacatccagctaattttt-gtatttt-agt 117
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
|||| |||| ||||| ||||||||||| |||||||| |||||||||| ||| | |||||
Sbjct: 116 agagtcgggctttcaccatgttggccaagctggtcttgaactcctgacctcaagtgatcc 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
||| |||| ||||||||||||||||| ||| ||||||||||||||
Sbjct: 56 acctgcctcagcctcccaaagtgctgggattacaggtgtgagccac 11
Score = 58.0 bits (29), Expect = 2e-07
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattacttg 414
||||||||| |||||||||||| ||||||| |||||||||||| | |||| |||||
Sbjct: 10 ggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacttg 66
>RF00017;Metazoa_SRP;AADD01030815.1/24608-24325 9606:Homo sapiens
(human)
Length = 284
Score = 163 bits (82), Expect = 4e-39
Identities = 218/265 (82%), Gaps = 2/265 (0%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
|||||||||||| ||| |||| |||| |||||| | |||| | |||||||||| || ||
Sbjct: 273 ttcactcttatttcccgggctggagtgcaatggcacaatctcgactcactgcaacctttg 214
Query: 61 cctcctgggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 213 cctcctgggttcaagccattctcctgtctcagtctccctagtagctgggattacaggcac 154
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
||||||| |||||||| ||||||||| || |||| | |||||| || |||
Sbjct: 153 ctgccaccatgcccagctaattttttgtatttttagtacagacagcgtttcactatattg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
||||||||||||| ||||| |||| ||||| |||||||| |||| |||||||||| ||
Sbjct: 93 gccaggctggtcttgaactcttgacctcaggtgatccacctgcctcagcctcccaaaatg 34
Query: 239 ctggaatttcaggtgtgagccactg 263
|||| ||| ||| |||||||||||
Sbjct: 33 ctgggattacagacgtgagccactg 9
Score = 46.1 bits (23), Expect = 6e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||| | ||||||||||| || |||| ||||||||||||
Sbjct: 11 gtggctcacgtctgtaatcccagcattttgggaggctgaggca 53
>RF00017;Metazoa_SRP;AADC01141441.1/107153-106870 9606:Homo sapiens
(human)
Length = 284
Score = 163 bits (82), Expect = 4e-39
Identities = 212/257 (82%), Gaps = 2/257 (0%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||| | ||||| |||||||||||| ||| ||||
Sbjct: 269 ctcttgttgcccaggctggagtacaatggcgtgatctcggctcactgcaacctccgcctt 210
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
| ||||||||||||||||||| ||||||||| |||||||||||||||||| | | |
Sbjct: 209 ataggttcaagcgattctcctgcctcagcctccttagtagctgggattacaggtgcccac 150
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||||| |||||||| ||||||||| || |||| ||||||| | ||||||||
Sbjct: 149 caccatgcccagctaattttttgtatttttagtacagacaaggtttcactacgttggcca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
||||||||| | |||||||| ||||||||||||||||||| |||||||||||| |||||
Sbjct: 89 ggctggtcttgagctcctgacctcaggcgatccacccgcctcggcctcccaaagagctgg 30
Query: 243 aatttcaggtgtgagcc 259
||| |||| |||||||
Sbjct: 29 gattacaggcgtgagcc 13
>RF00017;Metazoa_SRP;AADC01050253.1/3525-3807 9606:Homo sapiens
(human)
Length = 283
Score = 163 bits (82), Expect = 4e-39
Identities = 208/250 (83%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || |||| |||||| ||||||||||| || |||||||||||||||
Sbjct: 259 cccaggctggagtgcagtggtacgatctcagctcactgcaacctttgcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|||||||| |||| ||||| ||| ||| |||||||| ||||||||| |||||||||||
Sbjct: 199 agcgattcgcctgcctcagcttcctaagcagctgggactacaggcacctgccaccacacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| | |||| | |||| | |||||||||||||||||||
Sbjct: 139 cagcta-acttttgtatttttagtgtagacagagttttactatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||| | |||||||| |||| |||||||||||||||||| ||| || |
Sbjct: 80 cgaactcctgacctcaagtgatccacctgcctcggcctcccaaagtgctgggattacaag 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 61.9 bits (31), Expect = 1e-08
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattac 411
||||| ||||||||| || |||||||||| ||||||| ||||| |||||| | |||| ||
Sbjct: 4 gggcatggtggctcacgcttgtaatcccagcactttgggaggccgaggcaggtggatcac 63
Query: 412 ttgtggcaaggggctggagaccagcctggacaaca 446
||| || ||| | | ||||||||||||| |||||
Sbjct: 64 ttgaggtcaggagttcgagaccagcctggccaaca 98
>RF00017;Metazoa_SRP;AC118755.7/144088-144371 9606:Homo sapiens
(human)
Length = 284
Score = 163 bits (82), Expect = 4e-39
Identities = 186/221 (84%), Gaps = 4/221 (1%)
Strand = Plus / Minus
Query: 43 ggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagt 100
|||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 229 ggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcctgagt 170
Query: 101 agctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagaga 160
|||| ||| |||||| |||||||||||| |||| |||||||| ||||||
Sbjct: 169 agctaggactacaggtgtgtgccaccacacccggctaattttt--tatttttagtagaga 112
Query: 161 cggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccg 220
||| |||||| ||||||||||||||||||||| ||||||||| ||||| ||||| || |
Sbjct: 111 cggcgtttcaccatgttggccaggctggtctcgaactcctgatctcaggtgatcctcctg 52
Query: 221 ccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
||| ||||||||||||||||| ||| |||| |||||||||
Sbjct: 51 cctcagcctcccaaagtgctgggattacaggcgtgagccac 11
Score = 69.9 bits (35), Expect = 4e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggat 408
||||||||| ||||||||||||| ||||||| |||||||||||| ||||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggaggat 60
>RF00017;Metazoa_SRP;AACC02000046.1/139313-139595 9606:Homo sapiens
(human)
Length = 283
Score = 163 bits (82), Expect = 4e-39
Identities = 190/226 (84%), Gaps = 3/226 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
|||||| |||| ||| |||||| |||| |||| ||||||||||| |||||||| ||||
Sbjct: 229 gctcacggcaacctccgcctcccaggtttaagccattctcctgtctcagcctcccgagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
||||||| |||||||| | ||||||| ||| |||| | ||||| | |||||||
Sbjct: 169 gctgggactacaggcatccaccaccacgcccggctaattttt-gcattttgagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||| |
Sbjct: 110 agggtttcaccatgttggccaagctggtctcaaactcctgacttcaggtgatccacccac 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcc 267
||||||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 50 cttggcctcccaaagtgctgggattacaggcatgagccactgtgcc 5
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
|||||| |||||||| ||||||||||||| ||||||| |||||
Sbjct: 4 gggcacagtggctcatgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AADB02020052.1/102288-101985 9606:Homo sapiens
(human)
Length = 304
Score = 163 bits (82), Expect = 4e-39
Identities = 179/210 (85%), Gaps = 4/210 (1%)
Strand = Plus / Minus
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
||||||||||||||| |||||| | ||||||||| |||||||||||| |||| | |
Sbjct: 213 cctcctgggttcaagtcattctctggcctcagcctcctgagtagctgggataacagacgc 154
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
||||||||||||| |||| ||||||||| |||||||||||||||| |||||||
Sbjct: 153 ccgccaccacacccggctaattttt-gtatttttagtagagacggggtttcaccatgttg 95
Query: 179 gccaggctggtctc-aaactcctgacgtcaggcgatccacccgccttggcctcccaaagt 237
|||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 94 gccaggctggtctcaaaactcctgacctcaggtgatccacccgcctcagcctcccaaagt 35
Query: 238 gctggaatttcaggtgtgagccactgtgcc 267
||||| ||| |||| ||||||||| |||||
Sbjct: 34 gctgggattacaggcgtgagccaccgtgcc 5
Score = 73.8 bits (37), Expect = 3e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||||||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 4 gggcacggtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AANU01117906.1/5885-6165 9544:Macaca mulatta
(rhesus monkey)
Length = 281
Score = 163 bits (82), Expect = 4e-39
Identities = 208/250 (83%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||||| ||||| ||||||||||| |||| |||||||||| |
Sbjct: 259 cccaggctggagtgcagtggtgagatctcagctcactgcaatttctgtctcctgggttta 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| ||||||||| ||||||||||||||| ||||| ||||||| ||
Sbjct: 199 agcaattctcctgcctcagcctcctaagtagctgggattataggcatctgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| | ||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 139 cagctatttttt-gcatttttagtagagacggggtttcagcatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| |||| | | ||| |||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatctgctcacctcggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
||||||||
Sbjct: 20 catgagccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||| |||||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 4 gggcgcggtggctcatgcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;AANU01245857.1/17054-16772 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 163 bits (82), Expect = 4e-39
Identities = 219/264 (82%), Gaps = 5/264 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||| || |||| ||||||||||| |||||
Sbjct: 272 ttcactcttgttgcccaggctggagtgcaatggcgcaatctcagctcactgcaacctctg 213
Query: 61 cctcctgggtt-caagcgattctcctg--tcagcctcccaagtagctgggattacaggca 117
|||| |||||| ||||| ||||||||| ||||||||| ||||| ||||||||||||||
Sbjct: 212 cctcttgggtttcaagcaattctcctgcctcagcctcctgagtagttgggattacaggca 153
Query: 118 ctcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgtt 177
| |||||| ||| |||| |||||| | |||||| |||||||||||||||
Sbjct: 152 tgcaccaccatgcccggctaattttttgtattt--agcagagacagggtttcatcatgtt 95
Query: 178 ggccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagt 237
|| ||||||||||||| ||||||||| ||||| ||||||||| ||| ||||||||||||
Sbjct: 94 ggtcaggctggtctcatactcctgacctcaggtgatccacccacctcagcctcccaaagt 35
Query: 238 gctggaatttcaggtgtgagccac 261
||||| ||| |||| |||||||||
Sbjct: 34 gctgggattacaggagtgagccac 11
Score = 52.0 bits (26), Expect = 1e-05
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||||| |||||||||||| ||||||| ||||||||||
Sbjct: 10 ggtggctcactcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AC148707.1/58283-58573 9544:Macaca mulatta
(rhesus monkey)
Length = 291
Score = 163 bits (82), Expect = 4e-39
Identities = 187/222 (84%), Gaps = 3/222 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagta 101
|||||||||| |||||||||| |||||| | |||||||||| ||||||||||| |||
Sbjct: 229 gctcactgcagcctctgcctcccgggttccaatgattctcctgcctcagcctcccaggta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
||||||||||||||||| | |||||| || |||| ||||||||| ||| |||
Sbjct: 169 gctgggattacaggcacacaccaccattccaggctaatcttt-gtatttttagtagggac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
||||||||| ||||||||||||| |||||| |||||||||| ||||| ||||| |||||
Sbjct: 110 ggggtttcaccatgttggccagggtggtcttgaactcctgacctcaggtgatcctcccgc 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
|||||||||||||| |||| | ||| ||||||||||||||||
Sbjct: 50 cttggcctcccaaaatgctaggattacaggtgtgagccactg 9
>RF00017;Metazoa_SRP;ABGA01283676.1/8000-7718 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 161 bits (81), Expect = 1e-38
Identities = 210/253 (83%), Gaps = 3/253 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| | || |||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 260 acccaggctggggtgcaatggcgcgatcttggctcactgcaacctccgcctcctgggttc 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
|| |||||||||| ||||||||| |||||||||| |||||||||| |||||| |
Sbjct: 200 cagtgattctcctgcctcagcctcctgagtagctggggttacaggcacctaccaccatgc 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
| ||| ||||||||| |||||||||||||||| ||| |||||||||||||||
Sbjct: 140 ctgactaattttt-gtatttttagtagagacggggtttcaccatattggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
| || ||||||| ||||| |||||||||| || ||||||| |||||||||| ||| |||
Sbjct: 81 tggaattcctgacctcaggtgatccacccgtctcggcctccaaaagtgctgggattacag 22
Query: 251 gtgtgagccactg 263
| ||||||||||
Sbjct: 21 gcatgagccactg 9
>RF00017;Metazoa_SRP;ABGA01090368.1/220-498 9601:Pongo abelii
(Sumatran orangutan)
Length = 279
Score = 161 bits (81), Expect = 1e-38
Identities = 105/113 (92%)
Strand = Plus / Minus
Query: 155 tagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatc 214
|||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 279 tagagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggcgatc 220
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcc 267
| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 219 cgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccactgtgcc 167
Score = 56.0 bits (28), Expect = 6e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 353 ggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 167 ggcacagtggctcacacctgtaatcccagcactttgggaggctgaggc 214
>RF00017;Metazoa_SRP;ABGA01207861.1/159-440 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 161 bits (81), Expect = 1e-38
Identities = 216/261 (82%), Gaps = 4/261 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
|||||||| |||||||| |||| |||| |||| |||| |||||||||||| || ||
Sbjct: 267 ctcttattgcccaggctggagtgcaatagtgctatctcggctcactgcaaccttcaccca 208
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
||||||| ||| |||||||| | |||||||||| |||||||||||||||||||| | |
Sbjct: 207 ctgggtttaagtgattctccggcctcagcctcccgagtagctgggattacaggcatgcac 148
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|||||| |||||||| ||||||||| |||||| | ||||| |||||||| |
Sbjct: 147 caccacgcccagctaatttt--gtatttttagcagagacagagtttctccatgttggtta 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
| |||||||| |||||| ||| ||||| ||||||||| ||||||||||||||||||||||
Sbjct: 89 gcctggtctcgaactcccgacctcaggtgatccacccaccttggcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccactg 263
||| ||||||||||||||||
Sbjct: 29 gattacaggtgtgagccactg 9
>RF00017;Metazoa_SRP;ABGA01012901.1/9667-9949 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 161 bits (81), Expect = 1e-38
Identities = 216/261 (82%), Gaps = 3/261 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| ||||||| ||||||| |||||||||| ||| |||||
Sbjct: 268 ctcttgttgcccaggctggagtgcaatggtatgatcttgactcactgcaacctccgcctc 209
Query: 65 ctgggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgc 122
|||||||||||| |||||||| | | |||| | |||| ||||||||||||||| |||
Sbjct: 208 ctgggttcaagcccttctcctgccttaccctctcgagtacctgggattacaggcatccgc 149
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|||||||||| |||| ||||||||| |||||||| |||||| |||||||| ||
Sbjct: 148 caccacacccggctaattttt-gtatttttagtagagacgcggtttctccatgttggtca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
|||||||||| |||||| ||| || || |||| ||||||| ||||||||||||||||||
Sbjct: 89 ggctggtctcgaactcccgacctcgggtgatctgcccgcctcggcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccactg 263
||| |||| ||||||||||
Sbjct: 29 gattacaggcatgagccactg 9
Score = 52.0 bits (26), Expect = 1e-05
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||||| ||||||||||||| ||||||| ||||| |||||
Sbjct: 11 gtggctcatgcctgtaatcccagcactttgggaggccgaggc 52
>RF00017;Metazoa_SRP;AADA01187409.1/9085-8803 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 161 bits (81), Expect = 1e-38
Identities = 213/257 (82%), Gaps = 3/257 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || |||||| |||| || ||||||||| | | ||||||||||||
Sbjct: 260 acccaggctggagtgcagtggtgcaatctcggttcactgcaacccccacctcctgggttc 201
Query: 73 aagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacac 130
|||| ||||||||| ||||||||| ||||||||||||||||||| ||||| |||||
Sbjct: 200 aagcaattctcctgcctcagcctcctgagtagctgggattacaggcgtgcgccagcacac 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
||||||| ||||||||| || |||| | |||||| || |||||||||||||||
Sbjct: 140 ccagctaattttt-gtatttttagtaaagacagagtttcaccacattggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
| |||||| ||| ||| | ||||||||||||| ||||||||||||||||| ||| |||
Sbjct: 81 ccgaactcccgacctcaagtgatccacccgcctcagcctcccaaagtgctgggattacag 22
Query: 251 gtgtgagccactgtgcc 267
| |||||||||||||||
Sbjct: 21 gcgtgagccactgtgcc 5
Score = 65.9 bits (33), Expect = 7e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||| |||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 4 gggcacagtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;DQ023266.1/31780-32079 9598:Pan troglodytes
(chimpanzee)
Length = 300
Score = 161 bits (81), Expect = 1e-38
Identities = 209/252 (82%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||| | ||||| |||||||||| ||||||||| |||| |
Sbjct: 259 cccaggctggagtgcaatggcgtgatctctactcactgcaacgtctgcctcccaggttta 200
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||||| ||||||| |||||| ||||||||||||| | ||||||| ||
Sbjct: 199 agcaattctcctgtctcagcctcctaagtagatgggattacaggcgcatgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| |||||||| ||||||| |||||||| ||||||||||||||||||||
Sbjct: 139 cagctaattttta-tatttttagtagagacagggtttcaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| |||||| || || |||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatccagccaactcggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
|||||||||||
Sbjct: 20 cgtgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AADA01277245.1/13528-13229 9598:Pan troglodytes
(chimpanzee)
Length = 300
Score = 161 bits (81), Expect = 1e-38
Identities = 209/252 (82%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||| | ||||| |||||||||| ||||||||| |||| |
Sbjct: 259 cccaggctggagtgcaatggcgtgatctctactcactgcaacgtctgcctcccaggttta 200
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||||| ||||||| |||||| ||||||||||||| | ||||||| ||
Sbjct: 199 agcaattctcctgtctcagcctcctaagtagatgggattacaggcgcatgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| |||||||| ||||||| |||||||| ||||||||||||||||||||
Sbjct: 139 cagctaattttta-tatttttagtagagacagggtttcaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| |||||| || || |||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatccagccaactcggcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
|||||||||||
Sbjct: 20 cgtgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AACZ02117017.1/1641-1361 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 161 bits (81), Expect = 1e-38
Identities = 203/241 (84%), Gaps = 5/241 (2%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| || | || ||| ||||||| ||||||||||||| |||||||||||| ||||
Sbjct: 259 cccaggctggaatgcagtggcgcgatctcggctcactgcaaattctgcctcctggattca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattaca-ggcactcgccaccacac 130
||||||||||||| |||||||| |||||||||||||||||| ||||| |||||||| |
Sbjct: 199 agcgattctcctgcctcagcctctcaagtagctgggattacagggcacctgccaccacgc 140
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
|| |||| ||| ||||| |||||||||||||||| |||| ||||||| ||||||
Sbjct: 139 ccggcta-atttttgta-ttttagtagagacggggtttcaccatgctggccagactggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
| |||||||||| ||||| ||||| ||||||| ||||||| ||| |||||| ||| |||
Sbjct: 81 ttgaactcctgacctcaggtgatccgcccgcctcggcctccgaaattgctgggattacag 22
Query: 251 g 251
|
Sbjct: 21 g 21
>RF00017;Metazoa_SRP;AACZ02154509.1/5623-5904 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 161 bits (81), Expect = 1e-38
Identities = 226/273 (82%), Gaps = 4/273 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||| || |||| |||||||||||| |||
Sbjct: 271 ttcactcttgttgcccaggctggagtgcaatggcgcaatctcggctcactgcaacctcca 212
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||||||||| ||| ||||| | |||||||||||||||||||
Sbjct: 211 cctcctgggttcaagctattctcctgcctcaccctcctgaatagctgggattacaggcac 152
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
| ||||| |||||||| ||||||| | ||||||| ||||||| ||||||
Sbjct: 151 ccatcaccatgcccagctaattttt-gtatttt-agtagagacaaggtttcactatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| ||
Sbjct: 93 gccagtctggtctcaaactcctgacctcaggcgatccacccatctcaacctcccaaattg 34
Query: 239 ctggaatttcaggtgtgagccactgtgcctggc 271
|||| ||| |||| ||||||||||| |||||||
Sbjct: 33 ctgggattacaggcgtgagccactgcgcctggc 1
>RF00017;Metazoa_SRP;ABSL01047383.1/44691-44412 9606:Homo sapiens
(human)
Length = 280
Score = 161 bits (81), Expect = 1e-38
Identities = 198/237 (83%), Gaps = 5/237 (2%)
Strand = Plus / Minus
Query: 33 gtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--ag 90
|||| |||| |||||||||||| ||| |||||| ||||||||| ||||||||||| ||
Sbjct: 238 gtgcaatctcggctcactgcaacctccacctcctaggttcaagcaattctcctgtctcag 179
Query: 91 cctcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtattt 150
|||||| |||||||||||||||||||| ||||||||| ||| |||| ||||||
Sbjct: 178 cctccccagtagctgggattacaggcatgcgccaccacgcccggctatttt---gtattt 122
Query: 151 ttantagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggc 210
||| | |||||| |||||| ||| |||| |||||||||||| |||||||||| |||||
Sbjct: 121 ttagtggagacgcagtttcaccatattggtcaggctggtctcgaactcctgacctcaggt 62
Query: 211 gatccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcc 267
||||||| ||| |||||||||||||||||| ||| |||| |||||||| ||||||
Sbjct: 61 aatccacctacctcggcctcccaaagtgctgggattacaggcgtgagccagtgtgcc 5
Score = 48.1 bits (24), Expect = 2e-04
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 360 tggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 12 tggctcacgcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;AL590282.6/19296-18996 9606:Homo sapiens
(human)
Length = 301
Score = 161 bits (81), Expect = 1e-38
Identities = 207/250 (82%), Gaps = 5/250 (2%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||| | ||||| |||||||||||| |||||||||||||||||
Sbjct: 257 cccaggctggagtgcaatggcgtgatctcggctcactgcaacctctgcctcctgggttct 198
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| ||||||||| ||||||| ||||||||||||| |||| ||
Sbjct: 197 agcgattctcctgtctcagcctcctgagtagctaggattacaggcac---acaccgtgcc 141
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|| ||| ||| ||||| | |||||||||||||| |||||||| ||| |||||||
Sbjct: 140 caactaaatttttgtacttttagtggagacggggtttcaccatgttggtcagactggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| |||||||| | || ||||||||||||||||| ||| ||||
Sbjct: 80 ccaactcctgacctcaggtgatccacctgtctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgag 398
|||||||| ||||||||||||| ||||||| |||||||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggctgag 50
>RF00017;Metazoa_SRP;ABBA01010070.1/108367-108085 9606:Homo sapiens
(human)
Length = 283
Score = 161 bits (81), Expect = 1e-38
Identities = 209/252 (82%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || |||||| |||| ||||||| |||| |||||||| |||||||||
Sbjct: 259 cccaggctggagtgcagtggtgcaatctcggctcaccgcaagctctgccttctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
| || |||||| |||||||||| ||||||||||| ||||||| | ||||||||||||
Sbjct: 199 caccatcctcctgcatcagcctcccgagtagctgggactacaggcccgcgccaccacacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| |||||||| ||||||| || ||||| ||||||| ||||||| ||||
Sbjct: 139 cagctaatttttt-tatttttagtagagacaggatttcaccatgttgaccaggcttgtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||| ||||||||| ||||||||| ||| |||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcaaatgatccacccaccttggcctaccacagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
|||||||||||
Sbjct: 20 cgtgagccactg 9
>RF00017;Metazoa_SRP;AL646005.7/2161-1881 9606:Homo sapiens (human)
Length = 281
Score = 161 bits (81), Expect = 1e-38
Identities = 207/249 (83%), Gaps = 3/249 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| ||| || |||||| ||| |||||||||||| ||||||||
Sbjct: 268 ctcttgttgcccaggctgtagtgcagtggtgcagtctcggctcactgcaacttctgcctc 209
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
||||||| |||||||||||||| ||||||||| ||||||| ||||||||||||| | |
Sbjct: 208 ctgggtttaagcgattctcctgactcagcctccttagtagcttggattacaggcacccac 149
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|||||| ||| |||| ||||||||| ||||||| | ||||| |||||||||||
Sbjct: 148 caccacgcccggctaagtttt-gtatttttagtagagacagtgtttcgccatgttggcca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
||||||||| |||||||||| ||| | ||||||||| ||| ||||||||||||||||||
Sbjct: 89 ggctggtcttgaactcctgacctcaagtgatccacccacctgggcctcccaaagtgctgg 30
Query: 243 aatttcagg 251
||| ||||
Sbjct: 29 gattacagg 21
>RF00017;Metazoa_SRP;AADD01142743.1/2651-2932 9606:Homo sapiens
(human)
Length = 282
Score = 161 bits (81), Expect = 1e-38
Identities = 226/273 (82%), Gaps = 4/273 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||| || |||| |||||||||||| |||
Sbjct: 271 ttcactcttgttgcccaggctggagtgcaatggcgcaatctcggctcactgcaacctcca 212
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||||||||| ||| ||||| | ||||||||||||| |||||
Sbjct: 211 cctcctgggttcaagctattctcctgcctcaccctcctgaatagctgggattacgggcac 152
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
| ||||| |||||||| ||||||| | |||||||| ||||||| ||||||
Sbjct: 151 ccatcaccatgcccagctaattttt-gtatttt-agtagagacgaggtttcactatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| ||
Sbjct: 93 gccagtctggtctcaaactcctgacctcaggcgatccacccatctcaacctcccaaattg 34
Query: 239 ctggaatttcaggtgtgagccactgtgcctggc 271
|||| ||| |||| ||||||||||| |||||||
Sbjct: 33 ctgggattacaggcgtgagccactgcgcctggc 1
>RF00017;Metazoa_SRP;CABD01167072.1/313-608 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 296
Score = 161 bits (81), Expect = 1e-38
Identities = 178/208 (85%), Gaps = 6/208 (2%)
Strand = Plus / Minus
Query: 56 ctctgcctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattaca 113
||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 214 ctctgcctcctggattcaagcgattctcctgcctcagcctcccaagtagttgggattaca 155
Query: 114 ggcactcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatca 173
| ||| | |||||| |||||||| ||||||||| ||||||| |||||||| ||
Sbjct: 154 gccacac--caccacgcccagctaattttt-gtatttttagtagagacagggtttcacca 98
Query: 174 tgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctccca 233
|||||||||||||||||| |||||||||| ||||| ||||||| ||||||| ||||||
Sbjct: 97 tgttggccaggctggtctggaactcctgacctcaggtaatccacctgccttgg-ctccca 39
Query: 234 aagtgctggaatttcaggtgtgagccac 261
||||||||| ||| ||| |||||||||
Sbjct: 38 aagtgctgggattataggcgtgagccac 11
>RF00017;Metazoa_SRP;CABD01021803.1/1465-1747 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 161 bits (81), Expect = 1e-38
Identities = 186/221 (84%), Gaps = 3/221 (1%)
Strand = Plus / Minus
Query: 43 ggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagt 100
|||||||||||| |||||||||||||||||| | ||||||||| ||||||| || |||
Sbjct: 230 ggctcactgcaacctctgcctcctgggttcaggtgattctcctccctcagccttccgagt 171
Query: 101 agctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagaga 160
|||||||| |||||||| | |||||| ||||||||| ||||||||| ||||||
Sbjct: 170 agctgggactacaggcatgcaccaccatacccagctaattttt-gtatttttagtagaga 112
Query: 161 cggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccg 220
|||||||||| |||||||||||||||||||| |||||||||| ||| || |||| |||
Sbjct: 111 cggggtttcactatgttggccaggctggtctcgaactcctgacctcaagccatcctccca 52
Query: 221 ccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| ||||||||||||||||| ||| |||| |||||||||
Sbjct: 51 tctcagcctcccaaagtgctgggattacaggcgtgagccac 11
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgag 398
||||||||| ||||||||||||| ||||||| |||||||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggctgag 50
>RF00017;Metazoa_SRP;CABD01157239.1/4943-5223 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 281
Score = 161 bits (81), Expect = 1e-38
Identities = 215/257 (83%), Gaps = 5/257 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| ||| || ||||| |||||||||||||||||| |||||||||| ||||||
Sbjct: 258 acccaggctgaagtgcagtggtgtgatcttggctcactgcaacctctgcctcccgggttc 199
Query: 73 aagcgattctcc--tgtcagcctcccaagtagctgggattacaggcactcgccaccacac 130
||| |||||||| ||||| ||||| ||||||||||| ||||||| | | |||||| |
Sbjct: 198 aagtgattctccagtgtcatcctcctgagtagctgggactacaggcccacaccaccatgc 139
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||
Sbjct: 138 ccagctaattttt-gtatttttagtagagatggggtttcaccatgttggccaggctggtc 80
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
| |||||||||| ||| |||||||| |||| ||||| |||||||||||| ||| |||
Sbjct: 79 t-gaactcctgacctcaaatgatccaccagcctcggcct-ccaaagtgctgggattacag 22
Query: 251 gtgtgagccactgtgcc 267
| ||||||||| |||||
Sbjct: 21 gcgtgagccaccgtgcc 5
Score = 58.0 bits (29), Expect = 2e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttg 388
||||||||||||||| ||||||||||||| |||||||
Sbjct: 4 gggcacggtggctcacgcctgtaatcccagcactttg 40
>RF00017;Metazoa_SRP;ABGA01284229.1/7715-7434 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 159 bits (80), Expect = 6e-38
Identities = 207/248 (83%), Gaps = 4/248 (1%)
Strand = Plus / Minus
Query: 16 caggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaag 75
|||||| |||| |||||| || |||||||||||| |||| ||||||||||||||||||||
Sbjct: 256 caggctggagtgcaatggcgccatcttggctcacagcaacctctgcctcctgggttcaag 197
Query: 76 cgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacaccca 133
||||||||||| ||||||||| || ||||||||||||||| | | ||||||| ||||
Sbjct: 196 cgattctcctgtctcagcctcctgagaagctgggattacaggtgcccaccaccacgccca 137
Query: 134 gctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtctca 193
| || ||||||| | |||||||||||||||| |||||| |||| |||||| |
Sbjct: 136 gata-atttttgtattttcagtagagacggggtttcaccatgttagcca-gctggttttg 79
Query: 194 aactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtg 253
|||||||||| ||| | |||||||| |||| ||||||||||||||||| ||| |||| |
Sbjct: 78 aactcctgacctcaagtgatccacctgcctcagcctcccaaagtgctgggattacaggcg 19
Query: 254 tgagccac 261
||||||||
Sbjct: 18 tgagccac 11
Score = 63.9 bits (32), Expect = 3e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattacttg 414
|||||||| ||||||||||||| ||||||| |||||||||||| | |||| |||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttg 66
>RF00017;Metazoa_SRP;AADA01114716.1/5515-5233 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 159 bits (80), Expect = 6e-38
Identities = 185/220 (84%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
||||||||||| |||||||||||| |||||||| ||||||||| | ||||||| ||||
Sbjct: 229 gctcactgcaacctctgcctcctgagttcaagcaattctcctgccgcagcctccttagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
||||||||||||||| | ||||||| || |||| ||||||||| |||||||
Sbjct: 169 gctgggattacaggcgtgcaccaccacgcctggctaattttt-gtatttttagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||| |
Sbjct: 110 agggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccac 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| ||||||||||||||||| ||| |||| | |||||||
Sbjct: 50 ctcagcctcccaaagtgctgggattacaggagagagccac 11
Score = 46.1 bits (23), Expect = 6e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 369 cctgtaatcccaacactttgagaggctgagg 399
|||||||||||| ||||||| ||||||||||
Sbjct: 21 cctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AACZ02147624.1/7338-7639 9598:Pan troglodytes
(chimpanzee)
Length = 302
Score = 159 bits (80), Expect = 6e-38
Identities = 201/243 (82%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 31 tggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc-- 88
|||| |||||| |||||||||||| ||| |||||| ||||| ||| |||||||||||
Sbjct: 243 tggtacgatctcggctcactgcaacctccacctcctcggttccagccattctcctgtctc 184
Query: 89 agcctcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtat 148
||||||| |||||||||||||||||||| ||||| | | ||| ||||
Sbjct: 183 agcctcctgagtagctgggattacaggcatgtaccaccgtaactgactaattttttgtat 124
Query: 149 ttttantagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcag 208
|||| |||||||||||||||| ||||||||||||||||||||| |||||||||| ||||
Sbjct: 123 ctttagtagagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcag 64
Query: 209 gcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcct 268
| ||||||||| |||||||||||||||||||||| ||| ||| |||| ||||| | ||||
Sbjct: 63 gtgatccacccaccttggcctcccaaagtgctgggattacagctgtgcgccaccgcgcct 4
Query: 269 ggc 271
|||
Sbjct: 3 ggc 1
>RF00017;Metazoa_SRP;AACZ02216483.1/5974-6256 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 159 bits (80), Expect = 6e-38
Identities = 209/252 (82%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| || | || ||| ||||||| |||||||||||| |||||||||| ||||||
Sbjct: 259 cccaggctggaatgcagtggcgcgatctcggctcactgcaacctctgcctcccaggttca 200
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||||| |||||||| || |||| ||| ||||||||| ||||||| ||
Sbjct: 199 agcaattctcctgtctcagcctcccgaggagctaggactacaggcacctgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||| ||||||||| ||||||| |||||||| ||| |||| ||||| |||||
Sbjct: 139 tggctaattttt-gtatttttagtagagacagggtttcaccatattggtcaggccggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||| ||||||||||||||| ||| ||||||||||||||||| ||| ||||
Sbjct: 80 tgaactcctgacctcaggcgatccacccacctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
||||||||||||
Sbjct: 20 tgtgagccactg 9
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| |||||||||||| ||||||| ||||||||||
Sbjct: 11 gtggctcacacctgtaatcccagcactttgggaggctgagg 51
Score = 48.1 bits (24), Expect = 2e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 432 ccagcctggacaacagagcaagactccgtctc 463
||||||||| ||||||||||||||||| ||||
Sbjct: 250 ccagcctgggcaacagagcaagactccatctc 281
>RF00017;Metazoa_SRP;AADA01313803.1/16287-15985 9598:Pan troglodytes
(chimpanzee)
Length = 303
Score = 159 bits (80), Expect = 6e-38
Identities = 176/208 (84%), Gaps = 3/208 (1%)
Strand = Plus / Minus
Query: 56 ctctgcctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattaca 113
||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 217 ctctgcctcctgggttcaagccattctcctgcctcagcctcccaagtagctggaattaca 158
Query: 114 ggcactcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatca 173
|| |||||||| ||||||||| ||||||||| ||||||||| |||||| ||
Sbjct: 157 ggtgtgcgccaccatacccagctaattttt-gtatttttagtagagacggagtttcacca 99
Query: 174 tgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctccca 233
| |||| ||||||||||| |||||| || ||||| ||||||||| |||||||||||||
Sbjct: 98 tattggtcaggctggtcttgaactcccaacctcaggtgatccacccaccttggcctccca 39
Query: 234 aagtgctggaatttcaggtgtgagccac 261
||||||||| ||| |||| || ||||||
Sbjct: 38 aagtgctgggattacaggcgtaagccac 11
>RF00017;Metazoa_SRP;CABD01261749.1/635-919 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 285
Score = 159 bits (80), Expect = 6e-38
Identities = 209/251 (83%), Gaps = 5/251 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || ||| |||| |||| ||||||||| ||||||||||||||||| ||| |||||
Sbjct: 270 ctcttgttgcccgggctggagtgcaatggtgccatcttggctcactgcaacctccgcctc 211
Query: 65 ctgggttcaagcgattctcctg--tcagcctccc--aagtagctgggattacaggcactc 120
| | |||||||| ||||||||| ||||||||| |||||||||||||| |||| ||
Sbjct: 210 ccgagttcaagctattctcctgcctcagcctcctgaaagtagctgggattgtaggcgttc 151
Query: 121 gccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggc 180
|||||||| |||||||| ||||||||| || |||||||||||||||||| ||||
Sbjct: 150 gccaccacgcccagctaactttt-gtatttttagtacagacggggtttcatcatggtggc 92
Query: 181 caggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgct 240
||||||||||| |||||||||| ||||| ||||| ||| || ||||||||||||| ||
Sbjct: 91 caggctggtcttgaactcctgacctcaggtgatccgcccaccccggcctcccaaagtact 32
Query: 241 ggaatttcagg 251
|| ||| ||||
Sbjct: 31 gggattacagg 21
>RF00017;Metazoa_SRP;CABD01032836.1/10594-10876 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 159 bits (80), Expect = 6e-38
Identities = 191/228 (83%), Gaps = 3/228 (1%)
Strand = Plus / Minus
Query: 36 cgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcct 93
|||||| ||||||| |||| |||||||||||||||| ||| |||||||||||| ||||
Sbjct: 237 cgatctcggctcacagcaacctctgcctcctgggtttaagtgattctcctgtcccagccc 178
Query: 94 cccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtattttta 153
|| ||||||| ||||||||||| || |||||||| || |||| |||||||||
Sbjct: 177 cctgagtagctaggattacaggcgcttgccaccacgcctggctaattgtt-gtattttta 119
Query: 154 ntagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgat 213
||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 118 gtagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggcgat 59
Query: 214 ccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
| || ||| |||||||||||||||||| ||| || | |||||||||
Sbjct: 58 ctccctacctcggcctcccaaagtgctgggattacaagggtgagccac 11
>RF00017;Metazoa_SRP;AANU01226031.1/15990-15710 9544:Macaca mulatta
(rhesus monkey)
Length = 281
Score = 159 bits (80), Expect = 6e-38
Identities = 209/252 (82%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||||| ||| |||||| ||||||||||| |||||||||||||||| |
Sbjct: 259 cccaggctgcagtccagtggcacgatctcagctcactgcaacctctgcctcctgggttta 200
Query: 74 agcgattctcct--gtcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|||||||||||| |||||||||| ||||||||||||||||||| | |||||||| ||
Sbjct: 199 agcgattctcctacctcagcctccctagtagctgggattacaggcgcccgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| ||| ||||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 139 cggcta-atttttgtacttttagtggagacgggatttcaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||| ||| || ||| ||| |||| ||||||||||| ||||| ||| ||||
Sbjct: 80 tgaactcctgacctcaagcaatctacctgcctcagcctcccaaagagctgggattacagg 21
Query: 252 tgtgagccactg 263
|||||||||||
Sbjct: 20 cgtgagccactg 9
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||| ||||||||||||| | ||||| ||||||||||||
Sbjct: 11 gtggctcacgcctgtaatcccagctctttgggaggctgaggca 53
>RF00017;Metazoa_SRP;ABGA01257745.1/5009-4729 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 157 bits (79), Expect = 2e-37
Identities = 208/252 (82%), Gaps = 5/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || |||||| ||||||||||||||| | |||||||||||||||
Sbjct: 257 cccaggctggagtgcagtggtgcaatcttggctcactgccacttctgcctcctgggtttt 198
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|||||||||| ||||||||| ||||||||||| ||||||| | | ||||| ||
Sbjct: 197 ---gattctcctgcctcagcctcctgagtagctgggactacaggcgcccaacaccatgcc 141
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| ||||||||| |||||||| |||||| ||||||||||||| ||||||
Sbjct: 140 ctgctaattttttgtatttttagcagagacggagtttcaccatgttggccaggttggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||||| ||||||||||||||| ||| ||||| |||||||||||| ||| ||||
Sbjct: 80 caaactcctgacctcaggcgatccacccacctcggcctaccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
||||||||||
Sbjct: 20 catgagccactg 9
>RF00017;Metazoa_SRP;AACZ02155418.1/32750-32469 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 157 bits (79), Expect = 2e-37
Identities = 214/259 (82%), Gaps = 4/259 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| ||| || || |||||||||||| |||| |||||||||
Sbjct: 267 ctcttgttgcccaggctggagtgcaacggcgcaatcttggctcacggcaacctctgcctc 208
Query: 65 ctgggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgc 122
| |||||||||| ||||||||||| |||||||| |||||||||||||| ||||| | |
Sbjct: 207 cagggttcaagccattctcctgtctcagcctcccgagtagctgggattataggcatgcac 148
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||| | || |||| |||| |||| |||||| |||||||| ||||||| ||
Sbjct: 147 cactatggccggctaacttt--gtatctttagtagagatggggtttctccatgttgatca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 89 ggctggtcttgaactcctgacctcaggcgatccacccgcctcagcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccac 261
||| |||| |||||||||
Sbjct: 29 gattacaggcgtgagccac 11
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AC195521.2/80928-80646 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 157 bits (79), Expect = 2e-37
Identities = 207/250 (82%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||| ||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 259 cccaggctggagtgcaataatgcaatcttggctcattgcaacctctgcctcctgggttcc 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| |||||||||||||||||||||||||| || | ||||| ||| ||
Sbjct: 199 agcgattctcctgcctcagcctcccaagtagctgggattaccggtgcccgccaacacgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| |||| |||||| ||||||| || ||||| ||||||||| |||||| |||
Sbjct: 139 cggctaatttttgtattttttagtagagacaggctttcaccatgttggctaggctgatct 80
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| |||||||| || | |||||||| ||||||||| ||| ||||
Sbjct: 79 cgaactcctgacctcaggtgatccacctgcttcggcctccc-aagtgctgggattacagg 21
Query: 252 tgtgagccac 261
|||||||||
Sbjct: 20 cgtgagccac 11
Score = 46.1 bits (23), Expect = 6e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactt 386
||||| ||||||||| ||||||||||||| |||||
Sbjct: 4 gggcatggtggctcacgcctgtaatcccagcactt 38
>RF00017;Metazoa_SRP;AADD01003764.1/16300-16019 9606:Homo sapiens
(human)
Length = 282
Score = 157 bits (79), Expect = 2e-37
Identities = 217/263 (82%), Gaps = 4/263 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| || |||||||||||||| ||||||| |||| |||||
Sbjct: 271 ttcactcttgttgcccaggctggaacgcaatggtgcgatctgggctcacagcaacctctg 212
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||||||||| |||||||| |||||||||||||||||||
Sbjct: 211 cctcctgggttcaagcaattctcctgcctcagcctctggggtagctgggattacaggcat 152
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
| | ||||| ||| |||| ||||||||| ||||||| ||||||| | |||||
Sbjct: 151 gcactaccacgcccggcta--attttgtatttttagtagagacagggtttctccgtgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
| ||| ||||| | |||||||||| ||||| ||||||||||||| |||||||||||||
Sbjct: 93 gtcagtctggttgcgaactcctgacctcaggtgatccacccgcctcagcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| |||| |||||||||
Sbjct: 33 ctgggattacaggcgtgagccac 11
Score = 65.9 bits (33), Expect = 7e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||| |||||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AADC01020428.1/255356-255076 9606:Homo sapiens
(human)
Length = 281
Score = 157 bits (79), Expect = 2e-37
Identities = 193/229 (84%), Gaps = 7/229 (3%)
Strand = Plus / Minus
Query: 36 cgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcct 93
||||||| |||||| |||| ||||||||||||||||||||||||||||||||| | ||
Sbjct: 235 cgatcttagctcaccgcaacctctgcctcctgggttcaagcgattctcctgtctcaatct 176
Query: 94 cccaagtagctggg-attacaggcactcgccaccacacccagctannnnnnngtattttt 152
|| ||||||||||| |||||||||| ||||||||||||| ||| |||||||
Sbjct: 175 cctaagtagctggggattacaggcatgcgccaccacacccgactaatttta--tattttt 118
Query: 153 antagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcga 212
| ||||||| ||||||| ||| ||| ||||||||||||||||||| ||| ||||| ||
Sbjct: 117 agtagagacagggtttctccat--tggtcaggctggtctcaaactccagacctcaggtga 60
Query: 213 tccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|||| || |||||||||||||||||||||| ||| |||| |||||||||
Sbjct: 59 tccatccaccttggcctcccaaagtgctgggattacaggcgtgagccac 11
Score = 50.1 bits (25), Expect = 4e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggc 394
||||||||| ||||||||||||| ||||||| |||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AADB02020135.1/227858-228150 9606:Homo sapiens
(human)
Length = 293
Score = 157 bits (79), Expect = 2e-37
Identities = 166/195 (85%), Gaps = 3/195 (1%)
Strand = Plus / Minus
Query: 68 ggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccac 125
||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 205 ggttcaagcaattctcctgtctcagcctcctgagtagctgggattacaggcatccgccac 146
Query: 126 cacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggc 185
||| |||||||| ||||||||| || |||| |||||||| ||| ||||||||||
Sbjct: 145 cacgcccagctaattttt-gtatttttagtacagacagggtttcaccatattggccaggc 87
Query: 186 tggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaat 245
||||||| |||||||||| ||| | ||||||||||||| ||||||||||||||||| ||
Sbjct: 86 tggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgctgggat 27
Query: 246 ttcaggtgtgagcca 260
| |||| ||||||||
Sbjct: 26 tacaggcgtgagcca 12
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 360 tggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 12 tggctcacgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;AADD01141232.1/5326-5045 9606:Homo sapiens
(human)
Length = 282
Score = 157 bits (79), Expect = 2e-37
Identities = 200/239 (83%), Gaps = 4/239 (1%)
Strand = Plus / Minus
Query: 28 caatggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg- 86
|||||| | |||||||||||||||||| ||||||||||| |||| ||||||||||||||
Sbjct: 246 caatggcgtgatcttggctcactgcaacctctgcctcctaggtttaagcgattctcctgc 187
Query: 87 -tcagcctcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnng 145
||||||||| |||||||||| ||||||| || | ||||||| |||||||| |
Sbjct: 186 ctcagcctcctgagtagctgggcttacaggtacgcaccaccacgcccagcta-atttttg 128
Query: 146 tattt-ttantagagacggggtttcatcatgttggccaggctggtctcaaactcctgacg 204
||||| ||| |||||||||||||||| || |||| || ||||||||| |||||| ||
Sbjct: 127 tatttcttagtagagacggggtttcaccacattggtcatgctggtctcgaactcccaacc 68
Query: 205 tcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
||||| ||||||||| ||| |||||||||||||||||| ||| |||| || ||||||||
Sbjct: 67 tcaggtgatccacccacctcggcctcccaaagtgctgggattacaggcgttagccactg 9
>RF00017;Metazoa_SRP;AL355543.13/161483-161203 9606:Homo sapiens
(human)
Length = 281
Score = 157 bits (79), Expect = 2e-37
Identities = 201/240 (83%), Gaps = 3/240 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| || | || |||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 258 acccaggctggaatgcagtggtgccatcttagctcactgcaacctctgcctcctgggttc 199
Query: 73 aagcgattctcctg-tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 198 cagcgattctcccgctcagcctcccaagtagctgggattacagggttgtgccatcacacc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| || ||| ||||||||| ||||||||||||||| |||
Sbjct: 138 cagcta-atttttgtatttttagtaaagatggggtttcaccatgttggccaggct-ctct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||| ||| || ||||||| |||| ||||||||||||||||| ||| ||||
Sbjct: 80 ggaactcctgacctcaagcaatccaccagcctcagcctcccaaagtgctgggattacagg 21
Score = 56.0 bits (28), Expect = 6e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 361 ggctcaggcctgtaatcccaacactttgagaggctgaggc 400
|||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 13 ggctcatgcctgtaatcccagcactttgggaggctgaggc 52
>RF00017;Metazoa_SRP;CABD01218082.1/6506-6224 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 157 bits (79), Expect = 2e-37
Identities = 211/255 (82%), Gaps = 3/255 (1%)
Strand = Plus / Minus
Query: 9 tattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgg 68
|||| |||||||| |||| ||||||||| |||| |||||||||||| ||| ||||||||
Sbjct: 264 tattgcccaggctggagttcaatggtgcaatctcggctcactgcaacctccgcctcctga 205
Query: 69 gttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccacc 126
||| ||| |||| ||||| ||||||||||||||||||||||||||||| | |||||
Sbjct: 204 gtttaagtgattatcctgcctcagcctcccaagtagctgggattacaggtgcctgccact 145
Query: 127 acacccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggct 186
|| ||||| || ||||||||| ||||||| |||||||| |||||||| ||||||
Sbjct: 144 acgcccagtta-atttttgtatttttagtagagacagggtttcaccatgttggtcaggct 86
Query: 187 ggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatt 246
|||| || ||||||| ||||| |||||||| || |||||||||||||||||| |||
Sbjct: 85 tgtcttgaagtcctgacctcaggtgatccacctcccccggcctcccaaagtgctgggatt 26
Query: 247 tcaggtgtgagccac 261
|||| |||||||||
Sbjct: 25 acaggcgtgagccac 11
Score = 52.0 bits (26), Expect = 1e-05
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||||| ||||||||||||| ||||||| |||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AANU01197377.1/9650-9932 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 157 bits (79), Expect = 2e-37
Identities = 214/259 (82%), Gaps = 3/259 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||| || |||| | | |||||||| ||| |||||
Sbjct: 268 ctcttgttgcccaggctggagtgcaatggcgcaatctcgacccactgcaacctccgcctc 209
Query: 65 ctgggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgc 122
| ||||||||| ||||||||||| ||||||| |||||||||||||| ||||| ||
Sbjct: 208 cagggttcaagtcattctcctgtctcagcctcctgagtagctgggattataggcatctgc 149
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|| | |||||||| ||||||||| |||||||||||||||| |||||||||||
Sbjct: 148 catgatgcccagctaattttt-gtatttttagtagagacggggtttcaccatgttggcca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
|||||||||| |||||||||| ||||| |||| || |||| |||||||||||||||||
Sbjct: 89 ggctggtctcgaactcctgacctcaggtgatctgcctgcctcagcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccac 261
||| ||||||||||||||
Sbjct: 29 gattacaggtgtgagccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
||||||||| |||||||||||| ||||||| ||||||||||||
Sbjct: 10 ggtggctcacacctgtaatcccagcactttgggaggctgaggca 53
>RF00017;Metazoa_SRP;ABGA01037467.1/10550-10834 9601:Pongo abelii
(Sumatran orangutan)
Length = 285
Score = 155 bits (78), Expect = 9e-37
Identities = 153/179 (85%), Gaps = 1/179 (0%)
Strand = Plus / Minus
Query: 93 tcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtattttt 152
|||| |||||||||||||||||||| |||||||| |||| ||| ||||||||
Sbjct: 178 tcccgagtagctgggattacaggcatgcgccaccatgcccacctaattttt-gtattttt 120
Query: 153 antagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcga 212
| ||||||| ||||||| ||||||||||||||||||||| |||||||| | ||| | ||
Sbjct: 119 agtagagacagggtttcgccatgttggccaggctggtctcgaactcctggcctcaagtga 60
Query: 213 tccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtgcctggc 271
||||||| |||||||||||||||||||||| ||| |||| |||||||||||||||||||
Sbjct: 59 tccacccaccttggcctcccaaagtgctgggattacaggcgtgagccactgtgcctggc 1
Score = 52.0 bits (26), Expect = 1e-05
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 353 ggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
||||| |||||||| ||||||||||||| ||||||| |||||
Sbjct: 5 ggcacagtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;ABGA01183034.1/26107-25804 9601:Pongo abelii
(Sumatran orangutan)
Length = 304
Score = 155 bits (78), Expect = 9e-37
Identities = 178/213 (83%), Gaps = 2/213 (0%)
Strand = Plus / Minus
Query: 57 tctgcctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacag 114
|||||||||||||||||||| |||||| || |||||| | |||||||||||||||||
Sbjct: 217 tctgcctcctgggttcaagccattctcttgcctcagccacttgagtagctgggattacag 158
Query: 115 gcactcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcat 174
|| | |||||||| || |||| | ||||||| ||||||||| || ||| |||
Sbjct: 157 gcgcccgccaccatgcctggctaattttttggatttttagtagagacggagtctcaccat 98
Query: 175 gttggccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaa 234
||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||
Sbjct: 97 gttggccaggctggtctcaaactcctgacctcaggcgacccacctgcctcagcctcccaa 38
Query: 235 agtgctggaatttcaggtgtgagccactgtgcc 267
|||||||| ||| |||| ||||||||||||||
Sbjct: 37 agtgctgggattacaggcatgagccactgtgcc 5
Score = 67.9 bits (34), Expect = 2e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||| |||||||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 4 gggcacagtggctcatgcctgtaatcccagcactttgggaggctgaggca 53
>RF00017;Metazoa_SRP;ABGA01295557.1/2812-2533 9601:Pongo abelii
(Sumatran orangutan)
Length = 280
Score = 155 bits (78), Expect = 9e-37
Identities = 222/269 (82%), Gaps = 6/269 (2%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||||| ||||| |||||| ||| ||| |||||
Sbjct: 265 ctcttgttgcccaggctggagtgcaatggtgtgatctcagctcaccacaacctccgcctc 206
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
||||||||||||||||||||| ||||||||| |||||||||||||| || || |||
Sbjct: 205 ctgggttcaagcgattctccttcctcagcctcctgagtagctgggattatagacatgcgc 146
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|| ||| ||| |||| ||||||||| ||||||||| |||| |||||||| ||
Sbjct: 145 cagcacgcccggctaatttt--gtatttttagtagagacgg--tttctccatgttggtca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
||||||||| |||||| ||| ||||| ||||||||| ||||||||||||||||||||||
Sbjct: 89 ggctggtcttgaactcccgacctcaggtgatccaccctccttggcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccactgtgcctggc 271
||| |||| ||||||||| | |||||||
Sbjct: 29 gattacaggcgtgagccaccgcgcctggc 1
Score = 52.0 bits (26), Expect = 1e-05
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||||| ||||||||||||| ||||||| |||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AACZ02117652.1/369-670 9598:Pan troglodytes
(chimpanzee)
Length = 302
Score = 155 bits (78), Expect = 9e-37
Identities = 207/250 (82%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||| | |||||||||||||| | ||||||||||||||||||
Sbjct: 259 cccaggctggagtgcaatggcaccgtcttggctcactgccacctctgcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
|| |||||| || |||||||| || || |||||||||||||| | ||||||||||
Sbjct: 199 agtcattctcgtgcctcagcctcttgagcagttgggattacaggcatgcaccaccacacc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| || ||| ||||||||| ||||||||||||||||||||
Sbjct: 139 cagctaatttct-gtatttttagtaaagatggggtttcaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||| | |||||||| ||||| ||||||||||||| ||| ||| ||||
Sbjct: 80 cgaactcctgacctcaagtgatccacctgcctttgcctcccaaagtgttgggattacagg 21
Query: 252 tgtgagccac 261
||||||||
Sbjct: 20 catgagccac 11
Score = 65.9 bits (33), Expect = 7e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattacttgtgg 417
||||||||| ||||||||||||||||||||| ||||| ||||| | |||| ||||| ||
Sbjct: 10 ggtggctcatgcctgtaatcccaacactttgggaggcaaaggcaggtggatcacttgagg 69
Query: 418 caaggggctggagaccagcctggacaaca 446
||| | | ||||||||||||| |||||
Sbjct: 70 tcaggagttcgagaccagcctggccaaca 98
>RF00017;Metazoa_SRP;AC100757.2/154316-154034 9606:Homo sapiens
(human)
Length = 283
Score = 155 bits (78), Expect = 9e-37
Identities = 201/242 (83%), Gaps = 3/242 (1%)
Strand = Plus / Minus
Query: 28 caatggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgt 87
|||||| || |||| |||||||||||| |||||||||||||||||||||||| | |||||
Sbjct: 245 caatggcgcaatctcggctcactgcaacctctgcctcctgggttcaagcgatccgcctgt 186
Query: 88 c--agcctcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnng 145
|||| || ||||||||||||||||||| | ||||||| || |||| |
Sbjct: 185 gttagccgcctgagtagctgggattacaggcgcctgccaccaggcctggctaattttt-g 127
Query: 146 tatttttantagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgt 205
|||||||| ||||||| |||||||| || ||||||||||||||||| |||||||||| |
Sbjct: 126 tatttttagtagagacagggtttcaccacattggccaggctggtctcgaactcctgacct 67
Query: 206 caggcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactgtg 265
|||| ||||| || |||| |||||||||||||||||| ||| ||||| ||||||||| ||
Sbjct: 66 caggtgatccgcctgcctcggcctcccaaagtgctgggattacaggtatgagccactttg 7
Query: 266 cc 267
||
Sbjct: 6 cc 5
Score = 46.1 bits (23), Expect = 6e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||| |||||||||||| ||||||| ||||| ||||||
Sbjct: 11 gtggctcatacctgtaatcccagcactttgggaggccgaggca 53
>RF00017;Metazoa_SRP;CABD01036994.1/7404-7687 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 284
Score = 155 bits (78), Expect = 9e-37
Identities = 217/265 (81%), Gaps = 2/265 (0%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
|||||||||||| ||| |||| |||| ||||||||| |||| | |||||||||| || ||
Sbjct: 273 ttcactcttatttcccgggctggagtgcaatggtgcaatctcgactcactgcaacctttg 214
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| |
Sbjct: 213 cctcctgggttcaagccattctcctgccgcagtctccctagtagctgggattacaggtgc 154
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
|||||||| |||||||| ||||||||| | |||| | |||||| || |||
Sbjct: 153 ctgccaccacgcccagctaattttttgtatttttagtgcagacagygtttcactatattg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
||||||||||||| ||||| |||| ||||| |||||||| |||| |||||||||| ||
Sbjct: 93 gccaggctggtcttgaactcttgacctcaggtgatccacctgcctcagcctcccaaaatg 34
Query: 239 ctggaatttcaggtgtgagccactg 263
|||| ||| ||| |||||||||||
Sbjct: 33 ctgggattacagacgtgagccactg 9
Score = 46.1 bits (23), Expect = 6e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||| | ||||||||||| || |||| ||||||||||||
Sbjct: 11 gtggctcacgtctgtaatcccagcattttgggaggctgaggca 53
>RF00017;Metazoa_SRP;CABD01013935.1/10958-10676 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 155 bits (78), Expect = 9e-37
Identities = 185/221 (83%), Gaps = 3/221 (1%)
Strand = Plus / Minus
Query: 45 ctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagtag 102
|||||||||| ||||||||| |||| |||| ||||||||||| ||||||| ||||||
Sbjct: 228 ctcactgcaacgtctgcctcccaggtttaagcaattctcctgtctcagcctcctaagtag 169
Query: 103 ctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagacg 162
||||||||||||| | ||||||| |||||||| |||||||| |||||||
Sbjct: 168 atgggattacaggcgcgtgccaccatgcccagctaattttta-tatttttagtagagaca 110
Query: 163 gggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgcc 222
|||||||| ||||||||||||||||||||| |||||||||| ||||| ||||| ||| |
Sbjct: 109 gggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccgcccaac 50
Query: 223 ttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 49 tcagcctcccaaagtgctgggattacaggtgtgagccactg 9
Score = 48.1 bits (24), Expect = 2e-04
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgag 398
|||||||| |||||||||||| ||||||| |||||||||
Sbjct: 11 gtggctcacacctgtaatcccagcactttgggaggctgag 50
>RF00017;Metazoa_SRP;AANU01174293.1/18139-18421 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 155 bits (78), Expect = 9e-37
Identities = 183/218 (83%), Gaps = 3/218 (1%)
Strand = Plus / Minus
Query: 45 ctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagtag 102
|||||||||| |||||||| ||| |||| ||||||||||||||| ||||||| |||||
Sbjct: 228 ctcactgcaacctctgcctgctgtgttccagcgattctcctgtctcagcctcctgagtag 169
Query: 103 ctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagacg 162
|||||||||||||||| ||||||| || |||| |||| |||| |||||| |
Sbjct: 168 ctgggattacaggcacctgccaccatgcctggctaattttt-gtatatttagtagagatg 110
Query: 163 gggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgcc 222
|||||||||||||||| |||||||||| | |||||||||| ||||| |||||||| |||
Sbjct: 109 gggtttcatcatgttgaccaggctggttttgaactcctgacctcaggtgatccacctgcc 50
Query: 223 ttggcctcccaaagtgctggaatttcaggtgtgagcca 260
| |||||||||||||||||| ||| ||| |||||||||
Sbjct: 49 tcggcctcccaaagtgctgggattacagatgtgagcca 12
>RF00017;Metazoa_SRP;ABGA01338117.1/939-1240 9601:Pongo abelii
(Sumatran orangutan)
Length = 302
Score = 153 bits (77), Expect = 4e-36
Identities = 185/221 (83%), Gaps = 3/221 (1%)
Strand = Plus / Minus
Query: 45 ctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagtag 102
||||||||| ||||||||||| ||||||||| |||||| || ||||||||| |||||
Sbjct: 228 ctcactgcagcctctgcctcctaggttcaagcaattctcgtgcctcagcctcctgagtag 169
Query: 103 ctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagacg 162
|||||||||||||| | |||||||| | |||| ||||||||| ||||||||
Sbjct: 168 ctgggattacaggcgcctgccaccacgtctggctaattttg-gtatttttagtagagacg 110
Query: 163 gggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgcc 222
| ||||| |||||||||||||||||||| |||||||||| ||||||||||| || |||
Sbjct: 109 gagtttcgccatgttggccaggctggtcttgaactcctgacctcaggcgatccgcctgcc 50
Query: 223 ttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
| |||||||||||||||||| ||| |||| |||||||||||
Sbjct: 49 tcggcctcccaaagtgctgggattacaggcgtgagccactg 9
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||| ||||||||||||| ||||||| ||||| ||||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggccgaggca 53
>RF00017;Metazoa_SRP;ABGA01196063.1/20518-20803 9601:Pongo abelii
(Sumatran orangutan)
Length = 286
Score = 153 bits (77), Expect = 4e-36
Identities = 182/217 (83%), Gaps = 3/217 (1%)
Strand = Plus / Minus
Query: 49 ctgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgg 106
|||||| |||||||||||||||||||| ||||| |||| ||||||||| ||||| |||
Sbjct: 224 ctgcaacctctgcctcctgggttcaagtgattcccctgcttcagcctcctaagtaaatgg 165
Query: 107 gattacaggcactcgccaccacacccagctannnnnnngtatttttantagagacggggt 166
||||||||| | | |||| ||||||||||| ||||||||| ||||||||||||
Sbjct: 164 gattacaggtgcccaccacaacacccagctaattttt-gtatttttagtagagacggggt 106
Query: 167 ttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgccttgg 226
|||| |||||||||||||||| || |||||||||| ||| | |||||||| ||| ||
Sbjct: 105 ttcaccatgttggccaggctgtccttgaactcctgacttcatgtgatccacctacctcgg 46
Query: 227 cctcccaaagtgctggaatttcaggtgtgagccactg 263
|||||||||||||||| ||| |||| |||||||||||
Sbjct: 45 cctcccaaagtgctgggattacaggcgtgagccactg 9
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;ABGA01177534.1/7970-7688 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 153 bits (77), Expect = 4e-36
Identities = 209/253 (82%), Gaps = 3/253 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| ||||||||||| || |||| | |||||| || ||||| || | ||||
Sbjct: 260 acccaggctggagtccaatggcgcaatctctgttcactgtaacctctgtcttccaggttt 201
Query: 73 aagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacac 130
|||| ||||||||||| ||||||| |||||||||||||||| |||| | ||||||||
Sbjct: 200 aagccattctcctgtcttagcctcctgagtagctgggattacaagcacccaccaccacag 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
| |||| |||| |||| |||||||||||||||| ||||||||||||| |||||
Sbjct: 140 ctggctaattttc-gtatatttaatagagacggggtttcaccatgttggccaggttggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
|||||||||||| ||| | ||||||||| |||||||||||||||||| ||| ||| |||
Sbjct: 81 tcaaactcctgagctcaagtgatccacccaccttggcctcccaaagtgttgggattacag 22
Query: 251 gtgtgagccactg 263
| |||||||||||
Sbjct: 21 gcgtgagccactg 9
Score = 56.0 bits (28), Expect = 6e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggc 394
|||||||| ||||||||||||||||||||| |||||
Sbjct: 11 gtggctcacgcctgtaatcccaacactttgggaggc 46
>RF00017;Metazoa_SRP;ABGA01397540.1/2954-3235 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 153 bits (77), Expect = 4e-36
Identities = 215/261 (82%), Gaps = 4/261 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||||| || |||| |||||||||||| || ||||||
Sbjct: 267 ctcttgttgcccaggctggagtgcaatggcgccatctcggctcactgcaacctgtgcctc 208
Query: 65 ctgggttcaagcgattctcc--tgtcagcctcccaagtagctgggattacaggcactcgc 122
|||||||||||||||||||| | ||||||||| ||||||||||||||||||| | ||
Sbjct: 207 ctgggttcaagcgattctcctatctcagcctcctaagtagctgggattacaggaatgtgc 148
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||||| |||||||| || |||||| ||||||| ||||||| ||| |||| ||
Sbjct: 147 caccatgcccagcta--attttgtgtttttagtagagacagggtttctccatattggtca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
||||||||| ||| ||||| ||||| ||||| ||| ||| |||||||||||||||||
Sbjct: 89 ggctggtcttgaacccctgatctcaggtgatccgcccacctcagcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccactg 263
||| |||| |||||||||||
Sbjct: 29 gattacaggcgtgagccactg 9
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 11 gtggctcacgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AADA01108662.1/8975-8682 9598:Pan troglodytes
(chimpanzee)
Length = 294
Score = 153 bits (77), Expect = 4e-36
Identities = 171/204 (83%), Gaps = 2/204 (0%)
Strand = Plus / Minus
Query: 60 gcctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggca 117
||||||||||||||||| ||||||||| ||||||||| | | | |||||||||||||
Sbjct: 214 gcctcctgggttcaagccattctcctgcctcagcctcctgaattgttgggattacaggct 155
Query: 118 ctcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgtt 177
| |||||||| || |||| ||||||||| |||||||||| ||||| ||| ||
Sbjct: 154 cctgccaccacgccaggctaattttttgtatttttagtagagacgggatttcaccatttt 95
Query: 178 ggccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagt 237
||||||||||||||| |||||||| | ||||| ||||||||||||| |||||||||||||
Sbjct: 94 ggccaggctggtctcgaactcctggcctcaggggatccacccgcctcggcctcccaaagt 35
Query: 238 gctggaatttcaggtgtgagccac 261
||||| ||| |||| |||||||||
Sbjct: 34 gctgggattacaggcgtgagccac 11
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||||||| ||||||||||||| ||||||| ||||| |||||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggccgaggc 52
>RF00017;Metazoa_SRP;AC092536.3/72406-72102 9606:Homo sapiens
(human)
Length = 305
Score = 153 bits (77), Expect = 4e-36
Identities = 206/249 (82%), Gaps = 3/249 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
||||||||||| | |||||| ||||||| ||||||||| ||| ||||||||||||||
Sbjct: 259 cccaggctagaatgcaatggcatgatcttgcatcactgcaacctccgcctcctgggttca 200
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||||| ||||||| |||||||||||||||||||| | |||||| ||
Sbjct: 199 agcaattctcctgtctcagcctcctgagtagctgggattacaggcatccaccaccaggcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| ||||||||| ||||||| |||||||| || |||||||||||||||||
Sbjct: 139 cagctaattttt-gtatttttagtagagaccgggtttcaccacgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||| | ||||| |||| ||| ||| ||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctggcctcaggtgatcagcccacctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagcca 260
|||||||
Sbjct: 20 catgagcca 12
Score = 56.0 bits (28), Expect = 6e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 360 tggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 12 tggctcatgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AADD01159520.1/9861-9582 9606:Homo sapiens
(human)
Length = 280
Score = 153 bits (77), Expect = 4e-36
Identities = 210/252 (83%), Gaps = 6/252 (2%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
||||| || |||| |||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 256 cccagactggagtgcaatggtgcgatctcagctcactgcaacctctgccttctgggttca 197
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||||| ||| ||||| |||| |||||||||||||| | || |||| ||
Sbjct: 196 agcgattctcctgcctcaacctccttagtaactgggattacaggcgc--gctaccatgcc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
| ||| ||||||||| ||||||| |||||||| |||||||||||||||||||
Sbjct: 138 ccactaattttt-gtatttttaatagagacagggtttcactatgttggccaggctggtct 80
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||||| ||||| ||||| ||| ||| ||||| |||||||||||| ||| ||||
Sbjct: 79 caaactcctgacctcaggtgatccgccctcctcggcct-ccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
|| ||||||||
Sbjct: 20 cgttagccactg 9
>RF00017;Metazoa_SRP;ABSL01046864.1/6571-6851 9606:Homo sapiens
(human)
Length = 281
Score = 153 bits (77), Expect = 4e-36
Identities = 199/240 (82%), Gaps = 3/240 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| |||||| | ||||| |||||||||||| ||||||||||||||||||
Sbjct: 259 cccaggctggagtgcaatggcgtgatctcggctcactgcaacctctgcctcctgggttca 200
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| ||| ||||| ||||||||||||||||||| | | | ||| ||
Sbjct: 199 agcaattctcctgcctcaacctccttagtagctgggattacaggcgtgcactatcacgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
||| || |||||||| ||||||| |||||| |||||||| |||||||||||
Sbjct: 139 caggtaatttttt-tatttttagtagagacaaggtttctccatgttggtcaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||| ||| ||||| |||||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcccgacctcaggtgatccacctgccttggcctcccaaagtgctgggattacagg 21
Score = 46.1 bits (23), Expect = 6e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggc 394
|||| |||||||| | ||||||||||||| ||||||| |||||
Sbjct: 4 gggcgcggtggcttatgcctgtaatcccagcactttgggaggc 46
>RF00017;Metazoa_SRP;AC068722.6/3090-2807 9606:Homo sapiens (human)
Length = 284
Score = 153 bits (77), Expect = 4e-36
Identities = 190/228 (83%), Gaps = 3/228 (1%)
Strand = Plus / Minus
Query: 36 cgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcct 93
||||||||||||||||||| ||||||||||||||||||||| |||||| |||| |||||
Sbjct: 237 cgatcttggctcactgcaacctctgcctcctgggttcaagcaattctcttgtcttagcct 178
Query: 94 cccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtattttta 153
|| ||||||| |||||| |||||| |||||||| || |||| ||||||||
Sbjct: 177 cctgagtagctaggattataggcacctgccaccacgcctggctaattttcc-tattttta 119
Query: 154 ntagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgat 213
|||||||||||||| | |||||||||||||||| ||| ||||||||| ||| | |||
Sbjct: 118 gtagagacggggttttaccatgttggccaggctgttcttgaactcctgaactcaagtgat 59
Query: 214 ccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|||||| ||| ||||||||||||||||| ||| |||| |||||||||
Sbjct: 58 ccacccacctcagcctcccaaagtgctgggattacaggcgtgagccac 11
Score = 63.9 bits (32), Expect = 3e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||| |||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AC006160.9/104934-105234 9606:Homo sapiens
(human)
Length = 301
Score = 153 bits (77), Expect = 4e-36
Identities = 184/220 (83%), Gaps = 6/220 (2%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagta 101
|||||||||| ||||||||||||||||||||| ||||||||| |||||| || ||||
Sbjct: 226 gctcactgcagcctctgcctcctgggttcaagccattctcctgcctcagccacctgagta 167
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
|||||||||||||||| ||||||||||| | | | ||||||||| |||||||
Sbjct: 166 gctgggattacaggcatgcgccaccacactcggat----ttttgtatttttagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
||||||||| |||||| |||||||||||| |||||||||| ||| | ||||||||||
Sbjct: 110 ggggtttcacagtgttggtcaggctggtctcgaactcctgacctcaagtgatccacccgt 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| |||||||||| |||||| ||| ||||||||||||||
Sbjct: 50 ctcagcctcccaaaatgctgggattacaggtgtgagccac 11
Score = 46.1 bits (23), Expect = 6e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgag 398
|||| |||||||||| |||||||||||| || |||| |||||||||
Sbjct: 4 gggcgcggtggctcacacctgtaatcccagcattttgggaggctgag 50
>RF00017;Metazoa_SRP;AC068675.17/76187-76471 9606:Homo sapiens
(human)
Length = 285
Score = 153 bits (77), Expect = 4e-36
Identities = 214/260 (82%), Gaps = 3/260 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| || | |||||||| |||||||||||||||||| ||| ||||
Sbjct: 270 ctcttgttgcccaggctggattgcaatggtgtgatcttggctcactgcaacctccgcctg 211
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
||||||| ||||||||||||| ||||||||| |||||||||||||||||| | |||
Sbjct: 210 ctgggtttgagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcccgc 151
Query: 123 caccacacccagct-annnnnnngtatttttantagagacggggtttcatcatgttggcc 181
|||||||||| ||| | || |||||| ||||||| || ||||| ||||||||||
Sbjct: 150 caccacacccggctaattgttttgtgtttttagtagagacaggatttcaccatgttggcc 91
Query: 182 aggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctg 241
|||||||||| |||||||| | | | | ||||||||| ||| ||||||||||||||||
Sbjct: 90 aggctggtcttgaactcctgtcctgaagtgatccacccacctcagcctcccaaagtgctg 31
Query: 242 gaatttcaggtgtgagccac 261
| ||| || | |||||||||
Sbjct: 30 ggattacaagcgtgagccac 11
>RF00017;Metazoa_SRP;AADC01070133.1/185775-186058 9606:Homo sapiens
(human)
Length = 284
Score = 153 bits (77), Expect = 4e-36
Identities = 183/220 (83%), Gaps = 2/220 (0%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
||||||||||| |||||||||| |||||||||||||| |||||| ||||||| ||||
Sbjct: 230 gctcactgcaacctctgcctcccgggttcaagcgatttccctgtctcagcctcctgagta 171
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
|||||||||| | | | | |||||||||| |||| ||||||||| |||||||
Sbjct: 170 gctgggattataagtgcccaccaccacacctggctaattttttgtatttttagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||| ||||||| ||||||||||||| |||||||||| ||||| ||||||||| |
Sbjct: 110 cgggtttcaccatgttgtccaggctggtctcgaactcctgacctcaggtgatccacccac 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| ||||||||||||||||| ||| |||| ||||||||
Sbjct: 50 ctcagcctcccaaagtgctgggattacaggcttgagccac 11
Score = 60.0 bits (30), Expect = 4e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 10 ggtggctcaagcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AANU01190431.1/709-429 9544:Macaca mulatta
(rhesus monkey)
Length = 281
Score = 153 bits (77), Expect = 4e-36
Identities = 219/265 (82%), Gaps = 5/265 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| ||||||||||||| |||||||| | || ||||||||
Sbjct: 266 ctcttgttgcccaggctggagtacaatggtgcgatcctggctcacagaaacctctgcctg 207
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
| |||||||||| ||| ||||| | ||||||| ||||||||||||||||||||| |||
Sbjct: 206 ccgggttcaagcaattatcctgccttagcctcctaagtagctgggattacaggcatgcgc 147
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|||||||| |||||| ||||||||| ||||||| | ||||| |||||||| |
Sbjct: 146 caccacactcagcta--attttgtatttttaatagagacagagtttctccatgttggtc- 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
||||||||| |||||||||| ||||| ||||| || |||| |||||||||||||||||
Sbjct: 89 tgctggtctcgaactcctgacctcaggtgatccgcctgcctcagcctcccaaagtgctgg 30
Query: 243 aatttcaggtgtgagccactgtgcc 267
||| |||| |||||||| |||||
Sbjct: 29 gattacaggcatgagccaccgtgcc 5
Score = 75.8 bits (38), Expect = 7e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
||||||||||||||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 4 gggcacggtggctcatgcctgtaatcccagcactttgggaggctgaggca 53
>RF00017;Metazoa_SRP;AANU01289128.1/38957-38676 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 153 bits (77), Expect = 4e-36
Identities = 207/252 (82%), Gaps = 2/252 (0%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 260 cccaggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcctgggttca 201
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| ||||||||| ||||||||||||||||||| | |||||| ||
Sbjct: 200 agcaattctcctgtctcagcctcctgagtagctgggattacaggcgggcaccaccatgcc 141
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| |||||| | ||||| ||||||| ||||||||||||||||||||
Sbjct: 140 cagctaatttttgtattttttagtggagaccaggtttcaccatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||| ||||| ||||||||| |||||||||||||| |||||| ||| | |
Sbjct: 80 tgaactcctgacctcaggtgatccacccttcttggcctcccaaaatgctgggattataag 21
Query: 252 tgtgagccactg 263
|||||||||||
Sbjct: 20 cgtgagccactg 9
>RF00017;Metazoa_SRP;AANU01232491.1/12086-12368 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 153 bits (77), Expect = 4e-36
Identities = 215/261 (82%), Gaps = 3/261 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || |||||| |||| |||||||||||| |||||||||||||||
Sbjct: 260 acccaggctggagtgcagtggtgcaatctcggctcactgcaacttctgcctcctgggttt 201
Query: 73 aagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacac 130
|||||||||||||||| || |||| ||||||| |||||||||| | ||||||| |
Sbjct: 200 aagcgattctcctgtctcagtctcctgagtagcttggattacaggtgcctgccaccatgc 141
Query: 131 ccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtc 190
||||||| ||||||||| | ||||| |||||||| |||||||||||||||||||
Sbjct: 140 ccagctaattttt-gtatttttagtggagaccgggtttcaccatgttggccaggctggtc 82
Query: 191 tcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
| ||||||| || ||| | ||||| || ||||||||||| |||| ||||| ||| |||
Sbjct: 81 ttgaactccttacctcaagtgatccgcctgccttggcctcttaaagagctgggattacag 22
Query: 251 gtgtgagccactgtgcctggc 271
| ||||||||||| |||||||
Sbjct: 21 gcgtgagccactgcgcctggc 1
Score = 48.1 bits (24), Expect = 2e-04
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattacttgtggc 418
|||||||| ||||||||||||| | |||| |||||| ||||| | |||| ||||| ||
Sbjct: 11 gtggctcacgcctgtaatcccagctctttaagaggccaaggcaggcggatcacttgaggt 70
Query: 419 aaggggctggagaccagcctggacaaca 446
|||| | | |||||||||||| |||||
Sbjct: 71 aaggagttcaagaccagcctggccaaca 98
>RF00017;Metazoa_SRP;ABGA01084726.1/3367-3650 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 151 bits (76), Expect = 1e-35
Identities = 188/227 (82%), Gaps = 2/227 (0%)
Strand = Plus / Minus
Query: 37 gatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctc 94
||||| ||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 237 gatctcggctcactgcagcctctgtctcctgggttcaagcaattctcctgtctcagcctc 178
Query: 95 ccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttan 154
| |||||||||||||||||| | |||||| || |||| ||| |||||
Sbjct: 177 ctgagtagctgggattacaggtgcctaccaccatgcctggctaatttttggtagttttag 118
Query: 155 tagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatc 214
||||||| ||||||| |||||||||||||||||||||||||||||||| ||| | ||||
Sbjct: 117 tagagacagggtttctccatgttggccaggctggtctcaaactcctgacctcaagtgatc 58
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
| || |||| |||||||||||||||||| ||| |||| |||||||||
Sbjct: 57 cgcctgcctcggcctcccaaagtgctgggattacaggagtgagccac 11
Score = 56.0 bits (28), Expect = 6e-07
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattacttgtggc 418
|||||||| |||||||||||| ||||||| ||||| |||||| | |||| ||||| ||
Sbjct: 11 gtggctcactcctgtaatcccagcactttgggaggccgaggcaggcggatcacttgaggt 70
Query: 419 aaggggctggagaccagcctggacaaca 446
||| | | ||||||||||||| |||||
Sbjct: 71 caggagtttgagaccagcctggccaaca 98
>RF00017;Metazoa_SRP;ABGA01251873.1/10297-10016 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 151 bits (76), Expect = 1e-35
Identities = 213/259 (82%), Gaps = 4/259 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
||||| || |||||||| |||| |||| | || |||| | |||||||||| ||| ||||
Sbjct: 267 ctcttgttgcccaggctggagtgcaatcgcgccatctcgactcactgcaacctccgcctg 208
Query: 65 ctgggttcaagcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgc 122
|||| |||||| |||||||||||| ||||||| ||||| |||||||||||||| | |
Sbjct: 207 ctggcttcaagtgattctcctgtctcagcctcctgagtagttgggattacaggcatacac 148
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
||||| |||||||| |||||||| ||||||| ||||||| |||||||| ||
Sbjct: 147 caccatgcccagctaatttta--tatttttagtagagacagggtttctccatgttggtca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
|||||||||||||||||||| ||||| |||||||| |||| |||||||||||||||| |
Sbjct: 89 ggctggtctcaaactcctgatctcaggtgatccacctgcctcggcctcccaaagtgctag 30
Query: 243 aatttcaggtgtgagccac 261
||| |||| |||||||||
Sbjct: 29 gattacaggcgtgagccac 11
Score = 48.1 bits (24), Expect = 2e-04
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
||||||||| ||||||||||| | ||||||| ||||| ||||||
Sbjct: 10 ggtggctcacgcctgtaatcctagcactttgggaggccgaggca 53
>RF00017;Metazoa_SRP;ABGA01338212.1/1509-1791 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 151 bits (76), Expect = 1e-35
Identities = 184/220 (83%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
||||||||||| ||| || ||||||||| |||| ||| ||||||| || ||||||||||
Sbjct: 229 gctcactgcaacctccgcttcctgggttaaagccattttcctgtctcagactcccaagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
|||||||||||||||| ||||||||| |||||||| ||||||||| ||| ||
Sbjct: 169 gctgggattacaggcatccgccaccacgcccagctaattttt-gtatttttagtagggat 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
| ||||||| |||| |||||||||||||||| |||||||||| ||||| |||| |||
Sbjct: 110 gaggtttcaccatgatggccaggctggtctcgaactcctgacctcaggtaatccgcccat 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| |||||||||||||||||| ||| ||| ||||||||||
Sbjct: 50 ctcggcctcccaaagtgctgggattacagatgtgagccac 11
>RF00017;Metazoa_SRP;AACZ02177801.1/22046-21749 9598:Pan troglodytes
(chimpanzee)
Length = 298
Score = 151 bits (76), Expect = 1e-35
Identities = 215/261 (82%), Gaps = 3/261 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||| | |||| ||||||| |||| |||||
Sbjct: 268 ttcactcttgttgcccaggctggagtgcaatggcacaatctcggctcaccgcaacctctg 209
Query: 61 cctcctgggttcaagcgattctcctgtcagcctcccaagtagctgggattacaggcactc 120
|||||||||||||||| |||| | |||||||||| |||||||||||||||||||| |
Sbjct: 208 cctcctgggttcaagcacttctgcc-tcagcctccctagtagctgggattacaggcatgc 150
Query: 121 gccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggc 180
|||||| ||| |||| ||||||||| ||||||| ||||||| || ||||
Sbjct: 149 accaccatgcccggctaatttt--gtatttttagtagagacagggtttctctatattggt 92
Query: 181 caggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgct 240
|||||||||||| | |||| ||| ||||| |||||||| |||| ||||||||||||||||
Sbjct: 91 caggctggtctcgagctcccgacctcaggtgatccacctgcctcggcctcccaaagtgct 32
Query: 241 ggaatttcaggtgtgagccac 261
|| ||| |||| |||||||||
Sbjct: 31 gggattacaggcgtgagccac 11
Score = 60.0 bits (30), Expect = 4e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||| |||||||||| ||||||||||||| ||||||| ||||| ||||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggca 53
>RF00017;Metazoa_SRP;AADA01176124.1/10115-9833 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 151 bits (76), Expect = 1e-35
Identities = 184/220 (83%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
||||||||||| ||| ||||||||||| |||||||||||||||| ||||||| ||||
Sbjct: 229 gctcactgcaacctccacctcctgggtttaagcgattctcctgtctcagcctcctgagta 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
|||||||||| ||||| ||||||||| || |||| ||||||||| |||||||
Sbjct: 169 gctgggattatgggcacctgccaccacaaccggctaattttt-gtatttttagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
|||||||| |||||||| |||||||||| | |||||||||| ||||| ||||||||| |
Sbjct: 110 agggtttcaccatgttggtcaggctggtcccgaactcctgacctcaggtgatccacccac 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|| ||||||||||||||||| ||| |||| ||||||||
Sbjct: 50 ctcagcctcccaaagtgctgggattacaggcatgagccac 11
Score = 63.9 bits (32), Expect = 3e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
||||| ||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 4 gggcatggtggctcatgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AADA01003203.1/9383-9681 9598:Pan troglodytes
(chimpanzee)
Length = 299
Score = 151 bits (76), Expect = 1e-35
Identities = 215/261 (82%), Gaps = 3/261 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||| | |||| ||||||| |||| |||||
Sbjct: 268 ttcactcttgttgcccaggctggagtgcaatggcacaatctcggctcaccgcaacctctg 209
Query: 61 cctcctgggttcaagcgattctcctgtcagcctcccaagtagctgggattacaggcactc 120
|||||||||||||||| |||| | |||||||||| |||||||||||||||||||| |
Sbjct: 208 cctcctgggttcaagcacttctgcc-tcagcctccctagtagctgggattacaggcatgc 150
Query: 121 gccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggc 180
|||||| ||| |||| ||||||||| ||||||| ||||||| || ||||
Sbjct: 149 accaccatgcccggctaatttt--gtatttttagtagagacagggtttctctatattggt 92
Query: 181 caggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgct 240
|||||||||||| | |||| ||| ||||| |||||||| |||| ||||||||||||||||
Sbjct: 91 caggctggtctcgagctcccgacctcaggtgatccacctgcctcggcctcccaaagtgct 32
Query: 241 ggaatttcaggtgtgagccac 261
|| ||| |||| |||||||||
Sbjct: 31 gggattacaggcgtgagccac 11
Score = 60.0 bits (30), Expect = 4e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||| |||||||||| ||||||||||||| ||||||| ||||| ||||||
Sbjct: 4 gggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggca 53
>RF00017;Metazoa_SRP;AACZ02070716.1/27787-27507 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 151 bits (76), Expect = 1e-35
Identities = 217/263 (82%), Gaps = 5/263 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||| | ||||||||||||||||| |||
Sbjct: 270 ttcactcttgttgcccaggctggagtgcaatggcacaatcttggctcactgcaacctcca 211
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|| ||||||| ||| |||||||||| |||||||||||||||||||||| || || ||
Sbjct: 210 cccactgggtttaagtgattctcctgcctcagcctcccaagtagctgggactatagccat 151
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
||||||||| |||||||| |||||| | |||||||| ||||||| |||||||
Sbjct: 150 gcgccaccacgcccagctaattttt-gtattt--agtagagacgaggtttcaccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
|||||||||||| |||||||||| ||||| |||||||| |||| |||||||||||||
Sbjct: 93 ttcaggctggtctcgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| |||| ||||||||
Sbjct: 33 ctgggattacaggcatgagccac 11
Score = 65.9 bits (33), Expect = 7e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattacttgtgg 417
||||||||| ||||||||||||| ||||||| |||||||||||| | |||| || || ||
Sbjct: 10 ggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgagg 69
Query: 418 caaggggctggagaccagcctggacaaca 446
||| | | |||||||||||| ||||||
Sbjct: 70 tcaggagttcgagaccagcctgaacaaca 98
>RF00017;Metazoa_SRP;AADC01118446.1/254522-254241 9606:Homo sapiens
(human)
Length = 282
Score = 151 bits (76), Expect = 1e-35
Identities = 212/256 (82%), Gaps = 4/256 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| ||| ||||| || ||||| |||||||||||| ||||| |||| |||||||
Sbjct: 258 cccaggctggagcacaatgatgtgatctcggctcactgcaacctctgtctcccgggttca 199
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||| ||| ||||||| |||||||| || |||| || | ||||||| ||
Sbjct: 198 agcgattctcccgtctcagcctcctgagtagctgcgactacaa-catgcaccaccacgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||||| | ||||||| |||||||||| ||| | |||||||||||||||| |||
Sbjct: 139 cagctaattttt-gcatttttagtagagacgggattttaccatgttggccaggctgatct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
| |||||||||| ||||| ||||||||| ||| ||||||||||||||||| ||| ||||
Sbjct: 80 cgaactcctgacctcaggtgatccaccctcctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactgtgcc 267
|||||||||||||||
Sbjct: 20 cgtgagccactgtgcc 5
Score = 63.9 bits (32), Expect = 3e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||| |||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 4 gggcacagtggctcacgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AADB02036916.1/602388-602106 9606:Homo sapiens
(human)
Length = 283
Score = 151 bits (76), Expect = 1e-35
Identities = 208/252 (82%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||| ||||||| |||||||||||| |||||||||| ||||||
Sbjct: 259 cccaggctggagtgcagtggcgcgatctcggctcactgcaacctctgcctcccaggttca 200
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||||| ||||||| || |||| ||| ||||||||| ||||||| ||
Sbjct: 199 agcaattctcctgtctcagcctcctgaggagctaggactacaggcacctgccaccatgcc 140
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||| ||||||||| ||||||| ||||||| ||| |||| ||||| |||||
Sbjct: 139 tggctaattttt-gtatttttagtagagacagggtttcgccatattggtcaggccggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||| ||||||||||||||| ||| ||||||||||||||||| ||| ||||
Sbjct: 80 tgaactcctgacctcaggcgatccacccacctcagcctcccaaagtgctgggattacagg 21
Query: 252 tgtgagccactg 263
||||||||||||
Sbjct: 20 tgtgagccactg 9
Score = 50.1 bits (25), Expect = 4e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| |||||||||||| ||||||| ||||||||||
Sbjct: 11 gtggctcacacctgtaatcccagcactttgggaggctgagg 51
Score = 48.1 bits (24), Expect = 2e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 432 ccagcctggacaacagagcaagactccgtctc 463
||||||||| ||||||||||||||||| ||||
Sbjct: 250 ccagcctgggcaacagagcaagactccatctc 281
>RF00017;Metazoa_SRP;AANU01292852.1/19895-20182 9544:Macaca mulatta
(rhesus monkey)
Length = 288
Score = 151 bits (76), Expect = 1e-35
Identities = 190/228 (83%), Gaps = 4/228 (1%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcc 95
|||| ||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 234 atctcggctcaccgcaacctctgcctcctgggttcaagcgattctcctgcctcagcttcc 175
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
||||||||||||||| |||| | |||||| ||| |||| ||||||||| |
Sbjct: 174 taagtagctgggattataggcttgcaccaccaaacctggctaatttt--gtatttttagt 117
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
||||| ||||||| |||||||| ||||||||||| |||||||||| || || ||||
Sbjct: 116 ggagacagggtttctccatgttggtcaggctggtctggaactcctgacctccggtgatct 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
||| ||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 56 accagccttagcctcccaaagtgctgggattacaggtgtgagccactg 9
>RF00017;Metazoa_SRP;AANU01172237.1/32329-32047 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 151 bits (76), Expect = 1e-35
Identities = 181/216 (83%), Gaps = 3/216 (1%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctgtc--agcctcccaagta 101
||||||||||| ||| ||||||||||||| || ||||||||||| ||||||| || |
Sbjct: 229 gctcactgcaacctccacctcctgggttcacgcaattctcctgtctcagcctcctgagca 170
Query: 102 gctgggattacaggcactcgccaccacacccagctannnnnnngtatttttantagagac 161
||| |||||||||| || ||||||||||||||||| ||||||||| |||||||
Sbjct: 169 gctcggattacaggggcttgccaccacacccagctaattttt-gtatttttagtagagac 111
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatccacccgc 221
||| ||||| ||| ||| ||||||||||| |||||||||| ||||| |||||||||||
Sbjct: 110 gggatttcaccatattgatcaggctggtcttgaactcctgacctcaggtgatccacccgc 51
Query: 222 cttggcctcccaaagtgctggaatttcaggtgtgag 257
|| |||||||||||||||||| ||| |||| |||||
Sbjct: 50 ctcggcctcccaaagtgctgggattacaggcgtgag 15
Score = 48.1 bits (24), Expect = 2e-04
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgaggc 400
||||| |||| ||||||||||||| ||||||| ||||| |||||
Sbjct: 9 cggtgtctcacgcctgtaatcccagcactttgggaggccgaggc 52
>RF00017;Metazoa_SRP;ABGA01230818.1/8679-8961 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 149 bits (75), Expect = 6e-35
Identities = 216/263 (82%), Gaps = 3/263 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| ||||||| | |||| |||||||||| ||| |
Sbjct: 272 ttcactcttgttgcccaggctggagtgcaatggtatggtcttatctcactgcaacctccg 213
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
||||||||||||| | |||||||||| ||||||||| |||||||||||| ||||||
Sbjct: 212 cctcctgggttcaggtgattctcctgcctcagcctcctgagtagctgggatgacaggcgt 153
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
|||||||||||||||||| |||||| || | ||||| |||||||| |||||||
Sbjct: 152 ccgccaccacacccagcta-atttttgtatttatagtggagacagggtttcaccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
| ||||||||| | |||||||||| ||||| |||| ||| ||| |||||||||||||
Sbjct: 93 gtcaggctggttttgaactcctgacctcaggtgatctgccctcctcagcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
|||| ||| |||| |||||||||
Sbjct: 33 ctgggattacaggcgtgagccac 11
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 9 cggtggctcacgcctgtaatcccagcactttgggaggctgagg 51
>RF00017;Metazoa_SRP;ABGA01099339.1/28259-27977 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 149 bits (75), Expect = 6e-35
Identities = 213/259 (82%), Gaps = 3/259 (1%)
Strand = Plus / Minus
Query: 5 ctcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctc 64
|||||||| |||||||| |||| || ||| ||||||||| |||||||| ||| ||||
Sbjct: 268 ctcttattgcccaggctggagtgcagtggcaagatcttggcgcactgcaacttctacctc 209
Query: 65 ctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgc 122
| ||||| |||| ||||||||| || |||||| ||||||||||||||||||||| |||
Sbjct: 208 ccgggtttaagcaattctcctgcctctgcctcctgagtagctgggattacaggcacccgc 149
Query: 123 caccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttggcca 182
|||||| |||||||| ||| ||||| ||||||||||||||| || ||||| ||
Sbjct: 148 caccacgcccagcta-atttttgtacttttagtagagacggggtttcgccacgttgggca 90
Query: 183 ggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctgg 242
||||||||| |||||||||| ||||| |||| ||| || |||||||||||| ||||||
Sbjct: 89 ggctggtcttgaactcctgacctcaggtgatctgcccaccatggcctcccaaattgctgg 30
Query: 243 aatttcaggtgtgagccac 261
||| |||| |||||||||
Sbjct: 29 gattacaggcgtgagccac 11
>RF00017;Metazoa_SRP;ABGA01300832.1/5264-5545 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 149 bits (75), Expect = 6e-35
Identities = 216/263 (82%), Gaps = 4/263 (1%)
Strand = Plus / Minus
Query: 1 ttcactcttattacccaggctagagtccaatggtgcgatcttggctcactgcaaactctg 60
||||||||| || |||||||| |||| |||||| || |||| |||||| |||| |||||
Sbjct: 271 ttcactcttgttgcccaggctggagtgcaatggcgcaatctcagctcaccgcaacctctg 212
Query: 61 cctcctgggttcaagcgattctcctg--tcagcctcccaagtagctgggattacaggcac 118
|||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||
Sbjct: 211 cctcctgggttcaagcaattatcctgcctcagcctcctgagtagctgggattacaggcat 152
Query: 119 tcgccaccacacccagctannnnnnngtatttttantagagacggggtttcatcatgttg 178
| |||||| || |||| |||||||| ||||||| ||||||| |||||||
Sbjct: 151 gcaccaccatgcctggcta--attttgtatttttggtagagacagggtttctccatgttg 94
Query: 179 gccaggctggtctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtg 238
| |||| ||||||| |||||| ||| ||||| |||||||| |||| |||||||||||||
Sbjct: 93 gtcaggatggtctcgaactcccgacctcaggtgatccacctgcctcagcctcccaaagtg 34
Query: 239 ctggaatttcaggtgtgagccac 261
||| ||| ||||||||||||||
Sbjct: 33 ttgggattacaggtgtgagccac 11
Score = 65.9 bits (33), Expect = 7e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgaggca 401
|||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 9 cggtggctcacacctgtaatcccaacactttgggaggctgaggca 53
>RF00017;Metazoa_SRP;AADA01136239.1/13356-13073 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 149 bits (75), Expect = 6e-35
Identities = 199/239 (83%), Gaps = 4/239 (1%)
Strand = Plus / Minus
Query: 28 caatggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg- 86
|||||| | |||||||||||||||||| ||||||||||| |||| |||| ||| |||||
Sbjct: 246 caatggcgtgatcttggctcactgcaacctctgcctcctaggtttaagcaattttcctgc 187
Query: 87 -tcagcctcccaagtagctgggattacaggcactcgccaccacacccagctannnnnnng 145
||||||||| |||||||||||||||||| || | ||||||| |||||||| |
Sbjct: 186 ctcagcctcctgagtagctgggattacaggtacgcaccaccacgcccagcta-atttttg 128
Query: 146 tattt-ttantagagacggggtttcatcatgttggccaggctggtctcaaactcctgacg 204
||||| ||| |||||||||||||||| || |||| || ||||||||| |||||| ||
Sbjct: 127 tatttcttagtagagacggggtttcaccacattggtcatgctggtctcgaactcccaacc 68
Query: 205 tcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtgagccactg 263
||||| ||||||||| ||| |||||||||||||||||| ||| |||| || ||||||||
Sbjct: 67 tcaggtgatccacccacctcggcctcccaaagtgctgggattacaggcgttagccactg 9
>RF00017;Metazoa_SRP;AACZ02094252.1/1604-1885 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 149 bits (75), Expect = 6e-35
Identities = 206/250 (82%), Gaps = 4/250 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||| | |||| || |||||||||||| ||||||||||| |||||||||||||||| |
Sbjct: 258 cccaggttggagtgcagtggtgcgatcttagctcactgcaacctctgcctcctgggttta 199
Query: 74 agcgattctcctgtc--agcctcccaagtagctgggattacaggcactcgccaccacacc 131
||||||||||| ||| ||||||| ||||||||||| |||||||| |||| ||| ||
Sbjct: 198 agcgattctcccgtctcagcctcctgagtagctgggaccacaggcacgtgccatcacgcc 139
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||| || ||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct: 138 tggctaattttt--taattttagtagagacaggggttcatcatgttggccaggctggtct 81
Query: 192 caaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcagg 251
|||||||||||||| ||||||| ||| ||| ||||||||||||| ||| ||| ||||
Sbjct: 80 tgaactcctgacgtcaagcgatccgcccacctcagcctcccaaagtgttgggattacagg 21
Query: 252 tgtgagccac 261
|| ||||||
Sbjct: 20 cgtaagccac 11
Score = 63.9 bits (32), Expect = 3e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||| |||||||| | ||||||||||||||||||||| ||||||||||
Sbjct: 4 gggcgcggtggcttacgcctgtaatcccaacactttgggaggctgagg 51
>RF00017;Metazoa_SRP;AACZ02168225.1/14114-13831 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 149 bits (75), Expect = 6e-35
Identities = 187/226 (82%), Gaps = 2/226 (0%)
Strand = Plus / Minus
Query: 38 atcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcc 95
|||| |||||||||||| ||||||||||| |||||||| ||||||||| |||||||||
Sbjct: 236 atctcggctcactgcaacctctgcctcctaagttcaagccattctcctgcctcagcctcc 177
Query: 96 caagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttant 155
||||||||||||||| ||| | |||||||| |||||||| |||||| |
Sbjct: 176 tgagtagctgggattacgggcgcctgccaccactcccagctaatttttgtattttttagt 117
Query: 156 agagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcc 215
||||| |||||||| |||||||||||||||||||| |||||||||| |||| |||||
Sbjct: 116 agagatggggtttcgccatgttggccaggctggtctggaactcctgacctcagatgatcc 57
Query: 216 acccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
||| ||| |||||||||||||||||| ||| |||| |||||||||
Sbjct: 56 gcccacctcggcctcccaaagtgctgggattacaggagtgagccac 11
Score = 48.1 bits (24), Expect = 2e-04
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||| |||||||||| |||||||||||| ||||||| ||||| ||||
Sbjct: 4 gggcgcggtggctcactcctgtaatcccagcactttgggaggccgagg 51
>RF00017;Metazoa_SRP;AADB02020364.1/19745-19464 9606:Homo sapiens
(human)
Length = 282
Score = 149 bits (75), Expect = 6e-35
Identities = 190/227 (83%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 37 gatcttggctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctc 94
||||| ||||||||||| ||| |||||| ||||||||| |||| | || ||||||||
Sbjct: 235 gatctgggctcactgcagcctccgcctcccgggttcaagtgatttttgtgcctcagcctc 176
Query: 95 ccaagtagctgggattacaggcactcgccaccacacccagctannnnnnngtatttttan 154
||||||||||||||||| ||||| | ||| |||||| |||| ||||||| |
Sbjct: 175 ccaagtagctgggattataggcatccaccaagacacccggctaatgttt-gtatttt-ag 118
Query: 155 tagagacggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatc 214
|||||||||||||||| ||||||||||||||||||||| ||||||| || ||||| ||||
Sbjct: 117 tagagacggggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatc 58
Query: 215 cacccgccttggcctcccaaagtgctggaatttcaggtgtgagccac 261
|||| |||| |||||||||||||||||| ||| |||| |||||||||
Sbjct: 57 cacctgcctcggcctcccaaagtgctgggattacaggcgtgagccac 11
Score = 58.0 bits (29), Expect = 2e-07
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 358 ggtggctcaggcctgtaatcccaacactttgagaggctgaggcaagaggattacttgtgg 417
||||||||| ||||||||||||| ||||||| ||||| |||||| | |||| || || ||
Sbjct: 10 ggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcacctgagg 69
Query: 418 caaggggctggagaccagcctggacaaca 446
||| | | ||||||||||||| |||||
Sbjct: 70 ttaggagttcgagaccagcctggccaaca 98
>RF00017;Metazoa_SRP;AADC01090898.1/43314-43618 9606:Homo sapiens
(human)
Length = 305
Score = 149 bits (75), Expect = 6e-35
Identities = 200/242 (82%), Gaps = 3/242 (1%)
Strand = Plus / Minus
Query: 23 gagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttcaagcgattct 82
|||| |||||| |||||| |||||||||||| ||||||||||||||||||||| |||||
Sbjct: 252 gagtgcaatggcacgatctcggctcactgcaacctctgcctcctgggttcaagccattct 193
Query: 83 cctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacccagctannn 140
|||| ||||||||| ||||||||||||||||||| | ||||| |||||| |
Sbjct: 192 cctgtctcagcctcctgagtagctgggattacaggcgtgcaccaccgtgcccagcaaatt 133
Query: 141 nnnngtatttttantagaga-cggggtttcatcatgttggccaggctggtctcaaactcc 199
||||||||| || ||| ||||||||| || |||||||||||||||||| |||||
Sbjct: 132 ttttgtatttttagtaaagatgggggtttcaccacgttggccaggctggtctcgaactct 73
Query: 200 tgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcaggtgtgagcc 259
|||| ||| | ||||||||| ||| ||||||||||||||||||||| |||| ||||||
Sbjct: 72 tgacctcaagtgatccacccacctctgcctcccaaagtgctggaattacaggcatgagcc 13
Query: 260 ac 261
||
Sbjct: 12 ac 11
>RF00017;Metazoa_SRP;ABBA01074506.1/131712-131995 9606:Homo sapiens
(human)
Length = 284
Score = 149 bits (75), Expect = 6e-35
Identities = 204/246 (82%), Gaps = 4/246 (1%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||| || ||| ||||||||||||| | |||||||||||| |
Sbjct: 260 cccaggctggagttcagtggcgccatcctggctcactgcaactttggcctcctgggttta 201
Query: 74 agcgattctcctg--tcagcctcccaagtagctgggattacaggcactcgccaccacacc 131
||| ||||||||| ||||||||| ||||||||||||||||||||| | | ||||||||
Sbjct: 200 agcaattctcctgactcagcctcctgagtagctgggattacaggcacccacaaccacacc 141
Query: 132 cagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctggtct 191
|||| |||||||| |||||||||||||||| ||||||||||||| ||||||
Sbjct: 140 tggctaatttttt-tatttttagtagagacggggtttcaccatgttggccaggttggtct 82
Query: 192 caaac-tcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttcag 250
||| ||||||| ||| | ||||||||| |||||||||||||||||||||| ||| |||
Sbjct: 81 tgaacttcctgacctcaagtgatccacccaccttggcctcccaaagtgctgggattacag 22
Query: 251 gtgtga 256
| ||||
Sbjct: 21 gcgtga 16
>RF00017;Metazoa_SRP;ABBA01031768.1/44728-45012 9606:Homo sapiens
(human)
Length = 285
Score = 149 bits (75), Expect = 6e-35
Identities = 215/259 (83%), Gaps = 5/259 (1%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || ||||| ||||| || |||||||| |||| ||| ||||||||
Sbjct: 262 acccaggctggagtgcagtggtgtgatctcagcacactgcaacctctaccttctgggttc 203
Query: 73 aagcgattctcctg--tcagcctccca-agtagctgggattaca-ggcactcgccaccac 128
|||| |||| ||| |||||||||| |||||||||||||||| |||| ||||||||
Sbjct: 202 aagcaattcctctgcctcagcctccctgagtagctgggattacaaggcatccgccaccag 143
Query: 129 acccagctannnnnnngtatttttantagagacggggtttcatcatgttggccaggctgg 188
|||||||| ||||||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 142 gcccagctaattttt-gtatttttagtagagacgaggtttcaccatgttggccaggctgg 84
Query: 189 tctcaaactcctgacgtcaggcgatccacccgccttggcctcccaaagtgctggaatttc 248
||||||||||||||| ||| | |||||||||| || ||||||||||||| || | ||| |
Sbjct: 83 tctcaaactcctgacctcaagtgatccacccgtctcggcctcccaaagtcctaggattac 24
Query: 249 aggtgtgagccactgtgcc 267
||| |||||||| |||||
Sbjct: 23 aggcatgagccaccgtgcc 5
Score = 46.1 bits (23), Expect = 6e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 352 gggcacggtggctcaggcctgtaatcc 378
||||||||||||||| |||||||||||
Sbjct: 4 gggcacggtggctcatgcctgtaatcc 30
