miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00897;mir-675;AF214115.1/794-866 230844:Peromyscus maniculatus
bairdii (prairie deer mouse)
Length = 73
Score = 79.8 bits (40), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 4 cccanggactggtgcggaaagggcccncantggact-tggtgcactgtatgccctaaccg 62
|||| ||||||| ||||||||||||| || ||||| | |||||||||||||||||||||
Sbjct: 1 cccaaggactggcgcggaaagggcccacagtggacgcttgtgcactgtatgccctaaccg 60
Query: 63 ctcagtccctggg 75
||||| |||||||
Sbjct: 61 ctcagcccctggg 73
>RF00897;mir-675;AAKN02038607.1/34464-34536 10141:Cavia porcellus
(domestic guinea pig)
Length = 73
Score = 77.8 bits (39), Expect = 2e-14
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 12 ctggtgcggaaagggcccncantggacttggtg-cactgtatgccctaaccgctcagtcc 70
|||| ||||| ||||||| || ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 9 ctggcgcggagagggcccacagtggacttggtgacactgtatgccctaaccgctcagccc 68
Query: 71 ctggg 75
|||||
Sbjct: 69 ctggg 73
