miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00897;mir-675;AAKN02038607.1/34464-34536 10141:Cavia porcellus
(domestic guinea pig)
Length = 73
Score = 67.9 bits (34), Expect = 1e-11
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 20 gggcccacagtggacttggtg-cactgtgtgccctaaccgctcagtccct 68
||||||||||||||||||||| |||||| |||||||||||||||| ||||
Sbjct: 21 gggcccacagtggacttggtgacactgtatgccctaaccgctcagcccct 70
>RF00897;mir-675;AF214115.1/794-866 230844:Peromyscus maniculatus
bairdii (prairie deer mouse)
Length = 73
Score = 60.0 bits (30), Expect = 4e-09
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 4 ggactggtgcggaaaggggcccacagtggact-tggtgcactgtgtgccctaaccgctca 62
||||||| |||||||||| |||||||||||| | ||||||||| |||||||||||||||
Sbjct: 6 ggactggcgcggaaaggg-cccacagtggacgcttgtgcactgtatgccctaaccgctca 64
Query: 63 gtccct 68
| ||||
Sbjct: 65 gcccct 70
