miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00897;mir-675;AF214115.1/794-866 230844:Peromyscus maniculatus
          bairdii (prairie deer mouse)
          Length = 73

 Score = 54.0 bits (27), Expect = 2e-07
 Identities = 44/49 (89%), Gaps = 3/49 (6%)
 Strand = Plus / Plus

                                                           
Query: 19 gaaagggcccacagtga---ctggtgcactgtatgccctaaccgctcag 64
          ||||||||||||||||    || ||||||||||||||||||||||||||
Sbjct: 17 gaaagggcccacagtggacgcttgtgcactgtatgccctaaccgctcag 65




>RF00897;mir-675;AAKN02038607.1/34464-34536 10141:Cavia porcellus
          (domestic guinea pig)
          Length = 73

 Score = 46.1 bits (23), Expect = 6e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 42 cactgtatgccctaaccgctcag 64
          |||||||||||||||||||||||
Sbjct: 43 cactgtatgccctaaccgctcag 65