miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 109 bits (55), Expect = 6e-24
Identities = 77/83 (92%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 4 tcctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcat 62
||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||| |||||
Sbjct: 86 tcctccgtttcaaaatagatgactcaactttgtactaactttagtacaaagttgggtcat 27
Query: 63 ctattttggaacggagggagtac 85
||||||||||||||| |||||||
Sbjct: 26 ctattttggaacggaaggagtac 4
Score = 93.7 bits (47), Expect = 4e-19
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 7 tccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatcta 65
|||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||
Sbjct: 12 tccgttccaaaatagatgacccaactttgtactaaagttagtacaaagttgagtcatcta 71
Query: 66 ttttggaacggagggagta 84
||||| |||||||| ||||
Sbjct: 72 ttttgaaacggaggaagta 90
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 105 bits (53), Expect = 1e-22
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
|||||||||||||||| ||||||||||||||||||||| ||||| ||| ||| ||||||
Sbjct: 10 cctccgttccaaaatagatgactcaactttgtactaactttagtgtaaagttgggtcatc 69
Query: 64 tattttggaacggagggagta 84
|||||||||||||||||||||
Sbjct: 70 tattttggaacggagggagta 90
Score = 97.6 bits (49), Expect = 2e-20
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
|||||||||||||||| ||||| ||||||| ||||| |||||||||| ||||||||||
Sbjct: 85 cctccgttccaaaatagatgacccaactttacactaaagttagtacaaagttgagtcatc 26
Query: 64 tattttggaacggagggagta 84
|||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagta 5
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 103 bits (52), Expect = 4e-22
Identities = 77/84 (91%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||| |||||||||| ||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 85 cctccattccaaaatagatgactcaactttgtactaactttagtacaaagttgggtcatc 26
Query: 64 tattttggaacggagggagtactt 87
|||||||||| ||||| |||||||
Sbjct: 25 tattttggaatggaggaagtactt 2
Score = 99.6 bits (50), Expect = 6e-21
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 4 tcctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcat 62
|||||| |||||||||| ||||| |||||||||||||| |||||||||| |||||||||
Sbjct: 9 tcctccattccaaaatagatgacccaactttgtactaaagttagtacaaagttgagtcat 68
Query: 63 ctattttggaacggagggagta 84
||||||||||| ||||||||||
Sbjct: 69 ctattttggaatggagggagta 90
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 85.7 bits (43), Expect = 9e-17
Identities = 81/96 (84%), Gaps = 12/96 (12%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaact------------tagtacaaa 52
||||||||| |||||| |||||||||||||||||||||| |||||||||
Sbjct: 96 cctccgttctaaaatagatgactcaactttgtactaactatagtacaaaattagtacaaa 37
Query: 53 attgagtcatctattttggaacggagggagtacttc 88
|||||||||||||||||||||||||||||||||||
Sbjct: 36 gttgagtcatctattttggaacggagggagtacttc 1
Score = 69.9 bits (35), Expect = 5e-12
Identities = 76/92 (82%), Gaps = 12/92 (13%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaactt------------agtacaaa 52
|||||||||||||||| |||||||||||||||||||| || ||||||||
Sbjct: 10 cctccgttccaaaatagatgactcaactttgtactaattttgtactatagttagtacaaa 69
Query: 53 attgagtcatctattttggaacggagggagta 84
|||||||||||||||| ||||||||||||||
Sbjct: 70 gttgagtcatctattttagaacggagggagta 101
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 79.8 bits (40), Expect = 6e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 14 caaaatacatgactcaactttgtactaact-tagtacaaaattgagtcatctattttgga 72
||||||| |||||||||||||||||||| ||||||||| ||||||| |||||||| ||
Sbjct: 19 caaaatagatgactcaactttgtactaaagatagtacaaagttgagtcgtctattttaga 78
Query: 73 acggagggagta 84
||||||||||||
Sbjct: 79 acggagggagta 90
Score = 77.8 bits (39), Expect = 2e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaactt-agtacaaaattgagtcatc 63
||||||||| |||||| | ||||||||||||||||| ||| |||||||| ||||||||||
Sbjct: 85 cctccgttctaaaatagacgactcaactttgtactatctttagtacaaagttgagtcatc 26
Query: 64 tattttg 70
|||||||
Sbjct: 25 tattttg 19
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 73.8 bits (37), Expect = 3e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 43 ttagtacaaaattgagtcatctattttggaacggagggagtactt 87
|||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 46 ttagtataaagttgagtcatctattttggaacggagggagtactt 2
Score = 63.9 bits (32), Expect = 3e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaactt 44
|||||||||||||||| ||||||||||||| |||||||||
Sbjct: 10 cctccgttccaaaatagatgactcaactttatactaactt 49
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 67.9 bits (34), Expect = 2e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 24 gactcaactttgtactaactt-agtacaaaattgagtcatctattttggaacggagggag 82
|||||||||||| |||||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct: 39 gactcaactttgcactaactttagtacaaagttgagtcacttattttgggacggagggag 98
Query: 83 ta 84
||
Sbjct: 99 ta 100
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaa 41
||||||| |||||||| |||||||||||||||||||
Sbjct: 95 cctccgtcccaaaataagtgactcaactttgtactaa 59
>RF00906;MIR1122;DQ154924.1/3536-3603 4571:Triticum turgidum
Length = 68
Score = 65.9 bits (33), Expect = 8e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 44 tagtacaaaattgagtcatctattttggaacggagggagta 84
||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 24 tagtacaaagttgggtcatctattttggaacggagggagta 64
Score = 56.0 bits (28), Expect = 8e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtacta 40
|||||||||||||||| ||||| |||||||||||||
Sbjct: 59 cctccgttccaaaatagatgacccaactttgtacta 24
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 63 ctattttggaacggagggagta 84
||||||||||||||||||||||
Sbjct: 26 ctattttggaacggagggagta 5
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 65.9 bits (33), Expect = 8e-11
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||| ||||| || |||||||||||| ||||||| |||||||||| ||||||||
Sbjct: 85 cctccgtcccaaattaagtgactcaactttatactaactttagtacaaagttgagtcact 26
Query: 64 tattttggaacggagggagta 84
|||||||| || |||||||||
Sbjct: 25 tattttgggacagagggagta 5
Score = 63.9 bits (32), Expect = 3e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 13 ccaaaatacatgactcaactttgtact-aacttagtacaaaattgagtcatctattttgg 71
|||||||| ||||||||||||||||| || |||||| ||| |||||||| || |||||
Sbjct: 18 ccaaaataagtgactcaactttgtactaaagttagtataaagttgagtcacttaatttgg 77
Query: 72 aacggagggagtactt 87
|||||||||||||||
Sbjct: 78 gacggagggagtactt 93
>RF00906;MIR1122;U76215.1/3218-3297 4565:Triticum aestivum (bread
wheat)
Length = 80
Score = 63.9 bits (32), Expect = 3e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 49 caaaattgagtcatctattttggaacggagggagta 84
|||| |||||||||||||||||||||||||||||||
Sbjct: 40 caaagttgagtcatctattttggaacggagggagta 5
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 49 caaaattgagtcatctattttggaacggagggagt 83
|||| ||||||||||||||||||||||||||||||
Sbjct: 41 caaagttgagtcatctattttggaacggagggagt 75
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttg 35
|||||||||||||||| ||||||||||||||
Sbjct: 10 cctccgttccaaaatagatgactcaactttg 40
>RF00906;MIR1122;FJ436986.1/109208-109327 37682:Aegilops tauschii
Length = 120
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 47 tacaaaattgagtcatctattttggaacggagggagtactt 87
|||||| ||| |||||||||||||||||||| |||||||||
Sbjct: 42 tacaaagttgggtcatctattttggaacggaaggagtactt 2
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 7 tccgttccaaaatacatgactcaactttgtactaactt 44
|||||||||||||| ||||| |||||||||| ||||||
Sbjct: 12 tccgttccaaaatagatgacccaactttgtattaactt 49
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 47 tacaaaattgagtcatctattttggaacggagggagtact 86
|||||| ||| ||||||||||||| |||||| ||||||||
Sbjct: 79 tacaaagttgggtcatctattttgaaacggaaggagtact 118
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaacttagtac 49
||||||| |||||||| |||||||||||||||||||||| ||||
Sbjct: 10 cctccgtcccaaaataagtgactcaactttgtactaactttgtac 54
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 43 ttagtacaaaattgagtcatctattttggaacggagggagta 84
|||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 46 ttagtacaaagttgagtcacttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 13 ccaaaatacatgactcaactttgtactaactt 44
|||||||| ||||||||||||||||||||||
Sbjct: 115 ccaaaataagtgactcaactttgtactaactt 84
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 52.0 bits (26), Expect = 1e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 28 caactttgtactaac-ttagtacaaaattgagtcatctattttggaacggagggagta 84
|||||||||||||| |||||||||| ||||| || |||||||| ||||||||||||
Sbjct: 92 caactttgtactaaagttagtacaaacttgagacagttattttgggacggagggagta 149
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 52.0 bits (26), Expect = 1e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 28 caactttgtacta-acttagtacaaaattgagtcatctattttggaacggagggagta 84
||||||||||||| | ||||||||| ||||| ||| ||||||| |||||||||||||
Sbjct: 44 caactttgtactagagctagtacaaagttgagacatttattttgaaacggagggagta 101
Score = 50.1 bits (25), Expect = 5e-06
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaact-tagtacaaa 52
|||||||| ||||||| ||| ||||||||||||||| || |||||||||
Sbjct: 96 cctccgtttcaaaataaatgtctcaactttgtactagctctagtacaaa 48
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 52.0 bits (26), Expect = 1e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 28 caactttgtacta-acttagtacaaaattgagtcatctattttggaacggagggagta 84
||||||||||||| | ||||||||| ||||| || |||||||||||||||||||||
Sbjct: 62 caactttgtactagagctagtacaaatttgagacacttattttggaacggagggagta 5
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 52.0 bits (26), Expect = 1e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 28 caactttgtactaac-ttagtacaaaattgagtcatctattttggaacggagggagta 84
|||||||||||||| ||| |||||| ||||| ||| |||||||| ||||||||||||
Sbjct: 44 caactttgtactaaagttaatacaaagttgagacatttattttgggacggagggagta 101
Score = 50.1 bits (25), Expect = 5e-06
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaa 52
||||||| |||||||| ||| |||||||||||| |||| ||||||||||
Sbjct: 96 cctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaa 48
>RF00906;MIR1122;AY465427.2/1983-1848 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 136
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 57 agtcatctattttggaacggagggagtac 85
||||| |||||||||||||||||||||||
Sbjct: 32 agtcaactattttggaacggagggagtac 4
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 50.1 bits (25), Expect = 5e-06
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaact-tagtacaaaattg 56
||||||| |||||||| || ||||||||||||||| || |||||||||||||
Sbjct: 96 cctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaattg 44
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 44 tagtacaaaattgagtcatctattttggaacggagggagtac 85
||||||||| ||||| || |||||||| |||||||||||||
Sbjct: 61 tagtacaaagttgagacagttattttgggacggagggagtac 102
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 13 ccaaaatacatgactcaactttgtactaactt 44
|||||||| ||||||||||||||||||||||
Sbjct: 84 ccaaaataagtgactcaactttgtactaactt 53
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 6 ctccgttccaaaatacatgactcaactttgtactaactt 44
|||||| ||||| || ||||||||||||||||||||||
Sbjct: 11 ctccgtcccaaagtaagtgactcaactttgtactaactt 49
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaact-tagtacaaaatt 55
||||||| |||||||| || ||||||||||||||| || ||||||||||||
Sbjct: 96 cctccgtcccaaaataagtgtctcaactttgtactagctgtagtacaaaatt 45
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaactt 44
||||||| |||||||| ||| |||||||||||| ||||||
Sbjct: 96 cctccgtcccaaaataaatgtctcaactttgtattaactt 57
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 47 tacaaaattgagtcatctattttggaacggagggagta 84
|||||| ||||| ||| |||||||| ||||||||||||
Sbjct: 64 tacaaagttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;EU379326.1/1838-1972 269377:Poa palustris
Length = 135
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 57 agtcatctattttggaacggagggagta 84
||||||||| ||||||||||||||||||
Sbjct: 32 agtcatctaatttggaacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 tcatctattttggaacggagggagta 84
||||||| ||||||||||||||||||
Sbjct: 106 tcatctaatttggaacggagggagta 131
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 46.1 bits (23), Expect = 8e-05
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 28 caactttgtactaac-ttagtacaaaattgagtcatctattttggaacggagggagtac 85
|||||||||||||| |||||||||| || || || |||||||| |||||||||||||
Sbjct: 44 caactttgtactaaagttagtacaaagttaagacacttattttgggacggagggagtac 102
>RF00906;MIR1122;EU730897.1/62277-62172 15368:Brachypodium
distachyon
Length = 106
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 tttgtactaacttagtacaaaat 54
|||||||||||||||||||||||
Sbjct: 49 tttgtactaacttagtacaaaat 71
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 43 ttagtacaaaattgagtcatctattttggaacggagggagta 84
|||||||||| |||||||| ||||| || ||||||||||||
Sbjct: 62 ttagtacaaagttgagtcacttatttcgggacggagggagta 103
>RF00906;MIR1122;EU660894.1/143713-143848 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 136
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 tattttggaacggagggagtac 85
||||||||||||||||||||||
Sbjct: 112 tattttggaacggagggagtac 133
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 44.1 bits (22), Expect = 3e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 25 actcaactttgtactaac-ttagtacaaaattgagtca 61
|||||||||||||||||| ||||||| || ||||||||
Sbjct: 41 actcaactttgtactaactttagtacgaagttgagtca 78
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 115
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atgactcaactttgtactaacttagt 47
|||||||||||||||||||| |||||
Sbjct: 38 atgactcaactttgtactaagttagt 63
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 37 actaacttagtacaaaattgagtcat 62
|||||||||||||||| |||||||||
Sbjct: 63 actaacttagtacaaagttgagtcat 38
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 4 tcctccgttccaaaatacatgactcaactttgtacta-acttagtacaaaattg 56
|||||||| |||||||| || |||||||||||| || | ||||||||||||||
Sbjct: 97 tcctccgtcccaaaataactgtctcaactttgtattagatttagtacaaaattg 44
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 44.1 bits (22), Expect = 3e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 32 tttgtactaacttagtac-aaaattgagtcatctattttggaacggagggagta 84
|||||||||||||||||| ||| ||| | || |||||||| ||||||||||||
Sbjct: 58 tttgtactaacttagtactaaatttgcgacacttattttgggacggagggagta 5
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 28 caactttgtact-aacttagtacaaaattgagtcatctattttggaacggagggagta 84
|||||||||||| || |||||||||| ||||| || |||||||| | ||||||||||
Sbjct: 51 caactttgtactaaagttagtacaaagttgagacacttattttgggatggagggagta 108
>RF00906;MIR1122;AAAA02002393.1/9285-9146 39946:Oryza sativa
Indica Group
Length = 140
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 66 ttttggaacggagggagtactt 87
||||||||||||||||||||||
Sbjct: 23 ttttggaacggagggagtactt 2
