miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 155 bits (78), Expect = 2e-37
Identities = 90/94 (95%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 111 tactccctccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagtt 52
Query: 70 ctagatacatccatttctgcggggagtaatttgg 103
||||||||||||||||| ||| |||||||||||
Sbjct: 51 ctagatacatccatttcagcgacgagtaatttgg 18
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 127 bits (64), Expect = 4e-29
Identities = 94/103 (91%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 14 ccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagttctag 73
||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 9 ccctccgttccga-ttacttgtctcacatatggatgtatctagatgtattttagttctag 67
Query: 74 atacatccatttctgcggggagtaatttggaacanagggagta 116
||||||||||||| ||| |||||||||||||| ||||||||
Sbjct: 68 atacatccatttcagcgacgagtaatttggaacggagggagta 110
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctaga 57
||||||||||||||| ||||||| ||||| | |||||||||||||||
Sbjct: 110 tactccctccgttccaaattactcgtcgctgaaatggatgtatctaga 63
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 123 bits (62), Expect = 6e-28
Identities = 94/105 (89%)
Strand = Plus / Plus
Query: 13 tccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagttcta 72
|||||||||||||||||||| ||| | ||||||||||||||||||||||||||| ||
Sbjct: 8 tccctccgttccgaattactcgtccaataaatggatgtatctagatgtattttagttata 67
Query: 73 gatacatccatttctgcggggagtaatttggaacanagggagtac 117
|||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 68 gatacatccatttctgcgacgagtaatttggaacggagggagtac 112
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatcta 55
||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 111 tactccctccgttccaaattactcgtcgcagaaatggatgtatcta 66
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 123 bits (62), Expect = 6e-28
Identities = 94/105 (89%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttctgaattactcgtcgcagaaatggatgtatctagatgtattttagtt 64
Query: 70 ctagatacatccatttctgcggggagtaatttggaacanagggag 114
|||||| ||||||||||| | |||||||||||||| ||||||
Sbjct: 65 ttagatatatccatttctgagacgagtaatttggaacggagggag 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 85/105 (80%)
Strand = Plus / Minus
Query: 12 ctccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagttct 71
||||||||||||| ||||||| ||| ||| |||||| |||||| | || || |||
Sbjct: 109 ctccctccgttccaaattactcgtctcagaaatggatatatctaaaactaaaatacatct 50
Query: 72 agatacatccatttctgcggggagtaatttggaacanagggagta 116
||||||||||||||||||| |||||||| |||| ||||||||
Sbjct: 49 agatacatccatttctgcgacgagtaattcagaacggagggagta 5
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 119 bits (60), Expect = 9e-27
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 14 ccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagttctag 73
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 107 ccctccgttccgaattacttgtcgcacttatggatgtatcaagatgtattttagttctag 48
Query: 74 atacatccattt 85
||||||||||||
Sbjct: 47 atacatccattt 36
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 103 bits (52), Expect = 5e-22
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
||||||||||||| ||||||| | ||||||| || ||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcgaattattcgtcgcagaaatagatgtatctagttgtattttagtt 64
Query: 70 ctagatacatccatttctgcggggagtaattt 101
|||||||||| |||||||||| |||||||||
Sbjct: 65 ctagatacattcatttctgcgacgagtaattt 96
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 103 bits (52), Expect = 5e-22
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 9 ttactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagt 68
||||||||| |||||||||||||||||| ||| |||| || ||| || ||||||||||||
Sbjct: 4 ttactcccttcgttccgaattacttgtcacagatatgaatatatataaatgtattttagt 63
Query: 69 tctagatacatccatttctgcggggagtaatttgga 104
|||||||| || |||||||||| ||||||||||||
Sbjct: 64 tctagatatattcatttctgcgacgagtaatttgga 99
Score = 89.7 bits (45), Expect = 8e-18
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatct 54
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tactccctccgttccgaattacttgtcgcaggtatggatgtatct 99
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 103 bits (52), Expect = 5e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||| | ||| ||||||||| || |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagtt 64
Query: 70 ctagatacatccattt 85
||||||||||||||||
Sbjct: 65 ctagatacatccattt 80
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 103 bits (52), Expect = 5e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||| | ||| ||||||||| || |||||||||||||||||||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagtt 62
Query: 70 ctagatacatccattt 85
||||||||||||||||
Sbjct: 61 ctagatacatccattt 46
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 103 bits (52), Expect = 5e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||||| |||||||||||| ||| ||||||||||||||| |||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtctcagaaatggatgtatctagacgtattttagtt 52
Query: 70 ctagatacatccattt 85
||||||| ||||||||
Sbjct: 51 ctagatagatccattt 36
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtc 36
|||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgttcggaattacttgtc 31
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 99.6 bits (50), Expect = 8e-21
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 9 ttactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagt 68
||||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||
Sbjct: 112 ttactccctccgttctgaattacttgtcgaaaaaatggatgtatctagacatattttagt 53
Query: 69 tctagatacatccatttctgcggggagtaatttggaacanagggagtac 117
||||||||||||||||| || | ||||||| ||||| |||||||||
Sbjct: 52 tctagatacatccatttttgagacaagtaattcggaacggagggagtac 4
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctaga 57
||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 5 tactccctccgttccgaattacttgtctcaaaaatggatgtatctaga 52
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 99.6 bits (50), Expect = 8e-21
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||| |||||| |||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 111 tactccatccgtttggaattacttgtcgcagaaatgaatgtatctagatgtattttagtt 52
Query: 70 ctagatacatccat 83
||||||||||||||
Sbjct: 51 ctagatacatccat 38
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||| ||| |||||||||||| | | |||||||||||||||| || || |
Sbjct: 5 tactccctccattcggaattacttgtctcggatatggatgtatctagaactaaaatacat 64
Query: 70 ctagatacatccatttctgcg 90
|||||||||| ||||||||||
Sbjct: 65 ctagatacattcatttctgcg 85
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 99.6 bits (50), Expect = 8e-21
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
||||||||| || ||||| |||||||||| | |||||||||||||||||||||| ||||
Sbjct: 5 tactccctctgtcccgaaatacttgtcgcggaaatggatgtatctagatgtatttcagtt 64
Query: 70 ctagatacatccatttct 87
||||||||||||||||||
Sbjct: 65 ctagatacatccatttct 82
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 95.6 bits (48), Expect = 1e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtcgcgaaaatggatgtatctagacgtattttagtt 52
Query: 70 ctagatacatccattt 85
||||||||||| ||||
Sbjct: 51 ctagatacatctattt 36
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 95.6 bits (48), Expect = 1e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
||||||| |||| | ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct: 5 tactcccgccgtccggaaatacttgtcataggaatggatgtatctagatgtattttagtt 64
Query: 70 ctagatacatccattt 85
||||||||||||||||
Sbjct: 65 ctagatacatccattt 80
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 93.7 bits (47), Expect = 5e-19
Identities = 86/99 (86%)
Strand = Plus / Minus
Query: 8 attactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttag 67
||||||| ||||||| ||||||| ||||| ||||||| |||||||||||| |||||||
Sbjct: 113 attactctctccgtttcgaattatttgtcataggtatgaatgtatctagatttattttaa 54
Query: 68 ttctagatacatccatttctgcggggagtaatttggaac 106
|||||||||||| ||||||||| ||||||||| ||||
Sbjct: 53 ttctagatacattcatttctgcaacgagtaatttagaac 15
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||| | |||||| ||||| || ||||||||||||||| |||||||||||
Sbjct: 121 tactccctccgtccggaattatttgtcatagaaatggatgtatctagacgtattttagtt 62
Query: 70 ctagatacatccatttct 87
||||||||||||||||||
Sbjct: 61 ctagatacatccatttct 44
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 87.7 bits (44), Expect = 3e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||| | ||||| |||||| || ||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagtt 64
Query: 70 ctagatacatccattt 85
||||||||||||||||
Sbjct: 65 ctagatacatccattt 80
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 83.8 bits (42), Expect = 5e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 13 tccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagttcta 72
||||||||||| ||||||||||||| || ||||||||||||||| | ||| |||||||
Sbjct: 8 tccctccgttcggaattacttgtcgtagaaatggatgtatctagacatttttcagttcta 67
Query: 73 gatacatccatttctgcg 90
||||||||||||| ||||
Sbjct: 68 gatacatccatttatgcg 85
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 17 tccgttccgaattacttgtcgcaggtatggatgtatctaga 57
||||||||||||||||||||||| |||||||||||||||
Sbjct: 104 tccgttccgaattacttgtcgcataaatggatgtatctaga 64
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 83.8 bits (42), Expect = 5e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||| ||| | ||| |||||||| | | |||||||||||||||||||||||||||
Sbjct: 5 tactcccttcgtccggaaatacttgtccaaagaatggatgtatctagatgtattttagtt 64
Query: 70 ctagatacatccatttct 87
|||||||||||||||||
Sbjct: 65 atagatacatccatttct 82
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 79.8 bits (40), Expect = 8e-15
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||||| |||||||| ||| || ||| |||||||||||||||||||| ||
Sbjct: 121 tactccctccgttcagaattactcgtccaagaaatgaatgtatctagatgtattttaatt 62
Query: 70 ctagatacatccattt 85
|||||||||||||||
Sbjct: 61 gtagatacatccattt 46
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 79.8 bits (40), Expect = 8e-15
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
||||||||| || | ||| |||||||| ||| ||||||||| ||||| |||||||||||
Sbjct: 121 tactccctctgtccggaaatacttgtcagaggaatggatgtacctagacgtattttagtt 62
Query: 70 ctagatacatccattt 85
||||||||||||||||
Sbjct: 61 ctagatacatccattt 46
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 79.8 bits (40), Expect = 8e-15
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||| | ||| ||||||||| || ||| || ||||||||||||||||| ||
Sbjct: 121 tactccctccgtccggaaatacttgtcggagaaatgaatctatctagatgtattttaatt 62
Query: 70 ctagatacatccattt 85
||||||||||||||||
Sbjct: 61 ctagatacatccattt 46
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 79.8 bits (40), Expect = 8e-15
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
||||||||| || | ||| || ||||| ||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtccggaaatatttgtcataggaatggatgtatctagatgtattttagtt 64
Query: 70 ctagatacatccattt 85
||||||| ||||||||
Sbjct: 65 ctagatatatccattt 80
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 73.8 bits (37), Expect = 5e-13
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatcta-gatgtattttagt 68
|||||||||||| | || |||||||| ||| ||||||||||| | |||||||||||||
Sbjct: 122 tactccctccgtccgaaaatacttgtccgaggaatggatgtatcaaagatgtattttagt 63
Query: 69 tctagatacatccattt 85
|||||||||||||||||
Sbjct: 62 tctagatacatccattt 46
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 25 gaattacttgtcgcaggtatggatgtatctagatgtattttagttctagatacatccatt 84
|||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||
Sbjct: 28 gaattacttgtcgcagaaatggatgtatctagacgagttttagttctagatacattcatt 87
Query: 85 t 85
|
Sbjct: 88 t 88
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 69 tctagatacatccatttctgcg 90
||||||||||||||||||||||
Sbjct: 60 tctagatacatccatttctgcg 39
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
||||||||| |||| ||||||| ||| || ||| |||||||||||||||||||||||
Sbjct: 111 tactccctctgttcgaaattactcgtccaagaaatgaatgtatctagatgtattttagtt 52
Query: 70 ctagatacatccattt 85
|||||||||||||||
Sbjct: 51 atagatacatccattt 36
Score = 48.1 bits (24), Expect = 3e-05
Identities = 86/107 (80%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||||| |||||||||||| | ||||||||||||| | || || |
Sbjct: 5 tactccctccgttcggaattacttgtcataaaaatggatgtatctataactaaaatacat 64
Query: 70 ctagatacatccatttctgcggggagtaatttggaacanagggagta 116
|||||||||| ||||||| | ||||||||| ||||| ||||||||
Sbjct: 65 ctagatacattcatttcttggacgagtaatttcgaacagagggagta 111
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 69.9 bits (35), Expect = 8e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 43 atggatgtatctagatgtattttagttctagatacatccattt 85
|||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 78 atggatatatctagatgtattttagttctagacacatccattt 36
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 69.9 bits (35), Expect = 8e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 43 atggatgtatctagatgtattttagttctagatacatccattt 85
|||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 38 atgggtgtatctagatgtattttagttctagatacattcattt 80
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 69.9 bits (35), Expect = 8e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 29 tacttgtcgcaggtatggatgtatctagatgtattttagttctagatacatccatttct 87
||||||||| | | ||||||||||||||||| |||||||||||| |||||| |||||||
Sbjct: 102 tacttgtcgaaagaatggatgtatctagatgcattttagttctaaatacattcatttct 44
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 69.9 bits (35), Expect = 8e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 45 ggatgtatctagatgtattttagttctagatacat 79
|||||||||||||||||||||||||||||||||||
Sbjct: 86 ggatgtatctagatgtattttagttctagatacat 52
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 69.9 bits (35), Expect = 8e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 43 atggatgtatctagatgtattttagttctagatacatccattt 85
||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 38 atggatgtatctagacgtattttacttctagatacatccattt 80
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 45 ggatgtatctagatgtattttagttctagataca 78
||||||||||||||||||||||||||||||||||
Sbjct: 86 ggatgtatctagatgtattttagttctagataca 53
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 14 ccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagttctag 73
|||||||||| |||||| ||||||| || ||| |||||||||||||||||||||||
Sbjct: 107 ccctccgttcggaattaattgtcgcgaaaatagatatatctagatgtattttagttctaa 48
Query: 74 atacatccatttc 86
|||| ||||||||
Sbjct: 47 atacgtccatttc 35
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 47 atgtatctagatgtattttagttctagatacat 79
|||||||||||||||||||||||||||||||||
Sbjct: 79 atgtatctagatgtattttagttctagatacat 47
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 45 ggatgtatctagatgtattttagttctagatacatcc 81
|||||||||||||||||||||||||||| ||||||||
Sbjct: 86 ggatgtatctagatgtattttagttctaaatacatcc 50
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 29 tacttgtcgcaggtatggatgtatctagatgtattttagttctagatacatccattt 85
|||||||| ||| ||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 102 tacttgtcataggaatgtatgtatctagatgtattataattctagatacatccattt 46
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 45 ggatgtatctagatgtattttagttctagatacatc 80
|||||||||||||||||||||||||||| |||||||
Sbjct: 61 ggatgtatctagatgtattttagttctacatacatc 96
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 63.9 bits (32), Expect = 5e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 gaattacttgtcgcaggtatggatgtatctagatgtatttt-agttctagatacatccat 83
|||||||||| |||| ||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 98 gaattacttgccgcaaaaatggatgtatctagacgcatttttagttctagatacatccat 39
Query: 84 ttct 87
||||
Sbjct: 38 ttct 35
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 6 caattactccctccgttccgaattacttgtc 36
|||||||||||||||||||||||||||||||
Sbjct: 1 caattactccctccgttccgaattacttgtc 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtc 36
||||||||||||||| |||||||||||
Sbjct: 131 tactccctccgttccaaattacttgtc 105
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 47 atgtatctagatgtattttagttctagatacatccattt 85
|||||||||||| |||||||||||||||||||| |||||
Sbjct: 84 atgtatctagatatattttagttctagatacattcattt 46
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacat 79
||||||||||||||||||||| ||||||||||||
Sbjct: 85 gatgtatctagatgtattttaattctagatacat 52
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||| | ||| |||||||| || ||| ||||||||||| ||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgtcctagagatgaatgtatctagacttattttagtt 61
Query: 70 ctagatacatcca 82
||||||||||||
Sbjct: 60 atagatacatcca 48
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||| |||||||||||||| |||||| |||||
Sbjct: 41 gatgtatctagacgtattttagttctaaatacattcattt 80
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 45 ggatgtatctagatgtattttagttctagata 76
|||||||| |||||||||||||||||||||||
Sbjct: 49 ggatgtatttagatgtattttagttctagata 80
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 45 ggatgtatctagatgtattttagttctagatacatc 80
||||||||||||| |||||||||||||||||||||
Sbjct: 50 ggatgtatctagacatattttagttctagatacatc 85
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum
(bread wheat)
Length = 124
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 47 atgtatctagatgtattttagttctagatacatccattt 85
|||||| |||| |||||||||||||| ||||||||||||
Sbjct: 84 atgtatttagacgtattttagttctacatacatccattt 46
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 47 atgtatctagatgtattttagttctagatacatccattt 85
||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 74 atgtatctagacgtatttcagtgctagatacatccattt 36
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 54.0 bits (27), Expect = 4e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 69
|||||||||||||| ||| |||||||| | ||| ||||||||||| ||||||||||
Sbjct: 120 tactccctccgttcggaaatacttgtcctaaaaatgaatgtatctagacttattttagtt 61
Query: 70 ctagatacatc 80
||||||||||
Sbjct: 60 atagatacatc 50
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 47 atgtatctagatgtattttagttctagatacatc 80
|||||| |||||||||||||||||||| ||||||
Sbjct: 84 atgtatatagatgtattttagttctaggtacatc 51
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 47 atgtatctagatgtattttagttctagatacatc 80
|||||||||||| |||||||||||||| ||||||
Sbjct: 84 atgtatctagatatattttagttctaggtacatc 51
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 43 atggatgtatctagatgtattttagttctagatacatccatt 84
||||||| ||||||| |||||||||| ||||||||||||||
Sbjct: 38 atggatgaatctagacttattttagttatagatacatccatt 79
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 46 gatgtatctagatgtattttagttctagatacatcc 81
||||||||||||||||| |||||| |||||| ||||
Sbjct: 51 gatgtatctagatgtatattagttttagatatatcc 86
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||| ||||||| || |||||||||||||||
Sbjct: 41 gatgtatctagacttattttacttatagatacatccattt 80
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 tactccctccgttccgaattacttgtc 36
|||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgttctgaattacttgtc 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtc 36
||||||||||||||| |||||||||||
Sbjct: 131 tactccctccgttccaaattacttgtc 105
>RF00906;MIR1122;AY465427.2/1983-1848 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 8 attactccctccgttccgaattacttg 34
||||||||||||||||| |||||||||
Sbjct: 134 attactccctccgttccaaattacttg 108
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 50 tatctagatgtattttagttctagatacatccatt 84
|||||||| |||||||||| ||||||||||||||
Sbjct: 80 tatctagacttattttagttatagatacatccatt 46
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 10 tactccctccgttccgaattacttgtcgca 39
|||||||||||||| ||| |||||||||||
Sbjct: 121 tactccctccgttcagaaatacttgtcgca 92
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 47 atgtatctagatgtattttagttctagatacatccatt 84
||||||||| || |||||||||| | ||||||||||||
Sbjct: 83 atgtatctaaatttattttagttatggatacatccatt 46
